NO06G01990, NO06G01990 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G01990 vs. NCBI_GenBank
Match: EWM26247.1 (RNA binding protein [Nannochloropsis gaditana]) HSP 1 Score: 326.6 bits (836), Expect = 1.200e-85 Identity = 185/297 (62.29%), Postives = 219/297 (73.74%), Query Frame = 0 Query: 1 MAVKKVKTKTKTMVLGTETGQKVSAKASELEARLAKMVDDNDGLSSXXXXXXXXXXXXXXXXXXKAQKALKTKSADFVALSAAVQEKLVAQALKQXXXXXXXXXXXXXXXXXGSKPNAVVYLGHIPHGFFEEQMKSFFSQFGGVKHVRLSRSKKTGKSRGYAFLEFDDAEVATVVAETMQGYYLGGRKLVCEVLPPTKVHPKLFVDADKKWRVIPWRQLEKDRRTAPKTEVEARKCLSRLVRGDKRKRRKLAAKGIEYEFPGYEATAAEAYVKRKKDDPAAAATAIKDVEKSEGKTG 298 MA+K K K ++ G G++ + + E+++RLAK V S+ + +T SADFVALS AV++K+ QA K XXXXXXX SKPN V+YLGH+PHGFFE+QM++FF QFG VKH+RLSRSKKTGKSRGYAFLEF +AEVA+VVAETMQGYYLGGRKLVCEVLPP++VHPKLF+DADKKWRVIPWRQLEKDRRTAPKTE EARKCLSRLVRGD RKR++LA GI+Y+FPGYEATA++AYVKRKKDD A A EKSEGK+G Sbjct: 1 MALKAKKPKDTSLDAG--GGKEKTGQKKEVDSRLAKPVKGVKKGSNDAEDRKSGAEGAIDGSTNSPPETFQTNSADFVALSDAVKKKMAIQAAKDQRKEGKAKARXXXXXXXASKPNTVIYLGHVPHGFFEDQMRAFFGQFGDVKHIRLSRSKKTGKSRGYAFLEFAEAEVASVVAETMQGYYLGGRKLVCEVLPPSRVHPKLFLDADKKWRVIPWRQLEKDRRTAPKTEEEARKCLSRLVRGDNRKRKRLAGLGIQYDFPGYEATASQAYVKRKKDDLAVEA------EKSEGKSG 289
BLAST of NO06G01990 vs. NCBI_GenBank
Match: XP_002116635.1 (hypothetical protein TRIADDRAFT_6541 [Trichoplax adhaerens] >EDV20991.1 hypothetical protein TRIADDRAFT_6541, partial [Trichoplax adhaerens]) HSP 1 Score: 170.6 bits (431), Expect = 1.100e-38 Identity = 76/145 (52.41%), Postives = 110/145 (75.86%), Query Frame = 0 Query: 119 VVYLGHIPHGFFEEQMKSFFSQFGGVKHVRLSRSKKTGKSRGYAFLEFDDAEVATVVAETMQGYYLGGRKLVCEVLPPTKVHPKLFVDADKKWRVIPWRQLEKDRRTAPKTEVEARKCLSRLVRGDKRKRRKLAAKGIEYEFPGY 264 V+Y+GHIPHGF+EE+MK FFSQFG + +RLSRSK++G+SRGYAF+EF + +VAT+VAETM Y + GR L C+++ VHP+ F A++K+R I WR+L K + APKT+ E K +++L++ + +R+KL GI+Y+FPGY Sbjct: 1 VIYVGHIPHGFYEEEMKGFFSQFGDINKIRLSRSKRSGRSRGYAFIEFSNQDVATIVAETMNNYMMCGRLLKCQLMKSESVHPETFKGANRKFRKINWRELAKKQANAPKTDQENTKVVNKLIKAENVRRKKLQKLGIDYQFPGY 145
BLAST of NO06G01990 vs. NCBI_GenBank
Match: KFH62370.1 (hypothetical protein MVEG_11579 [Mortierella verticillata NRRL 6337]) HSP 1 Score: 170.2 bits (430), Expect = 1.400e-38 Identity = 78/151 (51.66%), Postives = 113/151 (74.83%), Query Frame = 0 Query: 119 VVYLGHIPHGFFEEQMKSFFSQFGGVKHVRLSRSKKTGKSRGYAFLEFDDAEVATVVAETMQGYYLGGRKLVCEVLPPTKVHPKLFVDADKKWRVIPWRQLEKDRRTAPKTEVEARKCLSRLVRGDKRKRRKLAAKGIEYEFPGYEATAAE 270 VVYLG IPHGF+EEQM+++F+QFG V +RLSR+KKTGKS+ YAF+EF EVA +VA+TM Y L G +L C+ L P+++HP +FV A+KK++ IPW+++ KD+ A K+ + ++ +L++ + KR KLA GIEY+FPGY+A+ E Sbjct: 231 VVYLGRIPHGFYEEQMQAYFTQFGKVLRLRLSRNKKTGKSKHYAFIEFASQEVADIVADTMDNYLLFGHQLKCKALQPSQIHPAMFVGANKKFKAIPWQKISKDKHNADKSASQIKQVSKKLLKNESAKRAKLADLGIEYDFPGYKASVVE 381
BLAST of NO06G01990 vs. NCBI_GenBank
Match: XP_021885747.1 (hypothetical protein BCR41DRAFT_317809 [Lobosporangium transversale] >ORZ28044.1 hypothetical protein BCR41DRAFT_317809 [Lobosporangium transversale]) HSP 1 Score: 169.9 bits (429), Expect = 1.800e-38 Identity = 79/151 (52.32%), Postives = 112/151 (74.17%), Query Frame = 0 Query: 119 VVYLGHIPHGFFEEQMKSFFSQFGGVKHVRLSRSKKTGKSRGYAFLEFDDAEVATVVAETMQGYYLGGRKLVCEVLPPTKVHPKLFVDADKKWRVIPWRQLEKDRRTAPKTEVEARKCLSRLVRGDKRKRRKLAAKGIEYEFPGYEATAAE 270 VVYLG IPHGF+EEQMK++FSQFG V +RLSR+KKTGKS+ YAF+EF EVA +VA+TM Y L G +L C+ L P+++HP +F A+KK++ IPW ++ K++ A KT V++ + +L++ + KR KLA GI+Y+FPGY+A+ E Sbjct: 189 VVYLGRIPHGFYEEQMKAYFSQFGKVLRLRLSRNKKTGKSKHYAFIEFASQEVAEIVADTMNNYLLFGHQLKCKALQPSQIHPAMFSGANKKFKAIPWLKIAKEKHNAEKTTVQSNQIKKKLLKNEAAKRAKLAELGIDYDFPGYKASVPE 339
BLAST of NO06G01990 vs. NCBI_GenBank
Match: OAQ26284.1 (FHA domaininteracting nucleolar phospho protein putat [Mortierella elongata AG-77]) HSP 1 Score: 169.1 bits (427), Expect = 3.200e-38 Identity = 77/151 (50.99%), Postives = 111/151 (73.51%), Query Frame = 0 Query: 119 VVYLGHIPHGFFEEQMKSFFSQFGGVKHVRLSRSKKTGKSRGYAFLEFDDAEVATVVAETMQGYYLGGRKLVCEVLPPTKVHPKLFVDADKKWRVIPWRQLEKDRRTAPKTEVEARKCLSRLVRGDKRKRRKLAAKGIEYEFPGYEATAAE 270 VVYLG IPHGF+E+QM ++FSQFG V +RLSR+KKTGKS+ YAF+EF EVA +VA+TM Y L G +L C+ L PT++HP +F+ A+KK++ IPW+++ K++ A K+ + ++ +L++ + KR KLA GI+YEFPGY+A E Sbjct: 70 VVYLGRIPHGFYEDQMNAYFSQFGKVLRLRLSRNKKTGKSKHYAFIEFASQEVADIVADTMDNYLLFGHQLKCKALQPTQIHPAMFLGANKKFKAIPWQKISKEKHNAEKSAAQMKQVAKKLLKNESAKRAKLAELGIDYEFPGYKANIQE 220
BLAST of NO06G01990 vs. NCBI_GenBank
Match: OAJ32768.1 (hypothetical protein BDEG_28648 [Batrachochytrium dendrobatidis JEL423]) HSP 1 Score: 165.6 bits (418), Expect = 3.500e-37 Identity = 87/175 (49.71%), Postives = 117/175 (66.86%), Query Frame = 0 Query: 119 VVYLGHIPHGFFEEQMKSFFSQFGGVKHVRLSRSKKTGKSRGYAFLEFDDAEVATVVAETMQGYYLGGRKLVCEVLPPTKVHPKLFVDADKKWRVIPWRQLEKDRRTAPKTEVEARKCLSRLVRGDKRKRRKLAAKGIEYEFPGYEATAAEAYVKRKKDDPAAAATAIKDVEKSE 294 VVYLGHIPHGF+E +M S+FSQFG V +RLSR+KKTG S+ YAF+EF D EVA +VA+TM Y + R L C+V+ K+H F D+K+RVIPW +L++DR+ PKT E ++L + D +KR++L GI+YEFPGY AAE K AA+A K ++KS+ Sbjct: 185 VVYLGHIPHGFYEAEMLSYFSQFGEVTRLRLSRNKKTGHSKHYAFVEFKDIEVAKIVADTMDNYLMFNRMLKCKVVSADKLHADTFKGCDRKFRVIPWNKLQRDRQNKPKTAEEWDTIQTKLEKRDSKKRKQLEELGIDYEFPGYAGAAAERKAK-------LAASAEKTLKKSK 352
BLAST of NO06G01990 vs. NCBI_GenBank
Match: XP_002948783.1 (hypothetical protein VOLCADRAFT_80307 [Volvox carteri f. nagariensis] >EFJ50163.1 hypothetical protein VOLCADRAFT_80307 [Volvox carteri f. nagariensis]) HSP 1 Score: 164.9 bits (416), Expect = 5.900e-37 Identity = 74/144 (51.39%), Postives = 111/144 (77.08%), Query Frame = 0 Query: 119 VVYLGHIPHGFFEEQMKSFFSQFGGVKHVRLSRSKKTGKSRGYAFLEFDDAEVATVVAETMQGYYLGGRKLVCEVLPPTKVHPKLFVDADKKWRVIPWRQLEKDRRTAPKTEVEARKCLSRLVRGDKRKRRKLAAKGIEYEFPG 263 VVY+GH+PHGFFE+QM +FSQFG V +RLSRSKKTG ++GYAFLEF EVA V AE M GY+L ++L C+++PP++VHP+LF A+++++VIPWR++E+ R +T E + +++LVR DK++++K+ GI++E+ G Sbjct: 29 VVYVGHVPHGFFEKQMLGYFSQFGKVTRLRLSRSKKTGNAKGYAFLEFQYPEVARVAAEAMDGYFLFKQRLKCKLIPPSRVHPQLFQGANRRFKVIPWRRVERQRHDRERTPTEHAQRVAKLVRKDKQRQKKIKEAGIDFEYEG 172
BLAST of NO06G01990 vs. NCBI_GenBank
Match: XP_001637969.1 (predicted protein [Nematostella vectensis] >EDO45906.1 predicted protein [Nematostella vectensis]) HSP 1 Score: 164.9 bits (416), Expect = 5.900e-37 Identity = 81/160 (50.62%), Postives = 111/160 (69.38%), Query Frame = 0 Query: 119 VVYLGHIPHGFFEEQMKSFFSQFGGVKHVRLSRSKKTGKSRGYAFLEFDDAEVATVVAETMQGYYLGGRKLVCEVLPPTKVHPKLFVDADKKWRVIPWRQLEKDRRTAPKTEVEARKCLSRLVRGDKRKRRKLAAKGIEYEFPGYEATAAEAYVKRKKDD 279 V+YLGHIPHGFFE ++K FF QFG V +RLSRSKK+ +S+GYAF+EF EVA + A+TM Y + GR L C+V+P K+HP+L+ +++K+R +P RQ++ DR KT+ E K +S L++ + RKR+KL GI YEFPGY A E K K+ D Sbjct: 47 VIYLGHIPHGFFENEIKKFFEQFGTVNRIRLSRSKKSARSKGYAFVEFACDEVAKIAADTMHNYMMFGRLLKCKVVPNEKIHPRLWKGSNRKFRHVPRRQIDIDRHNKVKTQNEHEKQVSNLLKKETRKRKKLEKLGIPYEFPGYAGEAEETQPKHKRFD 206
BLAST of NO06G01990 vs. NCBI_GenBank
Match: CBJ48643.1 (RNA binding protein (ISS) [Ectocarpus siliculosus]) HSP 1 Score: 161.8 bits (408), Expect = 5.000e-36 Identity = 83/186 (44.62%), Postives = 120/186 (64.52%), Query Frame = 0 Query: 115 KPNAVVYLGHIPHGFFEEQMKSFFSQFGGVKHVRLSRSKKTGKSRGYAFLEFDDAEVATVVAETMQGYYLGGRKLVCEVLPPTKVHPKLFVDADKKWRVIPWRQLEKDRRTAPKTEVEARKCLSRLVRGDKRKRRKLAAKGIEYEFPGYEATAAEAYVKRKKDDPAAAATAIKDVEKSEGKTGGRK 301 +P+ VVY+GHIPHGF+EE M FF QFG V VR+SRSKK+G+ +GYA++EF EVA +VAETM GY+L ++LVC VL ++HP LF A K+R + W L +++ A +T+ + K ++L++ DK K+ KLA GI+Y+FPG+ AT + V + A K+ K E GG++ Sbjct: 70 EPSGVVYIGHIPHGFYEEAMNGFFKQFGDVIRVRISRSKKSGRCKGYAYVEFVSPEVAQIVAETMNGYFLFDKQLVCRVLKFEEIHPNLFDGAGVKFRKVNWHGLYREKYNADRTQAKDEKHTAKLLKKDKAKKDKLAKLGIDYDFPGFVATLKDRKVAKGPVQKPKGAKRNKESAKVEDGKGGKE 255
BLAST of NO06G01990 vs. NCBI_GenBank
Match: XP_012195106.1 (hypothetical protein SPRG_01506 [Saprolegnia parasitica CBS 223.65] >KDO34370.1 hypothetical protein SPRG_01506 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 160.6 bits (405), Expect = 1.100e-35 Identity = 77/151 (50.99%), Postives = 107/151 (70.86%), Query Frame = 0 Query: 117 NAVVYLGHIPHGFFEEQMKSFFSQFGGVKHVRLSRSKKTGKSRGYAFLEFDDAEVATVVAETMQGYYLGGRKLVCEVLPPTKVHPKLFVDADKKWRVIPWRQLEKDRRTAPKTEVEARKCLSRLVRGDKRKRRKLAAKGIEYEFPGYEATA 268 +AV+Y+G IPHGF+E+QMK FF QFGG+K +R+SR+KK+G S+ YAF+EF+D EVA VVA TM GY L R L C V+P K+H ++F+ A++K+R +P++ L APKT + +RLV ++ KR KLAA G+EY+F GY A Sbjct: 94 SAVIYIGRIPHGFYEKQMKGFFGQFGGIKRLRVSRNKKSGASKHYAFIEFEDPEVAGVVAHTMDGYRLFDRVLACAVVPTEKLHERMFIGANRKFRPLPYKNLAIRAHNAPKTFEQQEAANARLVAKEEAKRAKLAAMGVEYDFVGYAGVA 244 The following BLAST results are available for this feature:
BLAST of NO06G01990 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G01990 ID=NO06G01990|Name=NO06G01990|organism=Nannochloropsis oceanica|type=gene|length=1751bpback to top protein sequence of NO06G01990.1 >NO06G01990.1-protein ID=NO06G01990.1-protein|Name=NO06G01990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=449bpback to top Synonyms
Publications
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