NO06G01930, NO06G01930 (gene) Nannochloropsis oceanica

Overview
NameNO06G01930
Unique NameNO06G01930
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3288
Alignment locationchr6:578804..582091 -

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Properties
Property NameValue
DescriptionG patch domain-containing protein 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:578804..582091 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003723RNA binding
GO:0003676nucleic acid binding
Vocabulary: Biological Process
TermDefinition
GO:0006397mRNA processing
GO:0006397mRNA processing
Vocabulary: INTERPRO
TermDefinition
IPR000467G_patch_dom
IPR011666DUF1604
Homology
BLAST of NO06G01930 vs. NCBI_GenBank
Match: EWM26205.1 (g patch domain-containing protein 1 [Nannochloropsis gaditana])

HSP 1 Score: 631.3 bits (1627), Expect = 5.200e-177
Identity = 377/692 (54.48%), Postives = 436/692 (63.01%), Query Frame = 0
Query:    1 MSAYRGKTRKDEVRDDEGRRRFHGAFTGGFSAGYFNSVGSQEGWEPATFQSSRENRAQGQGGKSKGEQQRPEDFMDEEDGLLGRKLQAQLTYDTLGDASKQLLRRQVEKEAVGSVIPGMGMVDELLAPTDVAIGKKLLQMMGWKEGVGVGSRQLRPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALLPDHLRHDASLVRGGKILFSRPNVGVTLLPTAKNDLYGLGFDPAKDAPEFNAFRLQQGIGREGGRNGDDDSRGVYRMGDVLGKGTSSRAGRRNMMGFALDEEEDDVYDDLDGRGREGR-------DKSSGKVGGDEYLTVLGEDEEEDEDERMGRRPKLSTGAAKRMALEDWIGGCTSSTTAAAGATAASAPSKCPTDSRPVPEGFVLGVEQMAFKQPFWAPPTPPRGFVPFHHFKREKEGEE--DIDHAVAVKRHREANQGKLAASARGSLLREAIPKAPMGEGGREAASIFDLMSEEDRQRIKAYKSGXXXXXXXXXXXXXXXXXXXXXXXVPTAFQGMQGALAKRFSVAERPTTMNSSLPEGLIERGRIGGTGGIAPSVALPPPP-PDVKSVVTPVRSELYFYPASLLCKRFNVSLPQHARLTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIPLQQGKGKAS--SLLSNKFDQEMEALLP 681
            MSAYRGKT+KDEVRD+EGRRRFHGAFTGGFSAGY+NSVGSQEGW+P+TF+SSR+NRA      S+  +QRPEDFMDEEDGLLGR L  QL YDTLG +SKQLLR++VEKEAVGS IPG+GMVDELL PT+VAIGKKLLQMMGWKEGVGVGSRQ RPR                             A LP+HLR D++LV+ GKI F+RP +G+TLLP  KND +GLGFDP KDAPE  AFR +QG    G   G+DDSRGVYRMGDVLGK TSSRAGRRN  GFALDE+EDDVYD +  R  +G                   YL+ LGE ++       G+   L  GAAKR+ALE WI         A    A     +CPTDSRPV EGFVLGV+ + ++ P W  PTPPRGFVP+H F+ E+ G E    DHA  V+RHR+ANQG+L A  RG LL EA  +A  G      +SIFDLMSE DR RI+ +K+                        VP+AFQGMQGALAKRFSVAE+P T   +LPEGL E G+  G GGIAPSVAL  P  P VK++  P RS++ F P SLLCKRFNVS+P HARLTPA                                               +PL  GKGKA   SLLSNKFD+EMEALLP
Sbjct:    1 MSAYRGKTQKDEVRDEEGRRRFHGAFTGGFSAGYYNSVGSQEGWQPSTFKSSRDNRA-----SSRPSRQRPEDFMDEEDGLLGRDLHTQLPYDTLGVSSKQLLRKEVEKEAVGSSIPGLGMVDELLVPTEVAIGKKLLQMMGWKEGVGVGSRQRRPR-------KKRGKDSGEGEAGVEEAVDDDVAFLPEHLRDDSTLVQQGKITFARPTLGLTLLPRPKNDRHGLGFDPEKDAPELAAFR-RQGPNDWG---GEDDSRGVYRMGDVLGKDTSSRAGRRNASGFALDEDEDDVYDQVTERAGQGERXXXXXXXXXXXXXXXSMYLSTLGEPDDXXXXXXSGQASTLMAGAAKRVALEAWISXXXXXXRGAEIPGAVGL--RCPTDSRPVLEGFVLGVKDLGYQPPAWPLPTPPRGFVPYHSFETEQGGVEGRGEDHAGTVRRHRDANQGRLRAETRGGLLGEAPVQAAAG-----TSSIFDLMSEADRARIETFKTQGAPALAHAAASEAAESPSASFPPVPSAFQGMQGALAKRFSVAEKPATTGPTLPEGLTEGGK--GAGGIAPSVALAGPALPKVKTIPAPARSQVLFQPVSLLCKRFNVSVPGHARLTPAISLGGQPPSARPAYALPRAFGGGRAEALKPPP---------------VPLGPGKGKAGPVSLLSNKFDREMEALLP 652          
BLAST of NO06G01930 vs. NCBI_GenBank
Match: XP_005855507.1 (g patch domain-containing protein 1, partial [Nannochloropsis gaditana CCMP526] >EKU20854.1 g patch domain-containing protein 1, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 381.3 bits (978), Expect = 9.400e-102
Identity = 204/298 (68.46%), Postives = 230/298 (77.18%), Query Frame = 0
Query:    1 MSAYRGKTRKDEVRDDEGRRRFHGAFTGGFSAGYFNSVGSQEGWEPATFQSSRENRAQGQGGKSKGEQQRPEDFMDEEDGLLGRKLQAQLTYDTLGDASKQLLRRQVEKEAVGSVIPGMGMVDELLAPTDVAIGKKLLQMMGWKEGVGVGSRQLRPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALLPDHLRHDASLVRGGKILFSRPNVGVTLLPTAKNDLYGLGFDPAKDAPEFNAFRLQQGIGREGGRNGDDDSRGVYRMGDVLGKGTSSRAGRRNMMGFALDEEEDDVYDDL 299
            MSAYRGKT+KDEVRD+EGRRRFHGAFTGGFSAGY+NSVGSQEGW+P+TF+SSR+NRA      S+  +QRPEDFMDEEDGLLGR L  QL YDTLG +SKQLLR++VEKEAVGS IPG+GMVDELL PT+VAIGKKLLQMMGWKEGVGVGSRQ RPR                             A LP+HLR D++LV+ GKI F+RP +G+TLLP  KND +GLGFDP KDAPE  AFR +QG    G   G+DDSRGVYRMGDVLGK TSSRAGRRN  GFALDE+EDDVYD +
Sbjct:    9 MSAYRGKTQKDEVRDEEGRRRFHGAFTGGFSAGYYNSVGSQEGWQPSTFKSSRDNRA-----SSRPSRQRPEDFMDEEDGLLGRDLHTQLPYDTLGVSSKQLLRKEVEKEAVGSSIPGLGMVDELLVPTEVAIGKKLLQMMGWKEGVGVGSRQRRPR-------KKRGKDSGEGEAGVEEAVDDDVAFLPEHLRDDSTLVQQGKITFARPTLGLTLLPRPKNDRHGLGFDPEKDAPELAAFR-RQGPNDWG---GEDDSRGVYRMGDVLGKDTSSRAGRRNASGFALDEDEDDVYDQV 290          
BLAST of NO06G01930 vs. NCBI_GenBank
Match: XP_009517317.1 (hypothetical protein PHYSODRAFT_468736 [Phytophthora sojae] >EGZ30042.1 hypothetical protein PHYSODRAFT_468736 [Phytophthora sojae])

HSP 1 Score: 166.0 bits (419), Expect = 6.200e-37
Identity = 142/435 (32.64%), Postives = 194/435 (44.60%), Query Frame = 0
Query:    5 RGKTRKDEVRDDEGRRRFHGAFTGGFSAGYFNSVGSQEGWEPATFQSSRENRAQGQGGKSKGEQQRPEDFMDEEDG-LLGRKLQAQLTYDTLGDASKQLLRRQVEKEAVGS---VIPGMGMVDELLAPTDVAIGKKLLQMMGWKEGVGVGSRQLRPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALLPDHLRHDASLVRGGKILFSRPNVGV---------TLLPTAKNDLYGLGFDPAKDAPEFNAFRLQQGIGREGGRNGDDDSRGVYRMGDVLGKGTSSRAGRRNMMGFALDEEEDDVYDDLDGRGREGRDKSSGKVGGDEYLTVLGEDEEEDEDERMGRRPKLSTGAAKRMALEDWIGGCTSSTTAAAGATAASAPSKCPTDSRPVPEGFVLGVEQMAFKQPFWAPPTPPRGFVPFHHFKREKEGEEDI 427
            RG  R  EV D +GRRRFHGAFTGGFSAGY+NSVGS+EGW P TF SSR NR +         QQR EDFMDEED  LLG++L+    YDTL   +K+ L++Q + +   S    IPG  + D+ + P + +IG KLL+ MGWKEG G+G R  R +                              LL  + + + + ++          V V            P  K D YG GFDP  +APEF+ ++ QQ    E  R+ +   R V    D L   T++    R   G+ L   E+D  DD+D           G V   E+  V+                    GA K +   D      SS   +     A++ + C +D RPV  GF L   +    +        P  F  +HHF    +G+E +
Sbjct:    3 RGGVRNQEVTDAQGRRRFHGAFTGGFSAGYYNSVGSEEGWTPRTFSSSRGNRME-------RVQQRAEDFMDEEDDPLLGKRLETTERYDTLQTGAKRRLQQQQQADQAASGAGAIPGFALPDDWVLPVNDSIGAKLLKQMGWKEGHGIGQRVRRRK-----------------FLEEEKEAVENLKLLTQYAQEEKTEMKARDGAEEEEEVCVPPRKVFDVQKAFPKPKLDRYGAGFDPYTNAPEFSRYKQQQ---EEKQRSKEGPHRQVVSFSDAL---TATNGSNRATTGYGLSALEED--DDVD---------VYGTVSMAEFDRVIA-----------------PLGAKKDLKRLD------SSAQESRRHEKANSRALC-SDGRPVLPGFELAASKEKPPKAVNLRLAVPADFKAYHHFNENVDGDEGV 372          
BLAST of NO06G01930 vs. NCBI_GenBank
Match: XP_002894993.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY62116.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 163.7 bits (413), Expect = 3.100e-36
Identity = 114/291 (39.18%), Postives = 151/291 (51.89%), Query Frame = 0
Query:    5 RGKTRKDEVRDDEGRRRFHGAFTGGFSAGYFNSVGSQEGWEPATFQSSRENRAQGQGGKSKGEQQRPEDFMDEEDG-LLGRKLQAQLTYDTLGDASKQLLRRQVEKEAVGSVIPGMGMVDELLAPTDVAIGKKLLQMMGWKEGVGVGSRQLRPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALLPDHLRHDASLVRGGKILFSRPNVGVTLLPTAKNDLYGLGFDPAKDAPEFNAFRLQQGIGREGGRNGDDDSRGVYRMGDVLGKGTSSRAGRRNMMGFALDEEEDDV 295
            RG  R  EV D +GRRRFHGAFTGGFSAGY+NSVGSQEGW P TF SSR+NR       S   +QRPEDFMDEED  LLG++L+    YDTL   +K+ L++Q ++    + IPG  + ++ + P + +IG KLL+ MGWKEG G+G R +R R                                 + L+ +   V   K+   + +      P  K D YG GFDP +DAPEF+  R QQ    E  +  +   R +    D L K T       +  G +  EE DD+
Sbjct:    3 RGSVRNQEVTDAQGRRRFHGAFTGGFSAGYYNSVGSQEGWTPTTFSSSRDNR-------SSRVEQRPEDFMDEEDDPLLGKRLETTEHYDTLQTGAKRRLQQQPDR--TEAAIPGFSLPEDWVLPVNDSIGAKLLKQMGWKEGHGIGQR-VRKRKFQDEKDTEQVKLLMLDSSEEKTE--------TEPLQEEEVYVPPRKMFDVQKS-----FPKPKLDRYGAGFDPYRDAPEFSMHRQQQ---EEKVKEKEGSHRQMVSFLDAL-KTTDGSNRATSGYGLSALEENDDI 266          
BLAST of NO06G01930 vs. NCBI_GenBank
Match: ETO63085.1 (hypothetical protein F444_19224 [Phytophthora parasitica P1976])

HSP 1 Score: 162.2 bits (409), Expect = 9.000e-36
Identity = 171/611 (27.99%), Postives = 250/611 (40.92%), Query Frame = 0
Query:    5 RGKTRKDEVRDDEGRRRFHGAFTGGFSAGYFNSVGSQEGWEPATFQSSRENRAQGQGGKSKGEQQRPEDFMDEEDG-LLGRKLQAQLTYDTLGDASKQLLRRQVEKEAVGSVIPGMGMVDELLAPTDVAIGKKLLQMMGWKEGVGVGSRQLRPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALLPDHLRHDASLV--RGGKILFSRPNVGVTL---LPTAKNDLYGLGFDPAKDAPEFNAFRLQQGIGREGGRNGDDDSRGVYRMGDVLGKGTSSRAGRRNMMGFALDEEEDDVYDDLDGRGREGR---DKSSGKVGGDEYLTVLGEDEEEDED-ERMGRRPKLSTGAAKRMALEDWIGGCTSSTTAAAGATAASAPSKCPTDSRPVPEGFVLGVEQMAFKQPFWAPPTPPRGFVPFHHFKREKEGEEDIDHAVAVKRHREANQGK--LAASARGSLLREAI-----PKAPMGEGGREAASIFDLMSEEDRQRI---KAYKSGXXXXXXXXXXXXXXXXXXXXXXXVPTAFQGMQGALAKRFSVAERPTTMNSSLPEGLIERGRIGGTGGIAPSVALPPPPPDVKSVVTPVRSELYFYPASLLCKRFNV 596
            RG  R  EV D +GRRRFHGAFTGGFSAGY+NSVGS+EGW P TF SSR +R       S   +QRPEDFMDEED  LLG++L+    YDTL   +K+ L++Q ++      IPG  + ++ + P + +IG KLL+ MGWKEG G+G R  R +                              LL    R D +    +  + ++  P     +    P  K D YG GFDP  DAPEF+ ++ QQ   ++ G +     R V    D L    S+    R   G+ L   E++  DD+D  G       D+    +G  + +  L    +E    E++G    L                                     +D RPV  GF L   +    +      T P  F  +H F+ +++  + +            N G   + A  R +LL +         A  GE      S+FDL+ +E + ++    A                           + +   G Q       S+A+R  +  S++ E             I+ SV++  P           RS+  + P SLLCKRF+V
Sbjct:    3 RGSIRNQEVTDAQGRRRFHGAFTGGFSAGYYNSVGSEEGWTPRTFSSSRSSR-------SSRVEQRPEDFMDEEDDPLLGKRLETTERYDTLQTGAKRQLQQQPDRTEAS--IPGFSLPEDWVLPVNDSIGAKLLKQMGWKEGHGIGQRVRRRK-------------------YQDEKDTEQPKLLTQDAREDKTKTEPQDEEEVYVPPRKVFDVQKAFPKPKLDRYGAGFDPYSDAPEFSMYKQQQERKQKEGSH-----RQVVSFLDAL---KSTDGSNRATTGYGLSALEEN--DDIDVYGTVSMAEFDRVIAPLGARKDVKRLDSSAQESRRYEKLGHSRALC------------------------------------SDGRPVLPGFELAASKEKPPKAVNVHLTVPSDFKAYHRFEDDEDQSDTVTALYRKYNFSTDNMGNRMVTARQRAALLEDDKKDTHGDTAGAGEVKSSTRSVFDLLGDEQKAKLFDAAAQAKQGVPLSSAKRATTDVSAAPRVRQPLVSGSTGDQFRATISASIAKRFVSSKSTVDE------------EISDSVSVEEPQTKKSR-----RSQSLWIPKSLLCKRFHV 522          
BLAST of NO06G01930 vs. NCBI_GenBank
Match: ETO63086.1 (hypothetical protein, variant [Phytophthora parasitica P1976])

HSP 1 Score: 162.2 bits (409), Expect = 9.000e-36
Identity = 171/611 (27.99%), Postives = 250/611 (40.92%), Query Frame = 0
Query:    5 RGKTRKDEVRDDEGRRRFHGAFTGGFSAGYFNSVGSQEGWEPATFQSSRENRAQGQGGKSKGEQQRPEDFMDEEDG-LLGRKLQAQLTYDTLGDASKQLLRRQVEKEAVGSVIPGMGMVDELLAPTDVAIGKKLLQMMGWKEGVGVGSRQLRPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALLPDHLRHDASLV--RGGKILFSRPNVGVTL---LPTAKNDLYGLGFDPAKDAPEFNAFRLQQGIGREGGRNGDDDSRGVYRMGDVLGKGTSSRAGRRNMMGFALDEEEDDVYDDLDGRGREGR---DKSSGKVGGDEYLTVLGEDEEEDED-ERMGRRPKLSTGAAKRMALEDWIGGCTSSTTAAAGATAASAPSKCPTDSRPVPEGFVLGVEQMAFKQPFWAPPTPPRGFVPFHHFKREKEGEEDIDHAVAVKRHREANQGK--LAASARGSLLREAI-----PKAPMGEGGREAASIFDLMSEEDRQRI---KAYKSGXXXXXXXXXXXXXXXXXXXXXXXVPTAFQGMQGALAKRFSVAERPTTMNSSLPEGLIERGRIGGTGGIAPSVALPPPPPDVKSVVTPVRSELYFYPASLLCKRFNV 596
            RG  R  EV D +GRRRFHGAFTGGFSAGY+NSVGS+EGW P TF SSR +R       S   +QRPEDFMDEED  LLG++L+    YDTL   +K+ L++Q ++      IPG  + ++ + P + +IG KLL+ MGWKEG G+G R  R +                              LL    R D +    +  + ++  P     +    P  K D YG GFDP  DAPEF+ ++ QQ   ++ G +     R V    D L    S+    R   G+ L   E++  DD+D  G       D+    +G  + +  L    +E    E++G    L                                     +D RPV  GF L   +    +      T P  F  +H F+ +++  + +            N G   + A  R +LL +         A  GE      S+FDL+ +E + ++    A                           + +   G Q       S+A+R  +  S++ E             I+ SV++  P           RS+  + P SLLCKRF+V
Sbjct:    3 RGSIRNQEVTDAQGRRRFHGAFTGGFSAGYYNSVGSEEGWTPRTFSSSRSSR-------SSRVEQRPEDFMDEEDDPLLGKRLETTERYDTLQTGAKRQLQQQPDRTEAS--IPGFSLPEDWVLPVNDSIGAKLLKQMGWKEGHGIGQRVRRRK-------------------YQDEKDTEQPKLLTQDAREDKTKTEPQDEEEVYVPPRKVFDVQKAFPKPKLDRYGAGFDPYSDAPEFSMYKQQQERKQKEGSH-----RQVVSFLDAL---KSTDGSNRATTGYGLSALEEN--DDIDVYGTVSMAEFDRVIAPLGARKDVKRLDSSAQESRRYEKLGHSRALC------------------------------------SDGRPVLPGFELAASKEKPPKAVNVHLTVPSDFKAYHRFEDDEDQSDTVTALYRKYNFSTDNMGNRMVTARQRAALLEDDKKDTHGDTAGAGEVKSSTRSVFDLLGDEQKAKLFDAAAQAKQGVPLSSAKRATTDVSAAPRVRQPLVSGSTGDQFRATISASIAKRFVSSKSTVDE------------EISDSVSVEEPQTKKSR-----RSQSLWIPKSLLCKRFHV 522          
BLAST of NO06G01930 vs. NCBI_GenBank
Match: XP_024577443.1 (hypothetical protein F443_19278 [Plasmopara halstedii] >CEG41074.1 hypothetical protein F443_19278 [Plasmopara halstedii])

HSP 1 Score: 162.2 bits (409), Expect = 9.000e-36
Identity = 151/486 (31.07%), Postives = 214/486 (44.03%), Query Frame = 0
Query:    7 KTRKDEVRDDEGRRRFHGAFTGGFSAGYFNSVGSQEGWEPATFQSSRENRAQGQGGKSKGEQQRPEDFMDEEDG-LLGRKLQAQLTYDTLGDASKQLLRRQVEKEAVGSVIPGMGMVDELLAPTDVAIGKKLLQMMGWKEGVGVGSRQLRPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALLPDHLRHDASLVRGGKILFSRPNVGVTLLPTAKNDLYGLGFDPAKDAPEFNAFRLQQGIGREGGRNGDDDSRGVYRMGDVLGKGTSSRAGRRNMMGFALDEEEDDVYDDLDGRGREGRDKSSGKVGGDEYLTVLGEDEEEDEDERMGRRPKLSTGAAKRMALEDWIGGCTSSTTAAAGATAASAPSKCPTDSRPVPEGFVLGVEQMAFKQPFWAPPTPPRGFVPFHHFKREKEGEEDIDHAVAVKRHREANQGK----LAASARGSLLREAIPKAPMGEGGREA----ASIFDLMSEEDRQRI 484
            + R  E  D +GRRRFHGAFTGGFSAG++NSVGS+EGW P TF SSR NR       S   +QRPEDFMDEED  LLG++L+    YDTL   +K+ L+ Q   ++V S IPG    ++   P + +IG KLL+ MGWKEG G+G + +R R                               +P     D                  T  P  K D YG GFDP +DAPEF+AF+ QQ   +   +  +   R +    D L K T+      N  G +  EE DD+                     D Y T+  +D +          P  +    KR+             +++   T   + + C +D RPV  GF L + + +  +        P  F  +H F  E + + D   ++  K H   +  K    + A  RG+LL +A  +    + G  A     S+FDL+ EE + +I
Sbjct:  283 RVRDQEATDAQGRRRFHGAFTGGFSAGHYNSVGSKEGWTPKTFSSSRSNR-------SSYVEQRPEDFMDEEDDPLLGKRLETTECYDTLQTGAKRRLQEQQSDQSVVSAIPGFLWPNDWNLPVNDSIGMKLLKRMGWKEGHGIG-QPVRRRKFDKVENKQPKEVLRGDEEQNSEPDDEEVVYVPPRKVFDVR----------------TSFPKPKLDRYGAGFDPYRDAPEFHAFKEQQ---KNKQKEREGSHRHIVSFVDAL-KSTNGTNRATNGYGLSALEENDDI---------------------DVYGTISMDDFDR------AIAPLRAKNDVKRL------------ESSSQHETLRLSRALC-SDGRPVLPGFELAIAKESPSKAVNFHLNVPTNFKAYHRFDNESD-QYDAVTSLYRKYHLLNDIVKSGVLVTAKQRGALLEDA-GQDVQDQAGNAATVTTGSVFDLLGEEQKAKI 698          
BLAST of NO06G01930 vs. NCBI_GenBank
Match: ETI34141.1 (hypothetical protein F443_19278 [Phytophthora parasitica P1569])

HSP 1 Score: 161.4 bits (407), Expect = 1.500e-35
Identity = 170/611 (27.82%), Postives = 248/611 (40.59%), Query Frame = 0
Query:    5 RGKTRKDEVRDDEGRRRFHGAFTGGFSAGYFNSVGSQEGWEPATFQSSRENRAQGQGGKSKGEQQRPEDFMDEEDG-LLGRKLQAQLTYDTLGDASKQLLRRQVEKEAVGSVIPGMGMVDELLAPTDVAIGKKLLQMMGWKEGVGVGSRQLRPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALLPDHLRHDASLV--RGGKILFSRPNVGVTL---LPTAKNDLYGLGFDPAKDAPEFNAFRLQQGIGREGGRNGDDDSRGVYRMGDVLGKGTSSRAGRRNMMGFALDEEEDDVYDDLDGRGREGR---DKSSGKVGGDEYLTVLGEDEEEDED-ERMGRRPKLSTGAAKRMALEDWIGGCTSSTTAAAGATAASAPSKCPTDSRPVPEGFVLGVEQMAFKQPFWAPPTPPRGFVPFHHFKREKEGEEDIDHAVAVKRHREANQGK--LAASARGSLLREAI-----PKAPMGEGGREAASIFDLMSEEDRQRI---KAYKSGXXXXXXXXXXXXXXXXXXXXXXXVPTAFQGMQGALAKRFSVAERPTTMNSSLPEGLIERGRIGGTGGIAPSVALPPPPPDVKSVVTPVRSELYFYPASLLCKRFNV 596
            RG  R  EV D +GRRRFHGAFTGGFSAGY+NSVGS+EGW P TF SSR +R       S   +QRPEDFMDEED  LLG++L+    YDTL   +K+ L++Q ++      IPG  + ++ + P + +IG KLL+ MGWKEG G+G R  R +                              LL    R D +    +  + ++  P     +    P  K D YG GFDP  DAPEF+ ++ QQ       +  +   R V    D L    S+    R   G+ L   E++  DD+D  G       D+    +G  + +  L    +E    E++G    L                                     +D RPV  GF L   +    +      T P  F  +H F+ +++  + +            N G   + A  R +LL +         A  GE      S+FDL+ +E + ++    A                           + +   G Q       S+A+R  +  S++ E             I+ SV++  P           RS+  + P SLLCKRF+V
Sbjct:    3 RGSIRNQEVTDAQGRRRFHGAFTGGFSAGYYNSVGSEEGWTPRTFSSSRSSR-------SSRVEQRPEDFMDEEDDPLLGKRLETTERYDTLQTGAKRQLQQQPDRTEAS--IPGFSLPEDWVLPVNDSIGAKLLKQMGWKEGHGIGQRVRRRK-------------------YQDEKDTEQPKLLTQDAREDKTKTEPQDEEEVYVPPRKVFDVQKAFPKPKLDRYGAGFDPYSDAPEFSMYKQQQ---ERKQKEKEGSHRQVVSFLDAL---KSTDGSNRATTGYGLSALEEN--DDIDVYGTVSMAEFDRVIAPLGARKDVKRLDSSAQESRRYEKLGHSRALC------------------------------------SDGRPVLPGFELAASKEKPPKAVNVHLTVPSDFKAYHRFEDDEDQSDTVTALYRKYNFSTDNMGNRMVTARQRAALLEDDKKDTHGDTAGAGEVKSSTRSVFDLLGDEQKAKLFDAAAQAKQGVPLSSAKRATTDVSAAPRVRQPLVSGSTGDQFRATISASIAKRFVSSKSTVDE------------EISDSVSVEEPQTKKSR-----RSQSLWIPKSLLCKRFHV 524          
BLAST of NO06G01930 vs. NCBI_GenBank
Match: ETI34142.1 (hypothetical protein, variant [Phytophthora parasitica P1569])

HSP 1 Score: 161.4 bits (407), Expect = 1.500e-35
Identity = 170/611 (27.82%), Postives = 248/611 (40.59%), Query Frame = 0
Query:    5 RGKTRKDEVRDDEGRRRFHGAFTGGFSAGYFNSVGSQEGWEPATFQSSRENRAQGQGGKSKGEQQRPEDFMDEEDG-LLGRKLQAQLTYDTLGDASKQLLRRQVEKEAVGSVIPGMGMVDELLAPTDVAIGKKLLQMMGWKEGVGVGSRQLRPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALLPDHLRHDASLV--RGGKILFSRPNVGVTL---LPTAKNDLYGLGFDPAKDAPEFNAFRLQQGIGREGGRNGDDDSRGVYRMGDVLGKGTSSRAGRRNMMGFALDEEEDDVYDDLDGRGREGR---DKSSGKVGGDEYLTVLGEDEEEDED-ERMGRRPKLSTGAAKRMALEDWIGGCTSSTTAAAGATAASAPSKCPTDSRPVPEGFVLGVEQMAFKQPFWAPPTPPRGFVPFHHFKREKEGEEDIDHAVAVKRHREANQGK--LAASARGSLLREAI-----PKAPMGEGGREAASIFDLMSEEDRQRI---KAYKSGXXXXXXXXXXXXXXXXXXXXXXXVPTAFQGMQGALAKRFSVAERPTTMNSSLPEGLIERGRIGGTGGIAPSVALPPPPPDVKSVVTPVRSELYFYPASLLCKRFNV 596
            RG  R  EV D +GRRRFHGAFTGGFSAGY+NSVGS+EGW P TF SSR +R       S   +QRPEDFMDEED  LLG++L+    YDTL   +K+ L++Q ++      IPG  + ++ + P + +IG KLL+ MGWKEG G+G R  R +                              LL    R D +    +  + ++  P     +    P  K D YG GFDP  DAPEF+ ++ QQ       +  +   R V    D L    S+    R   G+ L   E++  DD+D  G       D+    +G  + +  L    +E    E++G    L                                     +D RPV  GF L   +    +      T P  F  +H F+ +++  + +            N G   + A  R +LL +         A  GE      S+FDL+ +E + ++    A                           + +   G Q       S+A+R  +  S++ E             I+ SV++  P           RS+  + P SLLCKRF+V
Sbjct:    3 RGSIRNQEVTDAQGRRRFHGAFTGGFSAGYYNSVGSEEGWTPRTFSSSRSSR-------SSRVEQRPEDFMDEEDDPLLGKRLETTERYDTLQTGAKRQLQQQPDRTEAS--IPGFSLPEDWVLPVNDSIGAKLLKQMGWKEGHGIGQRVRRRK-------------------YQDEKDTEQPKLLTQDAREDKTKTEPQDEEEVYVPPRKVFDVQKAFPKPKLDRYGAGFDPYSDAPEFSMYKQQQ---ERKQKEKEGSHRQVVSFLDAL---KSTDGSNRATTGYGLSALEEN--DDIDVYGTVSMAEFDRVIAPLGARKDVKRLDSSAQESRRYEKLGHSRALC------------------------------------SDGRPVLPGFELAASKEKPPKAVNVHLTVPSDFKAYHRFEDDEDQSDTVTALYRKYNFSTDNMGNRMVTARQRAALLEDDKKDTHGDTAGAGEVKSSTRSVFDLLGDEQKAKLFDAAAQAKQGVPLSSAKRATTDVSAAPRVRQPLVSGSTGDQFRATISASIAKRFVSSKSTVDE------------EISDSVSVEEPQTKKSR-----RSQSLWIPKSLLCKRFHV 524          
BLAST of NO06G01930 vs. NCBI_GenBank
Match: POM72918.1 (Hypothetical protein PHPALM_10298, partial [Phytophthora palmivora var. palmivora])

HSP 1 Score: 160.6 bits (405), Expect = 2.600e-35
Identity = 160/494 (32.39%), Postives = 214/494 (43.32%), Query Frame = 0
Query:    9 RKDEVRDDEGRRRFHGAFTGGFSAGYFNSVGSQEGWEPATFQSSRENRAQGQGGKSKGEQQRPEDFMDEEDG-LLGRKLQAQLTYDTLGDASKQLLRRQVEKEAVGSVIPGMGMVDELLAPTDVAIGKKLLQMMGWKEGVGVGSRQLRPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALLPDHLRHDASLVRGGKILFSRPNVGVTLLPTAKNDLYGLGFDPAKDAPEFNAFRLQQGIGREGGRNGDDDSRGVYRMGDVLGKGTSSRAGRRNMMGFALDEEEDDVYDDLDGRGREGRDKSSGKVGGDEYLTVLGEDEEEDEDERMGRRPKLSTGAAKRMALEDWIGGCTSSTTAAAGATAASAPSKCPTDSRPVPEGFVLGVEQMAFKQPFWAPPTPPRGFVPFHHF-KREKEGEEDIDHAVAV-------KRHREANQGKLAASARGSLLREAIPKAP-MGEGGREAA---------SIFDLMSEEDRQRI 484
            R  EV D +GRRRFHGAFTGGFSAGY+NSVGS+EGW P TF SSR NR       S   +QRPEDFMDEED  LLG++L+    YDTL  A+++  R Q    A  + IPG  + ++ + P + +IG KLLQ MGWKEG G+G R  R +                              + PD +      V   +  F +P          K D YG GFDP  DAPEF+ ++ QQ    +  +  +   R V    D L    S+    R   G+ L   E++  DD+D           G V   E+  V+                    GA K +   D      SS   +     A+      +D RPV  GF L   +    +        P  F P+HHF + E++G+     AV V             N   + A  RG LL +    A   G+   EAA         S+FDL+ EE R ++
Sbjct:    6 RSQEVTDAQGRRRFHGAFTGGFSAGYYNSVGSEEGWTPRTFSSSRGNR-------SSRVEQRPEDFMDEEDDPLLGKRLETTERYDTLQTAARR--RLQQPDRAQATAIPGFKLPEDWVLPVNESIGAKLLQQMGWKEGHGIGQRVRRRK------------------FKEEKGEDVVQGVEPDEVYVPQRNVFDVRKTFPKP----------KLDRYGAGFDPYVDAPEFSMYKQQQ---EKKQKEKEGSHRQVVSFLDAL---KSTNGSNRATSGYGLSALEEN--DDID---------VYGAVSMTEFDRVIA-----------------PLGARKDVQRLD------SSAQESRRYEKANRSRALCSDGRPVLPGFELAASKEKPSKVVNLRLVVPPEFKPYHHFDEDERQGD-----AVTVLYGKFNFSADNTTNGVVVTAKQRGDLLGDNHHDAQGNGDNVAEAAGENKSSGHSSVFDLLGEEQRAKL 417          
The following BLAST results are available for this feature:
BLAST of NO06G01930 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26205.15.200e-17754.48g patch domain-containing protein 1 [Nannochlorops... [more]
XP_005855507.19.400e-10268.46g patch domain-containing protein 1, partial [Nann... [more]
XP_009517317.16.200e-3732.64hypothetical protein PHYSODRAFT_468736 [Phytophtho... [more]
XP_002894993.13.100e-3639.18conserved hypothetical protein [Phytophthora infes... [more]
ETO63085.19.000e-3627.99hypothetical protein F444_19224 [Phytophthora para... [more]
ETO63086.19.000e-3627.99hypothetical protein, variant [Phytophthora parasi... [more]
XP_024577443.19.000e-3631.07hypothetical protein F443_19278 [Plasmopara halste... [more]
ETI34141.11.500e-3527.82hypothetical protein F443_19278 [Phytophthora para... [more]
ETI34142.11.500e-3527.82hypothetical protein, variant [Phytophthora parasi... [more]
POM72918.12.600e-3532.39Hypothetical protein PHPALM_10298, partial [Phytop... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000265NSK000265Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G01930.1NO06G01930.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|631955gene_6503Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100025g20gene4311Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G01930.1NO06G01930.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G01930 ID=NO06G01930|Name=NO06G01930|organism=Nannochloropsis oceanica|type=gene|length=3288bp
ACAGGCACTGCTCCGGGCCGCATCATAACTCCGGCCAATATAAATGAGCC
TCCCCAGATCTCTATCATCCTCCACCTCCTGAACCACCTCAAGAAACAAT
GAGTGCCTATCGTGGCAAAACGCGGAAGGACGAAGTTCGGGACGATGAGG
GCCGGCGACGGTTCCATGGCGCGTTCACCGGTGGGTTTTCGGCTGGGTAT
TTCAATAGCGTTGGCAGCCAGGAGGGATGGGAGCCCGCCACATTCCAATC
CTCCCGGGAAAATCGTGCGCAAGGGCAAGGAGGGAAATCAAAGGGAGAAC
AGCAGCGTCCTGAAGATTTTATGGATGAGGAGGACGGATTGCTCGGTCGG
AAGTTGCAAGCGCAGCTGACTTACGATACGTTAGGGGACGCGTCGAAGCA
ATTGTTGAGAAGGCAGGTGGAGAAGGAGGCGGTGGGAAGTGTTATTCCGG
GGATGGGGATGGTAGATGAGTTGTTGGCGCCCACGGATGTGGCAATTGGA
AAGAAGTTGTTGCAGATGATGGGGTGGAAGGAGGGGGTGGGGGTGGGGTC
GAGGCAACTTCGTCCTCGGAAGAAGCGGAAGAAGCTGAAGAAGGGGGGGC
ATGCCGATGGGAACGAGGTAGACGAGGAGGAAGAGGAAGATGATTTTGAT
AGTGCTGCTTTGCTCCCTGATCATTTGCGGCACGATGCTTCGTTGGTCCG
AGGGGGAAAGATACTTTTTAGCCGACCTAACGTGGGTGTGACGTTACTAC
CAACGGCCAAAAACGACTTGTACGGGCTGGGGTTCGATCCTGCGAAAGAC
GCGCCTGAATTCAATGCATTTCGCTTGCAACAGGGAATAGGAAGGGAAGG
AGGACGGAATGGTGATGATGACAGTAGAGGAGTATATCGGATGGGGGATG
TATTGGGGAAGGGGACGTCGAGTCGGGCAGGACGGCGGAACATGATGGGC
TTTGCGCTGGACGAGGAGGAGGATGATGTATATGATGACCTGGATGGAAG
AGGGAGGGAAGGAAGGGATAAAAGTAGTGGAAAGGTAGGAGGAGATGAGT
ATTTGACAGTGCTGGGAGAGGACGAGGAGGAGGACGAGGACGAGCGCATG
GGGCGACGTCCCAAGCTAAGCACAGGGGCGGCAAAACGCATGGCGTTGGA
AGATTGGATTGGAGGATGCACATCCTCTACTACTGCTGCTGCTGGTGCTA
CTGCTGCATCCGCGCCATCGAAATGTCCCACGGATTCTAGGCCGGTGCCT
GAAGGGTTTGTGCTGGGCGTTGAACAGATGGCGTTCAAGCAACCGTTTTG
GGCTCCACCTACCCCTCCGCGGGGTTTTGTCCCGTTTCACCACTTTAAGA
GGGAGAAAGAGGGCGAAGAGGACATCGATCATGCAGTAGCCGTCAAGAGG
CATCGAGAGGCGAATCAAGGGAAGCTGGCAGCCTCGGCAAGGGGGAGCTT
ACTGAGGGAAGCCATTCCGAAGGCCCCAATGGGGGAGGGAGGGAGGGAGG
CGGCCTCTATATTTGACCTCATGTCTGAAGAGGATCGACAGCGAATCAAA
GCCTACAAATCAGGTGATGGAGCAGCAGCTGCGTCATCATCAGCAGCAGC
AGGAGCAGCACCAGCCGCACCAGCACCTGCAGTAGTACCGACGGCGTTCC
AAGGTATGCAAGGAGCGCTGGCAAAGCGATTTAGTGTCGCCGAACGCCCT
ACTACTATGAACAGCTCTTTGCCCGAAGGCCTCATCGAGAGAGGCAGGAT
CGGCGGGACTGGAGGCATTGCTCCGTCTGTGGCCCTTCCTCCTCCACCGC
CTGATGTGAAATCGGTGGTGACACCAGTACGGAGCGAGCTTTACTTTTAT
CCTGCTTCTTTGTTGTGTAAACGATTTAATGTCTCATTGCCTCAGCATGC
GAGACTGACGCCTGCAAGTAGCAATATCATCAGCTCCAGCAGTAGCAATA
ATGTGGTGCTACCGCAGGCGTTGCCTCGTTCGTTTGGAGGAGGAGGAGGA
GAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGAGGAGTGGTACCGAC
GTCACTAATTCCTCTGCAGCAGGGGAAGGGGAAAGCATCTTCTTTATTAA
GCAACAAATTTGACCAGGAAATGGAGGCACTGTTGCCAACAACTGGGAAT
CTTCAGCTAGAGGAGCAACAGTTTGAGGGAGGAGATGAGGAGGGGGAGGG
AGGAGAGGAGGAAGAGAAAGAGGCAGCGTTGCCGGCTTTTGAGAAAAAGG
CACGGCCAACCAAAGATTTTTTCAAGGCTATTTTTGAAGCCTCTTCTTCA
TCGGAAGATGAAGACGAGAGCAACGACGAGAATGAAGATGGAGGGGAGGA
TGAAAAGGCGGCCATTTCTCCTGCTGATGCTGCGGCGGCGGCTCCGAAGC
TGGCAGGGGATGCTCCTACTCCTCCTCGGGTGAGTGCTATTTCTCATGAT
CATTATGTGCAGCCGATTCGGACAGTGGGGGGAGAGACGATGGAGGAGCT
GTTGGCTAAGGGCCCCATGATGATAAGCAAGAAGGAAAAGCGGAAGGCCG
TGGAGGACTTAGTGATGGGGAATGGAGAGGAGGAGGAAGAGGAGGAAGAA
GGGCTGGTGTTTGGAACTGCTGTGCTGAAGAAGAAAAAGGCCCAAAAGTC
CAAGAGTAGCAGCAGCGGTAGCAGACGCGTGCCTGACCTCGCAAAGTCGA
AAGAGGGGGCCGGAACGCCACCATTGTCCACACTAAGGATGGGGAGAGGC
ATACCACCCACTCCGGCACAGTTCGAAGAGATGGCTGCGACACTTGTGAC
CAGATCGCTGGAGGGCAGTCCTCTTCTTCCAACGGATACTGCTACGGCTG
CTTATGCTGTGTCGAAGGGGAAGGGGAAAGTAGAAGATGAGGCAAGCAAC
GATAGTAGCGGTTGCAGTAGTGATGGAGATAGTGAGAGCGGCAGCAGCAG
CAGCGAAGAAGGGCCTAAGCCTTTGAATGCGAAACATGAAGGTGGGAAAG
AAGGGAGTGGAAGTATCAGCATCAGCAGCAGTAGCAGTCGCAGTGTGAAG
AGGAGGCAAGAGCGCGAGGACAAGAAACACCGCAAGGAGTCTAAGGAGAA
GCGGAAGGACAAAAAGAGGGAGAAGGAGAGGAGGAGGCACTCGAAAAAAC
GAAAACACAGCAGAAGCAGCAGGAGCATCAGAAGTACCAGTAAAAAAGGG
AAGAAAAATCACCACCGACGTCAGTTGAGTGAATAAATATAACAGTTATA
AATAGTGAAAAGAAAACGAAGGCAGAGACGATTGCGTA
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protein sequence of NO06G01930.1

>NO06G01930.1-protein ID=NO06G01930.1-protein|Name=NO06G01930.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1046bp
MSAYRGKTRKDEVRDDEGRRRFHGAFTGGFSAGYFNSVGSQEGWEPATFQ
SSRENRAQGQGGKSKGEQQRPEDFMDEEDGLLGRKLQAQLTYDTLGDASK
QLLRRQVEKEAVGSVIPGMGMVDELLAPTDVAIGKKLLQMMGWKEGVGVG
SRQLRPRKKRKKLKKGGHADGNEVDEEEEEDDFDSAALLPDHLRHDASLV
RGGKILFSRPNVGVTLLPTAKNDLYGLGFDPAKDAPEFNAFRLQQGIGRE
GGRNGDDDSRGVYRMGDVLGKGTSSRAGRRNMMGFALDEEEDDVYDDLDG
RGREGRDKSSGKVGGDEYLTVLGEDEEEDEDERMGRRPKLSTGAAKRMAL
EDWIGGCTSSTTAAAGATAASAPSKCPTDSRPVPEGFVLGVEQMAFKQPF
WAPPTPPRGFVPFHHFKREKEGEEDIDHAVAVKRHREANQGKLAASARGS
LLREAIPKAPMGEGGREAASIFDLMSEEDRQRIKAYKSGDGAAAASSSAA
AGAAPAAPAPAVVPTAFQGMQGALAKRFSVAERPTTMNSSLPEGLIERGR
IGGTGGIAPSVALPPPPPDVKSVVTPVRSELYFYPASLLCKRFNVSLPQH
ARLTPASSNIISSSSSNNVVLPQALPRSFGGGGGEGGGGGGGGGGGGVVP
TSLIPLQQGKGKASSLLSNKFDQEMEALLPTTGNLQLEEQQFEGGDEEGE
GGEEEEKEAALPAFEKKARPTKDFFKAIFEASSSSEDEDESNDENEDGGE
DEKAAISPADAAAAAPKLAGDAPTPPRVSAISHDHYVQPIRTVGGETMEE
LLAKGPMMISKKEKRKAVEDLVMGNGEEEEEEEEGLVFGTAVLKKKKAQK
SKSSSSGSRRVPDLAKSKEGAGTPPLSTLRMGRGIPPTPAQFEEMAATLV
TRSLEGSPLLPTDTATAAYAVSKGKGKVEDEASNDSSGCSSDGDSESGSS
SSEEGPKPLNAKHEGGKEGSGSISISSSSSRSVKRRQEREDKKHRKESKE
KRKDKKREKERRRHSKKRKHSRSSRSIRSTSKKGKKNHHRRQLSE*
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Synonyms
Publications