NO06G01790, NO06G01790 (gene) Nannochloropsis oceanica

Overview
NameNO06G01790
Unique NameNO06G01790
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2592
Alignment locationchr6:545774..548365 -

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Properties
Property NameValue
DescriptionTrafficking protein particle complex subunit 13
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:545774..548365 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010378DUF974
Homology
BLAST of NO06G01790 vs. NCBI_GenBank
Match: EWM26215.1 (Protein of unknown function DUF974 [Nannochloropsis gaditana])

HSP 1 Score: 568.9 bits (1465), Expect = 1.800e-158
Identity = 326/550 (59.27%), Postives = 369/550 (67.09%), Query Frame = 0
Query:   39 NPEIFVRRLFKPRLYDQVSIGAGVARQLASINRRMSAGTSSRNSG-GNGFAPPTVLAAEVVQSDFLMQSCLALPEEFGKIYLGETFCAYVSVVNTLPCSIYILEAHASLKSSRSTEVPLQNMAATRQADLEGLDPPPLPLPGQWGGLGVSRERPRELRPGENLDVVVEHVLQELDWHYLAIKLEF---TSTAKHAGGXXXXXXXXXPRPMMKRFKFKVYNPVSLTTTQKALPTGEVLLQAQVKNITERHTSLLLEDVVFLAEEGLRAEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDLLDCVAAFDRHVYLLPEDVVQYIYRLR---------PDIQQQQQSQALP-LVLAAGIPLGQLRVSWRTTLGEAGTLLSPRVHCSPDVATAFRPVELRLVRPLTA-----SMGLEKXXXXXXXXXXXXXXXLVQGQVYTADCELHNNTEKDLWLQVQFHLDTMQGVYVTGKSFQNAGLVPAHGTQRLTFQLLPLMAGLHDVKGLIILDLVTAQEFQQERLCEVMVVRRSGSSVGYGKQRGQ 570
            NPEIFVRRL+KPRL DQV+  AG   QLAS++RRMSAG     +G G   +  TVLAAE+VQSD+L+Q  L LPEEFGKIYLGETFCAYVS+VNTLP SI + EAHASLK+SR  EV LQN  ATRQADL G D PP P+P QWGGLGV R+RP ELRPGENLDVVVEHVLQELDWHYLAI LE    ++T    GG         PR MMKRFKFKV NPV+LTTTQ+ LP+G+VL+QAQ+KNITERHT+L LEDV FLA + L +E                                         D LDCVAAFDRHVYL PEDV Q++YRL          PD    Q S  +    L+ G PLGQLRVSWRTTLGE+GTLLSP V CS  VA+   PVELRL RPL A                          LVQGQVY A C L+NNT+KD+WLQVQFHLD MQGVY+TGKSFQNAG V +HGTQ L F  LPLMAGLHDVKG+ ILD+VTAQE+ Q+RLC+VMV+RRS  SVG G   G+
Sbjct:   37 NPEIFVRRLYKPRLCDQVNTTAGT--QLASLSRRMSAGNRGSGAGEGVKSSTCTVLAAELVQSDYLLQPSLTLPEEFGKIYLGETFCAYVSIVNTLPFSILLFEAHASLKASRGNEVQLQNTVATRQADLVG-DAPP-PVPDQWGGLGVRRDRPLELRPGENLDVVVEHVLQELDWHYLAINLELAPTSNTGTRTGG-------EAPRVMMKRFKFKVSNPVALTTTQRVLPSGQVLVQAQIKNITERHTNLFLEDVTFLAADRLHSE-------AVGLAPNGRSALGAMEQWGDRSPEATLPSEERESDPLDCVAAFDRHVYLQPEDVAQFLYRLSYRAEDTRGPPDQDGMQASSPVARTTLSTGTPLGQLRVSWRTTLGESGTLLSPLVECSSAVASTAPPVELRLSRPLRALRREGDSETSSVDVKPAKDDQEGAAVLVQGQVYAAHCTLYNNTDKDIWLQVQFHLDAMQGVYITGKSFQNAGQVRSHGTQNLLFHFLPLMAGLHDVKGITILDMVTAQEYHQDRLCQVMVLRRS-ESVGQGLGSGK 567          
BLAST of NO06G01790 vs. NCBI_GenBank
Match: XP_005854188.1 (hypothetical protein NGA_2027520, partial [Nannochloropsis gaditana CCMP526] >XP_005855142.1 hypothetical protein NGA_2027510, partial [Nannochloropsis gaditana CCMP526] >EKU21215.1 hypothetical protein NGA_2027510, partial [Nannochloropsis gaditana CCMP526] >EKU22171.1 hypothetical protein NGA_2027520, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 335.5 bits (859), Expect = 3.300e-88
Identity = 195/334 (58.38%), Postives = 217/334 (64.97%), Query Frame = 0
Query:  118 YLGETFCAYVSVVNTLPCSIYILEAHASLKSSRSTEVPLQNMAATRQADLEGLDPPPLPLPGQWGGLGVSRERPRELRPGENLDVVVEHVLQELDWHYLAIKLEF---TSTAKHAGGXXXXXXXXXPRPMMKRFKFKVYNPVSLTTTQKALPTGEVLLQAQVKNITERHTSLLLEDVVFLAEEGLRAEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDLLDCVAAFDRHVYLLPEDVVQYIYRLR---------PDIQQQQQSQALP-LVLAAGIPLGQLRVSWRTTLGEAGTLLSPRVHCSPDVATAFRPVELRLVRPLTA 439
            YLGETFCAYVS+VNTLP SI + EAHASLK+SR  EV LQN  ATRQADL G D PP P+P QWGGLGV R+RP ELRPGENLDVVVEHVLQELDWHYLAI LE    ++T    GG         PR MMKRFKFKV NPV+LTTTQ+ LP+G+VL+QAQ+KNITERHT+L LEDV FLA + L +E                                         D LDCVAAFDRHVYL PEDV Q++YRL          PD    Q S  +    L+ G PLGQLRVSWRTTLGE+GTLLSP V CS  VA+   PVELRL RPL A
Sbjct:    1 YLGETFCAYVSIVNTLPFSILLFEAHASLKASRGNEVQLQNTVATRQADLVG-DAPP-PVPDQWGGLGVRRDRPLELRPGENLDVVVEHVLQELDWHYLAINLELAPTSNTGTRTGG-------EAPRVMMKRFKFKVSNPVALTTTQRVLPSGQVLVQAQIKNITERHTNLFLEDVTFLAADRLHSE-------AVGLAPNGRSALGAMEQWGDRSPEATLPSEERESDPLDCVAAFDRHVYLQPEDVAQFLYRLSYRAEDTRGPPDQDGMQASSPVARTTLSTGTPLGQLRVSWRTTLGESGTLLSPLVECSSAVASTAPPVELRLSRPLRA 318          
BLAST of NO06G01790 vs. NCBI_GenBank
Match: CBN74908.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 143.7 bits (361), Expect = 1.800e-30
Identity = 154/588 (26.19%), Postives = 226/588 (38.44%), Query Frame = 0
Query:   36 STANPEIFVRRLFKPRLYDQVSIGAGVARQLASINRRMSAGTSSRNSGGNGFAPPTVLAAEVVQSDFLMQSCLALPEEFGKIYLGETFCAYVSVVNTLPCSIYILEAHASLKSSRSTEVPLQNMAATRQADLEGLDPPPLPLPGQWGGLGVSRERPRELRPGENLDVVVEHVLQELDWHYLAIKLEFTSTAKHAGGXXXXXXXXXPRPMMKRFKFKVYNPVSLTTTQKALPTGEVLLQAQVKNITERHTSLLLEDVVFLAEEGLRAEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXED--------------------------------------------------LLDCVAAFDRHVYLLPEDVVQYIYRLRPDIQQQQQSQALPLVLAA-------------------GIPLGQLRVSWRTTLGEAGTLL-SPRVHCSPDVATAFRPVELRLVRPLTASMGLEKXXXXXXXXXXXXXXXLVQGQVYTADCELHNNTEKDLWLQVQFHLDTMQGVYVTGKSFQNAGLVPAHGTQRLTFQLLPLMAGLHDVKGLIILDLVTAQEFQQERLCEVMV 554
            ++  P + V RL+KPRL  +             +    SA T S          P  L +   + DF + S L LP+ FG IYLGETF AY+SV+N +  ++ +  + ++   S +  V L++    R A +   +P PL                  L P ENLD++VEH L+EL  H L + +++     H  G         PR M K ++F V NPVS+     A+  G   ++ Q+ N T+    LLLE   F+ E G+ A +                                     XX                                                    LL  V  FD  V L PE+  Q +Y +RP  +           L A                      LG++ V WRTT GE+G++   P V  +PD     RP     V  L   + L                    G+V      + N + + + LQ+QF  D M GVYV G+SF+N G +      R   QLL L+AGLH+++G  + D+ TAQEF Q +L +++V
Sbjct:    8 TSEQPTLRVMRLYKPRLDGR------------RVLPPCSAATPS---------DPMSLGSTRGEGDFALSSALKLPDSFGNIYLGETFTAYISVLNHMSTTVLVNASLSAKLQSPTGRVDLEDRRTARGASVSRPNPAPL------------------LSPSENLDMIVEHTLEELGTHTLRVTVKY-----HVAG---DPEGSEPRSMRKFYRFSVMNPVSVNPVCTAV-RGSPFVEVQLVNTTQ--MDLLLESCHFIPEGGVEASLLGGGEGGDPLAASPWDEDNETADTARDGGARPPLQGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAPPHDDRCLLTAVERFDGRVLLRPEEGHQLMYSVRPKEETTPPPPGKEGYLDAVRGDARAGGDAGEGGFGEGSHTLGRVEVCWRTTTGESGSIRGGPVVFEAPD-----RPEVEVTVDGLPDVLKL--------------------GRVAECVATVRNRSNRPMTLQLQFRTDGMVGVYVHGQSFRNLGELLPGTFVRCPLQLLALVAGLHELRGCTVADMHTAQEFAQGKLRDILV 520          
BLAST of NO06G01790 vs. NCBI_GenBank
Match: XP_008619272.1 (hypothetical protein SDRG_14890 [Saprolegnia diclina VS20] >EQC27269.1 hypothetical protein SDRG_14890 [Saprolegnia diclina VS20])

HSP 1 Score: 134.4 bits (337), Expect = 1.100e-27
Identity = 119/453 (26.27%), Postives = 194/453 (42.83%), Query Frame = 0
Query:  101 DFLMQSCLALPEEFGKIYLGETFCAYVSVVNTLPCSIYILEAHASLKSSRSTEVPLQNMAATRQADLEGLDPPPLPLPGQWGGLGVSRERPRELRPGENLDVVVEHVLQELDWHYLAIKLEFTSTAKHAGGXXXXXXXXXPRPMMKRFKFKVYNPVSLTTTQKALPTGEVLLQAQVKNITERHTSLLLEDVVFLAEEGLRAEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDLLDCVAAFDRHVYLLPEDVVQYIYRLRPDIQQQQQSQALPLVLAAGIPLGQLRVSWRTTLGEAGTLLSPRVHCSPDVATAFRPVELRLVRPLTASMGLEKXXXXXXXXXXXXXXXLVQGQVYTADCELHNNTEKDLWLQVQFHLDTMQGVYVTGKSFQNAGLVPAHGTQRLTFQLLPLMAGLHDVKGLIILDLVTAQEFQQERLCEVMV 554
            DF + + L LP+ FG IYLGETF +Y+SV+N   C +        L +   T     ++A TR     G  PPP P+P               L  G NLD+ VE+ L E+  H L + + +                   + + K ++F V NP+++ T +  L   E  ++A+++NIT+    L +E V FLA    RA                                                   DR  Y+ PE+ +Q ++++         S  L L L   + LG+L V+W++++GEAG L +             +PV  ++     AS+ +                 L  GQ + A   +HNN  + + LQ+Q   + M G+  +  S QN G+V  +G+ +L  +LLPL+AGL  ++G+ I++L T  E+ QE+   ++V
Sbjct:   32 DFELSNMLLLPDSFGNIYLGETFSSYISVINQFACDL----QQVGLTAKLQTPTTRSDLADTR-VSRGGSTPPPNPMP--------------VLPSGGNLDMAVEYELNEVGVHTLRVGVSYCDPV-----------TLEAKSLRKFYRFNVLNPLTI-TFKHLLIQEESFVEAKIQNITQ--APLHVETVHFLASPPFRAVELATVRDPET----------------------------------------DRQAYVGPEETLQRVFKV--------TSPQLDLSLGT-LNLGRLEVAWKSSMGEAGRLQT-------------QPVMRKVGSLKEASVSI-----------VAPKQPLRVGQPFAATFLVHNNGTRPMNLQLQLRRELMTGIVCSALSHQNVGVVSPNGSTQLDVELLPLIAGLQQIQGVFIVELETHVEYPQEKTLHLLV 378          
BLAST of NO06G01790 vs. NCBI_GenBank
Match: XP_005854189.1 (hypothetical protein NGA_2050620, partial [Nannochloropsis gaditana CCMP526] >XP_005855143.1 hypothetical protein NGA_2050610, partial [Nannochloropsis gaditana CCMP526] >EKU21216.1 hypothetical protein NGA_2050610, partial [Nannochloropsis gaditana CCMP526] >EKU22172.1 hypothetical protein NGA_2050620, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 132.9 bits (333), Expect = 3.300e-27
Identity = 61/79 (77.22%), Postives = 70/79 (88.61%), Query Frame = 0
Query:  479 DLWLQVQFHLDTMQGVYVTGKSFQNAGLVPAHGTQRLTFQLLPLMAGLHDVKGLIILDLVTAQEFQQERLCEVMVVRRS 558
            D+WLQVQFHLD MQGVY+TGKSFQNAG V +HGTQ L F  LPLMAGLHDVKG+ ILD+VTAQE+ Q+RLC+VMV+RRS
Sbjct:    1 DIWLQVQFHLDAMQGVYITGKSFQNAGQVRSHGTQNLLFHFLPLMAGLHDVKGITILDMVTAQEYHQDRLCQVMVLRRS 79          
BLAST of NO06G01790 vs. NCBI_GenBank
Match: OQR85963.1 (hypothetical protein ACHHYP_11136 [Achlya hypogyna])

HSP 1 Score: 132.5 bits (332), Expect = 4.300e-27
Identity = 122/461 (26.46%), Postives = 197/461 (42.73%), Query Frame = 0
Query:  101 DFLMQSCLALPEEFGKIYLGETFCAYVSVVNTLPCSIYILEAHASLKSSRSTEVPLQNMAATRQADLEGLDPPPLPLPGQWGGLGVSRERPRELRPGENLDVVVEHVLQELDWHYLAIKLEFTSTAKHAGGXXXXXXXXXPRPMMKRFKFKVYNPVSLTTTQKALPTGEVLLQAQVKNITERHTSLLLEDVVFLAEEGLRAEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDLLDCVAAFDRHVYLLPEDVVQYIYRLRPDIQQQQQSQALPLVLAAGIPLGQLRVSWRTTLGEAGTLLSPRV--------HCSPDVATAFRPVELRLVRPLTASMGLEKXXXXXXXXXXXXXXXLVQGQVYTADCELHNNTEKDLWLQVQFHLDTMQGVYVTGKSFQNAGLVPAHGTQRLTFQLLPLMAGLHDVKGLIILDLVTAQEFQQERLCEVMV 554
            DF + + L LP+ FG IYLGETF +Y+SV+N   C +        L +   T     ++  TR     G  PPP P+P               L  G NLD+ VE+ L E+  H L + + +                   + + K ++F V NP+++ T +  L   E  ++A+++NIT+    LL+E V FLA    +A                                           L D  ++  R  YL PE+ +Q ++++         S  L L L   + LG+L V+W++ +GEAG L +  V          S  +AT   P  LR+ RP  A+                                + NN  + + LQ+Q   + M G+  +  +FQN G+V A+G+++L  +LLPL+AGL  ++G+ I++L T  EF Q++   ++V
Sbjct:   32 DFELSNMLLLPDSFGNIYLGETFSSYISVINQFACEL----QQVGLTAKLQTPTTRSDLVDTR-VSRGGSTPPPNPMP--------------VLLSGGNLDMAVEYELNEVGVHTLRVGVSYLDPV-----------TLEAKSLRKFYRFNVLNPLTI-TFKHLLIQDESYVEAKIQNITQ--GPLLVETVHFLASPPFQA--------------------------------------VELATLHDPESS--RQAYLAPEETMQRVFKV--------SSPQLDLSLGT-LNLGRLEVAWKSCMGEAGRLQTQPVMRKVGSLKEASVVIATPTHP--LRVGRPFVATF------------------------------VVRNNGARAMNLQLQLRRELMTGIVCSSLAFQNVGVVAANGSKQLQVELLPLIAGLQHIQGVFIVELETQAEFPQDKTVPLLV 378          
BLAST of NO06G01790 vs. NCBI_GenBank
Match: XP_012209716.1 (hypothetical protein SPRG_15149 [Saprolegnia parasitica CBS 223.65] >KDO19568.1 hypothetical protein SPRG_15149 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 131.7 bits (330), Expect = 7.300e-27
Identity = 118/453 (26.05%), Postives = 193/453 (42.60%), Query Frame = 0
Query:  101 DFLMQSCLALPEEFGKIYLGETFCAYVSVVNTLPCSIYILEAHASLKSSRSTEVPLQNMAATRQADLEGLDPPPLPLPGQWGGLGVSRERPRELRPGENLDVVVEHVLQELDWHYLAIKLEFTSTAKHAGGXXXXXXXXXPRPMMKRFKFKVYNPVSLTTTQKALPTGEVLLQAQVKNITERHTSLLLEDVVFLAEEGLRAEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDLLDCVAAFDRHVYLLPEDVVQYIYRLRPDIQQQQQSQALPLVLAAGIPLGQLRVSWRTTLGEAGTLLSPRVHCSPDVATAFRPVELRLVRPLTASMGLEKXXXXXXXXXXXXXXXLVQGQVYTADCELHNNTEKDLWLQVQFHLDTMQGVYVTGKSFQNAGLVPAHGTQRLTFQLLPLMAGLHDVKGLIILDLVTAQEFQQERLCEVMV 554
            DF + + L LP+ FG IYLGETF +Y+SV+N   C +        L +   T     ++A TR     G  PPP P+P               L  G NLD+ VE+ L E+  H L + + +                   + + K ++F V NP+++ T +  L   E  ++A+++NIT+    L +E V FLA    RA                                                   DR  Y+ PE+ +Q ++++         S  L L L   + LG+L V+W++++GEAG+L +             +PV  ++     AS+ +                 L  GQ + A   + NN  + + LQ+Q   + M G+  +  S QN G+V  +G  +L  +LLPL+AGL  ++G+ I++L T  E+ QE+   ++V
Sbjct:   32 DFELSNMLLLPDSFGNIYLGETFSSYISVINQFACDL----QQVGLTAKLQTPTNRSDLADTR-VSRGGSSPPPNPMP--------------LLPSGGNLDMAVEYELNEVGVHTLRVGVSYLD-----------PITLEAKSLRKFYRFNVLNPLTI-TFKHLLIQEESFVEAKIQNITQ--APLHVETVHFLASPPFRAVELATVRDPET----------------------------------------DRQAYVGPEETLQRVFKV--------SSPQLDLSLGT-LNLGRLEVAWKSSMGEAGSLQT-------------QPVMRKVGSLKEASVSI-----------VVPTQPLRVGQPFVATFVVQNNGTRPMNLQLQLRRELMTGIVCSALSHQNVGVVSTNGCTQLDVELLPLIAGLQQIQGVFIVELETLVEYPQEKTLHLLV 378          
BLAST of NO06G01790 vs. NCBI_GenBank
Match: ETI34074.1 (hypothetical protein F443_19338 [Phytophthora parasitica P1569])

HSP 1 Score: 125.6 bits (314), Expect = 5.200e-25
Identity = 126/518 (24.32%), Postives = 215/518 (41.51%), Query Frame = 0
Query:   40 PEIFVRRLFKPRLYDQVSIGAGVARQLASINRRMSAGTSSRNSGGNGFAPPTVLAAEVVQSDFLMQSCLALPEEFGKIYLGETFCAYVSVVNTLPCSIYILEAHASLKSSRSTEVPLQNMAATRQADLEGLDPPPLPLPGQWGGLGVSRERPRELRPGENLDVVVEHVLQELDWHYLAIKLEFTSTAKHAGGXXXXXXXXXPRPMMKRFKFKVYNPVSLTTTQKALPT---GEVLLQAQVKNITERHTSLLLEDVVFLAEEGLRAEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDLLDCVAAFDRHVYLLPEDVVQYIYRLRPDIQQQQQSQALPLVLAAGIPLGQLRVSWRTTLGEAGTLLSPRVHCSPDVATAFRPVELRLVRPLTASMGLEKXXXXXXXXXXXXXXXLVQGQVYTADCELHNNTEKDLWLQVQFHLDTMQGVYVTGKSFQNAGLVPAHGTQRLTFQLLPLMAGLHDVKGLIILDLVTAQEF-QQERLCEVMV 554
            P + V RL+KP+LY Q                          S G    P ++  +   Q +F + S L LP+ FG+I+LG TF +Y+SV+N   C +  +   A+++ + +  V L +    R   L    PPP P+                L  G +LD+VV++ L ++  H L + + +                   + + K ++F V NP+ +T  Q +  +   GE +++AQ++N+++    L ++ + FL      +E                                        E+LL         VY  P++ +Q ++R+  D      S    L       LG+L V W+T++GEAG++ S  V      A+     E+     + A   L K               +V GQ + A   + NN+ + L LQ+QF  + M+G+  +  S QN GL+ A   Q +  +LLP++ GL  + G + +D+ + QEF Q   L  V+V
Sbjct:   30 PTLKVMRLYKPKLYVQ-------------------------GSSGGSMLPMSMDDSSSTQHEFALSSMLILPDSFGEIFLGNTFSSYISVINPYSCELQNVGLSANIQCA-NDRVELHDNRYARTGKL----PPPNPV--------------AILPAGSSLDMVVDYPLNQVGNHVLRVGVAYVDPVTGEN-----------KSLRKFYRFAVQNPLVITFKQNSPASQQQGEAIVEAQIRNVSK--LPLFVDSIKFLPLSPFTSE------------------------EMVVHTVGKKGERPSIEELLSLNNGPQTLVY--PQEELQRVFRVWYD----PASDPSLLTTQGSQNLGRLHVGWKTSMGEAGSVQSQPVMRKVPGASGGGQSEV-----IVAVEELPK--------------DVVVGQPFLAALSVTNNSTRSLALQLQFRKEIMRGIVCSSASHQNLGLMEAKTMQTVWIELLPIVGGLQMLGGPVCVDIRSGQEFTQASALAHVLV 441          
BLAST of NO06G01790 vs. NCBI_GenBank
Match: ETL81119.1 (hypothetical protein L917_18485 [Phytophthora parasitica] >ETP32131.1 hypothetical protein F442_19110 [Phytophthora parasitica P10297])

HSP 1 Score: 125.6 bits (314), Expect = 5.200e-25
Identity = 126/518 (24.32%), Postives = 215/518 (41.51%), Query Frame = 0
Query:   40 PEIFVRRLFKPRLYDQVSIGAGVARQLASINRRMSAGTSSRNSGGNGFAPPTVLAAEVVQSDFLMQSCLALPEEFGKIYLGETFCAYVSVVNTLPCSIYILEAHASLKSSRSTEVPLQNMAATRQADLEGLDPPPLPLPGQWGGLGVSRERPRELRPGENLDVVVEHVLQELDWHYLAIKLEFTSTAKHAGGXXXXXXXXXPRPMMKRFKFKVYNPVSLTTTQKALPT---GEVLLQAQVKNITERHTSLLLEDVVFLAEEGLRAEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDLLDCVAAFDRHVYLLPEDVVQYIYRLRPDIQQQQQSQALPLVLAAGIPLGQLRVSWRTTLGEAGTLLSPRVHCSPDVATAFRPVELRLVRPLTASMGLEKXXXXXXXXXXXXXXXLVQGQVYTADCELHNNTEKDLWLQVQFHLDTMQGVYVTGKSFQNAGLVPAHGTQRLTFQLLPLMAGLHDVKGLIILDLVTAQEF-QQERLCEVMV 554
            P + V RL+KP+LY Q                          S G    P ++  +   Q +F + S L LP+ FG+I+LG TF +Y+SV+N   C +  +   A+++ + +  V L +    R   L    PPP P+                L  G +LD+VV++ L ++  H L + + +                   + + K ++F V NP+ +T  Q +  +   GE +++AQ++N+++    L ++ + FL      +E                                        E+LL         VY  P++ +Q ++R+  D      S    L       LG+L V W+T++GEAG++ S  V      A+     E+     + A   L K               +V GQ + A   + NN+ + L LQ+QF  + M+G+  +  S QN GL+ A   Q +  +LLP++ GL  + G + +D+ + QEF Q   L  V+V
Sbjct:   30 PTLKVMRLYKPKLYVQ-------------------------GSSGGSMLPMSMDDSSSTQHEFALSSMLILPDSFGEIFLGNTFSSYISVINPYSCELQNVGLSANIQCA-NDRVELHDNRYARTGKL----PPPNPV--------------AILPAGSSLDMVVDYPLNQVGNHVLRVGVAYVDPVTGEN-----------KSLRKFYRFAVQNPLVITFKQNSPASQQQGEAIVEAQIRNVSK--LPLFVDSIKFLPLSPFTSE------------------------EMVVHTVGKKGERPSIEELLSLNNGPQTLVY--PQEELQRVFRVWYD----PASDPSLLTTQGSQNLGRLHVGWKTSMGEAGSVQSQPVMRKVPGASGGGQSEV-----IVAVEELPK--------------DVVVGQPFLAALSVTNNSTRSLALQLQFRKEIMRGIVCSSASHQNLGLMEAKTMQTVWIELLPIVGGLQMLGGPVCVDIRSGQEFTQASALAHVLV 441          
BLAST of NO06G01790 vs. NCBI_GenBank
Match: ETM34307.1 (hypothetical protein L914_18579 [Phytophthora parasitica])

HSP 1 Score: 125.6 bits (314), Expect = 5.200e-25
Identity = 126/518 (24.32%), Postives = 215/518 (41.51%), Query Frame = 0
Query:   40 PEIFVRRLFKPRLYDQVSIGAGVARQLASINRRMSAGTSSRNSGGNGFAPPTVLAAEVVQSDFLMQSCLALPEEFGKIYLGETFCAYVSVVNTLPCSIYILEAHASLKSSRSTEVPLQNMAATRQADLEGLDPPPLPLPGQWGGLGVSRERPRELRPGENLDVVVEHVLQELDWHYLAIKLEFTSTAKHAGGXXXXXXXXXPRPMMKRFKFKVYNPVSLTTTQKALPT---GEVLLQAQVKNITERHTSLLLEDVVFLAEEGLRAEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDLLDCVAAFDRHVYLLPEDVVQYIYRLRPDIQQQQQSQALPLVLAAGIPLGQLRVSWRTTLGEAGTLLSPRVHCSPDVATAFRPVELRLVRPLTASMGLEKXXXXXXXXXXXXXXXLVQGQVYTADCELHNNTEKDLWLQVQFHLDTMQGVYVTGKSFQNAGLVPAHGTQRLTFQLLPLMAGLHDVKGLIILDLVTAQEF-QQERLCEVMV 554
            P + V RL+KP+LY Q                          S G    P ++  +   Q +F + S L LP+ FG+I+LG TF +Y+SV+N   C +  +   A+++ + +  V L +    R   L    PPP P+                L  G +LD+VV++ L ++  H L + + +                   + + K ++F V NP+ +T  Q +  +   GE +++AQ++N+++    L ++ + FL      +E                                        E+LL         VY  P++ +Q ++R+  D      S    L       LG+L V W+T++GEAG++ S  V      A+     E+     + A   L K               +V GQ + A   + NN+ + L LQ+QF  + M+G+  +  S QN GL+ A   Q +  +LLP++ GL  + G + +D+ + QEF Q   L  V+V
Sbjct:   30 PTLKVMRLYKPKLYVQ-------------------------GSSGGSMLPMSMDDSSSTQHEFALSSMLILPDSFGEIFLGNTFSSYISVINPYSCELQNVGLSANIQCA-NDRVELHDNRYARTGKL----PPPNPV--------------AILPAGSSLDMVVDYPLNQVGNHVLRVGVAYVDPVTGEN-----------KSLRKFYRFAVQNPLVITFKQNSPASQQQGEAIVEAQIRNVSK--LPLFVDSIKFLPLSPFTSE------------------------EMVVHTVGKKGERPSIEELLSLNNGPQTLVY--PQEELQRVFRVWYD----PASDPSLLTTQGSQNLGRLHVGWKTSMGEAGSVQSQPVMRKVPGASGGGQSEV-----IVAVEELPK--------------DVVVGQPFLAALSVTNNSTRSLALQLQFRKEIMRGIVCSSASHQNLGLMEAKTMQTVWIELLPIVGGLQMLGGPVCVDIRSGQEFTQASALAHVLV 441          
The following BLAST results are available for this feature:
BLAST of NO06G01790 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26215.11.800e-15859.27Protein of unknown function DUF974 [Nannochloropsi... [more]
XP_005854188.13.300e-8858.38hypothetical protein NGA_2027520, partial [Nannoch... [more]
CBN74908.11.800e-3026.19conserved unknown protein [Ectocarpus siliculosus][more]
XP_008619272.11.100e-2726.27hypothetical protein SDRG_14890 [Saprolegnia dicli... [more]
XP_005854189.13.300e-2777.22hypothetical protein NGA_2050620, partial [Nannoch... [more]
OQR85963.14.300e-2726.46hypothetical protein ACHHYP_11136 [Achlya hypogyna... [more]
XP_012209716.17.300e-2726.05hypothetical protein SPRG_15149 [Saprolegnia paras... [more]
ETI34074.15.200e-2524.32hypothetical protein F443_19338 [Phytophthora para... [more]
ETL81119.15.200e-2524.32hypothetical protein L917_18485 [Phytophthora para... [more]
ETM34307.15.200e-2524.32hypothetical protein L914_18579 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000279NSK000279Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G01790.1NO06G01790.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|597152gene_6487Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100025g9gene4322Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G01790.1NO06G01790.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G01790 ID=NO06G01790|Name=NO06G01790|organism=Nannochloropsis oceanica|type=gene|length=2592bp
CAGCACAGGCATATTTTTCCGCGGGCCTGGACAATCATAGCATGGCGTCT
TCTGGAGGGCAGCCGCTGCCACTACCACCACCTTTGCTACCACAACCGCA
GCAACAGCAACAACAGCAGCATCAGCAGCGGCAAGCTAGTAACTGCAGCA
CGGCCAACCCGGAGATCTTTGTGCGGCGGTTGTTCAAGCCGCGGCTCTAC
GACCAGGTCAGTATTGGGGCCGGCGTGGCGAGGCAACTCGCTTCCATTAA
CCGACGCATGAGCGCGGGAACCAGCAGCAGAAATAGCGGTGGCAACGGGT
TTGCCCCACCCACAGTCCTAGCTGCCGAAGTGGTCCAATCTGATTTTCTG
ATGCAATCATGCCTGGCACTGCCTGAGGAGTTTGGAAAAATTTACTTAGG
CGAGACGTTTTGTGCCTACGTCTCCGTTGTCAATACCCTGCCGTGTTCCA
TCTACATCCTCGAAGCCCATGCCTCCCTCAAGAGCTCTAGAAGCACCGAG
GTACCCTTGCAAAATATGGCGGCGACACGTCAAGCAGATTTAGAGGGGCT
TGACCCACCACCTCTACCTTTACCCGGACAGTGGGGAGGACTTGGCGTGA
GTCGGGAGCGGCCTCGCGAGCTGCGACCCGGAGAGAATCTAGACGTAGTG
GTAGAGCATGTCTTACAAGAATTAGACTGGCATTATCTGGCCATCAAGCT
TGAGTTTACGTCAACGGCTAAGCATGCAGGCGGAGGAGGGGTAGGGTTTG
GAGGAGAGGGACCAAGACCGATGATGAAACGATTTAAATTCAAGGTGTAC
AATCCGGTGTCATTGACGACGACTCAAAAAGCCTTACCTACGGGGGAAGT
GCTCCTGCAGGCACAGGTGAAGAATATCACGGAGCGACACACGAGTTTGC
TATTGGAGGATGTGGTGTTTCTGGCAGAGGAAGGCTTGAGGGCAGAAATG
GTGGTGGTGCCGTCGTCGAAGGATGTCGTGAGAAGAAGGAGAGGAGGTGG
AGTGAGCAGAAGCAGCAGCGAAACGAGAAAGGAGAATGAGTACGACATCG
ATGATAGTGAAGAGGACGAAGATCTCTTGGATTGTGTGGCTGCATTTGAT
CGGCACGTCTATCTACTACCAGAGGACGTTGTTCAGTACATATATCGCCT
CCGTCCCGACATCCAACAGCAGCAGCAGAGCCAAGCGCTACCACTTGTCC
TCGCTGCAGGTATCCCTTTAGGGCAGCTCCGAGTCTCCTGGCGGACGACC
TTGGGAGAGGCAGGGACATTGTTAAGCCCCCGTGTACATTGCTCGCCAGA
TGTAGCCACAGCATTCCGTCCCGTAGAGCTGCGGCTAGTCCGACCTTTAA
CTGCCTCCATGGGACTGGAAAAGGAGGAAAAACAGCAGGATGAAGAAGAG
GGAGAGGGAGCAGGAGTATTGGTCCAGGGACAGGTATACACGGCGGATTG
TGAGTTGCACAACAACACAGAAAAGGACTTGTGGCTTCAGGTGCAGTTTC
ATCTGGATACCATGCAAGGCGTGTATGTAACAGGGAAATCGTTTCAAAAT
GCGGGTCTTGTCCCTGCCCATGGGACGCAGAGGCTTACCTTTCAGTTGTT
GCCGCTGATGGCGGGATTGCATGATGTAAAGGGGTTGATAATATTAGACT
TGGTTACTGCTCAGGAATTTCAGCAGGAGAGACTATGTGAGGTGATGGTT
GTGCGGAGATCTGGTTCCTCGGTGGGGTATGGGAAGCAGAGGGGGCAGCA
GCAGGAGTCATTGGTGAGGGTGGATCATTCTTGGGGGAACAACTAGAAAC
AAAAATGTAAATTCAAAGACCTCGTAGGCTCTACTTTTATTTTGCGATGG
TACTTTTTTTAGACTTCTCATACATACATCTTTTCACCTGTACAATTATC
TTCTTGATCTACGTTTTCCATGGGATTAATATCTTCTTGATCTACGCTTT
CCATCCCATGGAAAACGTGATGTATCATTATCACTTTTGAGTGTATATCT
TCTGGGATTTGGGTCGCGGAATGGGATTTGGGACGAAATTTTCCCGATCA
TGCCCTACGCAGATAGAGAATGCCTACTAGGATCTTTTTCGCTGACACTT
ACATTTCATTCCTTCTTTTGAGCCTTCCTTCCTTCCTTCTTCATGGTTGT
TATCTCTCCCATCCCCTCATCCCGTTCTTCCCTCGATCCCATCTTTGTCT
TCTTCCTCTCACTTGACTTCTCTCATCCTCCTTTTCATCTTGTTCTTCTT
CTTCTTCTTCTTCTTTTCTTCTTCTTGCTACTCTTCTTCTTCTTCTTCTT
CTTCTTCTTCTTCTTCTTCTTTATCTTCTTCTTCTTGTTCATCTTCCTAA
CTCTTCTTCTTCATCATCATTATCATCTTCTTCTTCTTCTTCTTCATCCT
AACAACTCTTCTTCTTCTTCTTCATAACTCTTCTTCTTCTTCTTCTTCCT
CTTGGTCCTCTTTTCTTCTTACCTTTTTTCCCTATTCTTTATCTTCTCTT
TATTCTTTTCTCCTAAATTTTGCGCTTTTCCTTATTCTCCTCTTTTTATT
CTCTTCTTCACACCTTTCTATTTTTATTCGTCCTGTTCTTTT
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protein sequence of NO06G01790.1

>NO06G01790.1-protein ID=NO06G01790.1-protein|Name=NO06G01790.1|organism=Nannochloropsis oceanica|type=polypeptide|length=585bp
MASSGGQPLPLPPPLLPQPQQQQQQQHQQRQASNCSTANPEIFVRRLFKP
RLYDQVSIGAGVARQLASINRRMSAGTSSRNSGGNGFAPPTVLAAEVVQS
DFLMQSCLALPEEFGKIYLGETFCAYVSVVNTLPCSIYILEAHASLKSSR
STEVPLQNMAATRQADLEGLDPPPLPLPGQWGGLGVSRERPRELRPGENL
DVVVEHVLQELDWHYLAIKLEFTSTAKHAGGGGVGFGGEGPRPMMKRFKF
KVYNPVSLTTTQKALPTGEVLLQAQVKNITERHTSLLLEDVVFLAEEGLR
AEMVVVPSSKDVVRRRRGGGVSRSSSETRKENEYDIDDSEEDEDLLDCVA
AFDRHVYLLPEDVVQYIYRLRPDIQQQQQSQALPLVLAAGIPLGQLRVSW
RTTLGEAGTLLSPRVHCSPDVATAFRPVELRLVRPLTASMGLEKEEKQQD
EEEGEGAGVLVQGQVYTADCELHNNTEKDLWLQVQFHLDTMQGVYVTGKS
FQNAGLVPAHGTQRLTFQLLPLMAGLHDVKGLIILDLVTAQEFQQERLCE
VMVVRRSGSSVGYGKQRGQQQESLVRVDHSWGNN*
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Synonyms
Publications