NO06G01750, NO06G01750 (gene) Nannochloropsis oceanica

Overview
NameNO06G01750
Unique NameNO06G01750
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1830
Alignment locationchr6:539200..541029 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:539200..541029 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO06G01750 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR057ncniR057Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR028ncniR028Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G01750.1NO06G01750.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G01750.1NO06G01750.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G01750 ID=NO06G01750|Name=NO06G01750|organism=Nannochloropsis oceanica|type=gene|length=1830bp
ATGTTTTCTTTTGCGGGCTTGACGGGGCCAGGGCAGGCGAAGCCCATTAT
CGCGTATGGGGCGGGGATTTTCTTGCACACAGGCAAGGAAGAGGTGAGCG
TTCCGGTGAAGAGGGTGCTGCGGgtgcgaaaagtactaccgaacagtgtt
cgtacccgagcacctgacgacaaaggtacacctcgattgtgggcagCGTC
TAAACCCAATTGCGAGAAGGGCAGAAGGAGAAGGAGGTGAAGGAGGAGAG
GGAGGAGAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AAGAAGAGGAGGTGGAGGAGGAGGTGGTGGAGGAGGAGGAGGAGGGGAAG
GAGGAGGAGGAGGAGGAGGGGAAGGAGAAGGGGGAGGAAGAAGAGGGAAT
AGAACCCGGGCTGCGGAAGCAGCAGCAGCCGCCCGGATGCGGCTGACCAT
ACAGATGGCACTTGCTGAAGCACGAGCCCGGGCAGCTGCAGGAGGAGGAG
GAGGAGGGGGAAGGGATAGCAGGATGGATACAGGAGGGGATCCTGGAAGG
GTAGGAGTGAGAGGAGTCGGGGCGGCCGAAGCGGCAACAGGAGGAGGAGG
AGAGGGAACGAGAGGAATACCTACTTTGCTCTCTTTACCCGGAGAAAAGG
CAACACGAGCACTAGCAACCATTGCTAGACTTCGCACGGCACTTGCAAGA
GGAAGGGAGAAGGGAAAGAGAAAGATAGTGAGGGCGCTCCGACGAGGAGG
AAGAGTGAGAGGGGAAGAAGGAGGAGGACGAGGGGAAGGACGAGGGGAAA
GAGGGGCAGCAGGACGAAGGGAAAGGGGGCCAGGAGGAGGAGGGGGAGGA
GAAGGAGGAGGAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAGG
AGGAGGAGGAGAAGGAGGAGGAGGAGGAGAGGAAGAAGAAGAGGAAGAAG
AAGAAGAGGGAGAAGAAGAGGGAGAAGAAGAGGAGGAGGAAAAGGAAGAT
GAGGAAGAAGGAGGAGAGGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGA
AGACGAACAAGAAGAAGGAGAAGGAGAGGAAGAAGAAGAAGAAGAAGAAG
AAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAGGAAGAAGAAGAAGAAGAA
GAGGAGGAAGAGGAAGAAGAAGAAGGGGGAGGAGGAGGAGGGGGAGGAGG
AGGGAGACGAGGAGGGGATGGAAGGGGAAGGGGAGGAGGAGGAGGAGGTG
GTGGAAGCAGAGGAGGAGGAGGGGGGGAAGGTGGAGGAGGAGGAGAACGG
GGAGGAGGAGGAAGGGAAAGGGGAGGAGGAGGCAGAGGCGGAGGAGGCGG
AGGAGGCGGAGGAGGCGGAGGAGGACGAGGACGAGGCAGAGGAGGAGGTC
ATGGGTGGGCCATCCGAGGACTTTGTTGGTGTGACACCTGTGAACACTTT
GTGTCTCGGGACGGCAATGGGGCACGTAACATCCTGCGGGTGTACAGGAG
TATGGTCCGTGGGGAAGCTCGTCCCCATGATCTTCGGTTTGGTCAACCGC
GGCAAGATATGCGGACACTCTATGTGTAGCGTTCCCGCTGACATCCTCTT
TTATCCTCCTTCCCCCCCTCCTGCTGGCCCTGTGTGGGCCGTCCGGGGAC
TTTGCCTGGTCAAAAAACCTGTCAAAGTCGCTAGTAAAACTCGGACAAGG
AATAAGGGGTGAATATGCAACAATTTCTTGTTGGAAGGCTCCCCCTCGTA
TGCAAGTCCTAGAGGACGCAGGGTGCATGCGATAGTTTTAGAGGGATGTA
GGAACGGCAAAAAGAACTACGCAGAAGCCA
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protein sequence of NO06G01750.1

>NO06G01750.1-protein ID=NO06G01750.1-protein|Name=NO06G01750.1|organism=Nannochloropsis oceanica|type=polypeptide|length=502bp
MFSFAGLTGPGQAKPIIAYGAGIFLHTGKEEVSVPVKRVLRRLNPIARRA
EGEGGEGGEGGEEGGGGGGGGGGGGGRRGGGGGGGGGGGGGEGGGGGGGE
GEGGGRRGNRTRAAEAAAAARMRLTIQMALAEARARAAAGGGGGGGRDSR
MDTGGDPGRVGVRGVGAAEAATGGGGEGTRGIPTLLSLPGEKATRALATI
ARLRTALARGREKGKRKIVRALRRGGRVRGEEGGGRGEGRGERGAAGRRE
RGPGGGGGGEGGGEGGGGGGGGGGEGGGGEGGGGGEEEEEEEEEEGEEEG
EEEEEEKEDEEEGGEEEEEEEEEEEEDEQEEGEGEEEEEEEEEEEEEEEE
EEEEEEEEEEEEEEEEEGGGGGGGGGGRRGGDGRGRGGGGGGGGSRGGGG
GEGGGGGERGGGGRERGGGGRGGGGGGGGGGGGGRGRGRGGGHGWAIRGL
CWCDTCEHFVSRDGNGARNILRVYRSMVRGEARPHDLRFGQPRQDMRTLY
V*
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Synonyms
Publications