NO06G01680, NO06G01680 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO06G01680 vs. NCBI_GenBank
Match: EWM26244.1 (hypothetical protein Naga_100025g1 [Nannochloropsis gaditana]) HSP 1 Score: 147.1 bits (370), Expect = 7.200e-32 Identity = 84/148 (56.76%), Postives = 98/148 (66.22%), Query Frame = 0
Query: 7 LPDLSFPPARRPSSDSIPPRSCPPSFPEEAGDTSILYQAVKSLYDLSGDVKEVYNMHYIPETASFIDPVVMVKNSTSDCIGQFRALRGLFSKAEIETHSVTRGGNKLVIDWKITYYPRILPS-FCAISVHTITILTLMEPDEGTPERG 154
LP L RP S PP S S E D ++LY AVKSLYDL+GDVK V+ HY+PETASFIDP+V V + T C+GQFRALRGLFS+AEI+T SVTRGGN LVIDW+I Y+PR LPS C +S H + D G ERG
Sbjct: 10 LPTLIPVSPSRPHSR--PPHSRTVS-KESMNDATVLYTAVKSLYDLTGDVKAVFGKHYVPETASFIDPLVTVTHDTKACVGQFRALRGLFSRAEIKTRSVTRGGNHLVIDWQIKYFPRGLPSPVCLLSAHHHNL------DLGDRERG 148
BLAST of NO06G01680 vs. NCBI_GenBank
Match: OLP94698.1 (hypothetical protein AK812_SmicGene23244 [Symbiodinium microadriaticum]) HSP 1 Score: 92.0 bits (227), Expect = 2.800e-15 Identity = 57/161 (35.40%), Postives = 83/161 (51.55%), Query Frame = 0
Query: 42 LYQAVKSLYDLSGDVKEVYNMHYIPETASFIDPVVMVKNSTSDCIGQFRALRGLFSKAEIETHSVTRGGNKLVIDWKITYYPRILPSFCAISVHTITILTLMEPDEGTPERGKASTRILEHVDHWSVHELISSVPIVSFVYTSLWRPAVGKGSSVLTNVLY 203
L +A SLYDL D V + Y + F DP+V+V + TS QFR+LR LF + + + G KLVI+ ITY P+ +P CA+ + T LT + RIL H DHWS+H ++ ++ ++Y S WR +G SSV ++Y
Sbjct: 17 LAKAACSLYDLQVDSDAVVDSMY-ASSCKFSDPLVLV-SGTSHVKAQFRSLRMLFREIDFHVDGIGLLGEKLVIEATITYVPKFMPRACALRLKQFTTLT------------STAGRILLHEDHWSIHGVLVAIAGFGWLYQS-WRQLLGTASSVAVELVY 162
BLAST of NO06G01680 vs. NCBI_GenBank
Match: XP_009839928.1 (hypothetical protein H257_13932 [Aphanomyces astaci] >ETV70545.1 hypothetical protein H257_13932 [Aphanomyces astaci]) HSP 1 Score: 74.7 bits (182), Expect = 4.600e-10 Identity = 51/166 (30.72%), Postives = 82/166 (49.40%), Query Frame = 0
Query: 35 EAGDTSILYQAVKSLYDLSGDVKEVYNMHYIPETASFIDPVVMVKNSTSDCIGQFRALRGLFSKAEIE-THSVTRGGNKLVIDWKITYYPRILPSFCAISVHTITILTLMEPDEGTPERGKASTRILEHVDHWSVHELISSVPIVSFVYTSLWRPAVGKGSSVLTN 200
E G + + S+YD + D + Y P+ ASF DP V V + + FRA+ + SK++ E G + L ID K+T+ + PS+ + T++ L + +I++H DHW ++ ++ S+PIVSFVY ++R A G SS L N
Sbjct: 15 EMGMAQAMTLKILSMYDRATDSDAIVQELYHPD-ASFSDPWVEV-HGRENVAAHFRAIPSVISKSQAELIRGSMAGVSVLTIDSKVTFRFKPFPSYLGCTFRMFTVVELED------------QQIIKHTDHWDLNTVLESIPIVSFVY-RIFRTAFGNASSHLIN 165
BLAST of NO06G01680 vs. NCBI_GenBank
Match: XP_009839929.1 (hypothetical protein, variant [Aphanomyces astaci] >ETV70546.1 hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 74.7 bits (182), Expect = 4.600e-10 Identity = 51/166 (30.72%), Postives = 82/166 (49.40%), Query Frame = 0
Query: 35 EAGDTSILYQAVKSLYDLSGDVKEVYNMHYIPETASFIDPVVMVKNSTSDCIGQFRALRGLFSKAEIE-THSVTRGGNKLVIDWKITYYPRILPSFCAISVHTITILTLMEPDEGTPERGKASTRILEHVDHWSVHELISSVPIVSFVYTSLWRPAVGKGSSVLTN 200
E G + + S+YD + D + Y P+ ASF DP V V + + FRA+ + SK++ E G + L ID K+T+ + PS+ + T++ L + +I++H DHW ++ ++ S+PIVSFVY ++R A G SS L N
Sbjct: 15 EMGMAQAMTLKILSMYDRATDSDAIVQELYHPD-ASFSDPWVEV-HGRENVAAHFRAIPSVISKSQAELIRGSMAGVSVLTIDSKVTFRFKPFPSYLGCTFRMFTVVELED------------QQIIKHTDHWDLNTVLESIPIVSFVY-RIFRTAFGNASSHLIN 165
BLAST of NO06G01680 vs. NCBI_GenBank
Match: KNE54790.1 (hypothetical protein AMAG_00744 [Allomyces macrogynus ATCC 38327]) HSP 1 Score: 67.0 bits (162), Expect = 9.500e-8 Identity = 53/175 (30.29%), Postives = 84/175 (48.00%), Query Frame = 0
Query: 33 PEEAGDTSILYQAVKSLYDLSGDVKEVYNMHYIPETASFIDPVVMVKNSTSDCI-GQFRALRGLFSKAEIETHSVTRG----GNKLV-IDWKITYYPRILPSFCAISVHTITILTLMEPDEGTPERGKASTRILEHVDHWSVHELISSVPIVSFVYTSLWRPAVGKGSSVLTNVL 202
P I ++Y + D + Y+ E A+F DP+V+ +TSD + F + F+ E + SVT G GN +V +D I Y R+LP ++V T++ + D G S R++ H D WSV +L+ +PIV +Y+SL RP +S+L +L
Sbjct: 43 PRPPAPRDIALNVHAAMYSVQPDAQAAAARDYLDENATFADPIVIA--ATSDSVKTAFMGNKLAFALVEPKITSVTEGTDDAGNHVVAVDADIAYTLRLLP--IKLTVRTLSKFVI---DSG-------SNRVVFHEDIWSVADLMEQIPIVGTLYSSLARPFASSMTSMLVAML 203
BLAST of NO06G01680 vs. NCBI_GenBank
Match: GAX92641.1 (Hypothetical protein PINS_000532 [Pythium insidiosum]) HSP 1 Score: 66.6 bits (161), Expect = 1.200e-7 Identity = 50/158 (31.65%), Postives = 78/158 (49.37%), Query Frame = 0
Query: 42 LYQAVKSLYDLSGDVKEVYNMHYIPETASFIDPVVMVKNSTSDCIGQFRALRGLF--SKAEIETHSVTRGGNKLVIDWKITYYPRILPSFCAISVHTITILTLMEPDEGTPERGKASTRILEHVDHWSVHELISSVPIVSFVYTSLWRPAVGKGSSVL 198
L +++ SLYD+S E+ Y + A F DP++ VK + QFR+L SKA + S+ G + L ID Y + PS + + +++ L + GK + H DHW V+ +IS++PIVSF+Y +RP G SS +
Sbjct: 9 LAESILSLYDVSTATDEIIAKLYHAD-AVFSDPMIQVK-GVENVQAQFRSLPKFIKSSKATLVRGSMA-GSSVLTIDSSQVYRLKPFPSLFKVVLRVFSVIEL--------KNGK----VASHTDHWDVYSVISNIPIVSFLYNQ-FRPMFGAASSAV 150
BLAST of NO06G01680 vs. NCBI_GenBank
Match: XP_008619540.1 (hypothetical protein SDRG_15154 [Saprolegnia diclina VS20] >EQC27040.1 hypothetical protein SDRG_15154 [Saprolegnia diclina VS20]) HSP 1 Score: 64.7 bits (156), Expect = 4.700e-7 Identity = 46/167 (27.54%), Postives = 77/167 (46.11%), Query Frame = 0
Query: 35 EAGDTSILYQAVKSLYDLSGDVKEVYNMHYIPETASFIDPVVMVKNSTSDCIGQFRALRGLFSKAEIE-THSVTRGGNKLVIDWKITYYPRILPSFCAISVHTITILTLMEPDEGTPERGKASTRILEHVDHWSVHELISSVPIVSFVYTSLWRPAVGKGSSVLTNV 201
E G + + SLYD + +V + Y PE A+F DP+V V + QFR L +++ G + L ID +TY + P + ++ T++ L + +++ H DHW + ++ +VP++SF Y L R +VG SS + NV
Sbjct: 16 EMGMAQRMTLKILSLYDSTTNVDAIIQELYHPE-ATFSDPLVEV-SGRDKVAAQFRVLPSFVAQSHATLIRGSMAGVSILTIDSTVTYKLKPFPEYMGGALRMFTVIELED------------QKVISHTDHWDIRSVLENVPMLSFFYRHL-RTSVGSASSHVINV 167
BLAST of NO06G01680 vs. NCBI_GenBank
Match: XP_012206371.1 (hypothetical protein SPRG_11779 [Saprolegnia parasitica CBS 223.65] >KDO22935.1 hypothetical protein SPRG_11779 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 64.7 bits (156), Expect = 4.700e-7 Identity = 46/167 (27.54%), Postives = 77/167 (46.11%), Query Frame = 0
Query: 35 EAGDTSILYQAVKSLYDLSGDVKEVYNMHYIPETASFIDPVVMVKNSTSDCIGQFRALRGLFSKAEIE-THSVTRGGNKLVIDWKITYYPRILPSFCAISVHTITILTLMEPDEGTPERGKASTRILEHVDHWSVHELISSVPIVSFVYTSLWRPAVGKGSSVLTNV 201
E G + + SLYD + +V + Y PE A+F DP+V V + QFR L +++ G + L ID +TY + P + ++ T++ L + +++ H DHW + ++ +VP++SF Y L R +VG SS + NV
Sbjct: 16 EMGMAQRMTLKILSLYDSTTNVDAIIQELYHPE-ATFSDPLVEV-SGRDKVAAQFRVLPSFVAQSHATLIRGSMAGVSILTIDSTVTYKLKPFPEYMGGALRMFTVIELED------------QKVISHTDHWDIRSVLENVPMLSFFYRHL-RTSVGSASSHVINV 167
BLAST of NO06G01680 vs. NCBI_GenBank
Match: CEM35036.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 64.7 bits (156), Expect = 4.700e-7 Identity = 45/177 (25.42%), Postives = 77/177 (43.50%), Query Frame = 0
Query: 38 DTSILYQAVKSLYDLSGDVKEVYNMHYIPETASFIDPVVMVKNSTSDCIGQFRALRGLFSKAEI--------ETHSVTRGGNKLVIDWKITYYPRILPSFCAISVHTITILTLMEPDEGTPERGKASTRILEHVDHWSVHELISSVPIVSFVYTSLWRPAVGKGSSVLTNVLYGLFV 207
DT L + ++++Y ++ A F DP++ V + D QF +LR LFSK E T ++ K+ Y R++P I T ++ +++T+I HVD WS+ L S + I+ +Y + WRP++G+ +S L G +V
Sbjct: 9 DTGKLLKQLETVYSAPFGEADLVIAALYDADAQFEDPIMKV-SGIDDVRSQFLSLRTLFSKVEFIGEPTLLTPTQDALPSPPSVLFKAKVRYTFRLIPLSLTIVQTTHVVM------------DESATKITSHVDEWSLASLFSGITILGRIYDAYWRPSIGRLTSWLIRQSIGFYV 172
BLAST of NO06G01680 vs. NCBI_GenBank
Match: OQR92141.1 (hypothetical protein ACHHYP_04059 [Achlya hypogyna]) HSP 1 Score: 64.3 bits (155), Expect = 6.200e-7 Identity = 45/167 (26.95%), Postives = 75/167 (44.91%), Query Frame = 0
Query: 35 EAGDTSILYQAVKSLYDLSGDVKEVYNMHYIPETASFIDPVVMVKNSTSDCIGQFRALRGLFSKAEIE-THSVTRGGNKLVIDWKITYYPRILPSFCAISVHTITILTLMEPDEGTPERGKASTRILEHVDHWSVHELISSVPIVSFVYTSLWRPAVGKGSSVLTNV 201
E G + + SLYD + +V + Y P+ A+F DP+V V+ QFR L +++ G + L ID +TY + P + ++ T++ L + +++ H DHW + +I +VP+ SF Y L R +G SS + NV
Sbjct: 14 EMGMAQRMTLKILSLYDSTTNVDAIVQELYHPD-ATFSDPLVEVR-GRDKVAAQFRVLPSFVAQSHATLIRGSMAGVSILTIDSTVTYKLKPFPEYMGGALRMFTVIELED------------QKVISHTDHWDIRSVIENVPVASFFYRHL-RTTIGSASSHVINV 165 The following BLAST results are available for this feature:
BLAST of NO06G01680 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 11
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G01680 ID=NO06G01680|Name=NO06G01680|organism=Nannochloropsis oceanica|type=gene|length=759bpback to top protein sequence of NO06G01680.1 >NO06G01680.1-protein ID=NO06G01680.1-protein|Name=NO06G01680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=253bpback to top Synonyms
Publications
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