NO06G01660, NO06G01660 (gene) Nannochloropsis oceanica

Overview
NameNO06G01660
Unique NameNO06G01660
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1377
Alignment locationchr6:516990..518366 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:516990..518366 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036443Znf_RanBP2_sf
IPR001876Znf_RanBP2
Homology
The following BLAST results are available for this feature:
BLAST of NO06G01660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR057ncniR057Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G01660.1NO06G01660.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G01660.1NO06G01660.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G01660 ID=NO06G01660|Name=NO06G01660|organism=Nannochloropsis oceanica|type=gene|length=1377bp
ATGGTCAAGCCCGGCAAGAGCACGGGCACAGATAGGGATGGAGGAAGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTAGAGGTGGAGGTGGAGGAG
GAGGAGGTGGAGAGGGAGGAGGAAACGGAGGAAGAGCAGGAGCAGGAGCA
GGAGCAGGAGTAGGAAGCGAAGCAGAAAGTCTCCTCTCCCCGCAGGACGA
GCGGGTCAACCAGCAGGGCCTCAAGTGGAGATGTGAGGCTTGTACCTTTG
CGAACTCCCTCCTGCTCAAGAAGTGTGAAATCTGCGAGACAGAACGCCGG
ATGGCCCGTCGACTGCTTCAGCTTGTGGATACAAACGGCAATGCAGTTGA
GAATAGTGGAAAGTTCTTCTCGCCTACCCCTCCTCCTAATAAGAGAAGAG
GAGGAAGCGGAGCAGCAGCAGCAGCAGCAGCAGCAATGAAAGGCACCCGA
AAAATAGCCGTTGCCAAGTCTTTGCCGGAGTTTAATTTAGTAAAAGAGGT
GGAGGACGACGACGAGAAGGAGAAGGAGGAGGAGGAGGAGGAAGGGATAG
AGGAGAGGGGCGATTGTGACGTGAGCGATAACGATGATGCGTTAGGGTGG
AGAAAGGGGGCTGGCGGCAAAAGTAGAAAGTCCGCTGCTAGAGGCGACAT
TACTTATGATGGGGCCAATCAGGGTAAGGGGAAGGAGAACGCAGACAAAG
ACACCAACGTGGAGCCTTCTGTTGCAGCAGCAACTGGTAGCAGCAGCAGC
AGCAGCACGCTGAGAAAAAGAAAACGTGTCCGGCGGCAGTCGATGGAGAG
TAGCGATGAGTCGAGCGGCAGTGAGGAATTGATGGTAGTGGAGGAGAAGG
ATGGAAAGACGAGGCTAGCAGCAGCAGCAGCAACAGCAGCAACGGTAGCA
GCAGCAGCAGCAGCAGCAGCGACAGTGACAGGAGAAGGGGCACAGAGCAC
CGTAGAAGCCTCAGACACGAATGAGGTGCCGCTGTGGAAGGGTGAAGCCA
AGGAGGATGAGGGAGAGGAAGGGGGGGAGGATGAGGAGGAGGAGGAGGAG
AGGGTGGAGGTCAGTAACGATGTGGTGACGTTTTATGCGAGGCAGCAGAA
GGTGGGGATTCAGAGGCCGACGCACCAACAGCCTGCAAGGATGGGAAAAG
GGGGGAGAAGAGGAGTAGGAGAGGAAGTGGGAGGAGGAAGAGGAGACGGG
AGAGGGGGAGGGGGAGGAGGGAAGGATGAATTTGAATTTGATGAGGAGGA
TGACGACAATGGTGTATCGAGTATCAAACGTAGAGGAAAGAGGCGAACGC
TGGGCGTTGGGGGAGGGAGGGAGGGAGCAAAAGATGGTGGTGGCGTAGTG
GAAGGAGGGGGGGAGAGGGAGGGTTAG
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protein sequence of NO06G01660.1

>NO06G01660.1-protein ID=NO06G01660.1-protein|Name=NO06G01660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=459bp
MVKPGKSTGTDRDGGRGGGGGGGGGGGRGGGGGGGGGEGGGNGGRAGAGA
GAGVGSEAESLLSPQDERVNQQGLKWRCEACTFANSLLLKKCEICETERR
MARRLLQLVDTNGNAVENSGKFFSPTPPPNKRRGGSGAAAAAAAAMKGTR
KIAVAKSLPEFNLVKEVEDDDEKEKEEEEEEGIEERGDCDVSDNDDALGW
RKGAGGKSRKSAARGDITYDGANQGKGKENADKDTNVEPSVAAATGSSSS
SSTLRKRKRVRRQSMESSDESSGSEELMVVEEKDGKTRLAAAAATAATVA
AAAAAAATVTGEGAQSTVEASDTNEVPLWKGEAKEDEGEEGGEDEEEEEE
RVEVSNDVVTFYARQQKVGIQRPTHQQPARMGKGGRRGVGEEVGGGRGDG
RGGGGGGKDEFEFDEEDDDNGVSSIKRRGKRRTLGVGGGREGAKDGGGVV
EGGGEREG*
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Synonyms
Publications