NO06G01540, NO06G01540 (gene) Nannochloropsis oceanica

Overview
NameNO06G01540
Unique NameNO06G01540
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1218
Alignment locationchr6:485580..486797 +

Link to JBrowse

Properties
Property NameValue
DescriptionXAP5 protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:485580..486797 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR007005XAP5
Homology
BLAST of NO06G01540 vs. NCBI_GenBank
Match: EWM26195.1 (XAP5 protein [Nannochloropsis gaditana])

HSP 1 Score: 425.2 bits (1092), Expect = 2.000e-115
Identity = 282/382 (73.82%), Postives = 308/382 (80.63%), Query Frame = 0
Query:    1 MSHSDFGRGGTGIHTVEGNQAGARAAKLTQKREQDQREFEAKKRKIQDDSQRAMDGIDQKFSSIQQTAFNLDFVGLKTKEELLNLKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT-------------------LKNPEAETSFLRDPMAEKEQALLRENLKLEWLAEQERVKEEMLEVTYSYWDGSGHRRVLKCKKGTTIAKFVEMVKSQVAAEFTDLRGVTSDELMYIKEDLIIPHNYSFYDLILTKARGKSGPLFHFDVHDDVRLTMDARVEKDESHPGKVVERRWYERNKHIFPASRWEIYDPKVQRGGYTVHGGEVQEKK 364
            MSH+ F RG TGIHTVEGN AG RAAKLTQKRE+DQ+E+EAKKRKIQDDSQRA+ GIDQKF SIQQ AF LDFVGLKTKEELLNLKG     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                            L NP AETS+LRDP AEKE+A+LRE LK EWL EQ+R+KEE+LEVTYSYWDGSGHRRVL+CKKG +I  F++ VK+QVA EF DLRG++ D++MYIKEDLIIPHN SFYDLI+TKARGKSGPLFHFDVHDDVRLTMDARVEKDESHPGKVV+R+WYERNKHIFPASRWE+YDPKV RGGY++HGGEVQ KK
Sbjct:   11 MSHAGFARGDTGIHTVEGNLAGGRAAKLTQKREKDQKEYEAKKRKIQDDSQRAVGGIDQKFKSIQQNAFTLDFVGLKTKEELLNLKGAAEQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTSAKGNKAANASNDKEMSIPGTSAGESALGRGEETLTVKKRKKLVNPGAETSYLRDPEAEKEEAILRERLKQEWLEEQDRIKEEVLEVTYSYWDGSGHRRVLRCKKGVSIGAFLQQVKAQVAVEFPDLRGISPDDMMYIKEDLIIPHNVSFYDLIVTKARGKSGPLFHFDVHDDVRLTMDARVEKDESHPGKVVDRKWYERNKHIFPASRWEVYDPKVVRGGYSIHGGEVQAKK 392          
BLAST of NO06G01540 vs. NCBI_GenBank
Match: CBN77530.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 296.6 bits (758), Expect = 1.100e-76
Identity = 219/363 (60.33%), Postives = 262/363 (72.18%), Query Frame = 0
Query:    4 SDFGRGGTGIHTVEGNQAGARAAKLTQKREQDQREFEAKKRKIQDDSQRAMDGIDQKF----SSIQQTAFNLDFVGLKTKEELLNLKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLKNPEAETSFLRDPMAEKEQALLRENLKLEWLAEQERVKEEMLEVTYSYWDGSGHRRVLKCKKGTTIAKFVEMVKSQVAAEFTDLRGVTSDELMYIKEDLIIPHNYSFYDLILTKARGKSGPLFHFDVHDDVRLTMDARVEKDESHPGKVVERRWYERNKHIFPASRWEIYDPKVQRGGYTVHGGEVQEK 363
            +DF RG TGI+T EG  +G RAA+L ++R +DQ+++E+K++KIQD+  R    ID KF    +   +  F    VGL T +E    +                       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         KNP  +TSFL D   EK     RE LK EW+ EQE++K E LEVTYSYWDGSGHRR +   KG T+ KF+EMV+ Q++ +F+++R V+S+ L+YIKEDLIIPH++SFYDLI+TKARGKSGPLFHFDVHDD+RL  D R+EKDESHPGK+VERRWYERNKHIFPASRWE YDP+   G YT+HGGEV EK
Sbjct:    3 TDFKRGDTGINTAEGQISGPRAARLAKQRLEDQKDYESKRQKIQDEYHRGALKIDDKFGGSATDQYEAMFKATTVGLVTADEFKKAR------------VLAETGVGDKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEPPLKLGKKNPNVDTSFLPDREREKGMRDQREKLKKEWIEEQEKLKMERLEVTYSYWDGSGHRREIVLNKGITVGKFLEMVRQQLSQDFSEMRSVSSENLLYIKEDLIIPHHFSFYDLIVTKARGKSGPLFHFDVHDDIRLVHDTRIEKDESHPGKIVERRWYERNKHIFPASRWETYDPQKDYGTYTIHGGEVNEK 353          
BLAST of NO06G01540 vs. NCBI_GenBank
Match: XP_002291177.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91284.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 282.0 bits (720), Expect = 2.700e-72
Identity = 184/375 (49.07%), Postives = 227/375 (60.53%), Query Frame = 0
Query:    4 SDFGRGGTGIHTVEGNQAGARAAKLTQKREQDQREFEAKKRKIQDDSQRAMDGIDQKFS-----SIQQTAFNLDFVGLKTKEEL---------LNLKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLKNPEAETSFLRDPMAEKEQALLRENLKLEWLAEQERVKEEMLEVTYSYWDGSGHRRVLKCKKGTTIAKFVEMVKSQVAAEFTDLRGVTSDELMYIKEDLIIPHNYSFYDLILTKARGKSGPLFHFDVHDDVRL-TMDARVEKDESHPGKVVERRWYERNKHIFPASRWEIYDPKVQRGGYTVHGGEVQEKK 364
            ++F R  TGI+TVEGN AG+RAA L++KR  +Q  FEA+K+KI+ DS+R   GID KF      S ++  F    VGL +  E             K                          XXXXXXXXXXXXXXXXXXX                                         +KNP  +TSFL D   E+     R  L+ EWL  Q+ +KEE+LE+TYSYWDG+GHRR + CKKG T+A+F+E+V+  +A EF ++  V+SD L+Y+KEDLIIP + SFYDLI T+ARGKSGPLF+FDVHDDVRL  +DARVEKDESHPGKVVERRWY+RNKHIFPASRWE YDP  + G YT+HGGEV +KK
Sbjct:    6 ANFQRPDTGINTVEGNVAGSRAATLSKKRAAEQASFEARKQKIKADSERGKLGIDAKFDTNTNVSKEEQKFREQTVGLVSAAEFKRANAEIEKARSKRGEDEFDDGVEGVDGGTSITEEELKRXXXXXXXXXXXXXXXXXXXMAALSFAGDEELEDDETNGADEPSDGKESNDKQSTKEDKGIMKNPSVDTSFLPDQGREQRAKEERNRLRREWLDRQKTMKEEVLEITYSYWDGTGHRRTVHCKKGDTVAQFLELVRKDLAKEFREMCNVSSDALLYVKEDLIIPQDISFYDLIATRARGKSGPLFNFDVHDDVRLGALDARVEKDESHPGKVVERRWYDRNKHIFPASRWEPYDPAKEYGTYTIHGGEVTKKK 380          
BLAST of NO06G01540 vs. NCBI_GenBank
Match: KUF85090.1 (FAM50 protein [Phytophthora nicotianae])

HSP 1 Score: 273.5 bits (698), Expect = 9.700e-70
Identity = 182/351 (51.85%), Postives = 216/351 (61.54%), Query Frame = 0
Query:    9 GGTGIHTVEGNQAGARAAKLTQKREQDQREFEAKKRKIQDDSQRAMDGIDQKFSSIQ---QTAFNLDFVGLKTKEELLNLKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLKNPEAETSFLRDPMAEKEQALLRENLKLEWLAEQERVKEEMLEVTYSYWDGSGHRRVLKCKKGTTIAKFVEMVKSQVAAEFTDLRGVTSDELMYIKEDLIIPHNYSFYDLILTKARGKSGPLFHFDVHDDVRLTMDARVEKDESHPGKVVERRWYERNKHIFPASRWEIYDPKVQRGGYTVHG 357
            G +G HTVEGN AG+RAAKLT++RE+ Q+E+EAK++ I+  ++R    ID  F S Q   ++ F    VGL T EE    +                                   XXXXXXXXXXXXXXXXXXXXXXXXX                         ++KNP  ET FL D                EW   QER+K E + VTYSYWDGSGHRR +   K TTI K++E VK Q+  EF +LRGV+++ L+YIKEDLIIPH+YSFYDLI+TKARGKSGPLFHFDVHDDVRL  D RVEKDESHPGKVV+R WYE+NKHIFPASRWE+YDP V R  YT+HG
Sbjct:    8 GSSGAHTVEGNVAGSRAAKLTKQREKQQKEYEAKRQDIEKTNRRG-TRIDANFQSHQDDDESEFKRQTVGLVTAEEFRKKR---------------------------EDLQNRKSXXXXXXXXXXXXXXXXXXXXXXXXXGPLSFDMDDNEGDEEETVQPKRVKKSIKNPNVETDFLPDKXXXXXXXXXXXXXXXEWEEXQERIKNEDVAVTYSYWDGSGHRREITVPKKTTIGKYLEFVKQQLVTEFAELRGVSAENLIYIKEDLIIPHHYSFYDLIVTKARGKSGPLFHFDVHDDVRLVQDRRVEKDESHPGKVVDRHWYEKNKHIFPASRWEVYDPNVVREKYTIHG 330          
BLAST of NO06G01540 vs. NCBI_GenBank
Match: CCA14907.1 (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 273.1 bits (697), Expect = 1.300e-69
Identity = 154/356 (43.26%), Postives = 205/356 (57.58%), Query Frame = 0
Query:    4 SDFGR-GGTGIHTVEGNQAGARAAKLTQKREQDQREFEAKKRKIQDDSQRAMDGIDQKFSS---IQQTAFNLDFVGLKTKEELLNLKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLKNPEAETSFLRDPMAEKEQALLRENLKLEWLAEQERVKEEMLEVTYSYWDGSGHRRVLKCKKGTTIAKFVEMVKSQVAAEFTDLRGVTSDELMYIKEDLIIPHNYSFYDLILTKARGKSGPLFHFDVHDDVRLTMDARVEKDESHPGKVVERRWYERNKHIFPASRWEIYDPKVQRGGYTVH 356
            SD  R G  G+HTVEGN AG+RAA+LT++RE+ ++++E+KK++I D + RA   I++ F +   ++   F    VGL T EE    +                                                                                       KNP  ETSFL D   E ++ L R+ L+ EW  +Q R+K E + VTYSYW+GSGHRR +   K TTIAK++E+VK ++  EF++LRG++ + L+Y+KEDLIIPH++SFYDLI+TKARGKSGPLFHFDVH+DVRL  DAR+EKDESHPGKVVER WYE+NKHIFPASRWE+YDP ++R  YT+H
Sbjct:    3 SDIQRYGDAGVHTVEGNLAGSRAARLTKQREEQRKDYESKKQEITDTNFRA-SRIEKSFETHHDLEDAEFKRQTVGLVTAEEFRRKR---------------------EILQSRRSDVLASVGQSSTKPVEKKNARKRKPKASTLLSFSLEEDTDADVLPTDALGEGRKKRMMRKNPFVETSFLPDKERELQEELERKKLQEEWEEDQNRIKNENVTVTYSYWNGSGHRREITIPKKTTIAKYLELVKQELVQEFSELRGISPENLLYVKEDLIIPHHFSFYDLIVTKARGKSGPLFHFDVHEDVRLINDARIEKDESHPGKVVERHWYEKNKHIFPASRWEMYDPMIKREKYTIH 336          
BLAST of NO06G01540 vs. NCBI_GenBank
Match: ETP47676.1 (hypothetical protein F442_06415 [Phytophthora parasitica P10297])

HSP 1 Score: 263.5 bits (672), Expect = 1.000e-66
Identity = 178/351 (50.71%), Postives = 213/351 (60.68%), Query Frame = 0
Query:    9 GGTGIHTVEGNQAGARAAKLTQKREQDQREFEAKKRKIQDDSQRAMDGIDQKFSSIQ---QTAFNLDFVGLKTKEELLNLKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLKNPEAETSFLRDPMAEKEQALLRENLKLEWLAEQERVKEEMLEVTYSYWDGSGHRRVLKCKKGTTIAKFVEMVKSQVAAEFTDLRGVTSDELMYIKEDLIIPHNYSFYDLILTKARGKSGPLFHFDVHDDVRLTMDARVEKDESHPGKVVERRWYERNKHIFPASRWEIYDPKVQRGGYTVHG 357
            G +G HTVEGN AG+RAAKLT++RE+ Q+E+EAK++ I+  ++R    ID  F S Q   ++ F    VGL T EE    +                                   XXXXXXXXXXXXXXXXXXXXXXXXX                         ++KNP  ET FL D                       R+K E + VTYSYWDGSGHRR +   K TTI K++E+VK Q+  EF +LRGV+++ L+YIKEDLIIPH+YSFYDLI+TKARGKSGPLFHFDVHDDVRL  D RVEKDESHPGKVV+R WYE+NKHIFPASRWE+YDP V R  YT+HG
Sbjct:    8 GSSGAHTVEGNVAGSRAAKLTKQREKQQKEYEAKRQDIEKTNRRG-TRIDANFQSHQDDDESEFKRQTVGLVTAEEFRKKR---------------------------EDLQNRKSXXXXXXXXXXXXXXXXXXXXXXXXXGPLSFDMDDNEGDEEETVQPKRVKKSIKNPNVETDFLPDKXXXXXXXXXXXXXXXXXXXXXXRIKNEDVAVTYSYWDGSGHRREITVPKKTTIGKYLELVKQQLVTEFAELRGVSAENLIYIKEDLIIPHHYSFYDLIVTKARGKSGPLFHFDVHDDVRLVQDRRVEKDESHPGKVVDRHWYEKNKHIFPASRWEVYDPNVVREKYTIHG 330          
BLAST of NO06G01540 vs. NCBI_GenBank
Match: OQR98386.1 (hypothetical protein THRCLA_06732 [Thraustotheca clavata])

HSP 1 Score: 256.1 bits (653), Expect = 1.600e-64
Identity = 160/352 (45.45%), Postives = 197/352 (55.97%), Query Frame = 0
Query:    5 DFGRGGT-GIHTVEGNQAGARAAKLTQKREQDQREFEAKKRKIQDDSQRAMDGIDQKFSSIQQTAFNLDF----VGLKTKEELLNLKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLKNPEAETSFLRDPMAEKEQALLRE--NLKLEWLAEQERVKEEMLEVTYSYWDGSGHRRVLKCKKGTTIAKFVEMVKSQVAAEFTDLRGVTSDELMYIKEDLIIPHNYSFYDLILTKARGKSGPLFHFDVHDDVRLTMDARVEKDESHPGKVVERRWYERNKHIFPASRWEIYDPKVQR 350
            D  R GT G+HTVEG  +G+RAA+L ++REQ +REF  KK+ I+++  R    ID+ F S +  A   +F    VGL T  E    +                                                                 XXX                  LK P  +T FL  P  E+E AL  E   L++EW  EQER+K+EML V+YSYWDG+GHRR    +K TTI KF+E V+ ++A EF D+R V++D LMYIKEDLIIPH+ SFYDLI+TKARGKSGPLFHFDVH+DVRL  D RVEKDESHPGKV  R+WYE+N+HIFPASRWEIYDP VQR
Sbjct:    2 DLRRYGTAGVHTVEGTVSGSRAAQLARQREQQEREFVEKKKSIEEEHARG-SRIDKNFESHRDAASEAEFKRQTVGLVTAAEFRKRR-------------------------------------------EDCMTITQEKQDSKKAVKTIKKXXXRNMLSFSMDSDEDVPVKKLKCPFVKTDFL--PDKEREAALEDEKRKLEMEWKEEQERIKKEMLTVSYSYWDGAGHRREYTVEKATTIGKFLEQVRRELATEFPDVRSVSTDNLMYIKEDLIIPHHLSFYDLIVTKARGKSGPLFHFDVHNDVRLVNDVRVEKDESHPGKVTHRQWYEKNRHIFPASRWEIYDPAVQR 307          
BLAST of NO06G01540 vs. NCBI_GenBank
Match: XP_020434560.1 (XAP5 protein [Heterostelium album PN500] >EFA82443.1 XAP5 protein [Heterostelium album PN500])

HSP 1 Score: 254.6 bits (649), Expect = 4.700e-64
Identity = 117/181 (64.64%), Postives = 144/181 (79.56%), Query Frame = 0
Query:  174 KNPEAETSFLRDPMAEKEQALLRENLKLEWLAEQERVKEEMLEVTYSYWDGSGHRRVLKCKKGTTIAKFVEMVKSQVAAEFTDLRGVTSDELMYIKEDLIIPHNYSFYDLILTKARGKSGPLFHFDVHDDVRLTMDARVEKDESHPGKVVERRWYERNKHIFPASRWEIYDPKVQRGGYTV 355
            K+P   T FL D   E+++ + RE L  +W+ +Q+++K E++E+TYSYWDGSGHRRVL+C KGTTI KF+EM +     EF +LRGV+ D L++IKEDLIIPHNYSFYDLI+ KARGKSGPLF FDVHDDVRL  DA VEKDE+H GKVVE+ WYE+NKHIFPASRWE+YDP V R  YT+
Sbjct:  168 KDPTVNTEFLPDKEREEQERMEREKLAKQWIEDQDKIKAEVVEITYSYWDGSGHRRVLQCTKGTTIDKFLEMARQ----EFKELRGVSVDHLLFIKEDLIIPHNYSFYDLIIEKARGKSGPLFKFDVHDDVRLVSDATVEKDETHAGKVVEKSWYEKNKHIFPASRWEVYDPTVARDKYTI 344          
BLAST of NO06G01540 vs. NCBI_GenBank
Match: PNR36178.1 (hypothetical protein PHYPA_022029 [Physcomitrella patens])

HSP 1 Score: 253.8 bits (647), Expect = 7.900e-64
Identity = 115/183 (62.84%), Postives = 144/183 (78.69%), Query Frame = 0
Query:  174 KNPEAETSFLRDPMAEKEQALLRENLKLEWLAEQERVKEEMLEVTYSYWDGSGHRRVLKCKKGTTIAKFVEMVKSQVAAEFTDLRGVTSDELMYIKEDLIIPHNYSFYDLILTKARGKSGPLFHFDVHDDVRLTMDARVEKDESHPGKVVERRWYERNKHIFPASRWEIYDPKVQRGGYTVHG 357
            K+P  ETSFL D   E E+   RE L+ +WL EQ R+K E LE+TYSYWDG+GHRRV++ +KG TIA+F+  V+ Q+A+EF ++R  + + L+Y+KEDLIIPH +SFYDLI+ KARGKSGPLFHFDVH+D+R   DA +EKDESH GKVVER WYE+NKHIFPASRWEIYDP  +   YT+HG
Sbjct:   82 KDPNVETSFLPDREREAEEQAERERLRNQWLQEQARIKNEPLEITYSYWDGAGHRRVIQVRKGDTIAEFLRAVQQQLASEFREIRTASVENLLYVKEDLIIPHQHSFYDLIINKARGKSGPLFHFDVHEDIRTIADATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHG 264          
BLAST of NO06G01540 vs. NCBI_GenBank
Match: XP_024368230.1 (protein XAP5 CIRCADIAN TIMEKEEPER-like [Physcomitrella patens] >PNR59756.1 hypothetical protein PHYPA_002548 [Physcomitrella patens])

HSP 1 Score: 253.8 bits (647), Expect = 7.900e-64
Identity = 115/183 (62.84%), Postives = 144/183 (78.69%), Query Frame = 0
Query:  174 KNPEAETSFLRDPMAEKEQALLRENLKLEWLAEQERVKEEMLEVTYSYWDGSGHRRVLKCKKGTTIAKFVEMVKSQVAAEFTDLRGVTSDELMYIKEDLIIPHNYSFYDLILTKARGKSGPLFHFDVHDDVRLTMDARVEKDESHPGKVVERRWYERNKHIFPASRWEIYDPKVQRGGYTVHG 357
            KNP  ETSFL D   E E+   RE L+ +WL EQ RVK E LE+TYSYWDG+GHRRV++ +KG +IA+F+  V+ Q+A+EF ++R  + + L+Y+KEDLIIPH +SFY+LI+ KARGKSGPLFHFDVH+D+R   DA +EKDESH GKVVER WYE+NKHIFPASRWEIYDP  +   YT+HG
Sbjct:  154 KNPGVETSFLPDREREAEEQAERERLRTQWLQEQSRVKNEALEITYSYWDGAGHRRVIQVRKGDSIAEFLRAVQQQLASEFREIRTASVENLLYVKEDLIIPHQHSFYELIINKARGKSGPLFHFDVHEDIRTIADATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKRWERYTIHG 336          
The following BLAST results are available for this feature:
BLAST of NO06G01540 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26195.12.000e-11573.82XAP5 protein [Nannochloropsis gaditana][more]
CBN77530.11.100e-7660.33conserved unknown protein [Ectocarpus siliculosus][more]
XP_002291177.12.700e-7249.07predicted protein [Thalassiosira pseudonana CCMP13... [more]
KUF85090.19.700e-7051.85FAM50 protein [Phytophthora nicotianae][more]
CCA14907.11.300e-6943.26conserved hypothetical protein [Albugo laibachii N... [more]
ETP47676.11.000e-6650.71hypothetical protein F442_06415 [Phytophthora para... [more]
OQR98386.11.600e-6445.45hypothetical protein THRCLA_06732 [Thraustotheca c... [more]
XP_020434560.14.700e-6464.64XAP5 protein [Heterostelium album PN500] >EFA82443... [more]
PNR36178.17.900e-6462.84hypothetical protein PHYPA_022029 [Physcomitrella ... [more]
XP_024368230.17.900e-6462.84protein XAP5 CIRCADIAN TIMEKEEPER-like [Physcomitr... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000299NSK000299Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G01540.1NO06G01540.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100072g16gene4338Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G01540.1NO06G01540.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G01540 ID=NO06G01540|Name=NO06G01540|organism=Nannochloropsis oceanica|type=gene|length=1218bp
ATGTCGCATTCCGACTTCGGCCGGGGGGGCACCGGCATCCACACCGTTGA
GGGCAATCAAGCTGGGGCCCGCGCAGCCAAGTTGACGCAGAAGCGCGAGC
AGGATCAGCGGGAGTTTGAAGCCAAGAAGgttagttcattgccactcagg
ataatatatatgtgattaggttgcccccctcaaggcttgcccttccctct
ccctccgtcgcgcttaccctcctctacccctccctcctatttcgaacagC
GCAAAATCCAAGACGACTCTCAACGGGCCATGGATGGAATCGACCAGAAA
TTCAGCAGCATCCAACAGACCGCATTCAATTTGGATTTTGTGGGGTTGAA
AACAAAGGAGGAATTGCTCAATTTGAAGGGAGCCGCAGAAGAGGAGGCAG
CAAGGCAAAAGATGGTGGAGGAGGAGGAGGCCCGACGTCGAGAGAAGGAG
GAGAAGAAGAAGAGAAAGCAGAAACAGACAAAGGTAGCTCGACTGAGTTT
CGCCATGGGCGGGGATGACGAGGCGGAGGACGACGACGACGAAGAGAGGA
GCAGCCGACCTACCGAGGACGTGGACGCCGTCAATTCCTCGTCCTCTTCC
AGGAGCAGCTCTACTTTCTTTAAGAAGAGGAAAACTCTCAAAAATCCTGA
GGCAGAAACCAGCTTCTTACGCGACCCGATGGCGGAAAAAGAGCAGGCCT
TGCTCCGCGAGAACCTCAAGCTCGAATGGCTGGCGGAGCAAGAGCGGGTC
AAGGAAGAGATGTTGGAAGTTACATATTCTTACTGGGATGGCTCAGGACA
TCGACGGGTGTTAAAGTGTAAGAAGGGTACCACTATTGCCAAGTTTGTCG
AGATGGTCAAGAGTCAGGTGGCGGCGGAATTTACTGATTTGCGAGGCGTT
ACATCAGATGAGTTAATGTATATCAAGGAAGACCTCATTATCCCGCACAA
CTACTCTTTTTATGATTTGATTTTGACGAAGGCACGGGGGAAGTCTGGGC
CATTGTTTCATTTTGATGTCCACGACGATGTGAGGCTGACAATGGATGCG
AGGGTGGAGAAGGATGAGAGTCATCCAGGCAAAGTAGTGGAAAGGAGGTG
GTATGAGAGGAATAAACACATTTTCCCCGCAAGTCGTTGGGAGATTTATG
ACCCGAAAGTGCAAAGGGGGGGTTATACTGTGCATGGGGGGGAGGTGCAG
GAGAAGAAGAAGAGGTGA
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protein sequence of NO06G01540.1

>NO06G01540.1-protein ID=NO06G01540.1-protein|Name=NO06G01540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=366bp
MSHSDFGRGGTGIHTVEGNQAGARAAKLTQKREQDQREFEAKKRKIQDDS
QRAMDGIDQKFSSIQQTAFNLDFVGLKTKEELLNLKGAAEEEAARQKMVE
EEEARRREKEEKKKRKQKQTKVARLSFAMGGDDEAEDDDDEERSSRPTED
VDAVNSSSSSRSSSTFFKKRKTLKNPEAETSFLRDPMAEKEQALLRENLK
LEWLAEQERVKEEMLEVTYSYWDGSGHRRVLKCKKGTTIAKFVEMVKSQV
AAEFTDLRGVTSDELMYIKEDLIIPHNYSFYDLILTKARGKSGPLFHFDV
HDDVRLTMDARVEKDESHPGKVVERRWYERNKHIFPASRWEIYDPKVQRG
GYTVHGGEVQEKKKR*
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Synonyms
Publications