NO06G01540, NO06G01540 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G01540 vs. NCBI_GenBank
Match: EWM26195.1 (XAP5 protein [Nannochloropsis gaditana]) HSP 1 Score: 425.2 bits (1092), Expect = 2.000e-115 Identity = 282/382 (73.82%), Postives = 308/382 (80.63%), Query Frame = 0 Query: 1 MSHSDFGRGGTGIHTVEGNQAGARAAKLTQKREQDQREFEAKKRKIQDDSQRAMDGIDQKFSSIQQTAFNLDFVGLKTKEELLNLKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT-------------------LKNPEAETSFLRDPMAEKEQALLRENLKLEWLAEQERVKEEMLEVTYSYWDGSGHRRVLKCKKGTTIAKFVEMVKSQVAAEFTDLRGVTSDELMYIKEDLIIPHNYSFYDLILTKARGKSGPLFHFDVHDDVRLTMDARVEKDESHPGKVVERRWYERNKHIFPASRWEIYDPKVQRGGYTVHGGEVQEKK 364 MSH+ F RG TGIHTVEGN AG RAAKLTQKRE+DQ+E+EAKKRKIQDDSQRA+ GIDQKF SIQQ AF LDFVGLKTKEELLNLKG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L NP AETS+LRDP AEKE+A+LRE LK EWL EQ+R+KEE+LEVTYSYWDGSGHRRVL+CKKG +I F++ VK+QVA EF DLRG++ D++MYIKEDLIIPHN SFYDLI+TKARGKSGPLFHFDVHDDVRLTMDARVEKDESHPGKVV+R+WYERNKHIFPASRWE+YDPKV RGGY++HGGEVQ KK Sbjct: 11 MSHAGFARGDTGIHTVEGNLAGGRAAKLTQKREKDQKEYEAKKRKIQDDSQRAVGGIDQKFKSIQQNAFTLDFVGLKTKEELLNLKGAAEQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTSAKGNKAANASNDKEMSIPGTSAGESALGRGEETLTVKKRKKLVNPGAETSYLRDPEAEKEEAILRERLKQEWLEEQDRIKEEVLEVTYSYWDGSGHRRVLRCKKGVSIGAFLQQVKAQVAVEFPDLRGISPDDMMYIKEDLIIPHNVSFYDLIVTKARGKSGPLFHFDVHDDVRLTMDARVEKDESHPGKVVDRKWYERNKHIFPASRWEVYDPKVVRGGYSIHGGEVQAKK 392
BLAST of NO06G01540 vs. NCBI_GenBank
Match: CBN77530.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 296.6 bits (758), Expect = 1.100e-76 Identity = 219/363 (60.33%), Postives = 262/363 (72.18%), Query Frame = 0 Query: 4 SDFGRGGTGIHTVEGNQAGARAAKLTQKREQDQREFEAKKRKIQDDSQRAMDGIDQKF----SSIQQTAFNLDFVGLKTKEELLNLKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLKNPEAETSFLRDPMAEKEQALLRENLKLEWLAEQERVKEEMLEVTYSYWDGSGHRRVLKCKKGTTIAKFVEMVKSQVAAEFTDLRGVTSDELMYIKEDLIIPHNYSFYDLILTKARGKSGPLFHFDVHDDVRLTMDARVEKDESHPGKVVERRWYERNKHIFPASRWEIYDPKVQRGGYTVHGGEVQEK 363 +DF RG TGI+T EG +G RAA+L ++R +DQ+++E+K++KIQD+ R ID KF + + F VGL T +E + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KNP +TSFL D EK RE LK EW+ EQE++K E LEVTYSYWDGSGHRR + KG T+ KF+EMV+ Q++ +F+++R V+S+ L+YIKEDLIIPH++SFYDLI+TKARGKSGPLFHFDVHDD+RL D R+EKDESHPGK+VERRWYERNKHIFPASRWE YDP+ G YT+HGGEV EK Sbjct: 3 TDFKRGDTGINTAEGQISGPRAARLAKQRLEDQKDYESKRQKIQDEYHRGALKIDDKFGGSATDQYEAMFKATTVGLVTADEFKKAR------------VLAETGVGDKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEPPLKLGKKNPNVDTSFLPDREREKGMRDQREKLKKEWIEEQEKLKMERLEVTYSYWDGSGHRREIVLNKGITVGKFLEMVRQQLSQDFSEMRSVSSENLLYIKEDLIIPHHFSFYDLIVTKARGKSGPLFHFDVHDDIRLVHDTRIEKDESHPGKIVERRWYERNKHIFPASRWETYDPQKDYGTYTIHGGEVNEK 353
BLAST of NO06G01540 vs. NCBI_GenBank
Match: XP_002291177.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91284.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 282.0 bits (720), Expect = 2.700e-72 Identity = 184/375 (49.07%), Postives = 227/375 (60.53%), Query Frame = 0 Query: 4 SDFGRGGTGIHTVEGNQAGARAAKLTQKREQDQREFEAKKRKIQDDSQRAMDGIDQKFS-----SIQQTAFNLDFVGLKTKEEL---------LNLKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLKNPEAETSFLRDPMAEKEQALLRENLKLEWLAEQERVKEEMLEVTYSYWDGSGHRRVLKCKKGTTIAKFVEMVKSQVAAEFTDLRGVTSDELMYIKEDLIIPHNYSFYDLILTKARGKSGPLFHFDVHDDVRL-TMDARVEKDESHPGKVVERRWYERNKHIFPASRWEIYDPKVQRGGYTVHGGEVQEKK 364 ++F R TGI+TVEGN AG+RAA L++KR +Q FEA+K+KI+ DS+R GID KF S ++ F VGL + E K XXXXXXXXXXXXXXXXXXX +KNP +TSFL D E+ R L+ EWL Q+ +KEE+LE+TYSYWDG+GHRR + CKKG T+A+F+E+V+ +A EF ++ V+SD L+Y+KEDLIIP + SFYDLI T+ARGKSGPLF+FDVHDDVRL +DARVEKDESHPGKVVERRWY+RNKHIFPASRWE YDP + G YT+HGGEV +KK Sbjct: 6 ANFQRPDTGINTVEGNVAGSRAATLSKKRAAEQASFEARKQKIKADSERGKLGIDAKFDTNTNVSKEEQKFREQTVGLVSAAEFKRANAEIEKARSKRGEDEFDDGVEGVDGGTSITEEELKRXXXXXXXXXXXXXXXXXXXMAALSFAGDEELEDDETNGADEPSDGKESNDKQSTKEDKGIMKNPSVDTSFLPDQGREQRAKEERNRLRREWLDRQKTMKEEVLEITYSYWDGTGHRRTVHCKKGDTVAQFLELVRKDLAKEFREMCNVSSDALLYVKEDLIIPQDISFYDLIATRARGKSGPLFNFDVHDDVRLGALDARVEKDESHPGKVVERRWYDRNKHIFPASRWEPYDPAKEYGTYTIHGGEVTKKK 380
BLAST of NO06G01540 vs. NCBI_GenBank
Match: KUF85090.1 (FAM50 protein [Phytophthora nicotianae]) HSP 1 Score: 273.5 bits (698), Expect = 9.700e-70 Identity = 182/351 (51.85%), Postives = 216/351 (61.54%), Query Frame = 0 Query: 9 GGTGIHTVEGNQAGARAAKLTQKREQDQREFEAKKRKIQDDSQRAMDGIDQKFSSIQ---QTAFNLDFVGLKTKEELLNLKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLKNPEAETSFLRDPMAEKEQALLRENLKLEWLAEQERVKEEMLEVTYSYWDGSGHRRVLKCKKGTTIAKFVEMVKSQVAAEFTDLRGVTSDELMYIKEDLIIPHNYSFYDLILTKARGKSGPLFHFDVHDDVRLTMDARVEKDESHPGKVVERRWYERNKHIFPASRWEIYDPKVQRGGYTVHG 357 G +G HTVEGN AG+RAAKLT++RE+ Q+E+EAK++ I+ ++R ID F S Q ++ F VGL T EE + XXXXXXXXXXXXXXXXXXXXXXXXX ++KNP ET FL D EW QER+K E + VTYSYWDGSGHRR + K TTI K++E VK Q+ EF +LRGV+++ L+YIKEDLIIPH+YSFYDLI+TKARGKSGPLFHFDVHDDVRL D RVEKDESHPGKVV+R WYE+NKHIFPASRWE+YDP V R YT+HG Sbjct: 8 GSSGAHTVEGNVAGSRAAKLTKQREKQQKEYEAKRQDIEKTNRRG-TRIDANFQSHQDDDESEFKRQTVGLVTAEEFRKKR---------------------------EDLQNRKSXXXXXXXXXXXXXXXXXXXXXXXXXGPLSFDMDDNEGDEEETVQPKRVKKSIKNPNVETDFLPDKXXXXXXXXXXXXXXXEWEEXQERIKNEDVAVTYSYWDGSGHRREITVPKKTTIGKYLEFVKQQLVTEFAELRGVSAENLIYIKEDLIIPHHYSFYDLIVTKARGKSGPLFHFDVHDDVRLVQDRRVEKDESHPGKVVDRHWYEKNKHIFPASRWEVYDPNVVREKYTIHG 330
BLAST of NO06G01540 vs. NCBI_GenBank
Match: CCA14907.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 273.1 bits (697), Expect = 1.300e-69 Identity = 154/356 (43.26%), Postives = 205/356 (57.58%), Query Frame = 0 Query: 4 SDFGR-GGTGIHTVEGNQAGARAAKLTQKREQDQREFEAKKRKIQDDSQRAMDGIDQKFSS---IQQTAFNLDFVGLKTKEELLNLKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLKNPEAETSFLRDPMAEKEQALLRENLKLEWLAEQERVKEEMLEVTYSYWDGSGHRRVLKCKKGTTIAKFVEMVKSQVAAEFTDLRGVTSDELMYIKEDLIIPHNYSFYDLILTKARGKSGPLFHFDVHDDVRLTMDARVEKDESHPGKVVERRWYERNKHIFPASRWEIYDPKVQRGGYTVH 356 SD R G G+HTVEGN AG+RAA+LT++RE+ ++++E+KK++I D + RA I++ F + ++ F VGL T EE + KNP ETSFL D E ++ L R+ L+ EW +Q R+K E + VTYSYW+GSGHRR + K TTIAK++E+VK ++ EF++LRG++ + L+Y+KEDLIIPH++SFYDLI+TKARGKSGPLFHFDVH+DVRL DAR+EKDESHPGKVVER WYE+NKHIFPASRWE+YDP ++R YT+H Sbjct: 3 SDIQRYGDAGVHTVEGNLAGSRAARLTKQREEQRKDYESKKQEITDTNFRA-SRIEKSFETHHDLEDAEFKRQTVGLVTAEEFRRKR---------------------EILQSRRSDVLASVGQSSTKPVEKKNARKRKPKASTLLSFSLEEDTDADVLPTDALGEGRKKRMMRKNPFVETSFLPDKERELQEELERKKLQEEWEEDQNRIKNENVTVTYSYWNGSGHRREITIPKKTTIAKYLELVKQELVQEFSELRGISPENLLYVKEDLIIPHHFSFYDLIVTKARGKSGPLFHFDVHEDVRLINDARIEKDESHPGKVVERHWYEKNKHIFPASRWEMYDPMIKREKYTIH 336
BLAST of NO06G01540 vs. NCBI_GenBank
Match: ETP47676.1 (hypothetical protein F442_06415 [Phytophthora parasitica P10297]) HSP 1 Score: 263.5 bits (672), Expect = 1.000e-66 Identity = 178/351 (50.71%), Postives = 213/351 (60.68%), Query Frame = 0 Query: 9 GGTGIHTVEGNQAGARAAKLTQKREQDQREFEAKKRKIQDDSQRAMDGIDQKFSSIQ---QTAFNLDFVGLKTKEELLNLKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLKNPEAETSFLRDPMAEKEQALLRENLKLEWLAEQERVKEEMLEVTYSYWDGSGHRRVLKCKKGTTIAKFVEMVKSQVAAEFTDLRGVTSDELMYIKEDLIIPHNYSFYDLILTKARGKSGPLFHFDVHDDVRLTMDARVEKDESHPGKVVERRWYERNKHIFPASRWEIYDPKVQRGGYTVHG 357 G +G HTVEGN AG+RAAKLT++RE+ Q+E+EAK++ I+ ++R ID F S Q ++ F VGL T EE + XXXXXXXXXXXXXXXXXXXXXXXXX ++KNP ET FL D R+K E + VTYSYWDGSGHRR + K TTI K++E+VK Q+ EF +LRGV+++ L+YIKEDLIIPH+YSFYDLI+TKARGKSGPLFHFDVHDDVRL D RVEKDESHPGKVV+R WYE+NKHIFPASRWE+YDP V R YT+HG Sbjct: 8 GSSGAHTVEGNVAGSRAAKLTKQREKQQKEYEAKRQDIEKTNRRG-TRIDANFQSHQDDDESEFKRQTVGLVTAEEFRKKR---------------------------EDLQNRKSXXXXXXXXXXXXXXXXXXXXXXXXXGPLSFDMDDNEGDEEETVQPKRVKKSIKNPNVETDFLPDKXXXXXXXXXXXXXXXXXXXXXXRIKNEDVAVTYSYWDGSGHRREITVPKKTTIGKYLELVKQQLVTEFAELRGVSAENLIYIKEDLIIPHHYSFYDLIVTKARGKSGPLFHFDVHDDVRLVQDRRVEKDESHPGKVVDRHWYEKNKHIFPASRWEVYDPNVVREKYTIHG 330
BLAST of NO06G01540 vs. NCBI_GenBank
Match: OQR98386.1 (hypothetical protein THRCLA_06732 [Thraustotheca clavata]) HSP 1 Score: 256.1 bits (653), Expect = 1.600e-64 Identity = 160/352 (45.45%), Postives = 197/352 (55.97%), Query Frame = 0 Query: 5 DFGRGGT-GIHTVEGNQAGARAAKLTQKREQDQREFEAKKRKIQDDSQRAMDGIDQKFSSIQQTAFNLDF----VGLKTKEELLNLKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLKNPEAETSFLRDPMAEKEQALLRE--NLKLEWLAEQERVKEEMLEVTYSYWDGSGHRRVLKCKKGTTIAKFVEMVKSQVAAEFTDLRGVTSDELMYIKEDLIIPHNYSFYDLILTKARGKSGPLFHFDVHDDVRLTMDARVEKDESHPGKVVERRWYERNKHIFPASRWEIYDPKVQR 350 D R GT G+HTVEG +G+RAA+L ++REQ +REF KK+ I+++ R ID+ F S + A +F VGL T E + XXX LK P +T FL P E+E AL E L++EW EQER+K+EML V+YSYWDG+GHRR +K TTI KF+E V+ ++A EF D+R V++D LMYIKEDLIIPH+ SFYDLI+TKARGKSGPLFHFDVH+DVRL D RVEKDESHPGKV R+WYE+N+HIFPASRWEIYDP VQR Sbjct: 2 DLRRYGTAGVHTVEGTVSGSRAAQLARQREQQEREFVEKKKSIEEEHARG-SRIDKNFESHRDAASEAEFKRQTVGLVTAAEFRKRR-------------------------------------------EDCMTITQEKQDSKKAVKTIKKXXXRNMLSFSMDSDEDVPVKKLKCPFVKTDFL--PDKEREAALEDEKRKLEMEWKEEQERIKKEMLTVSYSYWDGAGHRREYTVEKATTIGKFLEQVRRELATEFPDVRSVSTDNLMYIKEDLIIPHHLSFYDLIVTKARGKSGPLFHFDVHNDVRLVNDVRVEKDESHPGKVTHRQWYEKNRHIFPASRWEIYDPAVQR 307
BLAST of NO06G01540 vs. NCBI_GenBank
Match: XP_020434560.1 (XAP5 protein [Heterostelium album PN500] >EFA82443.1 XAP5 protein [Heterostelium album PN500]) HSP 1 Score: 254.6 bits (649), Expect = 4.700e-64 Identity = 117/181 (64.64%), Postives = 144/181 (79.56%), Query Frame = 0 Query: 174 KNPEAETSFLRDPMAEKEQALLRENLKLEWLAEQERVKEEMLEVTYSYWDGSGHRRVLKCKKGTTIAKFVEMVKSQVAAEFTDLRGVTSDELMYIKEDLIIPHNYSFYDLILTKARGKSGPLFHFDVHDDVRLTMDARVEKDESHPGKVVERRWYERNKHIFPASRWEIYDPKVQRGGYTV 355 K+P T FL D E+++ + RE L +W+ +Q+++K E++E+TYSYWDGSGHRRVL+C KGTTI KF+EM + EF +LRGV+ D L++IKEDLIIPHNYSFYDLI+ KARGKSGPLF FDVHDDVRL DA VEKDE+H GKVVE+ WYE+NKHIFPASRWE+YDP V R YT+ Sbjct: 168 KDPTVNTEFLPDKEREEQERMEREKLAKQWIEDQDKIKAEVVEITYSYWDGSGHRRVLQCTKGTTIDKFLEMARQ----EFKELRGVSVDHLLFIKEDLIIPHNYSFYDLIIEKARGKSGPLFKFDVHDDVRLVSDATVEKDETHAGKVVEKSWYEKNKHIFPASRWEVYDPTVARDKYTI 344
BLAST of NO06G01540 vs. NCBI_GenBank
Match: PNR36178.1 (hypothetical protein PHYPA_022029 [Physcomitrella patens]) HSP 1 Score: 253.8 bits (647), Expect = 7.900e-64 Identity = 115/183 (62.84%), Postives = 144/183 (78.69%), Query Frame = 0 Query: 174 KNPEAETSFLRDPMAEKEQALLRENLKLEWLAEQERVKEEMLEVTYSYWDGSGHRRVLKCKKGTTIAKFVEMVKSQVAAEFTDLRGVTSDELMYIKEDLIIPHNYSFYDLILTKARGKSGPLFHFDVHDDVRLTMDARVEKDESHPGKVVERRWYERNKHIFPASRWEIYDPKVQRGGYTVHG 357 K+P ETSFL D E E+ RE L+ +WL EQ R+K E LE+TYSYWDG+GHRRV++ +KG TIA+F+ V+ Q+A+EF ++R + + L+Y+KEDLIIPH +SFYDLI+ KARGKSGPLFHFDVH+D+R DA +EKDESH GKVVER WYE+NKHIFPASRWEIYDP + YT+HG Sbjct: 82 KDPNVETSFLPDREREAEEQAERERLRNQWLQEQARIKNEPLEITYSYWDGAGHRRVIQVRKGDTIAEFLRAVQQQLASEFREIRTASVENLLYVKEDLIIPHQHSFYDLIINKARGKSGPLFHFDVHEDIRTIADATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHG 264
BLAST of NO06G01540 vs. NCBI_GenBank
Match: XP_024368230.1 (protein XAP5 CIRCADIAN TIMEKEEPER-like [Physcomitrella patens] >PNR59756.1 hypothetical protein PHYPA_002548 [Physcomitrella patens]) HSP 1 Score: 253.8 bits (647), Expect = 7.900e-64 Identity = 115/183 (62.84%), Postives = 144/183 (78.69%), Query Frame = 0 Query: 174 KNPEAETSFLRDPMAEKEQALLRENLKLEWLAEQERVKEEMLEVTYSYWDGSGHRRVLKCKKGTTIAKFVEMVKSQVAAEFTDLRGVTSDELMYIKEDLIIPHNYSFYDLILTKARGKSGPLFHFDVHDDVRLTMDARVEKDESHPGKVVERRWYERNKHIFPASRWEIYDPKVQRGGYTVHG 357 KNP ETSFL D E E+ RE L+ +WL EQ RVK E LE+TYSYWDG+GHRRV++ +KG +IA+F+ V+ Q+A+EF ++R + + L+Y+KEDLIIPH +SFY+LI+ KARGKSGPLFHFDVH+D+R DA +EKDESH GKVVER WYE+NKHIFPASRWEIYDP + YT+HG Sbjct: 154 KNPGVETSFLPDREREAEEQAERERLRTQWLQEQSRVKNEALEITYSYWDGAGHRRVIQVRKGDSIAEFLRAVQQQLASEFREIRTASVENLLYVKEDLIIPHQHSFYELIINKARGKSGPLFHFDVHEDIRTIADATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKRWERYTIHG 336 The following BLAST results are available for this feature:
BLAST of NO06G01540 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G01540 ID=NO06G01540|Name=NO06G01540|organism=Nannochloropsis oceanica|type=gene|length=1218bpback to top protein sequence of NO06G01540.1 >NO06G01540.1-protein ID=NO06G01540.1-protein|Name=NO06G01540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=366bpback to top Synonyms
Publications
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