NO06G01360, NO06G01360 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G01360 vs. NCBI_GenBank
Match: XP_002291062.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91169.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 148.7 bits (374), Expect = 6.500e-32 Identity = 106/312 (33.97%), Postives = 155/312 (49.68%), Query Frame = 0 Query: 174 YGFNRQYYDVFTHLTNEMVVLDVLRLPNP------ENTPEEGEGGREDVREEREEEDFDGDRYLGDM-VGRDEDPLYEEAMKITPFW-----LQKGIKGSEEGWDDVEKEELAMLKNRAFLWGETEEEAREGRRAVGLGLLDLLLAFCYDWRTTGGDPTVESAWTMTTLSPSLCYLETXXXXXXXXXXXXXXXXXXXXXXXXXVVTYPYLRIWALAESCVEDVSGMLREGGGRGRRVMLRCLLRMRRVFRRTETHYLLNRLFLDDYCVMLQSTVGQIVVQELGEAWREGGQKGVRGVRVGKEEVGLGLVELE 474 YG + Y VF E + ++L PNP E+ E E R ++R E E + FD DRYL D+ + + D +++ AMK+ P W +Q + + + E LA L + E +R+ L LLD+L+A+ YD RTT GD TVES+WT+ LSPSL +LE+ + YPYLR + LA + V+DV +L RGRR ++RCLL++ R+ ++E HYL N+L++D +Q + VQ+ G E G +GKE + LGLVELE Sbjct: 185 YGLFQHYSSVFRDYAREGLAHEMLECPNPDEMYENEDMSEALETNRREMRLEVENDKFDPDRYLADLNISEEGDMIFDSAMKMVPHWIAASTMQSSVDTTNTFFSSEESHFLATLPTQI---NNIPTLTSEQQRSAYLSLLDVLIAYAYDHRTTDGDATVESSWTVMILSPSLSWLES-------YNPPYDTVAEVVRWCIRRTLIYPYLRSYTLARTLVKDVCQILL----RGRRTVIRCLLQLHRILEKSEAHYLFNKLYIDPLIGWMQQ-CEEKEVQDFGREVHEMLSDGDGDGSLGKECLNLGLVELE 481
BLAST of NO06G01360 vs. NCBI_GenBank
Match: XP_009823756.1 (hypothetical protein H257_01979 [Aphanomyces astaci] >ETV86957.1 hypothetical protein H257_01979 [Aphanomyces astaci]) HSP 1 Score: 143.7 bits (361), Expect = 2.100e-30 Identity = 116/326 (35.58%), Postives = 151/326 (46.32%), Query Frame = 0 Query: 174 YGFNRQYYDVFTHLTNEMVVLDVLRLPNPE-NTPEEGEGGREDVREEREEEDFDGDRYLGDMVGRDEDPLYEEAMKITPFW----------------------LQKGIKGSEEGWDDVEKEELAMLKNRAFLWGETEEEAREGRRAVGLGLLDLLLAFCYDWRTTGGDPTVESAWTMTTLSPSLCYLETXXXXXXXXXXXXXXXXXXXXXXXXXVVTYPYLRIWALAESCVEDVSGMLREGGGRGRRVMLRCLLRMRRVFRRTETHYLLNRLFLDDYCVMLQSTVGQIVVQELGEAWREGGQKGVRGVRVGKEEVGLGLVELERLL 477 YGFN ++ D F E+ +VL LP PE +TP E R +R E E+ DFD +RYL D + ED ++ AM TPFW + S D EKE L L R +L E A V GLLD+L A+ YD RT+ GDPTVESAWT++ LS +L +L+ + YP+LR W L V DV MLR RG+RV+LR LL + +F +ET+YLLN LF++DY +QST L E Q K++ G GLVE+E L Sbjct: 170 YGFNNRFSDFFKCWHGEL--HEVLSLPTPETSTPAE----RTKMRLELEDHDFDVERYLLDFANQGEDDHFKAAMSYTPFWAALPVWTPPPPKVLIAHVTDSLANVTLHASSIELTDKEKEALLRLPRREYLAFTAAEAA-----VVWHGLLDILAAYSYDLRTSEGDPTVESAWTISILSSTLSWLD----------PATTTVADVVRNTMRRTLVYPFLRQWDLGVVVVNDVVAMLR----RGKRVVLRALLAIHSIFETSETYYLLNTLFINDYATWIQSTAD----AHLNE---YANQLDAALAAFHKQQSGWGLVEIEAAL 463
BLAST of NO06G01360 vs. NCBI_GenBank
Match: OQR95679.1 (SHQ1-like [Thraustotheca clavata]) HSP 1 Score: 143.7 bits (361), Expect = 2.100e-30 Identity = 98/274 (35.77%), Postives = 135/274 (49.27%), Query Frame = 0 Query: 174 YGFNRQYYDVFTHLTNEMVVLDVLRLPNPENTPEEGEGGREDVREEREEEDFDGDRYLGDMVGRDEDPLYEEAMKITPFWLQKGIKGSEE---------------GWDDVEKEELAMLKNRAFLWGETEEEAREGRRAVGLGLLDLLLAFCYDWRTTGGDPTVESAWTMTTLSPSLCYLETXXXXXXXXXXXXXXXXXXXXXXXXXVVTYPYLRIWALAESCVEDVSGMLREGGGRGRRVMLRCLLRMRRVFRRTETHYLLNRLFLDDYCVMLQ 433 YGFN ++ D F E V +++ LP P+ TP R +++ E++DFD +RYL D ED + EAM PFW I S ++D EKE L L NR L E+ G GL D+L A+ YD RTT GD TVESAWT+ S +L +L ++TYP LR +LA + DV +L+ RG+RV+LRCLLR+ + ++ETHYLLN L+++DYCV +Q Sbjct: 1120 YGFNNRFQDFFKCWHGE--VSEIIALPEPDKTP---ANDRMNLQTTTEDKDFDVERYLIDFANESEDEYFHEAMNYQPFWTSMPITKSTPTLVMAMDAMSLDPPFEFNDNEKEVLRRLPNREHLLSRGEQSILLG------GLCDILAAYAYDLRTTQGDATVESAWTIMITSSTLAWLN-----------PNADLNIVTKSNLRRMLTYPLLRQHSLACQALNDVCEILQ----RGKRVVLRCLLRLYDILSKSETHYLLNTLYIEDYCVWIQ 1367
BLAST of NO06G01360 vs. NCBI_GenBank
Match: CBN79567.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 142.1 bits (357), Expect = 6.100e-30 Identity = 108/353 (30.59%), Postives = 148/353 (41.93%), Query Frame = 0 Query: 174 YGFNRQYYDVFTHLTNEMVVLDVLRLPNPENTPEEGEGGREDVREEREEEDFDGDRYLGDMVGRDEDPLYEEAMKITPFW---------------------------------------------------------------LQKGIKG------------------SEEGWDDVEKEELAMLKNRAFLWGETEEEAREGRRAVGLGLLDLLLAFCYDWRTTGGDPTVESAWTMTTLSPSLCYLETXXXXXXXXXXXXXXXXXXXXXXXXXV-----VTYPYLRIWALAESCVEDVSGMLREGGGRGRRVMLRCLLRMRRVFRRTETHYLLNRLFLDDYCVMLQSTVGQIVV 441 YGFN ++ FT L E+ +++ LPNP+ TP E R +R E E+ FD DRYLGD+ +EDPL EA+ P W L +G +G EEG+ +VE+E++ L NR +L E + E RR + LGL D+L A+ YD RTT GD TVES WT+ LSP L +LE + +PYLR+W L DV +L G+R +LRCLL+ + R E HYLLN+LF++DYCV +Q + +V Sbjct: 617 YGFNDKFSGFFTSLREEL--REMIHLPNPDKTPAE---ARRGLRLEHEQAAFDPDRYLGDLFTEEEDPLLTEALAFEPHWRLRLGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREGAPEDGALLQGARGGVEGVVEAXXXXXXXXXEEEEGFTEVEQEQMRRLPNREYL---IEAGSAEERRVL-LGLADILFAYAYDHRTTTGDATVESPWTVAVLSPLLSWLEAPAEGGDVAESSPVAADASAETDVALAGIRRSLIFPYLRVWELGALVARDVRDIL----AAGKRCILRCLLQTYALMERGEVHYLLNKLFVEDYCVWIQKASEESLV 956
BLAST of NO06G01360 vs. NCBI_GenBank
Match: OQS01434.1 (hypothetical protein ACHHYP_00735 [Achlya hypogyna]) HSP 1 Score: 140.2 bits (352), Expect = 2.300e-29 Identity = 110/319 (34.48%), Postives = 152/319 (47.65%), Query Frame = 0 Query: 173 RYGFNRQYYDVFTHLTNEMVVLDVLRLPNPENTPEEGEGGREDVREEREEEDFDGDRYLGDMVGRDEDPLYEEAMKITPFW--LQKGIKGSE-------------EGWDDVEKEELAMLKNRAFLWGETEEEAREGRRAVGLGLLDLLLAFCYDWRTTGGDPTVESAWTMTTLSPSLCYLETXXXXXXXXXXXXXXXXXXXXXXXXXVVTYPYLRIWALAESCVEDVSGMLREGGGRGRRVMLRCLLRMRRVFRRTETHYLLNRLFLDDYCVMLQSTVGQIVVQELGEAWREGGQKGVRGVRVGKEEVGLGLVELERLL 477 RYGFN ++ D F E V ++L LP P+ TP R ++ E+ DFD +RYL D G +ED + EAM TPFW L + K + + E E L L R L E+ G GL DLL ++ YD RTT GD TVESAWT+ S +L +L V++YP LR ALA +EDV +L+ RG+RV+LRCLL + V +++ HYLLN LFL+DYCV +Q + + +L E + + V +R K+ G L +E +L Sbjct: 1516 RYGFNNRFSDFFKCWHGE--VAEILALPAPDTTPAH---DRTSLQHAAEDRDFDVERYLIDFAGMEEDEYFAEAMGYTPFWAALPETKKAPSLVVVMDSLSLDPPFVFTEPELELLRRLPAREHLLSRDEQAVLFG------GLCDLLASYAYDLRTTQGDSTVESAWTIMITSSTLAWLN-----------PTADLAAVAKSTLRRVLSYPLLRQHALALRVLEDVVAILK----RGKRVVLRCLLTVLDVLGKSDQHYLLNSLFLEDYCVWIQRQ-SDVALLDLAERF----EAHVAALRADKDSCGWALKHMEAML 1803
BLAST of NO06G01360 vs. NCBI_GenBank
Match: XP_008865429.1 (hypothetical protein H310_03377 [Aphanomyces invadans] >ETW05652.1 hypothetical protein H310_03377 [Aphanomyces invadans]) HSP 1 Score: 139.4 bits (350), Expect = 3.900e-29 Identity = 112/328 (34.15%), Postives = 160/328 (48.78%), Query Frame = 0 Query: 142 NKANSSGSDLAHSLLEPRPCLGGLNVGGNGIRYGFNRQYYDVFTHLTNEMVVLDVLRLPNPE-NTPEEGEGGREDVREEREEEDFDGDRYLGDMVGRDEDPLYEEAMKITPFW----------------------LQKGIKG----------SEEG---WDDVEKEELAMLKNRAFLWGETEEEAREGRRAVGLGLLDLLLAFCYDWRTTGGDPTVESAWTMTTLSPSLCYLETXXXXXXXXXXXXXXXXXXXXXXXXXVVTYPYLRIWALAESCVEDVSGMLREGGGRGRRVMLRCLLRMRRVFRRTETHYLLNRLFLDDYCVMLQS 434 ++AN++ S L S +P+ + L+VG YGFN ++ D F E+ +VL LP PE +TP E R +R E+ DFD +RYL D ED ++ A+ PFW + GI S E + + E E L L R +L + E A V GLLD+L A+CYD RT GDPTVESAWT++ LS +L +L+ ++TYP+LR WAL+ + ++DV +LR RG+RV+LR LL + VF +ET+YLLN L+++DY +QS Sbjct: 145 SRANANDSSLL-SFEKPKEAM-SLHVGPP--TYGFNNRFSDFFKCWHGEL--HEVLSLPTPEASTPAE----RTTMRRALEDNDFDVERYLLDFANESEDEYFQAAIAYEPFWANLPVYTPPPXPAPTRKVLIADVTDGIANVTIQSDNPTPSNEPSVVFTEKELEALRRLPRREYLPFTSAEAA-----IVWHGLLDILAAYCYDMRTNQGDPTVESAWTISILSSTLSWLD-----------PAPSTTDIVRNTVRRILTYPFLRQWALSSAAIKDVVAVLR----RGKRVVLRVLLAIHAVFESSETYYLLNTLYINDYATWIQS 442
BLAST of NO06G01360 vs. NCBI_GenBank
Match: XP_008865430.1 (hypothetical protein, variant [Aphanomyces invadans] >ETW05653.1 hypothetical protein, variant [Aphanomyces invadans]) HSP 1 Score: 139.4 bits (350), Expect = 3.900e-29 Identity = 112/328 (34.15%), Postives = 160/328 (48.78%), Query Frame = 0 Query: 142 NKANSSGSDLAHSLLEPRPCLGGLNVGGNGIRYGFNRQYYDVFTHLTNEMVVLDVLRLPNPE-NTPEEGEGGREDVREEREEEDFDGDRYLGDMVGRDEDPLYEEAMKITPFW----------------------LQKGIKG----------SEEG---WDDVEKEELAMLKNRAFLWGETEEEAREGRRAVGLGLLDLLLAFCYDWRTTGGDPTVESAWTMTTLSPSLCYLETXXXXXXXXXXXXXXXXXXXXXXXXXVVTYPYLRIWALAESCVEDVSGMLREGGGRGRRVMLRCLLRMRRVFRRTETHYLLNRLFLDDYCVMLQS 434 ++AN++ S L S +P+ + L+VG YGFN ++ D F E+ +VL LP PE +TP E R +R E+ DFD +RYL D ED ++ A+ PFW + GI S E + + E E L L R +L + E A V GLLD+L A+CYD RT GDPTVESAWT++ LS +L +L+ ++TYP+LR WAL+ + ++DV +LR RG+RV+LR LL + VF +ET+YLLN L+++DY +QS Sbjct: 77 SRANANDSSLL-SFEKPKEAM-SLHVGPP--TYGFNNRFSDFFKCWHGEL--HEVLSLPTPEASTPAE----RTTMRRALEDNDFDVERYLLDFANESEDEYFQAAIAYEPFWANLPVYTPPPXPAPTRKVLIADVTDGIANVTIQSDNPTPSNEPSVVFTEKELEALRRLPRREYLPFTSAEAA-----IVWHGLLDILAAYCYDMRTNQGDPTVESAWTISILSSTLSWLD-----------PAPSTTDIVRNTVRRILTYPFLRQWALSSAAIKDVVAVLR----RGKRVVLRVLLAIHAVFESSETYYLLNTLYINDYATWIQS 374
BLAST of NO06G01360 vs. NCBI_GenBank
Match: GBG34440.1 (Protein SHQ1-like [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 137.9 bits (346), Expect = 1.100e-28 Identity = 93/276 (33.70%), Postives = 141/276 (51.09%), Query Frame = 0 Query: 164 GLNVGGNGIRYGFNRQYYDVFTHLTNEMVVLDVLRLPNPENTPEEGEGGREDVREEREEEDFDGDRYLGDMVGRDEDPLYEEAMKITPFWLQKGIKGSEEGWDDVEKEELAMLKNRAFLWGETEEEAREGRRAVGLGLLDLLLAFCYDWRTTGGDPTVESAWTMTTLSPSLCYLETXXXXXXXXXXXXXXXXXXXXXXXXXVVTYPYLRIWALAESCVEDVSGMLREGGGRGRRVMLRCLLRMRRVFRRTETHYLLNRLFLDDYCVMLQSTVGQIV 440 G+ V +YGFN F + NE +++ LP P++TP E R R E E FD RYLGD+VG ++DP Y A+ G + EG+ + E+ ++ L+NR FL + E RA+ +LD+ LA+ YD R T G+ VESAWT+ LSP+L +L+ + YPY+R +LA +ED + +L++ GRR +LRCLL + R+F R++T YLLNRL++ + + +Q +V Sbjct: 247 GVQVDFKAPKYGFNHGMEGFFRDILNEFP--ELVDLPKPDSTP---EAERRPARIEAENAGFDVARYLGDLVGVEDDPFYRAAIDFA------GPRDPSEGFSEEEQVQMRQLRNREFL----DFSPLEQERAL-CAILDISLAYLYDLRATQGEHNVESAWTIRVLSPTLSWLDA-----------FTDVGEVTRAVTHRCIVYPYIRHLSLAARMLEDGAKVLQQ----GRRGLLRCLLGVHRIFARSDTFYLLNRLYVTEMAIWIQQVDAAVV 491
BLAST of NO06G01360 vs. NCBI_GenBank
Match: XP_008612034.1 (hypothetical protein SDRG_07949 [Saprolegnia diclina VS20] >EQC34628.1 hypothetical protein SDRG_07949 [Saprolegnia diclina VS20]) HSP 1 Score: 136.7 bits (343), Expect = 2.600e-28 Identity = 105/319 (32.92%), Postives = 150/319 (47.02%), Query Frame = 0 Query: 174 YGFNRQYYDVFTHLTNEMVVLDVLRLPNPENTPEEGEGGREDVREEREEEDFDGDRYLGDMVGRDEDPLYEEAMKITPFWLQKGIKGSEE----------------GWDDVEKEELAMLKNRAFLWGETEEEAREGRRAVGLGLLDLLLAFCYDWRTTGGDPTVESAWTMTTLSPSLCYLETXXXXXXXXXXXXXXXXXXXXXXXXXVVTYPYLRIWALAESCVEDVSGMLREGGGRGRRVMLRCLLRMRRVFRRTETHYLLNRLFLDDYCVMLQSTVGQIVVQELGEAWREGGQKGVRGVRVGKEEVGLGLVELERLL 477 YGFN ++ D F E V ++L LP P+ TP R ++ E++DFD +RYL D G DED + EA++ +PFW + + + E+E L L +R L E+ G GL DLL A+ YD R+T GD TVESAWT+ S +L +L ++TYP LR LA ++DV +L RG+RV+LRCLLR+ V +++ HYLLN LFLDDYCV +Q + +L + + K +R K+ G L +E +L Sbjct: 169 YGFNNRFTDFFKVWHGE--VSEILALPLPDTTPAT---DRAALQAATEDKDFDVERYLIDFGGADEDEYFAEALRFSPFWASLPVTKPPSTSLIQDMDTLSLDPVFEFTEAEQELLRRLPHREHLLSRDEQAVLLG------GLCDLLAAYAYDVRSTTGDATVESAWTIMINSATLAWLN-----------PSADLDAVATTSLRRMLTYPLLRQHTLALRVLDDVHDIL----ARGKRVVLRCLLRILDVLAKSDQHYLLNTLFLDDYCVWIQRQ-SDAALLDLAQRHKAATNK----LRADKDACGWALKHMEAML 456
BLAST of NO06G01360 vs. NCBI_GenBank
Match: XP_012729899.1 (protein SHQ1 homolog isoform X2 [Fundulus heteroclitus] >XP_012729916.1 protein SHQ1 homolog isoform X2 [Fundulus heteroclitus]) HSP 1 Score: 135.2 bits (339), Expect = 7.400e-28 Identity = 94/274 (34.31%), Postives = 133/274 (48.54%), Query Frame = 0 Query: 173 RYGFNRQYYDVFTHLTNEMVVLDVLRLPNPENTPEEGEGGREDVREEREEEDFDGDRYLGDMVGRDEDPLYEEAMKITPFWLQKGIKGSEEG-----WDDVEKEELAMLKNRAFLWGETEEEAREGRRAVGLGLLDLLLAFCYDWRTTGGDPTVESAWTMTTLSPSLCYLETXXXXXXXXXXXXXXXXXXXXXXXXXVVTYPYLRIWALAESCVEDVSGMLREGGGRGRRVMLRCLLRMRRVFRRTETHYLLNRLFLDDYCVMLQSTVGQIVVQ 442 +YGF Q VF+ L E+ DV+ L +PE T GR R E E F D YL D+ ED + TP+W + +EG + + EKE+L NR++L +T R LGL+D+LLA+ YD R+T G+ VES WT+ LS +LC+LET V+ YP R +AL S V D +L+ G G +LRCLL + +VFR E Y+LN L++ DYC+ +Q + V++ Sbjct: 152 KYGFGNQRSGVFSRLQEEL--SDVIDLKDPEGT---SASGRRRARLEAEASAFSSDHYLADLF---EDDEINRLLTFTPWWSKLSASAEQEGGAAVSFSEEEKEQLRKFANRSYLLDKT------SRYQAWLGLVDILLAYSYDVRSTEGEHNVESPWTVRKLSGTLCWLET-----------YSCLLDVLVSFGRRVLCYPLYRHFALVTSAVCDTVKILQSGRG----CVLRCLLHIHKVFRENEPAYILNDLYVTDYCIWIQRVKSKKVME 396 The following BLAST results are available for this feature:
BLAST of NO06G01360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G01360 ID=NO06G01360|Name=NO06G01360|organism=Nannochloropsis oceanica|type=gene|length=2791bpback to top protein sequence of NO06G01360.2 >NO06G01360.2-protein ID=NO06G01360.2-protein|Name=NO06G01360.2|organism=Nannochloropsis oceanica|type=polypeptide|length=661bpback to top protein sequence of NO06G01360.1 >NO06G01360.1-protein ID=NO06G01360.1-protein|Name=NO06G01360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=738bpback to top Synonyms
Publications
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