NO06G01360, NO06G01360 (gene) Nannochloropsis oceanica

Overview
NameNO06G01360
Unique NameNO06G01360
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2791
Alignment locationchr6:436613..439403 -

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Properties
Property NameValue
DescriptionShq1-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:436613..439403 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008978HSP20-like_chaperone
IPR007052CS_dom
IPR007009SHQ1
Vocabulary: Biological Process
TermDefinition
GO:0000493box H/ACA snoRNP assembly
Homology
BLAST of NO06G01360 vs. NCBI_GenBank
Match: XP_002291062.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91169.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 148.7 bits (374), Expect = 6.500e-32
Identity = 106/312 (33.97%), Postives = 155/312 (49.68%), Query Frame = 0
Query:  174 YGFNRQYYDVFTHLTNEMVVLDVLRLPNP------ENTPEEGEGGREDVREEREEEDFDGDRYLGDM-VGRDEDPLYEEAMKITPFW-----LQKGIKGSEEGWDDVEKEELAMLKNRAFLWGETEEEAREGRRAVGLGLLDLLLAFCYDWRTTGGDPTVESAWTMTTLSPSLCYLETXXXXXXXXXXXXXXXXXXXXXXXXXVVTYPYLRIWALAESCVEDVSGMLREGGGRGRRVMLRCLLRMRRVFRRTETHYLLNRLFLDDYCVMLQSTVGQIVVQELGEAWREGGQKGVRGVRVGKEEVGLGLVELE 474
            YG  + Y  VF     E +  ++L  PNP      E+  E  E  R ++R E E + FD DRYL D+ +  + D +++ AMK+ P W     +Q  +  +   +   E   LA L  +            E +R+  L LLD+L+A+ YD RTT GD TVES+WT+  LSPSL +LE+                          + YPYLR + LA + V+DV  +L     RGRR ++RCLL++ R+  ++E HYL N+L++D     +Q    +  VQ+ G    E    G     +GKE + LGLVELE
Sbjct:  185 YGLFQHYSSVFRDYAREGLAHEMLECPNPDEMYENEDMSEALETNRREMRLEVENDKFDPDRYLADLNISEEGDMIFDSAMKMVPHWIAASTMQSSVDTTNTFFSSEESHFLATLPTQI---NNIPTLTSEQQRSAYLSLLDVLIAYAYDHRTTDGDATVESSWTVMILSPSLSWLES-------YNPPYDTVAEVVRWCIRRTLIYPYLRSYTLARTLVKDVCQILL----RGRRTVIRCLLQLHRILEKSEAHYLFNKLYIDPLIGWMQQ-CEEKEVQDFGREVHEMLSDGDGDGSLGKECLNLGLVELE 481          
BLAST of NO06G01360 vs. NCBI_GenBank
Match: XP_009823756.1 (hypothetical protein H257_01979 [Aphanomyces astaci] >ETV86957.1 hypothetical protein H257_01979 [Aphanomyces astaci])

HSP 1 Score: 143.7 bits (361), Expect = 2.100e-30
Identity = 116/326 (35.58%), Postives = 151/326 (46.32%), Query Frame = 0
Query:  174 YGFNRQYYDVFTHLTNEMVVLDVLRLPNPE-NTPEEGEGGREDVREEREEEDFDGDRYLGDMVGRDEDPLYEEAMKITPFW----------------------LQKGIKGSEEGWDDVEKEELAMLKNRAFLWGETEEEAREGRRAVGLGLLDLLLAFCYDWRTTGGDPTVESAWTMTTLSPSLCYLETXXXXXXXXXXXXXXXXXXXXXXXXXVVTYPYLRIWALAESCVEDVSGMLREGGGRGRRVMLRCLLRMRRVFRRTETHYLLNRLFLDDYCVMLQSTVGQIVVQELGEAWREGGQKGVRGVRVGKEEVGLGLVELERLL 477
            YGFN ++ D F     E+   +VL LP PE +TP E    R  +R E E+ DFD +RYL D   + ED  ++ AM  TPFW                          +  S     D EKE L  L  R +L     E A      V  GLLD+L A+ YD RT+ GDPTVESAWT++ LS +L +L+                           + YP+LR W L    V DV  MLR    RG+RV+LR LL +  +F  +ET+YLLN LF++DY   +QST        L E      Q         K++ G GLVE+E  L
Sbjct:  170 YGFNNRFSDFFKCWHGEL--HEVLSLPTPETSTPAE----RTKMRLELEDHDFDVERYLLDFANQGEDDHFKAAMSYTPFWAALPVWTPPPPKVLIAHVTDSLANVTLHASSIELTDKEKEALLRLPRREYLAFTAAEAA-----VVWHGLLDILAAYSYDLRTSEGDPTVESAWTISILSSTLSWLD----------PATTTVADVVRNTMRRTLVYPFLRQWDLGVVVVNDVVAMLR----RGKRVVLRALLAIHSIFETSETYYLLNTLFINDYATWIQSTAD----AHLNE---YANQLDAALAAFHKQQSGWGLVEIEAAL 463          
BLAST of NO06G01360 vs. NCBI_GenBank
Match: OQR95679.1 (SHQ1-like [Thraustotheca clavata])

HSP 1 Score: 143.7 bits (361), Expect = 2.100e-30
Identity = 98/274 (35.77%), Postives = 135/274 (49.27%), Query Frame = 0
Query:  174 YGFNRQYYDVFTHLTNEMVVLDVLRLPNPENTPEEGEGGREDVREEREEEDFDGDRYLGDMVGRDEDPLYEEAMKITPFWLQKGIKGSEE---------------GWDDVEKEELAMLKNRAFLWGETEEEAREGRRAVGLGLLDLLLAFCYDWRTTGGDPTVESAWTMTTLSPSLCYLETXXXXXXXXXXXXXXXXXXXXXXXXXVVTYPYLRIWALAESCVEDVSGMLREGGGRGRRVMLRCLLRMRRVFRRTETHYLLNRLFLDDYCVMLQ 433
            YGFN ++ D F     E  V +++ LP P+ TP      R +++   E++DFD +RYL D     ED  + EAM   PFW    I  S                  ++D EKE L  L NR  L    E+    G      GL D+L A+ YD RTT GD TVESAWT+   S +L +L                           ++TYP LR  +LA   + DV  +L+    RG+RV+LRCLLR+  +  ++ETHYLLN L+++DYCV +Q
Sbjct: 1120 YGFNNRFQDFFKCWHGE--VSEIIALPEPDKTP---ANDRMNLQTTTEDKDFDVERYLIDFANESEDEYFHEAMNYQPFWTSMPITKSTPTLVMAMDAMSLDPPFEFNDNEKEVLRRLPNREHLLSRGEQSILLG------GLCDILAAYAYDLRTTQGDATVESAWTIMITSSTLAWLN-----------PNADLNIVTKSNLRRMLTYPLLRQHSLACQALNDVCEILQ----RGKRVVLRCLLRLYDILSKSETHYLLNTLYIEDYCVWIQ 1367          
BLAST of NO06G01360 vs. NCBI_GenBank
Match: CBN79567.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 142.1 bits (357), Expect = 6.100e-30
Identity = 108/353 (30.59%), Postives = 148/353 (41.93%), Query Frame = 0
Query:  174 YGFNRQYYDVFTHLTNEMVVLDVLRLPNPENTPEEGEGGREDVREEREEEDFDGDRYLGDMVGRDEDPLYEEAMKITPFW---------------------------------------------------------------LQKGIKG------------------SEEGWDDVEKEELAMLKNRAFLWGETEEEAREGRRAVGLGLLDLLLAFCYDWRTTGGDPTVESAWTMTTLSPSLCYLETXXXXXXXXXXXXXXXXXXXXXXXXXV-----VTYPYLRIWALAESCVEDVSGMLREGGGRGRRVMLRCLLRMRRVFRRTETHYLLNRLFLDDYCVMLQSTVGQIVV 441
            YGFN ++   FT L  E+   +++ LPNP+ TP E    R  +R E E+  FD DRYLGD+   +EDPL  EA+   P W                                                               L +G +G                   EEG+ +VE+E++  L NR +L    E  + E RR + LGL D+L A+ YD RTT GD TVES WT+  LSP L +LE                                + +PYLR+W L      DV  +L      G+R +LRCLL+   +  R E HYLLN+LF++DYCV +Q    + +V
Sbjct:  617 YGFNDKFSGFFTSLREEL--REMIHLPNPDKTPAE---ARRGLRLEHEQAAFDPDRYLGDLFTEEEDPLLTEALAFEPHWRLRLGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREGAPEDGALLQGARGGVEGVVEAXXXXXXXXXEEEEGFTEVEQEQMRRLPNREYL---IEAGSAEERRVL-LGLADILFAYAYDHRTTTGDATVESPWTVAVLSPLLSWLEAPAEGGDVAESSPVAADASAETDVALAGIRRSLIFPYLRVWELGALVARDVRDIL----AAGKRCILRCLLQTYALMERGEVHYLLNKLFVEDYCVWIQKASEESLV 956          
BLAST of NO06G01360 vs. NCBI_GenBank
Match: OQS01434.1 (hypothetical protein ACHHYP_00735 [Achlya hypogyna])

HSP 1 Score: 140.2 bits (352), Expect = 2.300e-29
Identity = 110/319 (34.48%), Postives = 152/319 (47.65%), Query Frame = 0
Query:  173 RYGFNRQYYDVFTHLTNEMVVLDVLRLPNPENTPEEGEGGREDVREEREEEDFDGDRYLGDMVGRDEDPLYEEAMKITPFW--LQKGIKGSE-------------EGWDDVEKEELAMLKNRAFLWGETEEEAREGRRAVGLGLLDLLLAFCYDWRTTGGDPTVESAWTMTTLSPSLCYLETXXXXXXXXXXXXXXXXXXXXXXXXXVVTYPYLRIWALAESCVEDVSGMLREGGGRGRRVMLRCLLRMRRVFRRTETHYLLNRLFLDDYCVMLQSTVGQIVVQELGEAWREGGQKGVRGVRVGKEEVGLGLVELERLL 477
            RYGFN ++ D F     E  V ++L LP P+ TP      R  ++   E+ DFD +RYL D  G +ED  + EAM  TPFW  L +  K                  + + E E L  L  R  L    E+    G      GL DLL ++ YD RTT GD TVESAWT+   S +L +L                           V++YP LR  ALA   +EDV  +L+    RG+RV+LRCLL +  V  +++ HYLLN LFL+DYCV +Q     + + +L E +    +  V  +R  K+  G  L  +E +L
Sbjct: 1516 RYGFNNRFSDFFKCWHGE--VAEILALPAPDTTPAH---DRTSLQHAAEDRDFDVERYLIDFAGMEEDEYFAEAMGYTPFWAALPETKKAPSLVVVMDSLSLDPPFVFTEPELELLRRLPAREHLLSRDEQAVLFG------GLCDLLASYAYDLRTTQGDSTVESAWTIMITSSTLAWLN-----------PTADLAAVAKSTLRRVLSYPLLRQHALALRVLEDVVAILK----RGKRVVLRCLLTVLDVLGKSDQHYLLNSLFLEDYCVWIQRQ-SDVALLDLAERF----EAHVAALRADKDSCGWALKHMEAML 1803          
BLAST of NO06G01360 vs. NCBI_GenBank
Match: XP_008865429.1 (hypothetical protein H310_03377 [Aphanomyces invadans] >ETW05652.1 hypothetical protein H310_03377 [Aphanomyces invadans])

HSP 1 Score: 139.4 bits (350), Expect = 3.900e-29
Identity = 112/328 (34.15%), Postives = 160/328 (48.78%), Query Frame = 0
Query:  142 NKANSSGSDLAHSLLEPRPCLGGLNVGGNGIRYGFNRQYYDVFTHLTNEMVVLDVLRLPNPE-NTPEEGEGGREDVREEREEEDFDGDRYLGDMVGRDEDPLYEEAMKITPFW----------------------LQKGIKG----------SEEG---WDDVEKEELAMLKNRAFLWGETEEEAREGRRAVGLGLLDLLLAFCYDWRTTGGDPTVESAWTMTTLSPSLCYLETXXXXXXXXXXXXXXXXXXXXXXXXXVVTYPYLRIWALAESCVEDVSGMLREGGGRGRRVMLRCLLRMRRVFRRTETHYLLNRLFLDDYCVMLQS 434
            ++AN++ S L  S  +P+  +  L+VG     YGFN ++ D F     E+   +VL LP PE +TP E    R  +R   E+ DFD +RYL D     ED  ++ A+   PFW                      +  GI            S E    + + E E L  L  R +L   + E A      V  GLLD+L A+CYD RT  GDPTVESAWT++ LS +L +L+                          ++TYP+LR WAL+ + ++DV  +LR    RG+RV+LR LL +  VF  +ET+YLLN L+++DY   +QS
Sbjct:  145 SRANANDSSLL-SFEKPKEAM-SLHVGPP--TYGFNNRFSDFFKCWHGEL--HEVLSLPTPEASTPAE----RTTMRRALEDNDFDVERYLLDFANESEDEYFQAAIAYEPFWANLPVYTPPPXPAPTRKVLIADVTDGIANVTIQSDNPTPSNEPSVVFTEKELEALRRLPRREYLPFTSAEAA-----IVWHGLLDILAAYCYDMRTNQGDPTVESAWTISILSSTLSWLD-----------PAPSTTDIVRNTVRRILTYPFLRQWALSSAAIKDVVAVLR----RGKRVVLRVLLAIHAVFESSETYYLLNTLYINDYATWIQS 442          
BLAST of NO06G01360 vs. NCBI_GenBank
Match: XP_008865430.1 (hypothetical protein, variant [Aphanomyces invadans] >ETW05653.1 hypothetical protein, variant [Aphanomyces invadans])

HSP 1 Score: 139.4 bits (350), Expect = 3.900e-29
Identity = 112/328 (34.15%), Postives = 160/328 (48.78%), Query Frame = 0
Query:  142 NKANSSGSDLAHSLLEPRPCLGGLNVGGNGIRYGFNRQYYDVFTHLTNEMVVLDVLRLPNPE-NTPEEGEGGREDVREEREEEDFDGDRYLGDMVGRDEDPLYEEAMKITPFW----------------------LQKGIKG----------SEEG---WDDVEKEELAMLKNRAFLWGETEEEAREGRRAVGLGLLDLLLAFCYDWRTTGGDPTVESAWTMTTLSPSLCYLETXXXXXXXXXXXXXXXXXXXXXXXXXVVTYPYLRIWALAESCVEDVSGMLREGGGRGRRVMLRCLLRMRRVFRRTETHYLLNRLFLDDYCVMLQS 434
            ++AN++ S L  S  +P+  +  L+VG     YGFN ++ D F     E+   +VL LP PE +TP E    R  +R   E+ DFD +RYL D     ED  ++ A+   PFW                      +  GI            S E    + + E E L  L  R +L   + E A      V  GLLD+L A+CYD RT  GDPTVESAWT++ LS +L +L+                          ++TYP+LR WAL+ + ++DV  +LR    RG+RV+LR LL +  VF  +ET+YLLN L+++DY   +QS
Sbjct:   77 SRANANDSSLL-SFEKPKEAM-SLHVGPP--TYGFNNRFSDFFKCWHGEL--HEVLSLPTPEASTPAE----RTTMRRALEDNDFDVERYLLDFANESEDEYFQAAIAYEPFWANLPVYTPPPXPAPTRKVLIADVTDGIANVTIQSDNPTPSNEPSVVFTEKELEALRRLPRREYLPFTSAEAA-----IVWHGLLDILAAYCYDMRTNQGDPTVESAWTISILSSTLSWLD-----------PAPSTTDIVRNTVRRILTYPFLRQWALSSAAIKDVVAVLR----RGKRVVLRVLLAIHAVFESSETYYLLNTLYINDYATWIQS 374          
BLAST of NO06G01360 vs. NCBI_GenBank
Match: GBG34440.1 (Protein SHQ1-like [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 137.9 bits (346), Expect = 1.100e-28
Identity = 93/276 (33.70%), Postives = 141/276 (51.09%), Query Frame = 0
Query:  164 GLNVGGNGIRYGFNRQYYDVFTHLTNEMVVLDVLRLPNPENTPEEGEGGREDVREEREEEDFDGDRYLGDMVGRDEDPLYEEAMKITPFWLQKGIKGSEEGWDDVEKEELAMLKNRAFLWGETEEEAREGRRAVGLGLLDLLLAFCYDWRTTGGDPTVESAWTMTTLSPSLCYLETXXXXXXXXXXXXXXXXXXXXXXXXXVVTYPYLRIWALAESCVEDVSGMLREGGGRGRRVMLRCLLRMRRVFRRTETHYLLNRLFLDDYCVMLQSTVGQIV 440
            G+ V     +YGFN      F  + NE    +++ LP P++TP   E  R   R E E   FD  RYLGD+VG ++DP Y  A+         G +   EG+ + E+ ++  L+NR FL    +    E  RA+   +LD+ LA+ YD R T G+  VESAWT+  LSP+L +L+                           + YPY+R  +LA   +ED + +L++    GRR +LRCLL + R+F R++T YLLNRL++ +  + +Q     +V
Sbjct:  247 GVQVDFKAPKYGFNHGMEGFFRDILNEFP--ELVDLPKPDSTP---EAERRPARIEAENAGFDVARYLGDLVGVEDDPFYRAAIDFA------GPRDPSEGFSEEEQVQMRQLRNREFL----DFSPLEQERAL-CAILDISLAYLYDLRATQGEHNVESAWTIRVLSPTLSWLDA-----------FTDVGEVTRAVTHRCIVYPYIRHLSLAARMLEDGAKVLQQ----GRRGLLRCLLGVHRIFARSDTFYLLNRLYVTEMAIWIQQVDAAVV 491          
BLAST of NO06G01360 vs. NCBI_GenBank
Match: XP_008612034.1 (hypothetical protein SDRG_07949 [Saprolegnia diclina VS20] >EQC34628.1 hypothetical protein SDRG_07949 [Saprolegnia diclina VS20])

HSP 1 Score: 136.7 bits (343), Expect = 2.600e-28
Identity = 105/319 (32.92%), Postives = 150/319 (47.02%), Query Frame = 0
Query:  174 YGFNRQYYDVFTHLTNEMVVLDVLRLPNPENTPEEGEGGREDVREEREEEDFDGDRYLGDMVGRDEDPLYEEAMKITPFWLQKGIKGSEE----------------GWDDVEKEELAMLKNRAFLWGETEEEAREGRRAVGLGLLDLLLAFCYDWRTTGGDPTVESAWTMTTLSPSLCYLETXXXXXXXXXXXXXXXXXXXXXXXXXVVTYPYLRIWALAESCVEDVSGMLREGGGRGRRVMLRCLLRMRRVFRRTETHYLLNRLFLDDYCVMLQSTVGQIVVQELGEAWREGGQKGVRGVRVGKEEVGLGLVELERLL 477
            YGFN ++ D F     E  V ++L LP P+ TP      R  ++   E++DFD +RYL D  G DED  + EA++ +PFW    +                      + + E+E L  L +R  L    E+    G      GL DLL A+ YD R+T GD TVESAWT+   S +L +L                           ++TYP LR   LA   ++DV  +L     RG+RV+LRCLLR+  V  +++ HYLLN LFLDDYCV +Q       + +L +  +    K    +R  K+  G  L  +E +L
Sbjct:  169 YGFNNRFTDFFKVWHGE--VSEILALPLPDTTPAT---DRAALQAATEDKDFDVERYLIDFGGADEDEYFAEALRFSPFWASLPVTKPPSTSLIQDMDTLSLDPVFEFTEAEQELLRRLPHREHLLSRDEQAVLLG------GLCDLLAAYAYDVRSTTGDATVESAWTIMINSATLAWLN-----------PSADLDAVATTSLRRMLTYPLLRQHTLALRVLDDVHDIL----ARGKRVVLRCLLRILDVLAKSDQHYLLNTLFLDDYCVWIQRQ-SDAALLDLAQRHKAATNK----LRADKDACGWALKHMEAML 456          
BLAST of NO06G01360 vs. NCBI_GenBank
Match: XP_012729899.1 (protein SHQ1 homolog isoform X2 [Fundulus heteroclitus] >XP_012729916.1 protein SHQ1 homolog isoform X2 [Fundulus heteroclitus])

HSP 1 Score: 135.2 bits (339), Expect = 7.400e-28
Identity = 94/274 (34.31%), Postives = 133/274 (48.54%), Query Frame = 0
Query:  173 RYGFNRQYYDVFTHLTNEMVVLDVLRLPNPENTPEEGEGGREDVREEREEEDFDGDRYLGDMVGRDEDPLYEEAMKITPFWLQKGIKGSEEG-----WDDVEKEELAMLKNRAFLWGETEEEAREGRRAVGLGLLDLLLAFCYDWRTTGGDPTVESAWTMTTLSPSLCYLETXXXXXXXXXXXXXXXXXXXXXXXXXVVTYPYLRIWALAESCVEDVSGMLREGGGRGRRVMLRCLLRMRRVFRRTETHYLLNRLFLDDYCVMLQSTVGQIVVQ 442
            +YGF  Q   VF+ L  E+   DV+ L +PE T      GR   R E E   F  D YL D+    ED      +  TP+W +      +EG     + + EKE+L    NR++L  +T       R    LGL+D+LLA+ YD R+T G+  VES WT+  LS +LC+LET                         V+ YP  R +AL  S V D   +L+ G G     +LRCLL + +VFR  E  Y+LN L++ DYC+ +Q    + V++
Sbjct:  152 KYGFGNQRSGVFSRLQEEL--SDVIDLKDPEGT---SASGRRRARLEAEASAFSSDHYLADLF---EDDEINRLLTFTPWWSKLSASAEQEGGAAVSFSEEEKEQLRKFANRSYLLDKT------SRYQAWLGLVDILLAYSYDVRSTEGEHNVESPWTVRKLSGTLCWLET-----------YSCLLDVLVSFGRRVLCYPLYRHFALVTSAVCDTVKILQSGRG----CVLRCLLHIHKVFRENEPAYILNDLYVTDYCIWIQRVKSKKVME 396          
The following BLAST results are available for this feature:
BLAST of NO06G01360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_002291062.16.500e-3233.97predicted protein [Thalassiosira pseudonana CCMP13... [more]
XP_009823756.12.100e-3035.58hypothetical protein H257_01979 [Aphanomyces astac... [more]
OQR95679.12.100e-3035.77SHQ1-like [Thraustotheca clavata][more]
CBN79567.16.100e-3030.59conserved unknown protein [Ectocarpus siliculosus][more]
OQS01434.12.300e-2934.48hypothetical protein ACHHYP_00735 [Achlya hypogyna... [more]
XP_008865429.13.900e-2934.15hypothetical protein H310_03377 [Aphanomyces invad... [more]
XP_008865430.13.900e-2934.15hypothetical protein, variant [Aphanomyces invadan... [more]
GBG34440.11.100e-2833.70Protein SHQ1-like [Aurantiochytrium sp. FCC1311][more]
XP_008612034.12.600e-2832.92hypothetical protein SDRG_07949 [Saprolegnia dicli... [more]
XP_012729899.17.400e-2834.31protein SHQ1 homolog isoform X2 [Fundulus heterocl... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL089nonsL089Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR145ngnoR145Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000322NSK000322Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G01360.2NO06G01360.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO06G01360.1NO06G01360.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100121g11gene4361Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G01360.2NO06G01360.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO06G01360.1NO06G01360.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G01360 ID=NO06G01360|Name=NO06G01360|organism=Nannochloropsis oceanica|type=gene|length=2791bp
ACAGATTTGGCAGTAAGCTTAAACGTCCAACGCGGCGGTTCCACTACTTT
TTGACACCTCCACGCTTCAAAAGCCTACCGGACTCCTCTTGCCCCTTCGA
GGCCCATCCCTCGACAACACACAATGCTAGTGCCCAAGTTTAGCCTCCAG
CAGACCACTGAGACCGTGGTGGTGACCATCAAACTACCATACATCCGTGT
GGGGGATTCCGAAGTTTCCGTGgtacgtggaatgtcgcttgattcctagc
ttttggcttcgaagagtatcctctgctcttacctcttgcccccctccctc
tcctcccttcctacctacctatccgcacgttaaatagGATGGGAAAGACT
TTGCCTTTTACTGCAAGCCCTATTTGCTCAAGCTATATTTTCCCCACCCC
CTGAAGAATAACGAAGAGGACGAAAGTCATTGCCGCGCTGTGTACGATTC
GGACTTGgtacgtgcgggaaatattggtggtggtgtgttggtggtcgaag
taagatagatgagatccttcgatgcttgcttatgcctgttcgcgacaatc
tacgatgcaattctataagctttcgtggcttgaaagtgaagtcgaagcaa
gtccttcctttatccctttttctcattttatcattctccctccctccctc
cttcctcccttccatagGATCACGGCACAATGACCCTTCATCTTCTCAAG
GAAGATCCTGGACAATTTTTCGAAGATCTCGATCTAACAACCACACTCCT
TCAGCCCGTTCGCTCCTTTGACCCGTCCTACTCCCCTGCCTCATCTTCCA
TCTCCACTGTTGCTGCTGCCGCCATTCCTAGCAGTAGCAGCAGCAGCAAC
AGCTGCAGCAGAGCGCCTATCTACCCGACGGGCCCGCCATCGATCGAGGT
ACTGCATTCGGAAGATTTTTTGGGTCCTCCTCCCCCTACCAAGGTTCCCG
ATCGAGCAACTGGAACAACACGAACAGCAGCAGCAGCAGTACCGCCACCA
CCACCAGCGAATGCCGACCCTCCTCCTTCTCCTCCTTCCCCTCCTCTTCC
TCCTTCTCCACCTGTCCCGCTTGAAGGTTTTCCAACCATCTCAACAAATA
CCAATAAGGCTAACAGCAGCGGATCCGACCTCGCCCATTCCCTCCTCGAA
CCCAGACCTTGCCTCGGCGGTCTCAACGTCGGTGGAAACGGTATCCGTTA
CGGCTTCAATCGTCAATACTACGACGTCTTCACCCACCTTACAAACGAAA
TGGTCGTCCTCGATGTTTTGCGTCTCCCCAACCCGGAAAACACACCGGAG
GAGGGCGAGGGTGGGAGGGAGGACGTGAGGGAGGAAAGAGAGGAGGAGGA
TTTTGATGGGGACAGATACCTGGGAGATATGGTGGGGAGAGACGAAGACC
CTCTATATGAAGAGGCGATGAAGATCACGCCATTTTGGCTGCAAAAGGGC
ATAAAAGGGAGTGAAGAAGGGTGGGATGATGTCGAGAAGGAGGAGCTGGC
GATGTTGAAGAATAGGGCATTCCTGTGGGGGGAGACGGAGGAGGAGGCGA
GGGAGGGAAGGAGGGCGGTCGGGCTGGGGCTGCTGGATCTCTTGCTGGCC
TTTTGTTATGATTGGAGGACGACGGGGGGAGACCCGACGGTCGAGTCCGC
GTGGACGATGACTACCTTGTCTCCTTCTTTGTGTTATTTGGAGACATACA
GGGGGAGGTATGGAGGAAGGGAGGGGGGGAATGAGGGGGTCAGGAAAGTC
GTGCGGACTTTCATGAGGCGGGTCGTGACGTATCCGTACCTGCGGATATG
GGCCCTGGCGGAGAGTTGTGTGGAAGACGTCAGTGGGATGCTACGGGAGG
GCGGGGGGAGGGGTAGGAGGGTCATGTTGAGGTGTTTGTTGAGGATGAGG
CGAGTGTTTCGGAGGACGGAGACGCATTATCTGCTGAATCGGTTGTTTTT
AGATGATTACTGTGTGATGTTGCAGTCGACAGTGGGACAGATAGTGGTGC
AGGAACTGGGGGAGGCCTGGAGGGAAGGAGGGCAGAAAGGGGTGAGGGGC
GTGCGGGTGGGAAAGGAGGAGGTGGGGTTGGGGTTGGTGGAGCTGGAGAG
GCTGTTGGAGGAGAAAGATGAGGAGGAGGAGGAGGATGATGATGATGAGG
AGGAGGACTATGAAGGGGAAGAGAGTGACAGCGAGGAGGTGGAGGAAGAG
GAAAGCTCGTCGGAGGAAGGGGAAGAGGCAGAGGTAGAGGTAGAGGAAGA
AGAAGAGGAAGAGGAAGAAGAAGAGGGGACAAGCATTGTGACGGCGGCGT
TGAGAGAGGCATCCTTGACGGAGAAGCAGAAAGGGCGACAGGGAGAGAAA
GGTGCTGTTGAGGAGAAGGAGGGGAAGGGAGAGGGAGAGGATTTGTCGGT
GGACATTGCATCGCTCTCAATGGACCCGAAGAGGCCAAAACTCGATTTTG
GGGAGGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGAAGGAGAATTG
TTGGTATCGGCGAAGTCAAATATCTGGATTATACCGCGTGGTGGGGAGGA
TAATGAAGAAAGAGGAGGAGAAGGAGGAGGAAAAGGATATGACGGTGGAG
AAAAGGGTTGGAGAAAGACAAAGGCTCAGGAAAGAGGGAGACCGTTGATA
GAGGAGTTGTAGAGAGAATCGATGGTGGAACCAAGCAAAAAGTATAAAAA
TGTATTCATACAACAGAAGCTGGAAAGAAATTTAAGGAGAAGGGAGCCCG
CACAAGTGTAGAAAGATAGAAGAAAAGGTGATTGAAGACTA
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protein sequence of NO06G01360.2

>NO06G01360.2-protein ID=NO06G01360.2-protein|Name=NO06G01360.2|organism=Nannochloropsis oceanica|type=polypeptide|length=661bp
MTLHLLKEDPGQFFEDLDLTTTLLQPVRSFDPSYSPASSSISTVAAAAIP
SSSSSSNSCSRAPIYPTGPPSIEVLHSEDFLGPPPPTKVPDRATGTTRTA
AAAVPPPPPANADPPPSPPSPPLPPSPPVPLEGFPTISTNTNKANSSGSD
LAHSLLEPRPCLGGLNVGGNGIRYGFNRQYYDVFTHLTNEMVVLDVLRLP
NPENTPEEGEGGREDVREEREEEDFDGDRYLGDMVGRDEDPLYEEAMKIT
PFWLQKGIKGSEEGWDDVEKEELAMLKNRAFLWGETEEEAREGRRAVGLG
LLDLLLAFCYDWRTTGGDPTVESAWTMTTLSPSLCYLETYRGRYGGREGG
NEGVRKVVRTFMRRVVTYPYLRIWALAESCVEDVSGMLREGGGRGRRVML
RCLLRMRRVFRRTETHYLLNRLFLDDYCVMLQSTVGQIVVQELGEAWREG
GQKGVRGVRVGKEEVGLGLVELERLLEEKDEEEEEDDDDEEEDYEGEESD
SEEVEEEESSSEEGEEAEVEVEEEEEEEEEEEGTSIVTAALREASLTEKQ
KGRQGEKGAVEEKEGKGEGEDLSVDIASLSMDPKRPKLDFGEGGGGGGRG
GGGEGELLVSAKSNIWIIPRGGEDNEERGGEGGGKGYDGGEKGWRKTKAQ
ERGRPLIEEL*
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protein sequence of NO06G01360.1

>NO06G01360.1-protein ID=NO06G01360.1-protein|Name=NO06G01360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=738bp
MLVPKFSLQQTTETVVVTIKLPYIRVGDSEVSVDGKDFAFYCKPYLLKLY
FPHPLKNNEEDESHCRAVYDSDLDHGTMTLHLLKEDPGQFFEDLDLTTTL
LQPVRSFDPSYSPASSSISTVAAAAIPSSSSSSNSCSRAPIYPTGPPSIE
VLHSEDFLGPPPPTKVPDRATGTTRTAAAAVPPPPPANADPPPSPPSPPL
PPSPPVPLEGFPTISTNTNKANSSGSDLAHSLLEPRPCLGGLNVGGNGIR
YGFNRQYYDVFTHLTNEMVVLDVLRLPNPENTPEEGEGGREDVREEREEE
DFDGDRYLGDMVGRDEDPLYEEAMKITPFWLQKGIKGSEEGWDDVEKEEL
AMLKNRAFLWGETEEEAREGRRAVGLGLLDLLLAFCYDWRTTGGDPTVES
AWTMTTLSPSLCYLETYRGRYGGREGGNEGVRKVVRTFMRRVVTYPYLRI
WALAESCVEDVSGMLREGGGRGRRVMLRCLLRMRRVFRRTETHYLLNRLF
LDDYCVMLQSTVGQIVVQELGEAWREGGQKGVRGVRVGKEEVGLGLVELE
RLLEEKDEEEEEDDDDEEEDYEGEESDSEEVEEEESSSEEGEEAEVEVEE
EEEEEEEEEGTSIVTAALREASLTEKQKGRQGEKGAVEEKEGKGEGEDLS
VDIASLSMDPKRPKLDFGEGGGGGGRGGGGEGELLVSAKSNIWIIPRGGE
DNEERGGEGGGKGYDGGEKGWRKTKAQERGRPLIEEL*
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Synonyms
Publications