NO06G01340, NO06G01340 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G01340 vs. NCBI_GenBank
Match: EWM26168.1 (Peptidyl-prolyl cis-trans isomerase, FKBP-type [Nannochloropsis gaditana]) HSP 1 Score: 553.5 bits (1425), Expect = 6.000e-154 Identity = 290/398 (72.86%), Postives = 331/398 (83.17%), Query Frame = 0 Query: 59 LRHERPLPYLPSSTATTLRSSTGSGWRGGPRPDDEPVDLSGDGGVMKRVIRHGFGYKQESPPPHAYCKIAFVMKTSTGQVIADRMKDPMEFMLGLEQPEVIPGWELAVASMKPNEVAEITCSPDYAFGAAEGYEDKIPPGATIITRLRLVDWRSLKGAGSTNVEDTRDLTKKWREEIDQGTSPMTEWAAPPTTKGRSGGKEGGRVEEGANVSSGGPLADAQXXXXXXXXXXXXXXXXXXXXXXXXXDKEFSPMSSPRVEAMPEDLNKGMKVDVDDPSVQQKLNKNQVVIGTAPQYKWKERAGFLELVVPVPEEVKKEDVLVHLTNRVLMVGFKTPEKKEKEQWVVGGDLFGPIELAESFWVLSKDYTDELTEGKTCIEVRLEKKEPMKRIWSTVFKDQ 457 L H P P + S + S+ SGWR GPRP DEPVDLSGDGGV+K V+R G+GY Q++PPPH+YCK+AFVMKTSTGQ+IA+RMK PMEFMLGL PEVI GWE+AVA+MKPNEVAEITCSP+YAFG+AEGY+DKIPPGA I+TRL+L++WR+L+GAGST+VEDTRDLTKKWREEID+GTSPMT WAAPPT + S G+ V N GPLA+ XXXXXXXXXXXXXXXX FSP S+PRVEA+PED NKGMKVD+DD +++ KLN NQVVIGTAPQYKWKERAG++E+VVPVPEEVKKEDVLVHLTNRVL VGFKTPE KE W++GGDLFGPIEL SFWVLSKDYTDELTEGKTC+EVRLEKKEPM+RIWSTVFKDQ Sbjct: 76 LVHSPPSPLISS----PIMSAMNSGWRSGPRPSDEPVDLSGDGGVLKTVLRPGYGYNQQTPPPHSYCKVAFVMKTSTGQLIANRMKKPMEFMLGLANPEVIRGWEMAVATMKPNEVAEITCSPEYAFGSAEGYQDKIPPGAIIVTRLQLLNWRTLQGAGSTDVEDTRDLTKKWREEIDEGTSPMTTWAAPPTVRKDSIGEATAEVNR-ENGGGSGPLAEXXXXXXXXXXXXXXXXXXGIDG--------FSPPSTPRVEAIPEDANKGMKVDIDDMAMKNKLNPNQVVIGTAPQYKWKERAGYMEVVVPVPEEVKKEDVLVHLTNRVLTVGFKTPE--NKESWIIGGDLFGPIELDSSFWVLSKDYTDELTEGKTCVEVRLEKKEPMRRIWSTVFKDQ 458
BLAST of NO06G01340 vs. NCBI_GenBank
Match: XP_005853381.1 (translation initiation factor 3 subunit G [Nannochloropsis gaditana CCMP526] >EKU22978.1 translation initiation factor 3 subunit G [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 520.0 bits (1338), Expect = 7.400e-144 Identity = 273/379 (72.03%), Postives = 314/379 (82.85%), Query Frame = 0 Query: 59 LRHERPLPYLPSSTATTLRSSTGSGWRGGPRPDDEPVDLSGDGGVMKRVIRHGFGYKQESPPPHAYCKIAFVMKTSTGQVIADRMKDPMEFMLGLEQPEVIPGWELAVASMKPNEVAEITCSPDYAFGAAEGYEDKIPPGATIITRLRLVDWRSLKGAGSTNVEDTRDLTKKWREEIDQGTSPMTEWAAPPTTKGRSGGKEGGRVEEGANVSSGGPLADAQXXXXXXXXXXXXXXXXXXXXXXXXXDKEFSPMSSPRVEAMPEDLNKGMKVDVDDPSVQQKLNKNQVVIGTAPQYKWKERAGFLELVVPVPEEVKKEDVLVHLTNRVLMVGFKTPEKKEKEQWVVGGDLFGPIELAESFWVLSKDYTDELTEGKTCIEV 438 L H P P++PS + S+ SGWR GPRP DEPVDLSGDGGV+K V+R G+GY Q++PPPH+YCK+AFVMKTSTGQ+IA+RMK PMEFMLGL PEVI GWE+AVA+MKPNEVAEITCSP+YAFG+AEGY+DKIPPGA I+TRL+L++WR+L+GAGST+VEDTRDLTKKWREEID+GTSPMT WAAPPT + S G+ V N GPLA+ XXXXXXXXXXXXXXXX FSP S+PRVEA+PED NKGMKVD+DD +++ KLN NQVVIGTAPQYKWKERAG++E+VVPVPEEVKKEDVLVHLTNRVL VGFKTPE KE W++GGDLFGPIEL SFWVLSKDYTDELTEGKTC+EV Sbjct: 76 LVHSPPSPFIPS----PIMSAMNSGWRSGPRPSDEPVDLSGDGGVLKTVLRPGYGYNQQTPPPHSYCKVAFVMKTSTGQLIANRMKKPMEFMLGLANPEVIRGWEMAVATMKPNEVAEITCSPEYAFGSAEGYQDKIPPGAIIVTRLQLLNWRTLQGAGSTDVEDTRDLTKKWREEIDEGTSPMTTWAAPPTVRKDSIGEATAEVNR-ENGGGSGPLAEXXXXXXXXXXXXXXXXXXGIDG--------FSPPSTPRVEAIPEDANKGMKVDIDDMAMKNKLNPNQVVIGTAPQYKWKERAGYMEVVVPVPEEVKKEDVLVHLTNRVLTVGFKTPE--NKESWIIGGDLFGPIELDSSFWVLSKDYTDELTEGKTCVEV 439
BLAST of NO06G01340 vs. NCBI_GenBank
Match: CBN78140.1 (peptidylprolyl isomerase-like protein [Ectocarpus siliculosus]) HSP 1 Score: 132.5 bits (332), Expect = 3.300e-27 Identity = 112/388 (28.87%), Postives = 166/388 (42.78%), Query Frame = 0 Query: 93 EPVDLSGD-GGVMKRVIRHGFGYKQESPPPHAYCKIAFVMKTSTGQVIADRMKD---PMEFMLGLEQPEVIPGWELAVASMKPNEVAEITCSPDYAFGAAEGYEDKIPPGATIITRLRLVDWRSLK---GAGSTNVEDTRDLTKKWREEIDQGTSPMTEWAAPPTTKGRSGGKEGGRVEEGANVSSGGPLADAQXXXXXXXXXXXXXXXXXXXXXXXXXDKEFSPMSSPRVEAMPEDL-NKGMKVDVDDPSVQQKLNKNQVVIGTAPQYKWKERAGFLELVVPVPEEVKKEDVLVHL-TNRVLMVGFKTPEKKEKEQWVVGGDLFGPIELAESFWVLSK------------DYTDELTE-----GKTCIEVRLEKKEPMKRIWSTVFK 455 E DLSG G +KRV GF +PP + K+ + MK G+ IA +D P EF LG E GW+ A+++M EVA + C P YAFGAA G +IPP AT+ TRL L DW L A VE +L ++W E++ GTSPM + E G N K+ S + A PE+ ++G K+ + +++ Q V G P + + ERA +L+L +PVP + +DV V + +R+L+V T V G G + L W++S DE+ + G+TC++V LEK++P +W V++ Sbjct: 215 EFADLSGGRGSCLKRVDEDGF-ETDGNPPKGSKIKVHYKMKVVDGENIASSGEDRTKPFEFRLGRWPSEATHGWDKAISAMHRGEVATLICGPQYAFGAA-GAPPRIPPNATVETRLELEDWLDLAAEYNAVPGKVETDEELRERWSEDLADGTSPMKD-------------------EAGLN-------------------------------------KKLQAEMSAKASATPENTDHRGKKIYDLESKEAREIMAKQKVQGYTPDFGYVERANYLDLYIPVPAGTRAKDVTVEIHPDRMLVVVKGTGV-------VTQGHFQGKVALDGCHWLMSDLSLDPPGSTALGTQDDEVRQGPVYRGETCVQVFLEKRKPFDTLWENVYR 537
BLAST of NO06G01340 vs. NCBI_GenBank
Match: PIN03919.1 (FKBP-type peptidyl-prolyl cis-trans isomerase [Handroanthus impetiginosus]) HSP 1 Score: 92.4 bits (228), Expect = 3.800e-15 Identity = 52/137 (37.96%), Postives = 76/137 (55.47%), Query Frame = 0 Query: 93 EPVDLSGDGGVMKRVIRHGFGYKQESPPPHAYCKIAFV----MKTSTGQVIADRMKDPMEFMLGLEQPEVIPGWELAVASMKPNEVAEITCSPDYAFGAAEGYEDKIPPGATIITRLRLVDWRSLKGAGSTNVEDTR 226 +P+DL+GDGGV+K ++R K ++ P + V + TG+V +D F L Q VI W++AV +MK E A+ITC P+YA+G+A G IPP AT+I + LV R KG+ ++V D R Sbjct: 3 DPIDLTGDGGVLKTIVRRA---KPDAMAPSESLPLVDVHYEGILAETGEVFDTTHEDNTIFTFELGQGSVIKAWDIAVKTMKVGEAAKITCKPEYAYGSA-GSPPDIPPDATLIFEVELVACRPRKGSSLSSVSDER 135
BLAST of NO06G01340 vs. NCBI_GenBank
Match: XP_010922289.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-1 [Elaeis guineensis]) HSP 1 Score: 91.3 bits (225), Expect = 8.500e-15 Identity = 55/138 (39.86%), Postives = 75/138 (54.35%), Query Frame = 0 Query: 92 DEPVDLSGDGGVMKRVIRHGFGYKQESPPPHAYCKIAFV----MKTSTGQVIADRMKDPMEFMLGLEQPEVIPGWELAVASMKPNEVAEITCSPDYAFGAAEGYEDKIPPGATIITRLRLVDWRSLKGAGSTNVEDTR 226 D+ VDL+GDGGV+K VIR + ++ P + V TG+V +D F L + VI W++AV +MK EVA+ITC PDYA+G+A G IPP AT+I + LV R KGA +V D + Sbjct: 2 DDAVDLTGDGGVVKSVIRKA---RADASAPSDNLSLVDVHYEGTLADTGEVFDTTHEDNTVFSFELGKGSVIKAWDIAVRTMKVGEVAKITCKPDYAYGSA-GSPPDIPPNATLIFEVELVACRPRKGASLGSVSDEK 135
BLAST of NO06G01340 vs. NCBI_GenBank
Match: XP_006379603.2 (peptidyl-prolyl cis-trans isomerase FKBP20-1 [Populus trichocarpa] >PNT22975.1 hypothetical protein POPTR_008G057900v3 [Populus trichocarpa]) HSP 1 Score: 90.1 bits (222), Expect = 1.900e-14 Identity = 54/137 (39.42%), Postives = 75/137 (54.74%), Query Frame = 0 Query: 93 EPVDLSGDGGVMKRVIRHGFGYKQESPPPHAYCKIAFV----MKTSTGQVIADRMKDPMEFMLGLEQPEVIPGWELAVASMKPNEVAEITCSPDYAFGAAEGYEDKIPPGATIITRLRLVDWRSLKGAGSTNVEDTR 226 + +DLSGDGGV K ++R G K ++ P + V M TG+V +D F L + VI WE+AV +MK EVA+ITC P+YA+G+A G IP AT+I + LV R KG+ T+V + R Sbjct: 3 DSIDLSGDGGVFKSILRKG---KADAICPSEDLPLVDVQYEGMLAETGEVFDTTREDNTVFSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSA-GSPPDIPTDATLIFEVELVACRPRKGSSVTDVSEER 135
BLAST of NO06G01340 vs. NCBI_GenBank
Match: XP_008785564.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-1 [Phoenix dactylifera] >XP_008785565.1 PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-1 [Phoenix dactylifera] >XP_008785566.1 PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-1 [Phoenix dactylifera] >XP_008785567.1 PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-1 [Phoenix dactylifera] >XP_017697526.1 PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-1 [Phoenix dactylifera]) HSP 1 Score: 89.4 bits (220), Expect = 3.200e-14 Identity = 53/138 (38.41%), Postives = 75/138 (54.35%), Query Frame = 0 Query: 92 DEPVDLSGDGGVMKRVIRHGFGYKQESPPPHAYCKIAFV----MKTSTGQVIADRMKDPMEFMLGLEQPEVIPGWELAVASMKPNEVAEITCSPDYAFGAAEGYEDKIPPGATIITRLRLVDWRSLKGAGSTNVEDTR 226 D+ VDL+GDGGV+KRVIR + ++ P + V TG++ +D F L + VI W++A+ +MK EVA+I C PDYA+G+A G IPP AT+I + LV R KGA +V D + Sbjct: 2 DDAVDLTGDGGVVKRVIRKA---RDDAIAPSENLSLVDVHYEGTLADTGEIFDTTHEDNTIFSFELGKGSVIKAWDIAMRTMKVGEVAKIICKPDYAYGSA-GSPPDIPPNATLIFEVELVACRPRKGASLGSVSDEK 135
BLAST of NO06G01340 vs. NCBI_GenBank
Match: PIA60389.1 (hypothetical protein AQUCO_00300110v1 [Aquilegia coerulea]) HSP 1 Score: 89.4 bits (220), Expect = 3.200e-14 Identity = 49/137 (35.77%), Postives = 76/137 (55.47%), Query Frame = 0 Query: 93 EPVDLSGDGGVMKRVIRHGFGYKQESPPPHAYCKIAFV----MKTSTGQVIADRMKDPMEFMLGLEQPEVIPGWELAVASMKPNEVAEITCSPDYAFGAAEGYEDKIPPGATIITRLRLVDWRSLKGAGSTNVEDTR 226 + +DL+GDGGVMK+++R K ++ P I V TG+V +D F L + VI W++A+ +MK EVA+ITC PDYA+G+A G +IPP AT++ + LV R +G+ ++ D + Sbjct: 3 DAIDLTGDGGVMKKIVRRA---KADAVGPTENVPIVDVHYEGTLAETGEVFDSTHEDNTVFSFELGKGTVIKSWDIALRTMKVGEVAQITCKPDYAYGSA-GSPPEIPPDATLVFEIELVTCRPRRGSSLSSASDEK 135
BLAST of NO06G01340 vs. NCBI_GenBank
Match: XP_005703171.1 (FK506-binding protein 4/5 [Galdieria sulphuraria] >EME26651.1 FK506-binding protein 4/5 [Galdieria sulphuraria]) HSP 1 Score: 88.6 bits (218), Expect = 5.500e-14 Identity = 48/122 (39.34%), Postives = 72/122 (59.02%), Query Frame = 0 Query: 96 DLSGDGGVMKRVIRHGFGYKQESPPPHAYCKIAFVMKTSTGQVIADRMKD---PMEFMLGLEQPEVIPGWELAVASMKPNEVAEITCSPDYAFGAAEGYEDKIPPGATIITRLRLVDWRSLK 215 DL+GDGGV K +++ G GYK+ P ++ ++ K + + D D P++F LG Q VI GW++AVA+MK E A++T P+Y +G G KIP AT++ + LVDW S+K Sbjct: 33 DLTGDGGVEKVILKQGEGYKR--PEKGDEVRVNYIGKLLGSEDVFDNSYDRGEPLKFTLGSGQ--VIKGWDVAVATMKKGEKAKVTIKPEYGYG-ENGMPPKIPENATLVFEMELVDWTSVK 149
BLAST of NO06G01340 vs. NCBI_GenBank
Match: XP_020583744.1 (peptidyl-prolyl cis-trans isomerase FKBP20-1 [Phalaenopsis equestris] >XP_020583825.1 peptidyl-prolyl cis-trans isomerase FKBP20-1 [Phalaenopsis equestris]) HSP 1 Score: 88.6 bits (218), Expect = 5.500e-14 Identity = 51/135 (37.78%), Postives = 74/135 (54.81%), Query Frame = 0 Query: 93 EPVDLSGDGGVMKRVIRHGFGYKQESPPPHAYCKIAFV----MKTSTGQVIADRMKDPMEFMLGLEQPEVIPGWELAVASMKPNEVAEITCSPDYAFGAAEGYEDKIPPGATIITRLRLVDWRSLKGAGSTNVED 224 E +DL+GDGGV+K +I+ K + P + V + TG+V +D F L VI W++A+ +MK E+A+ITC P+YA+G+A G +IPPGAT+I + LV R +KGA V D Sbjct: 3 EVIDLTGDGGVLKTIIQRA---KPNATGPTESLPVVDVRYEGVLAETGEVFDTTREDNTIFTFELGAGTVIKSWDIALRTMKIGEIAKITCKPEYAYGSA-GSPPEIPPGATLIFEVELVACRPIKGASIGGVSD 133 The following BLAST results are available for this feature:
BLAST of NO06G01340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G01340 ID=NO06G01340|Name=NO06G01340|organism=Nannochloropsis oceanica|type=gene|length=1666bpback to top protein sequence of NO06G01340.1 >NO06G01340.1-protein ID=NO06G01340.1-protein|Name=NO06G01340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=457bpback to top Synonyms
Publications
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