NO06G01330, NO06G01330 (gene) Nannochloropsis oceanica

Overview
NameNO06G01330
Unique NameNO06G01330
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1108
Alignment locationchr6:429358..430465 -

Link to JBrowse

Properties
Property NameValue
DescriptionEukaryotic translation initiation factor 3 subunit G
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:429358..430465 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005852eukaryotic translation initiation factor 3 complex
GO:0005737cytoplasm
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
GO:0003676nucleic acid binding
GO:0003723RNA binding
Vocabulary: INTERPRO
TermDefinition
IPR035979RBD_domain_sf
IPR017334eIF3_g
IPR024675eIF3g_N
IPR000504RRM_dom
Homology
BLAST of NO06G01330 vs. NCBI_GenBank
Match: XP_002907862.1 (eukaryotic translation initiation factor 3 subunit G, putative [Phytophthora infestans T30-4] >EEY60945.1 eukaryotic translation initiation factor 3 subunit G, putative [Phytophthora infestans T30-4])

HSP 1 Score: 152.9 bits (385), Expect = 1.700e-33
Identity = 113/316 (35.76%), Postives = 151/316 (47.78%), Query Frame = 0
Query:    8 WGDYEDDEELPQAVESGPDQNGVVTRTHWDWKD-GRKVRYVQKFRVEEVRTRVPKRTFERKTWARFGDACDAH-----VRAEEQSIAIEDPNS--------LAEEEPAADIKNLGLI----------RQKLEARKKGLLPSSAPGDSYAEYQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDKFPTLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGLSSGFVSGYGQRLAQD 300
            WGD E+D+ LPQ VES PD  GV     W   + G KV+  +K +      R+ KR  ERK WA+FGDA D            + + +EDPN+          EE   A +KN  ++             L+   K         D     ++G        XX                                 XXX   +D   TLRVTNVS DT +DDLK+LF  FG + RV+LAKD+E   SRGFAFVSF+ + DA++A+++LQGYGYDHLIL+LEWA P     +   +  G + + F SGYG+ L Q+
Sbjct:    8 WGD-EEDDLLPQRVESEPDSKGVRQIVEWKVNEAGDKVKVTKKVKKVTEVERISKRALERKKWAKFGDALDDGDGSNVTYMPHEEVTLEDPNADQVLPGEKKEEENIFAGVKNSSIVVCRHCGMVGDHWTLKCPYKDTPKEELEQDMAKRAESGEAAAPAAAXXEPAARGSALDGAFGSSKYVPPSLRGRASAGGDAXXXNSRDDS-ATLRVTNVSPDTREDDLKELFRAFGPVARVYLAKDRETFQSRGFAFVSFMYREDAEKALNKLQGYGYDHLILKLEWAKP---SNKPANDDAGSMGTTFRSGYGKALPQN 318          
BLAST of NO06G01330 vs. NCBI_GenBank
Match: CCA18143.1 (eukaryotic translation initiation factor 3 subunit G putative [Albugo laibachii Nc14])

HSP 1 Score: 152.5 bits (384), Expect = 2.200e-33
Identity = 112/315 (35.56%), Postives = 156/315 (49.52%), Query Frame = 0
Query:    8 WGDYEDDEELPQAVESGPDQNGVVTRTHWDWKD-GRKVRYVQKF-RVEEVRTRVPKRTFERKTWARFGDAC---DAHVR-AEEQSIAIEDPNS--------LAEEEPAADIKNLGLIRQKLEARKKGLL----------PSSAPGDSYAEYQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDKFPTLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGLSSGFVSGYGQRLAQ 299
            WGD EDD+ LP   ES  D+NGV T   W + + G+KV+  +K  RVEE+  R+ KR  ERK W +FG A    D++V     +++ +EDP++          EE   A +K   +I      R  G++            +  G+     ++G                                                E+ +  TLRVTN+S DT +DDL +LF  FG + RV+LA+D+E   SRGFAFVSF    DA+RA+++LQGYGYDHLIL+LEWA P  + REE      G+S+ F SGYG+ L Q
Sbjct:    8 WGD-EDDDFLPARTESDVDKNGVRTIVEWKFNELGQKVKITKKVQRVEEIH-RISKRVLERKNWKKFGAALQGDDSNVTYPSNETVLMEDPSADQILPGEKREEESVFAGVKGASII----TCRHCGVVGDHWTLKCPYKDTPAGEIPTGIKSGADEATNNDADATEENTGSSLSRAFGGGPDKYVPPNLRNRGDDKGESYAEDTENATLRVTNISPDTCEDDLYELFRVFGHVLRVYLARDRETMQSRGFAFVSFARADDAERALNKLQGYGYDHLILKLEWARPSNKPREED----RGMSTTFRSGYGKALPQ 312          
BLAST of NO06G01330 vs. NCBI_GenBank
Match: CCI42569.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 151.4 bits (381), Expect = 4.800e-33
Identity = 116/301 (38.54%), Postives = 154/301 (51.16%), Query Frame = 0
Query:    8 WGDYEDDEELPQAVESGPDQNGVVTRTHWDWKD-GRKVRYVQKF-RVEEVRTRVPKRTFERKTWARFGDAC---DAHVR-AEEQSIAIEDPNS--------LAEEEPAADIKNLGLIRQKLEARKKGLL----------PSSAPGDSYAEYQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDKFPTLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGL 285
            WGD EDD+ LP   ES PD+NGV T   W + D G+KV+  +K  RVEE+  R+ KR  ERK W +FG A    D++V     +++ +EDPN+          EE   A +K   +I      R  G++            + PG+      +G         XXXXXXXX                                +    TLRVTN+S DT +DDL +LF  FG + RV+LA+D+E   SRGFAFVSF    DA+RA+D+LQGYGYDHLIL+LEWA P  + REE  + +  L
Sbjct:    8 WGD-EDDDFLPTRTESEPDKNGVRTIVEWKFNDLGQKVKITKKVQRVEEIH-RISKRVLERKNWKKFGAALQGNDSNVTYPSNETVYMEDPNADQILPGEKREEESVFAGVKGASII----TCRHCGIVGDHWTLKCPYKDTPPGEIPTGINSGADEDTKADAXXXXXXXXSSLSRAFGGGPDKYVPPNLRNRGDDKGESYANDTDNATLRVTNISPDTCEDDLYELFRVFGHVLRVYLARDRETLQSRGFAFVSFARVEDAERALDKLQGYGYDHLILKLEWARPSNKPREEDRDAIDAL 302          
BLAST of NO06G01330 vs. NCBI_GenBank
Match: XP_008879456.1 (hypothetical protein H310_13649 [Aphanomyces invadans] >ETV91819.1 hypothetical protein H310_13649 [Aphanomyces invadans])

HSP 1 Score: 148.7 bits (374), Expect = 3.100e-32
Identity = 154/320 (48.12%), Postives = 197/320 (61.56%), Query Frame = 0
Query:    8 WGDYEDDEELPQAVESGPDQNGVVTRTHWDWKDGR-KVRYVQKFRVEEVRTRVPKRTFERKTWARFGDACDAH----VRAEEQSIAIEDPNS--------LAEEEPAADIKNLGLI----------RQKLEARKKGLLPSSAPGDSYAE-----YQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDKFPTLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGLSSGFVSGYGQRLAQD 300
            WGD ED++ LPQ  ES PD NGV T   W + D + KV+   K +  +   ++ KR  ERK+WA+FG+  +           +++ ++DPN+          EE   + +K+  ++             L+   K   P +A  D  AE         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      TLRVTN+S +T +DDLK LF  FG L RV+LAKD+E   SRGFAFVSF  +SDA++A+++LQGYGYDHLIL+LEWA P T+   +     G + + F SGYG+ L QD
Sbjct:    9 WGD-EDEDFLPQRTESEPDANGVRTIVSWKFDDDKNKVKVTTKIQKVQTVHKISKRVIERKSWAKFGEGAEEGNTNVTYLSNETVGMDDPNADQILPGEKKEEESVFSGVKSSSIVVCRHCGMVGDHWTLKCPYKDSAPPTA--DELAENTPPAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRVTNISPETREDDLKDLFRAFGPLERVYLAKDRETFQSRGFAFVSFAYRSDAEKALNKLQGYGYDHLILKLEWAKPSTKTAVDE----GSVGTTFRSGYGKALPQD 321          
BLAST of NO06G01330 vs. NCBI_GenBank
Match: XP_009841676.1 (hypothetical protein H257_15316 [Aphanomyces astaci] >ETV68722.1 hypothetical protein H257_15316 [Aphanomyces astaci])

HSP 1 Score: 147.9 bits (372), Expect = 5.300e-32
Identity = 104/321 (32.40%), Postives = 150/321 (46.73%), Query Frame = 0
Query:    8 WGDYEDDEELPQAVESGPDQNGVVTRTHWDWKDGR-KVRYVQKFRVEEVRTRVPKRTFERKTWARFGDACDAH-----VRAEEQSIAIEDPNS--------LAEEEPAADIKNLGLI----------RQKLEARKKGLLPSSAPGDSYAE-----YQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDKFPTLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGLSSGFVSGYGQRLAQD 300
            WGD ED++ LPQ  E+ PD NGV T   W + D + KV+   K +  +   ++ KR  ERK+W +FG+  +         +  +++ ++DPN+          EE   + +K   ++             L+   K   P +A  D  AE       A                                                  +D   TLRVTN+S +T +DDLK LF  FG L RV+LAKD+E   SRGFAFVSF  + DA++A+++LQG+GYDHLIL+LEWA P T+   +     G + + F SGYG+ L QD
Sbjct:    8 WGD-EDEDFLPQRTETEPDANGVRTIVSWKFDDDKNKVKVTTKIQKVQTVHKISKRVTERKSWGKFGEGLNVEGNTNVTYSSNETVFMDDPNADQILPGEKKEEESVFSGVKQTSIVVCRHCGMVGDHWTLKCPYKDSAPPTA--DELAENTPPTEDARAAPSSSFASAASGGSRLANAFGGTSGKYVPPSQRGGAGAGASDDARQSRDDDSATLRVTNISPETREDDLKDLFRTFGPLERVYLAKDRETFQSRGFAFVSFAYRGDAEKALNKLQGFGYDHLILKLEWAKPSTKTAVDE----GAVGTTFRSGYGKALPQD 321          
BLAST of NO06G01330 vs. NCBI_GenBank
Match: GAX92235.1 (eukaryotic translation initiation factor 3 subunit G, putative [Pythium insidiosum])

HSP 1 Score: 146.7 bits (369), Expect = 1.200e-31
Identity = 116/316 (36.71%), Postives = 155/316 (49.05%), Query Frame = 0
Query:    8 WGDYEDDEELPQAVESGPDQNGVVTRTHWDWKD-GRKVRYVQKFRVEEVRTRVPKRTFERKTWARFGDACDAH----VRAEEQSIAIEDPNS--------LAEEEPAADIKNLGLI----------RQKLEARKKGLLPSSAPGDSYAEYQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDK-FPTLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGLSSGFVSGYGQRLAQD 300
            WGD EDD+ LP   ES PD NGV T   W + + G+KV+                R  ER+ WA+FG A             + + +EDPN+          EE   A +KN  ++             L+   K       P D  +   AG    XXXXXXXXXX                                  ++D+   TLRVTN+S DT +DDLK+LF  FG + RV+LAKD+E   SRGFAFVSF+ + DA+RA+ +LQGYGYDHLIL+LEWA  P+ +   + +  G +S+ F SGYG+ L Q+
Sbjct:    8 WGD-EDDDLLPPRTESEPDANGVRTVVEWKYNEAGQKVKVTXXXXXXXXXXXXXXRMLERRQWAKFGAALHGDSSNVTYTSYEEVTLEDPNADQVLPGEKKEEENIFAGVKNSSIVVCRHCGMVGDHWTLKCPYKDTPIDELPAD-LSTRGAGESDSXXXXXXXXXXGSALDSAFGSGKYVPPSLRNRMGGAAGGESERESQDDRDSATLRVTNISPDTREDDLKELFRAFGPVSRVYLAKDRETFQSRGFAFVSFMYREDAERALQKLQGYGYDHLILKLEWAK-PSNKPANQEQDPGSMSTTFRSGYGKALPQN 320          
BLAST of NO06G01330 vs. NCBI_GenBank
Match: CCI42568.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 143.7 bits (361), Expect = 1.000e-30
Identity = 111/291 (38.14%), Postives = 145/291 (49.83%), Query Frame = 0
Query:    8 WGDYEDDEELPQAVESGPDQNGVVTRTHWDWKD-GRKVRYVQKF-RVEEVRTRVPKRTFERKTWARFGDAC---DAHVRAEEQSIAIEDPNSLA---------EEEPAADIKNLGLIRQKLEARKKGLLPSSAPGDSYAEYQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDKFPTLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGL 285
            WGD EDD+ LP   ES PD+NGV T   W + D G+KV+  +K  RVEE+  R+ KR  ERK W +FG A    D++V        IE  +S           E       ++ G++        K     + PG+      +G         XXXXXXXX                                +    TLRVTN+S DT +DDL +LF  FG + RV+LA+D+E   SRGFAFVSF    DA+RA+D+LQGYGYDHLIL+LEWA P  + REE  + +  L
Sbjct:    8 WGD-EDDDFLPTRTESEPDKNGVRTIVEWKFNDLGQKVKITKKVQRVEEIH-RISKRVLERKNWKKFGAALQGNDSNVTYPSNETVIEIVSSHGTVDMMCLSFEGASIITCRHCGIVGDHWTL--KCPYKDTPPGEIPTGINSGADEDTKADAXXXXXXXXSSLSRAFGGGPDKYVPPNLRNRGDDKGESYANDTDNATLRVTNISPDTCEDDLYELFRVFGHVLRVYLARDRETLQSRGFAFVSFARVEDAERALDKLQGYGYDHLILKLEWARPSNKPREEDRDAIDAL 294          
BLAST of NO06G01330 vs. NCBI_GenBank
Match: OQR93083.1 (eukaryotic translation initiation factor 3 subunit G [Achlya hypogyna])

HSP 1 Score: 141.4 bits (355), Expect = 5.000e-30
Identity = 104/317 (32.81%), Postives = 147/317 (46.37%), Query Frame = 0
Query:    8 WGDYEDDEELPQAVESGPDQNGVVTRTHWDW-KDGRKVRYVQKFRVEEVRTRVPKRTFERKTWARFGDACDAHVRAEEQSIAIEDPNSLAEEEPAAD-------------IKNLGLIRQKLEARKKGLL-----------PSSAPGDSYAEYQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDKFPTLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGLSSGFVSGYGQRLAQD 300
            WGD E D+ LP   E+   +NG+ T   W    D  KV+   K +     TRV KR  ERK+WA+FG+A +     +  ++    P ++  E+P AD             + N+G     +  R  G++            S AP +  ++                                                    ++D   TLRVTNVS +T +DDLK+LF  FG L RV+LAKD+E   SRGFAFVSF+ + DA++AM++LQGYGYDHLIL+LEWA P  +   +     G   + F SGYG+ L Q+
Sbjct:    9 WGDDEIDDVLPPRTET--VENGIKTVVSWKLDADNNKVKVTTKSKKVTSTTRVSKRVIERKSWAKFGEALE-----DNSNVTYTPPEAVYMEDPTADQVIPGEDKDAKSVLDNIGK-ASIVVCRHCGMVGDHWTLKCPYKDSPAPLEDMSDMPRDDEETPAPAAAAAPTRALSFAHAAGGKYVPPSMRGASSSAADDVRQPVQDKDS-ATLRVTNVSPETREDDLKELFRVFGPLERVYLAKDRETFQSRGFAFVSFVYREDAEKAMNKLQGYGYDHLILKLEWAKPSNKAPTDE----GAQGTTFRSGYGKALPQN 312          
BLAST of NO06G01330 vs. NCBI_GenBank
Match: XP_009037349.1 (hypothetical protein AURANDRAFT_71733 [Aureococcus anophagefferens] >EGB07983.1 hypothetical protein AURANDRAFT_71733 [Aureococcus anophagefferens])

HSP 1 Score: 138.7 bits (348), Expect = 3.200e-29
Identity = 68/120 (56.67%), Postives = 87/120 (72.50%), Query Frame = 0
Query:  192 TLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGLSSGFVSGYGQRLAQDTTLNYSTASNLT 312
            +LRVTN+SEDT + DL+ LF  +G + R++LAKD+E   SRGFAFVS++ + DA+RAM  LQG+GYDHLIL++EWA P   + +      GGLS GF SGYG+ LAQDT    S ASNLT
Sbjct:  584 SLRVTNISEDTCEADLQVLFAPYGRIARIYLAKDRETMVSRGFAFVSYIHRQDAERAMAALQGHGYDHLILKIEWAKPSVPKPDAE----GGLSGGFTSGYGKALAQDTKERVSYASNLT 699          
BLAST of NO06G01330 vs. NCBI_GenBank
Match: EJK47313.1 (hypothetical protein THAOC_33975 [Thalassiosira oceanica])

HSP 1 Score: 136.7 bits (343), Expect = 1.200e-28
Identity = 72/125 (57.60%), Postives = 85/125 (68.00%), Query Frame = 0
Query:  192 TLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGLSSGFVSGYGQRLAQDTTLNYSTASNLTHGTER 317
            TLRVTN+SE+    DL+ LF  FG + RV+LAKDKE   SRGFAFVSF+ + DA RAMD+LQG+GYDHLIL+LEWA P   +        G   + F SGYG+ LAQDT    S ASNLT GT R
Sbjct:  266 TLRVTNISEEAXXXDLQDLFSPFGRISRVYLAKDKETMQSRGFAFVSFVHREDAARAMDKLQGHGYDHLILKLEWARPSAPKDP------GSSGTQFRSGYGKALAQDTKEKVSFASNLTTGTGR 384          
The following BLAST results are available for this feature:
BLAST of NO06G01330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_002907862.11.700e-3335.76eukaryotic translation initiation factor 3 subunit... [more]
CCA18143.12.200e-3335.56eukaryotic translation initiation factor 3 subunit... [more]
CCI42569.14.800e-3338.54unnamed protein product [Albugo candida][more]
XP_008879456.13.100e-3248.13hypothetical protein H310_13649 [Aphanomyces invad... [more]
XP_009841676.15.300e-3232.40hypothetical protein H257_15316 [Aphanomyces astac... [more]
GAX92235.11.200e-3136.71eukaryotic translation initiation factor 3 subunit... [more]
CCI42568.11.000e-3038.14unnamed protein product [Albugo candida][more]
OQR93083.15.000e-3032.81eukaryotic translation initiation factor 3 subunit... [more]
XP_009037349.13.200e-2956.67hypothetical protein AURANDRAFT_71733 [Aureococcus... [more]
EJK47313.11.200e-2857.60hypothetical protein THAOC_33975 [Thalassiosira oc... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL089nonsL089Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR145ngnoR145Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000320NSK000320Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G01330.1NO06G01330.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100121g8gene4358Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G01330.1NO06G01330.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G01330 ID=NO06G01330|Name=NO06G01330|organism=Nannochloropsis oceanica|type=gene|length=1108bp
ATGTCTCGCGACATGAAGGACTGGGGGGATTACGAGGATGATGAGGAGCT
CCCGCAAGCAGTGGAGgtaagtcttgtgtttgttgcttgtgggaaaagga
agggtgggtggcaaaatattgagagacttggatggcgttgaaatgaggtc
ctgcctttacctcgcatgaacacctccttcctcctttcccccccaacttc
ttctcccactacacacacgatagAGCGGCCCTGATCAGAATGGGGTGGTG
ACACGGACGCACTGGGACTGGAAGGACGGCCGCAAGGTCCGCTACGTCCA
GAAATTTCGAGTGGAGGAGGTCAGGACCCGCGTGCCCAAGCGAACCTTCG
AACGCAAGACCTGGGCCCGGTTCGGAGACGCATGTGATGCCCATGTTCGC
GCAGAGGAACAGAGCATTGCGATTGAGGACCCGAATAGTCTAGCGGAGGA
AGAGCCGGCAGCGGACATTAAAAATTTGGGGTTGATTCGACAGAAGCTCG
AGGCCCGAAAGAAGGGCTTGTTACCGTCGTCGGCGCCAGGGGATTCCTAC
GCCGAATATCAGGCAGGGGGAGGGGGAGGGATGGGGGTAGGCGGGGAGGA
GGGGGGGATGCGAGGCGGAATGATGGGCGGGGGTACGGGAAGGACTATGG
GGGAGAGGTTTGGTGCGGGTGGAGGGGGAGGGCCGGGGCCTCAGGGTGGA
CCTGGGGGGAGGGAGGAAGACAAGTTCCCTACACTTCGTGTGACGAATGT
ATCGGAGGACACGACGGACGATGATTTGAAGCAGTTGTTTGGGCGGTTTG
GGTCATTGCATCGTGTGTTCCTTGCCAAGGATAAGGAACGAAATACCAGC
CGGGGGTTTGCGTTTGTCTCTTTCCTCAGTAAGAGCGATGCCCAGAGGGC
CATGGATGAGTTACAGGGGTACGGGTACGATCACTTGATTCTTCGGTTGG
AGTGGGCCAATCCCCCGACGCAGAGGAGGGAGGAGAGGGGAGAGGGCTTG
GGGGGGCTGTCGTCAGGGTTTGTATCCGGGTACGGGCAGAGGCTTGCGCA
GGATACGACGTTGAATTACTCAACGGCCTCGAATCTAACGCATGGGACAG
AGAGATAA
back to top

protein sequence of NO06G01330.1

>NO06G01330.1-protein ID=NO06G01330.1-protein|Name=NO06G01330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=317bp
MSRDMKDWGDYEDDEELPQAVESGPDQNGVVTRTHWDWKDGRKVRYVQKF
RVEEVRTRVPKRTFERKTWARFGDACDAHVRAEEQSIAIEDPNSLAEEEP
AADIKNLGLIRQKLEARKKGLLPSSAPGDSYAEYQAGGGGGMGVGGEEGG
MRGGMMGGGTGRTMGERFGAGGGGGPGPQGGPGGREEDKFPTLRVTNVSE
DTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMD
ELQGYGYDHLILRLEWANPPTQRREERGEGLGGLSSGFVSGYGQRLAQDT
TLNYSTASNLTHGTER*
back to top
Synonyms
Publications