NO06G01330, NO06G01330 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G01330 vs. NCBI_GenBank
Match: XP_002907862.1 (eukaryotic translation initiation factor 3 subunit G, putative [Phytophthora infestans T30-4] >EEY60945.1 eukaryotic translation initiation factor 3 subunit G, putative [Phytophthora infestans T30-4]) HSP 1 Score: 152.9 bits (385), Expect = 1.700e-33 Identity = 113/316 (35.76%), Postives = 151/316 (47.78%), Query Frame = 0 Query: 8 WGDYEDDEELPQAVESGPDQNGVVTRTHWDWKD-GRKVRYVQKFRVEEVRTRVPKRTFERKTWARFGDACDAH-----VRAEEQSIAIEDPNS--------LAEEEPAADIKNLGLI----------RQKLEARKKGLLPSSAPGDSYAEYQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDKFPTLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGLSSGFVSGYGQRLAQD 300 WGD E+D+ LPQ VES PD GV W + G KV+ +K + R+ KR ERK WA+FGDA D + + +EDPN+ EE A +KN ++ L+ K D ++G XX XXX +D TLRVTNVS DT +DDLK+LF FG + RV+LAKD+E SRGFAFVSF+ + DA++A+++LQGYGYDHLIL+LEWA P + + G + + F SGYG+ L Q+ Sbjct: 8 WGD-EEDDLLPQRVESEPDSKGVRQIVEWKVNEAGDKVKVTKKVKKVTEVERISKRALERKKWAKFGDALDDGDGSNVTYMPHEEVTLEDPNADQVLPGEKKEEENIFAGVKNSSIVVCRHCGMVGDHWTLKCPYKDTPKEELEQDMAKRAESGEAAAPAAAXXEPAARGSALDGAFGSSKYVPPSLRGRASAGGDAXXXNSRDDS-ATLRVTNVSPDTREDDLKELFRAFGPVARVYLAKDRETFQSRGFAFVSFMYREDAEKALNKLQGYGYDHLILKLEWAKP---SNKPANDDAGSMGTTFRSGYGKALPQN 318
BLAST of NO06G01330 vs. NCBI_GenBank
Match: CCA18143.1 (eukaryotic translation initiation factor 3 subunit G putative [Albugo laibachii Nc14]) HSP 1 Score: 152.5 bits (384), Expect = 2.200e-33 Identity = 112/315 (35.56%), Postives = 156/315 (49.52%), Query Frame = 0 Query: 8 WGDYEDDEELPQAVESGPDQNGVVTRTHWDWKD-GRKVRYVQKF-RVEEVRTRVPKRTFERKTWARFGDAC---DAHVR-AEEQSIAIEDPNS--------LAEEEPAADIKNLGLIRQKLEARKKGLL----------PSSAPGDSYAEYQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDKFPTLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGLSSGFVSGYGQRLAQ 299 WGD EDD+ LP ES D+NGV T W + + G+KV+ +K RVEE+ R+ KR ERK W +FG A D++V +++ +EDP++ EE A +K +I R G++ + G+ ++G E+ + TLRVTN+S DT +DDL +LF FG + RV+LA+D+E SRGFAFVSF DA+RA+++LQGYGYDHLIL+LEWA P + REE G+S+ F SGYG+ L Q Sbjct: 8 WGD-EDDDFLPARTESDVDKNGVRTIVEWKFNELGQKVKITKKVQRVEEIH-RISKRVLERKNWKKFGAALQGDDSNVTYPSNETVLMEDPSADQILPGEKREEESVFAGVKGASII----TCRHCGVVGDHWTLKCPYKDTPAGEIPTGIKSGADEATNNDADATEENTGSSLSRAFGGGPDKYVPPNLRNRGDDKGESYAEDTENATLRVTNISPDTCEDDLYELFRVFGHVLRVYLARDRETMQSRGFAFVSFARADDAERALNKLQGYGYDHLILKLEWARPSNKPREED----RGMSTTFRSGYGKALPQ 312
BLAST of NO06G01330 vs. NCBI_GenBank
Match: CCI42569.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 151.4 bits (381), Expect = 4.800e-33 Identity = 116/301 (38.54%), Postives = 154/301 (51.16%), Query Frame = 0 Query: 8 WGDYEDDEELPQAVESGPDQNGVVTRTHWDWKD-GRKVRYVQKF-RVEEVRTRVPKRTFERKTWARFGDAC---DAHVR-AEEQSIAIEDPNS--------LAEEEPAADIKNLGLIRQKLEARKKGLL----------PSSAPGDSYAEYQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDKFPTLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGL 285 WGD EDD+ LP ES PD+NGV T W + D G+KV+ +K RVEE+ R+ KR ERK W +FG A D++V +++ +EDPN+ EE A +K +I R G++ + PG+ +G XXXXXXXX + TLRVTN+S DT +DDL +LF FG + RV+LA+D+E SRGFAFVSF DA+RA+D+LQGYGYDHLIL+LEWA P + REE + + L Sbjct: 8 WGD-EDDDFLPTRTESEPDKNGVRTIVEWKFNDLGQKVKITKKVQRVEEIH-RISKRVLERKNWKKFGAALQGNDSNVTYPSNETVYMEDPNADQILPGEKREEESVFAGVKGASII----TCRHCGIVGDHWTLKCPYKDTPPGEIPTGINSGADEDTKADAXXXXXXXXSSLSRAFGGGPDKYVPPNLRNRGDDKGESYANDTDNATLRVTNISPDTCEDDLYELFRVFGHVLRVYLARDRETLQSRGFAFVSFARVEDAERALDKLQGYGYDHLILKLEWARPSNKPREEDRDAIDAL 302
BLAST of NO06G01330 vs. NCBI_GenBank
Match: XP_008879456.1 (hypothetical protein H310_13649 [Aphanomyces invadans] >ETV91819.1 hypothetical protein H310_13649 [Aphanomyces invadans]) HSP 1 Score: 148.7 bits (374), Expect = 3.100e-32 Identity = 154/320 (48.12%), Postives = 197/320 (61.56%), Query Frame = 0 Query: 8 WGDYEDDEELPQAVESGPDQNGVVTRTHWDWKDGR-KVRYVQKFRVEEVRTRVPKRTFERKTWARFGDACDAH----VRAEEQSIAIEDPNS--------LAEEEPAADIKNLGLI----------RQKLEARKKGLLPSSAPGDSYAE-----YQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDKFPTLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGLSSGFVSGYGQRLAQD 300 WGD ED++ LPQ ES PD NGV T W + D + KV+ K + + ++ KR ERK+WA+FG+ + +++ ++DPN+ EE + +K+ ++ L+ K P +A D AE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TLRVTN+S +T +DDLK LF FG L RV+LAKD+E SRGFAFVSF +SDA++A+++LQGYGYDHLIL+LEWA P T+ + G + + F SGYG+ L QD Sbjct: 9 WGD-EDEDFLPQRTESEPDANGVRTIVSWKFDDDKNKVKVTTKIQKVQTVHKISKRVIERKSWAKFGEGAEEGNTNVTYLSNETVGMDDPNADQILPGEKKEEESVFSGVKSSSIVVCRHCGMVGDHWTLKCPYKDSAPPTA--DELAENTPPAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRVTNISPETREDDLKDLFRAFGPLERVYLAKDRETFQSRGFAFVSFAYRSDAEKALNKLQGYGYDHLILKLEWAKPSTKTAVDE----GSVGTTFRSGYGKALPQD 321
BLAST of NO06G01330 vs. NCBI_GenBank
Match: XP_009841676.1 (hypothetical protein H257_15316 [Aphanomyces astaci] >ETV68722.1 hypothetical protein H257_15316 [Aphanomyces astaci]) HSP 1 Score: 147.9 bits (372), Expect = 5.300e-32 Identity = 104/321 (32.40%), Postives = 150/321 (46.73%), Query Frame = 0 Query: 8 WGDYEDDEELPQAVESGPDQNGVVTRTHWDWKDGR-KVRYVQKFRVEEVRTRVPKRTFERKTWARFGDACDAH-----VRAEEQSIAIEDPNS--------LAEEEPAADIKNLGLI----------RQKLEARKKGLLPSSAPGDSYAE-----YQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDKFPTLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGLSSGFVSGYGQRLAQD 300 WGD ED++ LPQ E+ PD NGV T W + D + KV+ K + + ++ KR ERK+W +FG+ + + +++ ++DPN+ EE + +K ++ L+ K P +A D AE A +D TLRVTN+S +T +DDLK LF FG L RV+LAKD+E SRGFAFVSF + DA++A+++LQG+GYDHLIL+LEWA P T+ + G + + F SGYG+ L QD Sbjct: 8 WGD-EDEDFLPQRTETEPDANGVRTIVSWKFDDDKNKVKVTTKIQKVQTVHKISKRVTERKSWGKFGEGLNVEGNTNVTYSSNETVFMDDPNADQILPGEKKEEESVFSGVKQTSIVVCRHCGMVGDHWTLKCPYKDSAPPTA--DELAENTPPTEDARAAPSSSFASAASGGSRLANAFGGTSGKYVPPSQRGGAGAGASDDARQSRDDDSATLRVTNISPETREDDLKDLFRTFGPLERVYLAKDRETFQSRGFAFVSFAYRGDAEKALNKLQGFGYDHLILKLEWAKPSTKTAVDE----GAVGTTFRSGYGKALPQD 321
BLAST of NO06G01330 vs. NCBI_GenBank
Match: GAX92235.1 (eukaryotic translation initiation factor 3 subunit G, putative [Pythium insidiosum]) HSP 1 Score: 146.7 bits (369), Expect = 1.200e-31 Identity = 116/316 (36.71%), Postives = 155/316 (49.05%), Query Frame = 0 Query: 8 WGDYEDDEELPQAVESGPDQNGVVTRTHWDWKD-GRKVRYVQKFRVEEVRTRVPKRTFERKTWARFGDACDAH----VRAEEQSIAIEDPNS--------LAEEEPAADIKNLGLI----------RQKLEARKKGLLPSSAPGDSYAEYQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDK-FPTLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGLSSGFVSGYGQRLAQD 300 WGD EDD+ LP ES PD NGV T W + + G+KV+ R ER+ WA+FG A + + +EDPN+ EE A +KN ++ L+ K P D + AG XXXXXXXXXX ++D+ TLRVTN+S DT +DDLK+LF FG + RV+LAKD+E SRGFAFVSF+ + DA+RA+ +LQGYGYDHLIL+LEWA P+ + + + G +S+ F SGYG+ L Q+ Sbjct: 8 WGD-EDDDLLPPRTESEPDANGVRTVVEWKYNEAGQKVKVTXXXXXXXXXXXXXXRMLERRQWAKFGAALHGDSSNVTYTSYEEVTLEDPNADQVLPGEKKEEENIFAGVKNSSIVVCRHCGMVGDHWTLKCPYKDTPIDELPAD-LSTRGAGESDSXXXXXXXXXXGSALDSAFGSGKYVPPSLRNRMGGAAGGESERESQDDRDSATLRVTNISPDTREDDLKELFRAFGPVSRVYLAKDRETFQSRGFAFVSFMYREDAERALQKLQGYGYDHLILKLEWAK-PSNKPANQEQDPGSMSTTFRSGYGKALPQN 320
BLAST of NO06G01330 vs. NCBI_GenBank
Match: CCI42568.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 143.7 bits (361), Expect = 1.000e-30 Identity = 111/291 (38.14%), Postives = 145/291 (49.83%), Query Frame = 0 Query: 8 WGDYEDDEELPQAVESGPDQNGVVTRTHWDWKD-GRKVRYVQKF-RVEEVRTRVPKRTFERKTWARFGDAC---DAHVRAEEQSIAIEDPNSLA---------EEEPAADIKNLGLIRQKLEARKKGLLPSSAPGDSYAEYQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDKFPTLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGL 285 WGD EDD+ LP ES PD+NGV T W + D G+KV+ +K RVEE+ R+ KR ERK W +FG A D++V IE +S E ++ G++ K + PG+ +G XXXXXXXX + TLRVTN+S DT +DDL +LF FG + RV+LA+D+E SRGFAFVSF DA+RA+D+LQGYGYDHLIL+LEWA P + REE + + L Sbjct: 8 WGD-EDDDFLPTRTESEPDKNGVRTIVEWKFNDLGQKVKITKKVQRVEEIH-RISKRVLERKNWKKFGAALQGNDSNVTYPSNETVIEIVSSHGTVDMMCLSFEGASIITCRHCGIVGDHWTL--KCPYKDTPPGEIPTGINSGADEDTKADAXXXXXXXXSSLSRAFGGGPDKYVPPNLRNRGDDKGESYANDTDNATLRVTNISPDTCEDDLYELFRVFGHVLRVYLARDRETLQSRGFAFVSFARVEDAERALDKLQGYGYDHLILKLEWARPSNKPREEDRDAIDAL 294
BLAST of NO06G01330 vs. NCBI_GenBank
Match: OQR93083.1 (eukaryotic translation initiation factor 3 subunit G [Achlya hypogyna]) HSP 1 Score: 141.4 bits (355), Expect = 5.000e-30 Identity = 104/317 (32.81%), Postives = 147/317 (46.37%), Query Frame = 0 Query: 8 WGDYEDDEELPQAVESGPDQNGVVTRTHWDW-KDGRKVRYVQKFRVEEVRTRVPKRTFERKTWARFGDACDAHVRAEEQSIAIEDPNSLAEEEPAAD-------------IKNLGLIRQKLEARKKGLL-----------PSSAPGDSYAEYQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDKFPTLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGLSSGFVSGYGQRLAQD 300 WGD E D+ LP E+ +NG+ T W D KV+ K + TRV KR ERK+WA+FG+A + + ++ P ++ E+P AD + N+G + R G++ S AP + ++ ++D TLRVTNVS +T +DDLK+LF FG L RV+LAKD+E SRGFAFVSF+ + DA++AM++LQGYGYDHLIL+LEWA P + + G + F SGYG+ L Q+ Sbjct: 9 WGDDEIDDVLPPRTET--VENGIKTVVSWKLDADNNKVKVTTKSKKVTSTTRVSKRVIERKSWAKFGEALE-----DNSNVTYTPPEAVYMEDPTADQVIPGEDKDAKSVLDNIGK-ASIVVCRHCGMVGDHWTLKCPYKDSPAPLEDMSDMPRDDEETPAPAAAAAPTRALSFAHAAGGKYVPPSMRGASSSAADDVRQPVQDKDS-ATLRVTNVSPETREDDLKELFRVFGPLERVYLAKDRETFQSRGFAFVSFVYREDAEKAMNKLQGYGYDHLILKLEWAKPSNKAPTDE----GAQGTTFRSGYGKALPQN 312
BLAST of NO06G01330 vs. NCBI_GenBank
Match: XP_009037349.1 (hypothetical protein AURANDRAFT_71733 [Aureococcus anophagefferens] >EGB07983.1 hypothetical protein AURANDRAFT_71733 [Aureococcus anophagefferens]) HSP 1 Score: 138.7 bits (348), Expect = 3.200e-29 Identity = 68/120 (56.67%), Postives = 87/120 (72.50%), Query Frame = 0 Query: 192 TLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGLSSGFVSGYGQRLAQDTTLNYSTASNLT 312 +LRVTN+SEDT + DL+ LF +G + R++LAKD+E SRGFAFVS++ + DA+RAM LQG+GYDHLIL++EWA P + + GGLS GF SGYG+ LAQDT S ASNLT Sbjct: 584 SLRVTNISEDTCEADLQVLFAPYGRIARIYLAKDRETMVSRGFAFVSYIHRQDAERAMAALQGHGYDHLILKIEWAKPSVPKPDAE----GGLSGGFTSGYGKALAQDTKERVSYASNLT 699
BLAST of NO06G01330 vs. NCBI_GenBank
Match: EJK47313.1 (hypothetical protein THAOC_33975 [Thalassiosira oceanica]) HSP 1 Score: 136.7 bits (343), Expect = 1.200e-28 Identity = 72/125 (57.60%), Postives = 85/125 (68.00%), Query Frame = 0 Query: 192 TLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGLSSGFVSGYGQRLAQDTTLNYSTASNLTHGTER 317 TLRVTN+SE+ DL+ LF FG + RV+LAKDKE SRGFAFVSF+ + DA RAMD+LQG+GYDHLIL+LEWA P + G + F SGYG+ LAQDT S ASNLT GT R Sbjct: 266 TLRVTNISEEAXXXDLQDLFSPFGRISRVYLAKDKETMQSRGFAFVSFVHREDAARAMDKLQGHGYDHLILKLEWARPSAPKDP------GSSGTQFRSGYGKALAQDTKEKVSFASNLTTGTGR 384 The following BLAST results are available for this feature:
BLAST of NO06G01330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G01330 ID=NO06G01330|Name=NO06G01330|organism=Nannochloropsis oceanica|type=gene|length=1108bpback to top protein sequence of NO06G01330.1 >NO06G01330.1-protein ID=NO06G01330.1-protein|Name=NO06G01330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=317bpback to top Synonyms
Publications
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