NO06G01330, NO06G01330 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G01330 vs. NCBI_GenBank
Match: EWM26171.1 (initiation factor 3g [Nannochloropsis gaditana]) HSP 1 Score: 433.0 bits (1112), Expect = 8.300e-118 Identity = 224/316 (70.89%), Postives = 241/316 (76.27%), Query Frame = 0 Query: 1 MSRDMKDWGDYEDDEELPQAVESGPDQNGVVTRTHWDWKDGRKVRYVQKFRVEEVRTRVPKRTFERKTWARFGDACDAHVRAEEQSIAIEDPNSLAEEEPAADIKNLGLIRQKLEARKKGLLPSSAPGDSYAEYQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDKFPTLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGLSSGFVSGYGQRLAQDTTLNYSTASNLTHGTER 317 MSR+++DWGDYEDDEELPQ VE PD+NGVVTRT W WKD RKVRYVQKF+VEE+ T VPKRTF RKTWARFGDA DAHVRAEEQSIAIEDP+SLAE+EPAAD+KNLGLI+QKL ARK GLLPS+ PG+S+AEY G EEDKFPT+RVTNVSEDTTDDDLK LFGRFG LHRVFLAKDKERNTSRGFAFVSFL K DAQ+AMD LQGYGYDHLILRLEWANPPTQRREER GL+ GFVSGYGQRLAQDTT+ YSTASNLTHGTER Sbjct: 13 MSREVQDWGDYEDDEELPQPVEGKPDENGVVTRTEWAWKDQRKVRYVQKFKVEEITTHVPKRTFVRKTWARFGDARDAHVRAEEQSIAIEDPHSLAEDEPAADLKNLGLIQQKLAARKAGLLPSTTPGESFAEYDGG------------SGIGGMNGGEEGAPRRTMGERFGGGGPGPQTGPGGREEDKFPTIRVTNVSEDTTDDDLKNLFGRFGVLHRVFLAKDKERNTSRGFAFVSFLKKEDAQKAMDSLQGYGYDHLILRLEWANPPTQRREER----DGLAGGFVSGYGQRLAQDTTMAYSTASNLTHGTER 312
BLAST of NO06G01330 vs. NCBI_GenBank
Match: XP_005853381.1 (translation initiation factor 3 subunit G [Nannochloropsis gaditana CCMP526] >EKU22978.1 translation initiation factor 3 subunit G [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 431.4 bits (1108), Expect = 2.400e-117 Identity = 223/316 (70.57%), Postives = 240/316 (75.95%), Query Frame = 0 Query: 1 MSRDMKDWGDYEDDEELPQAVESGPDQNGVVTRTHWDWKDGRKVRYVQKFRVEEVRTRVPKRTFERKTWARFGDACDAHVRAEEQSIAIEDPNSLAEEEPAADIKNLGLIRQKLEARKKGLLPSSAPGDSYAEYQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDKFPTLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGLSSGFVSGYGQRLAQDTTLNYSTASNLTHGTER 317 MSR+++DWGDYEDDEELPQ VE PD+NGVVTRT W WKD RK RYVQKF+VEE+ T VPKRTF RKTWARFGDA DAHVRAEEQSIAIEDP+SLAE+EPAAD+KNLGLI+QKL ARK GLLPS+ PG+S+AEY G EEDKFPT+RVTNVSEDTTDDDLK LFGRFG LHRVFLAKDKERNTSRGFAFVSFL K DAQ+AMD LQGYGYDHLILRLEWANPPTQRREER GL+ GFVSGYGQRLAQDTT+ YSTASNLTHGTER Sbjct: 448 MSREVQDWGDYEDDEELPQPVEGKPDENGVVTRTEWAWKDQRKARYVQKFKVEEITTHVPKRTFVRKTWARFGDARDAHVRAEEQSIAIEDPHSLAEDEPAADLKNLGLIQQKLAARKAGLLPSTTPGESFAEYDGG------------SGIGGMNGGEEGAPRRTMGERFGGGGPGPQMGPGGREEDKFPTIRVTNVSEDTTDDDLKNLFGRFGVLHRVFLAKDKERNTSRGFAFVSFLKKEDAQKAMDSLQGYGYDHLILRLEWANPPTQRREER----DGLAGGFVSGYGQRLAQDTTMAYSTASNLTHGTER 747
BLAST of NO06G01330 vs. NCBI_GenBank
Match: GBG29776.1 (Eukaryotic translation initiation factor 3 subunit G [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 159.5 bits (402), Expect = 1.800e-35 Identity = 114/319 (35.74%), Postives = 157/319 (49.22%), Query Frame = 0 Query: 5 MKDWGDYED--------DEELPQAVESGPDQNGVVTRTHWDWKDGRKVRYVQKFRVEEVRTRVPKRTFERKTWARFGDACDAHVRAEEQS-------IAIEDP---NSLAEEEPAADIKNL---GLIRQKLE---ARKKGLLPSSAPGDSYAEYQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDKFPTLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGLSSGFVSGYGQRLAQD 300 M DW D +D D+ LP+A E GPD G+ T + +DG+K + ++K +V + +V KR ER W +FG A DA EE++ + IE+P N + E IK L L R+K E A++ +L S G A EE+ TLRVTN+SEDTT+DDL+ LF FG + RV+LA+D+E SRGFA++SF + DAQRAMD+L G+GYDHLIL++EWA P T R++ G + +G VSGYG L Q+ Sbjct: 1 MADWADDDDNVDVTTELDDYLPEAYEEGPDDKGIKTLVSFRIQDGQKQKVIRKVKVVTKKKKVSKRIQERLAWKKFGLAEDAPPGPEEETTIVSRDDVHIENPGDENKAQKREEDEMIKRLRSGALNRKKREEFAAKESTILGSEGMGQGLRTGTA-----------LSQMADAPSSLAAAGGPGGKYVPMHLRGGDAAASMSRFEEEDQTTLRVTNISEDTTEDDLRDLFQPFGRIQRVYLARDRETQISRGFAYISFHYRDDAQRAMDKLNGFGYDHLILKVEWAKPST--RDDAGT-QSVMKAGIVSGYGGALPQN 305
BLAST of NO06G01330 vs. NCBI_GenBank
Match: XP_024581228.1 (eukaryotic translation initiation factor 3g1 [Plasmopara halstedii] >CEG44859.1 eukaryotic translation initiation factor 3g1 [Plasmopara halstedii]) HSP 1 Score: 158.3 bits (399), Expect = 3.900e-35 Identity = 110/318 (34.59%), Postives = 150/318 (47.17%), Query Frame = 0 Query: 8 WGDYEDDEELPQAVESGPDQNGVVTRTHWDWKD-GRKVRYVQKFRVEEVRTRVPKRTFERKTWARFGDACD-------AHVRAEEQSIAIEDPNS--------LAEEEPAADIKNLGLI----------RQKLEARKKGLLPSSAPGDSYAEYQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDKFPTLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGLSSGFVSGYGQRLAQD 300 WGD E+D+ LPQ ES PD NGV W + G KV+ ++K + R+ KR ERK WA+FGDA + ++ EE + ++DPN+ EE A +KN ++ L+ K D ++G D TLRVTNVS DT +DDLK+LF FG + RV+LAKD+E SRGFAFVSF+ + DA++A+++LQGYGYDHLIL+LEWA P T + E G + + F SGYG+ L Q+ Sbjct: 8 WGD-EEDDLLPQRTESEPDSNGVRQIIEWKVNEAGDKVKIIKKVKXXTEVERISKRALERKKWAKFGDALNDGDGSNVTYMSYEE--VKLDDPNADQVLPGEKKEEENIFAGVKNSSIVVCRHCGMVGDHWTLKCPYKDTPKDELEQDMAKRAESGETAEAAASSANLGARSSALDDASGPSKYVPPGLRGRVGATGGDAGGDNARDDSATLRVTNVSPDTREDDLKELFRAFGPVSRVYLAKDRETFQSRGFAFVSFMYREDAEKALNKLQGYGYDHLILKLEWAKPST---KPANEDAGSMGTTFRSGYGKALPQN 319
BLAST of NO06G01330 vs. NCBI_GenBank
Match: OWZ16574.1 (Eukaryotic translation initiation factor 3 subunit G [Phytophthora megakarya]) HSP 1 Score: 157.5 bits (397), Expect = 6.700e-35 Identity = 139/320 (43.44%), Postives = 172/320 (53.75%), Query Frame = 0 Query: 8 WGDYEDDEELPQAVESGPDQNGVVTRTHWDWKD-GRKVRYVQKFRVEEVRTRVPKRTFERKTWARFGDACD-------AHVRAEEQSIAIEDPNS--------LAEEEPAADIKNLGLI----------RQKLEARKKGLLPSSAPGDSYAEYQAG--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDKFPTLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGLSSGFVSGYGQRLAQD 300 WGD E+D+ LPQ VES PD NGV W D G KV+ +K + RV KR ERK WA+FGDA D ++ EE + +EDPN+ EE A +KN ++ L+ K D +AG XXXXXXXXXXXXXXX XXXXXXXX D TLRVTNVS DT +DDLK+LF FG + RV+LAKD+E SRGFAFVSF+ + DA++AM +LQGYGYDHLIL+LEWA P + + E G + + F SGYG+ L Q+ Sbjct: 8 WGD-EEDDLLPQRVESEPDSNGVRQIVEWKLNDAGDKVKVTKKVKKVTEVERVSKRALERKKWAKFGDALDDGDGSNVTYMSYEE--VTLEDPNADQILPGEKKEEENIFAGVKNSSIVVCRHCGMVGDHWTLKCPYKDTPKEELEQDMAKRAEAGEXXXXXXXXXXXXXXXXALDGAFGSSKYVPPSLRGRAGAGGDXXXXXXXXXXDDSCTLRVTNVSPDTREDDLKELFRAFGPVARVYLAKDRETFQSRGFAFVSFMYREDAEKAMAKLQGYGYDHLILKLEWAKPSNKPAQ---EDAGSMGTTFRSGYGKALPQN 321
BLAST of NO06G01330 vs. NCBI_GenBank
Match: POM81424.1 (Eukaryotic translation initiation factor 3 subunit G [Phytophthora palmivora var. palmivora]) HSP 1 Score: 156.0 bits (393), Expect = 2.000e-34 Identity = 139/320 (43.44%), Postives = 174/320 (54.37%), Query Frame = 0 Query: 8 WGDYEDDEELPQAVESGPDQNGVVTRTHWDWKD-GRKVRYVQKFRVEEVRTRVPKRTFERKTWARFGDACD-------AHVRAEEQSIAIEDPNS--------LAEEEPAADIKNLGLI----------RQKLEARKKGLLPSSAPGD--SYAEYQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDKFPTLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGLSSGFVSGYGQRLAQD 300 WGD E+D+ LPQ VES PD NGV W + G KV+ +K + R+ KR ERK WA+FGDA D ++ EE + +EDPN+ EE A +KN ++ L+ K D AE XXXXXXXXXXXXXXXXX XXXXXXXX D TLRVTNVS DT +DDLK+LF FG + RV+LAKD+E SRGFAFVSF+ + DA++AM++LQGYGYDHLIL+LEWA P + + E G + + F SGYG+ L Q+ Sbjct: 8 WGD-EEDDLLPQRVESEPDSNGVRQIVEWKVNEAGDKVKITKKVKKVTEVERISKRALERKKWAKFGDALDDGDGSNVTYMSYEE--VTLEDPNADQILPGEKKEEENIFAGVKNSSIVVCRHCGMVGDHWTLKCPYKDTPKEELEQDMAKRAEXXXXXXXXXXXXXXXXXXXXXLDGAFVSSKYVPPSLRGRAGAGXXXXXXXXNSRDDSCTLRVTNVSPDTREDDLKELFRAFGPVARVYLAKDRETFQSRGFAFVSFMYREDAEKAMNKLQGYGYDHLILKLEWAKPSNKPAQ---EDAGSMGTTFRSGYGKALPQN 321
BLAST of NO06G01330 vs. NCBI_GenBank
Match: ETI45427.1 (hypothetical protein F443_09995 [Phytophthora parasitica P1569] >ETK85372.1 hypothetical protein L915_09799 [Phytophthora parasitica] >ETL38799.1 hypothetical protein L916_09704 [Phytophthora parasitica] >ETL91923.1 hypothetical protein L917_09624 [Phytophthora parasitica] >ETM45215.1 hypothetical protein L914_09672 [Phytophthora parasitica] >ETO74063.1 hypothetical protein F444_10093 [Phytophthora parasitica P1976] >ETP15229.1 hypothetical protein F441_09948 [Phytophthora parasitica CJ01A1] >ETP43308.1 hypothetical protein F442_09902 [Phytophthora parasitica P10297]) HSP 1 Score: 154.5 bits (389), Expect = 5.700e-34 Identity = 117/318 (36.79%), Postives = 155/318 (48.74%), Query Frame = 0 Query: 8 WGDYEDDEELPQAVESGPDQNGVVTRTHWDWKD-GRKVRYVQKFRVEEVRTRVPKRTFERKTWARFGDACD-------AHVRAEEQSIAIEDPNS--------LAEEEPAADIKNLGLI----------RQKLEARKKGLLPSSAPGDSYAEYQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDKFPTLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGLSSGFVSGYGQRLAQD 300 WGD E+D+ LPQ VES PD NGV W + G KV+ +K + R+ KR ERK WA+FGDA D ++ EE + +EDPN+ EE A +KN ++ L+ K D ++G XXXXXX D TLRVTNVS DT +DDLK+LF FG + RV+LAKD+E SRGFAFVSF+ + DA++A+++LQGYGYDHLIL+LEWA P + + G + + F SGYG+ L Q+ Sbjct: 8 WGD-EEDDLLPQRVESEPDSNGVRQIVEWKVNEAGDKVKVTKKVKKVTEVERISKRALERKKWAKFGDALDDGDGSNVTYMSYEE--VKLEDPNADQVLPGEKKEEENIFAGVKNSSIVVCRHCGMVGDHWTLKCPYKDTPKEELEQDMAKRAESGEAAAPAAASAEPAARGSALDGAFGSSKYVPPSLRGRAGAGGDXXXXXXXXDS-ATLRVTNVSPDTREDDLKELFRAFGPVSRVYLAKDRETFQSRGFAFVSFMYREDAEKALNKLQGYGYDHLILKLEWAKPSNKPAH---DDAGSMGTTFRSGYGKALPQN 318
BLAST of NO06G01330 vs. NCBI_GenBank
Match: XP_008893074.1 (hypothetical protein PPTG_01498 [Phytophthora parasitica INRA-310] >ETN21259.1 hypothetical protein PPTG_01498 [Phytophthora parasitica INRA-310] >KUF83585.1 Eukaryotic translation initiation factor 3 subunit G [Phytophthora nicotianae]) HSP 1 Score: 154.5 bits (389), Expect = 5.700e-34 Identity = 117/318 (36.79%), Postives = 155/318 (48.74%), Query Frame = 0 Query: 8 WGDYEDDEELPQAVESGPDQNGVVTRTHWDWKD-GRKVRYVQKFRVEEVRTRVPKRTFERKTWARFGDACD-------AHVRAEEQSIAIEDPNS--------LAEEEPAADIKNLGLI----------RQKLEARKKGLLPSSAPGDSYAEYQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDKFPTLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGLSSGFVSGYGQRLAQD 300 WGD E+D+ LPQ VES PD NGV W + G KV+ +K + R+ KR ERK WA+FGDA D ++ EE + +EDPN+ EE A +KN ++ L+ K D ++G XXXXXX D TLRVTNVS DT +DDLK+LF FG + RV+LAKD+E SRGFAFVSF+ + DA++A+++LQGYGYDHLIL+LEWA P + + G + + F SGYG+ L Q+ Sbjct: 8 WGD-EEDDLLPQRVESEPDSNGVRQIVEWKVNEAGDKVKVTKKVKKVTEVERISKRALERKKWAKFGDALDDGDGSNVTYMSYEE--VKLEDPNADQVLPGEKKEEENIFAGVKNSSIVVCRHCGMVGDHWTLKCPYKDTPKEELEQDMAKRAESGEAAAPAAASAEPAARGSALDGAFGSSKYVPPSLRGRAGAGGDXXXXXXXXDS-ATLRVTNVSPDTREDDLKELFRAFGPVSRVYLAKDRETFQSRGFAFVSFMYREDAEKALNKLQGYGYDHLILKLEWAKPSNKPTH---DDAGSMGTTFRSGYGKALPQN 318
BLAST of NO06G01330 vs. NCBI_GenBank
Match: KUF87986.1 (hypothetical protein AM588_10001651 [Phytophthora nicotianae]) HSP 1 Score: 154.5 bits (389), Expect = 5.700e-34 Identity = 111/318 (34.91%), Postives = 149/318 (46.86%), Query Frame = 0 Query: 8 WGDYEDDEELPQAVESGPDQNGVVTRTHWDWKD-GRKVRYVQKFRVEEVRTRVPKRTFERKTWARFGDACD-------AHVRAEEQSIAIEDPNS--------LAEEEPAADIKNLGLI----------RQKLEARKKGLLPSSAPGDSYAEYQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDKFPTLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGLSSGFVSGYGQRLAQD 300 WGD E+D+ LPQ VES PD NGV W + G KV+ +K + R+ KR ERK WA+FGDA D ++ EE + +EDPN+ EE A +KN ++ L+ K D ++G D TLRVTNVS DT +DDLK+LF FG + RV+LAKD+E SRGFAFVSF+ + DA++A+++LQGYGYDHLIL+LEWA P + + G + + F SGYG+ L Q+ Sbjct: 8 WGD-EEDDLLPQRVESEPDSNGVRQIVEWKVNEAGDKVKVTKKVKKVTEVERISKRALERKKWAKFGDALDDGDGSNVTYMSYEE--VKLEDPNADQVLPGEKKEEENIFAGVKNSSIVVCRHCGMVGDHWTLKCPYKDTPKEELEQDMAKRAESG---------------EAAAPAAASASLPLVVPLWTAPLAPASDAGGDSSRDDSATLRVTNVSPDTREDDLKELFRAFGPVSRVYLAKDRETFQSRGFAFVSFMYREDAEKALNKLQGYGYDHLILKLEWAKPSNKPTH---DDAGSMGTTFRSGYGKALPQN 304
BLAST of NO06G01330 vs. NCBI_GenBank
Match: XP_009526349.1 (hypothetical protein PHYSODRAFT_559962 [Phytophthora sojae] >EGZ17291.1 hypothetical protein PHYSODRAFT_559962 [Phytophthora sojae]) HSP 1 Score: 154.1 bits (388), Expect = 7.400e-34 Identity = 126/322 (39.13%), Postives = 160/322 (49.69%), Query Frame = 0 Query: 8 WGDYEDDEELPQAVESGPDQNGVVTRTHWDWKD-GRKVRYVQKFRVEEVRTRVPKRTFERKTWARFGDACD-------AHVRAEEQSIAIEDPNS--------LAEEEPAADIKNLGLI----------RQKLEARKKGLLPSSAPGDSYAEYQAG----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDKFPTLRVTNVSEDTTDDDLKQLFGRFGSLHRVFLAKDKERNTSRGFAFVSFLSKSDAQRAMDELQGYGYDHLILRLEWANPPTQRREERGEGLGGLSSGFVSGYGQRLAQD 300 WGD E+D+ LPQ ES PD GV W D G KV+ +K + RV KR ERK WA+FGDA D ++ EE + +EDPN+ EE A +KN ++ L+ K D +AG XXXXXXXXXXXXX D TLRVTNVS DT +DDLK+LF FG + RV+LAKD+E SRGFAFVSF+ + DA++A+++LQGYGYDHLIL+LEWA P + E G + + F SGYG+ L Q+ Sbjct: 8 WGD-EEDDVLPQRTESEPDSQGVRQIVEWKLNDAGDKVKVTKKIKKVTEVERVSKRALERKKWAKFGDALDDGDGSNVTYMSYEE--VKLEDPNADQVLPGEKKEEENIFAGVKNSSIVVCRHCGMVGDHWTLKCPYKDTPKEELEQDMAKRAEAGESAXXXXXXXXXXXXXXRGSALDGAFGSSKYVPPSLRGRAGGSGGDVGGGDNSRDDSATLRVTNVSPDTREDDLKELFRAFGPVSRVYLAKDRETFQSRGFAFVSFVYREDAEKALNKLQGYGYDHLILKLEWAKP---SNKPANEDAGSMGTTFRSGYGKALPQN 323 The following BLAST results are available for this feature:
BLAST of NO06G01330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G01330 ID=NO06G01330|Name=NO06G01330|organism=Nannochloropsis oceanica|type=gene|length=1108bpback to top protein sequence of NO06G01330.1 >NO06G01330.1-protein ID=NO06G01330.1-protein|Name=NO06G01330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=317bpback to top Synonyms
Publications
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