NO06G01290, NO06G01290 (gene) Nannochloropsis oceanica

Overview
NameNO06G01290
Unique NameNO06G01290
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2760
Alignment locationchr6:417609..420368 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:417609..420368 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO06G01290 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL089nonsL089Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR145ngnoR145Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000319NSK000319Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G01290.1NO06G01290.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G01290.1NO06G01290.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G01290 ID=NO06G01290|Name=NO06G01290|organism=Nannochloropsis oceanica|type=gene|length=2760bp
ATGGCCAGCATCCAGGTCACGGAGGGCCTGTTGATGGACCTGGGATGGGA
GATTACTGCCAAGAACGGGCGGACCGTCTCTGTAGAGCCGCCACAAGACG
gtaagcctgttttgagatgtttttgtgccgaccccccccctcttccctct
ctgcaatggaacgcgtcgcatgatttgtcgtgcccgcttctttctttcca
tttatcctgcaatggtagcccatcttcgcctgacatgacctcagctgaac
cagctttccatccctctaacgcactctcacctcttcctcccttctctcct
ctttcctcagACAACCCGTCACTGGCAAATTTCCCCCAGTCCTTTGCTAC
GGTCTCCCAAGTCGTGGCCTACCTGCAGGCGGAAGCCCGATACCTCGACC
CGGGACTTGCGGACAAAATCATAAAGAACGCTGCGGGGGAGGCATTTAAT
TGCTTTCTGCGTGCCAGCGGGTGGGAGACACGTCCCGCCAACCGCAGCCA
AGGGCCGGCCACGGAGGTCTTTCCCCGTCGGGTGGCAGTGTTTTACATTC
CACCGGGCTCGCGTTTCCCAATTGAGGGTGTGGAAGGCAAGGACTTCTTC
TCGCACCGCGCGCTGTTTGAGGCATTGCTGGAGACGGAGCTGGGGAATCG
GACCTTGCCGGGAGTCACCCGGGAGGAGGCAGCGGAGATGGTGTTGGAAA
GCATGTTCGCCGAGGCCTGGCGGTGCCTGGAGGAAGCAGGGGATTGGAAG
GTGGATTTTACATGCGGCACCGACGATCGAGCTGACATTGATTATTCGCC
CACGGGCGAGTTAGGGTCCTTGACGGTCTTCAAGAGCAAACGCGCTTTTC
TCCGTGCCTGCCACTACACGACTTCGACCCGGGGTATGCCGCCAATGCCC
GTGGCGGTGGTAGGAGCAGAGGACATGGGTGTGGAGAAGACAAGGGAGGT
CTTGTGGTGTAAGATGGTCAGTCCGAGGTATGATTATTCTTGGAGCCATC
AGATTGACGGTCGGCCGGTCTTTGTCCCGAGGGAGTTAACGGCCGATTTG
GGTCGAGTCGTGATGAGACAGAATGCCTTTGAGAGCTTGAAGGAGTTTGC
CATGCACGTGTTGGAAGCTTCCGCTTCCTCGTCGGGAGCACAAGGAGGAG
CAGCCGCAGTGGCACCCGCGCCTCGGATGCCACTGCAGGAGCAACGAAGG
AGCAGCAGCCATAATGCGCCTGTCGTCTCGTCCTCCTCTACTCCCTACAC
GTCAGCCGCGAAGGCCCCCATCCGAGCCAATGCCAGCATCTTGGGGAGCG
CCGTCAAGCCTGCTACCAATACTGATTCCTCATCCTCCCGTACCACCCCC
GTCCAACGTCCTTCAAGCAGCACCAGCGGCAGCAACAGCGCCGCGGCTGG
TCAGCGGACTGGGACACCAGCGGCAGGAATTATTGACATCTCGCAGGGGG
AGCACGCCTTGTCGATCGACGATGAATGGCCCCGGTTTGTGAAGGTATTG
CCGAAGCACGGGTTTGGGTATTCGTACCGTGGCTTGGACAGCCAGAACCT
AAATTCGTGCGTGTTGCTCATTCCGGCACTGGCAGGTAAAAATGTGGACA
CAACGACGATGGTCGAGGGGCGTGACTTTTTCAAGAATAAGGAGCAGATT
GTCCCGTACATCCAGGCGAGGTATAAGACTAGTCATGAACGGACGGACTT
GCAGAGTCCAAGGGACTTTCGGGTGTTGATGCGGAAAAGCAGTGGAGGGG
GAGGGGTAGGAAAAGGTGGAAAGGGAAGAGGGGTCGTGCCTGGTGGTGGC
GGTGGAGGAGGCGCAGCTGCTGCGGCGGCGGCGCGTTCATCTTCGTCGTC
TGCCGGAGCGTCTGCTCCAGCTGCTCCTGCTCCTGCTCGAGGTGGAGGAC
GGGGAGGAGGGAGCAGCTCCAGTGCCTCCACCGCAGGCTACATTTCCGGC
CCGTCGAAAATGTCCCGAGGAGCCAATCACAGACCAATCAAGCTCGAATC
TTCTGCAGTCGCAGCTGCTTCCCAAGAGGAAGAGCAGCGACCCGTAGAGC
TGTCCCCAGAGGCCCGGGCGGCGTTGTTGGCCATGGTGGTGCCGACGGCG
GAAGACCCGGACCGTTACGATGACATACGGGGGGATGAGGATGTGAGGGA
GATCTGGGCGAAGATGAGGACAGTGCACGGCTGGCACCACGTCAGCGGGA
ATAAGTTCGTCACGTATTTTTATTGCCGGACGAAGAGACCGAAGAAAGGA
GATCCTGCGGAGGAGGGACGGGAGTGGAAGCACGGGGTAGACTACTTCCA
TAGCGAGGAGGAGGTTTACGATTATGTGATGGGAAGGATCAGACCGCGAG
TGGAGGAGGAGGCGAGGCTGCTGGCAATCGCGGCAGCGAGCGCCCCGAGG
CGCCCACCACCTCTTCCTCAACCTGCTGGTGGGGGGAAGAAGAGAAAGAT
TGGAGGTGGAGGGAAAGGAGGGAAGGGGAAGAAGAGTGGAGGAGGGGGGG
ATGTGTTTGAGATTGAAGAAGAGGAGGAGGAGGAGGAGGAGATCACGGCT
TTGAGGCCTGTCATTAAGAAGGAACATAAACTGGCCAAGACGCAAAAGCA
GCAGTTGGAGGAGGATGAAAACGAATTTGACGAGCGGAATACGAAGAGCA
AGGGAAGTAAGGCGGCTGGAGCTAAGAAGGGAGGAGGGCGGAAGAGCGGA
GGCCCCCCCCCATCCCTGTCGTGGCCAATCTCCCGGCTGCCGGAAAGAAG
AGCATGTTGA
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protein sequence of NO06G01290.1

>NO06G01290.1-protein ID=NO06G01290.1-protein|Name=NO06G01290.1|organism=Nannochloropsis oceanica|type=polypeptide|length=850bp
MASIQVTEGLLMDLGWEITAKNGRTVSVEPPQDDNPSLANFPQSFATVSQ
VVAYLQAEARYLDPGLADKIIKNAAGEAFNCFLRASGWETRPANRSQGPA
TEVFPRRVAVFYIPPGSRFPIEGVEGKDFFSHRALFEALLETELGNRTLP
GVTREEAAEMVLESMFAEAWRCLEEAGDWKVDFTCGTDDRADIDYSPTGE
LGSLTVFKSKRAFLRACHYTTSTRGMPPMPVAVVGAEDMGVEKTREVLWC
KMVSPRYDYSWSHQIDGRPVFVPRELTADLGRVVMRQNAFESLKEFAMHV
LEASASSSGAQGGAAAVAPAPRMPLQEQRRSSSHNAPVVSSSSTPYTSAA
KAPIRANASILGSAVKPATNTDSSSSRTTPVQRPSSSTSGSNSAAAGQRT
GTPAAGIIDISQGEHALSIDDEWPRFVKVLPKHGFGYSYRGLDSQNLNSC
VLLIPALAGKNVDTTTMVEGRDFFKNKEQIVPYIQARYKTSHERTDLQSP
RDFRVLMRKSSGGGGVGKGGKGRGVVPGGGGGGGAAAAAAARSSSSSAGA
SAPAAPAPARGGGRGGGSSSSASTAGYISGPSKMSRGANHRPIKLESSAV
AAASQEEEQRPVELSPEARAALLAMVVPTAEDPDRYDDIRGDEDVREIWA
KMRTVHGWHHVSGNKFVTYFYCRTKRPKKGDPAEEGREWKHGVDYFHSEE
EVYDYVMGRIRPRVEEEARLLAIAAASAPRRPPPLPQPAGGGKKRKIGGG
GKGGKGKKSGGGGDVFEIEEEEEEEEEITALRPVIKKEHKLAKTQKQQLE
EDENEFDERNTKSKGSKAAGAKKGGGRKSGGPPPSLSWPISRLPERRAC*
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Synonyms
Publications