NO06G01250, NO06G01250 (gene) Nannochloropsis oceanica

Overview
NameNO06G01250
Unique NameNO06G01250
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4320
Alignment locationchr6:398139..402458 -

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Properties
Property NameValue
DescriptionVacuolar protein sorting-associated protein 13B
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:398139..402458 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR026847VPS13
IPR031645VPS13_C
Homology
BLAST of NO06G01250 vs. NCBI_GenBank
Match: EWM26167.1 (hypothetical protein Naga_100121g4 [Nannochloropsis gaditana])

HSP 1 Score: 854.4 bits (2206), Expect = 5.200e-244
Identity = 597/1491 (40.04%), Postives = 781/1491 (52.38%), Query Frame = 0
Query:    1 MKIAGAQRHAPWAEQSWSKPIGLD-MLAARLPATIXXXXXXXXXXXXXXXXXXXXELAVFIPVQDHSWLPLTLRLVCQSLLPAVGGKDLEG----XXXXXXXXXXXXXXXTGLMTHRLEVRPRLVLQSSVKLPLHTALAVCYPQGGFYTTLEN----SGSNSGIGENALQVLLLQRSEDAPPLEGDAAGWISPQSGSPVNTPNSSNTEXXXXXXXXXXXXXXXXXXXXXXXXXXDVLERSTRRCSAGSIXXXXXXXXXXXXXXXXXXXXXXXXXXS--VAFKRVWCRASNRHSRIGEEGXXXXXXXXXXXRRRKLSLAGTCAMGEQGKYFSYRQTFRLQMVSVGQPLVPTADAAFSSSFSSS------------------MSSCHYHPLELSIQDEDVREIHLSCPRPGAGLWGLNGKDVMVIKLSLDFHQGTHYLLVNVEPNAPFIFLNRSCLYDVHVGVERXXXXXXXXXXXXHSTNLPNVLREAWEEGGEDEAEATPLTMQQSICLLPGSRVEWDPLRPSLWLSSIAS--LASLPPSSTASCTFTASKSTGPXXXXXETEGTEGGMAGAVYRRSTFPTKRIPSFQYRVRAAL--------SMEDDIGEGGKGQGQLSNISGLVSKWSSLLYTGEGSSDEQHALSMTFASSXXXXXIGEEGGAVNSSSIGRDEEAEETIEGYAQELLCAVRRSSKAFLVITSSHAAGMCSLIIDDSLPHQHNSCSS-GNTRSLRKLSPSRSEKQQEPL-AITVGTHVLEIQLLEDEALIE--GAAFGSSSSSSKSWGRVDHEKEERHV-LPVLLFIRIAELQGRYYCSSSSLVGEGRREGGLVKGHRTVEVSLGDMQVDHLVSEAEFPVVLCFLTPXXXXXXXXXXXXXXALEFRFTEALLNPLLLGKWRPQSYVDTLSVVCSKLRVAVDNSLLHTIHLLQDDLSLAATRVAVGTPADGEEYVLDVPALPRRRPLSATPR--TAIDVTPRLFFRSVRMSPLSVLLDARVFVPGSEVFLGLDGSPLFFEEVRLADISSTPQAFIKGLLANYVADAILRSPALLGSLEILGSPAVLVSRVVSGLKDLVVLSSSGSLTGAGKGLLSLTRHVVGGTLSSLSGISSSVRRNLNRGFAGKGERGQLALQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLPSS---GALAEYSAIVNDXXXXXXXXXXXXXXXXXXXXXXXVGRGLFKAVAIPISGAMGVVWWTSERLINTTGVNRGMEQRKERLDYGLKGVGAVCGMHREAFYRQSCRLRFEKGELMGEAHGFMEQRRGISVSSFGGSGLLGSTAVXXXXXXXXXXXXXXXXXXXWLPRMTGAGGGGGLNVSIG-SSCTGKES--THIVPVTLVLAGDDGLFVLSGSHGAESLVLHIVLSSAAFMLQWRHVRVEASSSSLGSEDGVTIHRGLVKYEKAVV----KSGVWWWHLIELRLN-EESGKGLPAAPLKFWLADEEQVRLVKGFLARW 1435
            +K+  AQ     A+Q W KP+GLD ++A+ LP T                     ++++F+PVQ   WLPLTLRL+ +S + A G ++  G                    GL  HRLE+RPRLVLQ+S++LP    +AV YP G F+T   N      S+  I +   Q++LL+RS+DA   + D    +  Q GS + T      +                          D+L+ ST     G I                          S     +RVWCRAS R S   EE            + R   +  T    +  K  +YRQTF L +V+ G+PL   + AA  S+F  +                   S  HY  LE+    ED REIHL CPRPGAGL G NGKD+M I+  L +H+GT Y+ ++ EP+ P + LNRS LYD+HVGVER             S    NV     EE G +     P  MQ ++C+ PG+RVEW+P RP L+LS+IA+  L    P S             P          + G +GA +RRSTF TK+ P+F  R+R AL        ++E + GE G+ +  +++   LVS WSSLL+TG+   D  H L+M+F  +     I  E   + S+       AEE IEG  +ELL A  R+S A +  T S AAG+  L+IDD L H H + +  GN          + E Q++ L  +TVG  VL++QLLED+  I+  G   G+S+ S+ +   VD       + LP LLFIR + ++ RY CS +S           +KG RT+ VSL  +QVDHL + AEFPVVL F                  L+F F E  LNP+++G+ RP SYV+ L +  S++RV VD +LLHTI   Q++L    T    G  +D      D   +PR       P   T  D TP  FF+SV  SPLSVLLDARVFVPGS VFLGLDGSPLFFE VRL D+ STPQAF+KG+L+NYVADAI RSPALLGSLEI+GSPA+LVSRVVSGLKDLV+LS+SGSLTGAG+GLLSLTRHVVGGTL+SL+G SSSVRRNL  G   +G  GQ    +                               LP+    G  AE S+                           VGRGL+KAV  PISGAMGV+WWTS+RLI +TGVNRG+E+ +ERLDYG  G GA C +H +A+YR SC LRF KG L    H +MEQ+R        G    G T                     W  R  G G     + + G SS    ES  T I+PV +VLA +D +++++ SHGAE+ V ++ LS+A   L+WRHV+VEAS SSLGS DG+TIHRGL KYE +++        WWWHLIE+ ++  E G     +PLK WL +EEQVRL+KGFL+RW
Sbjct: 2532 LKLQDAQLTTAPAQQCWCKPVGLDALVASMLPVT------GKSDEERTGITHGIADISLFVPVQGDKWLPLTLRLISRS-VRAGGRRESVGIGECHDIKSTGRKEAFSNAHGLGMHRLEIRPRLVLQNSMRLPARDCVAVYYPDGKFHTAFNNDHGQERSHPKISKADWQIILLRRSKDAFSPKHDEKSMVQ-QKGSSLTTMKGGMPD--------------------LPLPSSDILDNST-----GGIDLLSSPLSSSTVPYSSLPPRSRMSSTSSPTMLRRVWCRASRRPSGSNEENDSDDEAGRTEHQVRANKVTDT----KHVKNVTYRQTFGLCIVAPGRPL---STAAVLSNFRPTTFTTPSHPVPGAGTGILDSSDYHYRMLEIEALGEDAREIHLRCPRPGAGLMGPNGKDIMAIRAHLKYHEGTFYVQISAEPSIPLVVLNRSSLYDIHVGVERWSIERQKEMRKRRS----NVRDSKKEEYGSESGSLLP--MQHTLCVPPGARVEWNPSRPDLYLSAIATPILDGSNPLSDTDVDRQDLDGCTPGITEGAAMKNDEGASGAAFRRSTFSTKKTPTFDCRLRCALAAGKAGIRTVEREGGEKGEWEDNITS-KVLVSTWSSLLHTGKSCGDGCHRLNMSFWKA--SGSITGEKSTIQSNI--PKSSAEEEIEGDGEELLRAFWRTSLAAVTATLSTAAGISCLVIDDCLEHPHKTATDVGNIPGFSSAPRLKVESQRDRLTTLTVGARVLDLQLLEDDVAIQKLGGYAGTSTRSNGARENVDEAVPPGALHLPALLFIRFSGVETRYDCSVAS-------GDAFLKGSRTLNVSLDGLQVDHLANGAEFPVVLYFF---DKQRQRRDYDEYAVLDFTFKEVFLNPIVMGEGRPLSYVEMLKISSSRVRVGVDGALLHTIRFFQENL----TATEKGEDSDASAGWDDRLGVPRILSNKVGPAVLTENDQTPCTFFQSVTFSPLSVLLDARVFVPGSRVFLGLDGSPLFFEGVRLTDVFSTPQAFLKGILSNYVADAIFRSPALLGSLEIIGSPAILVSRVVSGLKDLVMLSASGSLTGAGRGLLSLTRHVVGGTLASLAGFSSSVRRNLEPGERVRG--GQPHGIHDAHFHRRSGSVEFSGNGGTRAGKGEEGRRLSLPAGLDVGGSAEGSS------------KDGGTSGGSGNLLAGVGRGLYKAVTFPISGAMGVIWWTSDRLITSTGVNRGLEEGRERLDYGPAGAGASCSVHWDAYYRHSCGLRFRKGTLKAVIHAYMEQKREKLYVEITGESEQGGT-------------------RGWFGRFIGGGDSARDSSNSGPSSSDNFESGQTTILPVRVVLAEEDAIYIIAHSHGAETSVFNLRLSNAG-ALKWRHVQVEASPSSLGSIDGITIHRGLAKYEASIIDGKEHGEAWWWHLIEMHVDGGERGVIDHFSPLKLWLVNEEQVRLLKGFLSRW 3923          
BLAST of NO06G01250 vs. NCBI_GenBank
Match: XP_005855386.1 (vacuolar protein sorting-associated 13b-like protein, partial [Nannochloropsis gaditana CCMP526] >EKU20972.1 vacuolar protein sorting-associated 13b-like protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 142.5 bits (358), Expect = 1.000e-29
Identity = 77/95 (81.05%), Postives = 88/95 (92.63%), Query Frame = 0
Query:  987 AFIKGLLANYVADAILRSPALLGSLEILGSPAVLVSRVVSGLKDLVVLSSSGSLTGAGKGLLSLTRHVVGGTLSSLSGISSSVRRNLNRGFAGKG 1082
            AF+KG+L+NYVADAI RSPALLGSLEI+GSPA+LVSRVVSGLKDLV+LS+SGSLTGAG+GLLSLTRHVVGGTL+SL+G SSSVRRNL  G   +G
Sbjct:    1 AFLKGILSNYVADAIFRSPALLGSLEIIGSPAILVSRVVSGLKDLVMLSASGSLTGAGRGLLSLTRHVVGGTLASLAGFSSSVRRNLEPGERVRG 95          
BLAST of NO06G01250 vs. NCBI_GenBank
Match: CBN76641.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 117.5 bits (293), Expect = 3.500e-22
Identity = 95/307 (30.94%), Postives = 142/307 (46.25%), Query Frame = 0
Query:  797 VEVSLGDMQVDHLVSEAEFPVVLCF-----LTPXXXXXXXXXXXXXXALEFRFTEALLNPLLLGKW---RPQSYVDTLSVVCSKLRVAVDNSLLHTIHLLQDDLSLAATRVAVGTPAD-GEEYVLDVPA-------------LP-RRRPLSATPRTAIDVTPRLFFRSVRMSPLSVLLDARVFVPGSEVFLGLDGSPLFFEEVRLADISSTPQAFIKGLLANYVADAILRSPALLGSLEILGSPAVLVSRVVSGLKDLVVL-------SSSGSLTGAGKGLLSLTRHVVGGTLSSLSGISSSVRRNL 1074
            ++V LG +Q+D  V+    PV+ CF     L                  + R   +L   +L   W   R  SY++ +S+  + + V  ++SLL  + LL     L  + +   +P D    Y     A             LP +R P    P     V PRLF + V +  L V    + ++PG +VFL LD SPL F  V L  + + P    + + +NY  DA+LRS A++GSLE LGSP  L+S    G+ DL  +         S +     +G+ SL RH   GTLSS+SG+S+++ RNL
Sbjct: 3894 IDVCLGTLQIDSHVAGHRLPVIFCFRKGGRLVQVNEIGMGMPGDDQVKGDCRLAMSL---VLAESWEDSRVPSYLEKVSIHSAPIDVCFEDSLLPPLLLL-----LERSGIGAASPGDRSSPYPFAASANDRGPGSSAAQGGLPSKRSPQLLPPALGASVVPRLFIQRVDIGALVVRATVQGYIPGKQVFLALDKSPLLFRPVSLRGVLARPDEIAEQIASNYAVDALLRSLAVVGSLEALGSPTTLLSEWGKGVYDLFAMPIKAMPQGPSSTFRATFRGVSSLLRHASAGTLSSVSGVSNALSRNL 4192          
BLAST of NO06G01250 vs. NCBI_GenBank
Match: GBG27559.1 (Vacuolar protein sorting-associated protein 13B [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 100.9 bits (250), Expect = 3.400e-17
Identity = 95/298 (31.88%), Postives = 139/298 (46.64%), Query Frame = 0
Query:  804 MQVDHLVSEAEFPVVLCFL-------TPXXXXXXXXXXXXXXALEFRFTEALLNPLLLG-KWR---------PQSYVDTLSVVCSKLRVAVDNSLLHTIHLLQDDLSLAATRVAVGTPADGEEYVLDVPALPRRRPLSATPRTAIDVTPRLFFRSVRMSPLSVLLDARVFVPGSEVFLGLDGSPLFFEEVRLADISSTPQAFIKGLLANYVADAILRSPALLGSLEILGSPAVLVSRVVSGLKDLVV---------LSSSGSLTGAGKGLLSLTRHVVGGTLSSLSGISSSVRRNLNR 1076
            +Q+D  V E+E PVV+ F+       T               A  FR   A+ + +L G  W          P+ +   + +  + L VAV+++LL    L    + +AAT +     A  +   L        +  S  P   +DV  R+F  ++ +  LSV+  A V      +F+G+D +PL F EV L  +    +A    L ANY+ADA+L SPALLGSLEILG+P      V +G+ DLV              G L G  +G  SL  H+  G L S+SG S+S+ RNL+R
Sbjct: 3455 IQMDSFVPESEIPVVMHFVESEDDGETEVALCKFGYNDPRSAAKSFREAWAVRDRVLAGASWTEVTCAGHKLPKQF-GKVHLRLAPLTVAVEDALLK--RLASSLMPIAATLI-----AQQKLLALRKGKYTEVKAKSVCPTQLVDVDDRIFIENLVIGELSVI--ATVRTTTLPMFVGIDRTPLRFSEVSLVRVFEGAKALRNELAANYIADALLGSPALLGSLEILGNPVGFARSVGAGVYDLVFQPLKAIRHGYGPGGILRGVARGWSSLLIHLSEGALMSVSGFSNSIARNLDR 3742          
BLAST of NO06G01250 vs. NCBI_GenBank
Match: ETO05449.1 (vacuolar protein-sorting protein [Reticulomyxa filosa])

HSP 1 Score: 94.0 bits (232), Expect = 4.100e-15
Identity = 88/306 (28.76%), Postives = 125/306 (40.85%), Query Frame = 0
Query:  935 PRLFFRSVRMSPLSVLLDARVFVPGSEVFLGLDGSPLFFEEVRLADISSTPQAFIKGLLANYVADAILRSPALLGSLEILGSPAVLVSRVVSGLKDLVVLSSS-------GSLTGAGKGLLSLTRHVVGGTLSSLSGISSSVRRNLNRGFAGKGERGQLALQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLPSSGALAEYSAIVNDXXXXXXXXXXXXXXXXXXXXXXXVGRGLFKAVAIPISGAMGVVWWTSERLINTTGVNRGMEQRKERLDYGLKGVGAVCGMHREAFYRQSCRLRFEK 1234
            PRLF  S  +S   ++L   V V    VF+G+  +PL  + V L+++   P   +  L A Y+AD  LRSP ++GSL +LG+P   V  V SG +DLV +  S           G G+G L+L +HV  GT +S+S  S S+ RNL R          LA                                    +SG ++   +++                         +G GL  A   PISGA+ +V  TS+ L   TG N    +RK      LK     C  +    YR  CR R E+
Sbjct:   47 PRLFIHSCNVS--EIVLRLSVSVSEIPVFVGVGKAPLVLQPVNLSNVQCAPDHLLHELSAAYLADIFLRSPVVMGSLNLLGNPTQFVESVGSGFRDLVSIPMSSLHDGPQAFFWGIGRGFLALVQHVSEGTFTSVSTFSDSMARNLER----------LATDDPYTQSRHAIRTSAPDSVTSGL------------ASGVVSFSQSVIGGLSGVVSNPSRGLREDGAWGFLKGMGTGLVGAFTKPISGALDLVSATSKGLAANTGPNHEKIERK----LNLKQNPFQCLEYSSLKYRLECRHRGEE 324          
BLAST of NO06G01250 vs. NCBI_GenBank
Match: XP_009537363.1 (hypothetical protein PHYSODRAFT_565640 [Phytophthora sojae] >EGZ07797.1 hypothetical protein PHYSODRAFT_565640 [Phytophthora sojae])

HSP 1 Score: 91.7 bits (226), Expect = 2.100e-14
Identity = 91/317 (28.71%), Postives = 140/317 (44.16%), Query Frame = 0
Query:  791 VKGHRTVEVSLGDMQVDHLVSEAEFPVVLCFLTPXXXXXXXXXXXXXXALEF---RFTEALLNPL--LLGKWRPQS----------YVDTLSVV-CSKLRVAVDNSLLHTIHLLQDDLSLAATRVAVGT--PADGEEYVLDVPALPRRRPLSATPRTA-----IDVTPRLFFRSVRMSPLSVLLDARVFVPGSEVFLGLDGSPLFFEEVRLADISSTPQAFIKGLLANYVADAILRSPALLGSLEILGSPAVLVSRVVSGLKDLVVLSSSGSLTGAGK---------GLLSLTRHVVGGTLSSLSGISSSVRRNLNR 1076
            V+ + T+ V + D++V H +    FPV+LCF                  L+F   R  E L++ +  LLGK  P +          Y DT   V       +++  L   +  ++DD+          T    +GE    DV + PR     A    A     I    +++   + +S L V + ARV +P   V    DG+PL F    + ++ S P    K L A+YVADAI+RSP LL SL I+G+PA  +     G++DLV +  + S  G            G+ S   H    TL+S+SG S S+ R +++
Sbjct:  560 VRSYTTLFVGVEDIEVGHFLQTCNFPVMLCF---------PETHASKDLLQFDRVRKQEKLVDLMGKLLGKQLPGAEFSSLVTRVIYTDTWDPVGIPSYFHSIELKLAPAVLQVEDDILTYVNAFIRPTLDALEGEAASGDVNSKPRTPDEGAWSTAAFESAVITKQRKVYIERLEISNLQVTITARVSIP---VLNSFDGTPLHFGSTEMREVFSFPDQLYKDLAADYVADAIVRSPMLLMSLNIIGNPAGFLRSFGQGVRDLVEIPLAASRNGYSPWVLTKGVVGGVASFLGHATAATLTSVSGFSYSISRTMDQ 864          
BLAST of NO06G01250 vs. NCBI_GenBank
Match: XP_002904026.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY54204.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 88.2 bits (217), Expect = 2.300e-13
Identity = 86/322 (26.71%), Postives = 139/322 (43.17%), Query Frame = 0
Query:  791 VKGHRTVEVSLGDMQVDHLVSEAEFPVVLCFLTPXXXXXXXXXXXXXXALEFRFTEALLN-PLLLGK-----------------------WRP---QSYVDTLSVVCSKLRVAVDNSLLHTIHLLQDDLSLAATRVAVGTPADGEEYVLDVPALPRRR-PLSATPRTAIDVTPRLFFRSVRMSPLSVLLDARVFVPGSEVFLGLDGSPLFFEEVRLADISSTPQAFIKGLLANYVADAILRSPALLGSLEILGSPAVLVSRVVSGLKDLVVLSSSGSLTGAGK---------GLLSLTRHVVGGTLSSLSGISSSVRRNLNR 1076
            ++ + T+ V++ D++V H +    FPV+L F                 +L+F   +   N   L+GK                       W P    SY  ++ +  S   + V++ +L  ++     L  AA   A       +E   D    PR    L A     +    +++   +R+S L V + ARV +P   V    DG+PL+F    + ++ S P   IK L A+YVAD I+RSP LL SL I+G+PA  +     G++DLV +  + S  G            G+ S   H    TL+S+SG S S+ R +++
Sbjct:  556 IRSYTTLFVAVEDIEVGHFLQTCNFPVILHF---------PESHASKNSLQFDRVKKQENLGSLMGKLLDKQLPGAEHACLIARIIYTDTWDPVGIPSYFHSIELKLSPAVLQVEDDILTYVNSFVQPLFAAAEGEAAVRAMHDKE---DRKIAPRDAWSLHAYESVVVTTQRKVYIEWLRISNLQVTITARVSIP---VLNSFDGTPLYFGPTEMREVFSFPDQLIKDLAADYVADTIVRSPMLLMSLNIIGNPAGFLRSFGQGVRDLVEIPLAASRKGYSPWILTKGVVGGVASFLGHTTAATLTSVSGFSYSISRTMDQ 862          
BLAST of NO06G01250 vs. NCBI_GenBank
Match: XP_013756025.1 (hypothetical protein AMSG_07543 [Thecamonas trahens ATCC 50062] >KNC51630.1 hypothetical protein AMSG_07543 [Thecamonas trahens ATCC 50062])

HSP 1 Score: 85.5 bits (210), Expect = 1.500e-12
Identity = 60/139 (43.17%), Postives = 81/139 (58.27%), Query Frame = 0
Query:  944 MSPLSVLLDARVFVPGSEVFLGLDGSPLFFEEVRLADISSTPQAFIKGLLANYVADAILRSPALLGSLEILGSPAVLVSRVVSGLKDLVVLS----SSGSL---TGAGKGLLSLTRHVVGGTLSSLSGISSSVRRNLNR 1076
            +SPL   +  RV V    V LGL+ +P+     RL      P+   + L A Y++DA+L +PALLGSLE+LG+P  LV  V SGL DL ++     SSG +    G G G+ SL RH   GTL SLS +S ++ RNLN+
Sbjct: 3356 VSPLEFEVTLRVSV---GVALGLEATPVAVGGARLGAHCWRPEVLGEILAARYISDALLMTPALLGSLELLGNPTGLVRDVSSGLADLFLMPYHGWSSGPVGFAAGLGSGVSSLLRHTASGTLGSLSSLSGAMARNLNK 3491          
BLAST of NO06G01250 vs. NCBI_GenBank
Match: CEO99351.1 (hypothetical protein PBRA_001257 [Plasmodiophora brassicae])

HSP 1 Score: 84.0 bits (206), Expect = 4.300e-12
Identity = 87/305 (28.52%), Postives = 137/305 (44.92%), Query Frame = 0
Query:  787 EGGLVKGHRTVEVSLGDMQVDHLVSEAEFPVVLCFLTPXXXXXXXXXXXXXXALEFRFTEALLNPLLLGKWRPQSYVDTLSVVCSKLRVAVDNSLLHTIHLLQDDLSLAATRVAVGT---------PADGEEYVLDVPALPRRRPLSATPRTAIDVTPRLFFRSVRMSPLSVLLDARVFVPGSEVFLGLDGSPLFFEEVRLADISSTPQAFIKGLLANYVADAILRSPALLGSLEILGSPAVLVSRVVSGLKDLVVLSSSGSLTG-------AGKGLLSLTRHVVGGTLSSLSGISSSVRRNLNR 1076
            E G +   R + +     QVDHL S  E+PV+   +                 + F  ++  L                L +V SK  +   +  L ++HL  +D +  A+ +A GT          AD     LD P   R  P      + I  +PR F   + +SP+ + L        S  +L  + +PL F  + L  + S+ +  IK L A Y+AD I+RSP LLGSL+++G+P  +VS +  G+ DLV L +     G       A +G+ SL +H+  GTL S+SG + S+  N++R
Sbjct: 2636 EEGAISPCRNLRLRAESFQVDHLRSH-EYPVIAHSVKGDARCALSVVCSWSPFIRFDGSDLSL------------LASPLHMVLSKPDLRSLSLSLSSMHLNLED-AFVASAMAYGTRFIEDVFRKGADSTTASLDSPDW-RGNPEFLALLSKI-TSPRFFAHILDISPVHISLS----FSSSRTYLDTNQTPLHFAPIVLRSVLSSQERLIKELSACYLADTIIRSPMLLGSLDLIGNPTQVVSSISKGIHDLVTLPTRALTQGPRAFAWAAMQGVGSLIQHISEGTLMSVSGFTHSLAGNMDR 2920          
BLAST of NO06G01250 vs. NCBI_GenBank
Match: ETI54001.1 (hypothetical protein F443_03136 [Phytophthora parasitica P1569])

HSP 1 Score: 83.6 bits (205), Expect = 5.600e-12
Identity = 78/312 (25.00%), Postives = 133/312 (42.63%), Query Frame = 0
Query:  791 VKGHRTVEVSLGDMQVDHLVSEAEFPVVLCFLTPXXXXXXXXXXXXXXALEF-RFTEALLNPLLLG--------------KWRP---QSYVDTLSVVCSKLRVAVDNSLLHTIHLLQDDLSLAATRVAVGTPADGEEYVLDVPALPRRRPLSATPRTAIDVTPRLFFRSVRMSPLSVLLDARVFVPGSEVFLGLDGSPLFFEEVRLADISSTPQAFIKGLLANYVADAILRSPALLGSLEILGSPAVLVSRVVSGLKDLVVLSSSGSLTGAG---------KGLLSLTRHVVGGTLSSLSGISSSVRRNLNR 1076
            ++ + T+ V++ D++V H +    FPV+L F                         + LL+  L G               W P    +Y  ++ +  +   + V++ +L  ++     L +AA    +   A  ++   ++        L A     +    R++   + +S L V + ARV +P   V    D +PL F    + ++ S P   IK L A+YVAD I+RSP LL SL ILG+PA  +     G++DLV +  + S  G            G+ S   H    TL+S+SG S S+ R +++
Sbjct: 3596 IRSYTTLFVAVEDIEVGHFLQTCNFPVILHFAEAHASKNLLQFDRVKKHERLGSLMDKLLDKQLPGANNACLVTRVIYTDTWDPIDIPTYFHSIELKLAPAVLQVEDDILTYVNAFVRPL-IAAVEGELAVGAMHDDDCRNIAPSADVWSLHAYESAVVTTQRRVYIEWLEISNLQVTITARVSIP---VLNSFDSTPLHFASTEMREVFSFPDQLIKDLAADYVADTIVRSPMLLMSLNILGNPAGFLRSFGQGIRDLVEIPLAASRNGYSPWVLTKGVVSGVASFLGHTTAATLTSVSGFSYSISRTMDQ 3903          
The following BLAST results are available for this feature:
BLAST of NO06G01250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26167.15.200e-24440.04hypothetical protein Naga_100121g4 [Nannochloropsi... [more]
XP_005855386.11.000e-2981.05vacuolar protein sorting-associated 13b-like prote... [more]
CBN76641.13.500e-2230.94conserved unknown protein [Ectocarpus siliculosus][more]
GBG27559.13.400e-1731.88Vacuolar protein sorting-associated protein 13B [A... [more]
ETO05449.14.100e-1528.76vacuolar protein-sorting protein [Reticulomyxa fil... [more]
XP_009537363.12.100e-1428.71hypothetical protein PHYSODRAFT_565640 [Phytophtho... [more]
XP_002904026.12.300e-1326.71conserved hypothetical protein [Phytophthora infes... [more]
XP_013756025.11.500e-1243.17hypothetical protein AMSG_07543 [Thecamonas trahen... [more]
CEO99351.14.300e-1228.52hypothetical protein PBRA_001257 [Plasmodiophora b... [more]
ETI54001.15.600e-1225.00hypothetical protein F443_03136 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL089nonsL089Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR145ngnoR145Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000317NSK000317Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G01250.1NO06G01250.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100121g4gene4354Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G01250.1NO06G01250.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G01250 ID=NO06G01250|Name=NO06G01250|organism=Nannochloropsis oceanica|type=gene|length=4320bp
ATGAAAATAGCAGGAGCACAGCGGCATGCACCCTGGGCCGAGCAATCGTG
GAGTAAGCCCATTGGATTAGACATGCTCGCAGCCCGTCTTCCTGCTACTA
TCGCCGCAGCGGGAGGGGGTGACCACACCAGCAGCAGCAGCAGTAGTAGC
AGCACTAGTGCAGAGCTGGCTGTCTTCATCCCGGTCCAGGACCATAGCTG
GTTGCCCTTGACCCTTCGTTTAGTGTGCCAGTCGCTGCTGCCAGCCGTCG
GAGGGAAAGATTTAGAGGGGGCAGCAGCAACCGCAGCTGCAGCAACTACG
ACGACAACAACAAAAACAGGCTTGATGACGCATCGATTGGAGGTGCGACC
GCGGTTGGTGCTGCAAAGCTCAGTGAAGCTGCCGTTACATACCGCTCTAG
CCGTGTGCTACCCTCAGGGAGGGTTCTACACCACCCTAGAAAACAGTGGC
AGCAACAGCGGCATTGGAGAAAATGCACTGCAAGTACTGTTGTTGCAACG
GAGTGAAGATGCTCCTCCTTTGGAAGGTGATGCGGCGGGGTGGATCTCGC
CACAGTCGGGCTCGCCGGTTAATACGCCTAATAGCAGCAACACGGAGGTA
GCGCCACCTCTTCCTGACGTTAGTAGTAGCAGCAGCAGCAGCAGTAACAA
CAACGCCAGCAACATCAAGAGTATAGATGTGCTGGAGAGGTCGACGAGGC
GATGCAGCGCCGGGAGCATTGACGTGTCTTCCTCTTCCACGTCTTCCTCT
TCCCTTTCACCATCAACCAGTCAGACTCGTAACCTTTCCACCTCCTCGTC
CGTTGCATTCAAACGTGTCTGGTGCCGGGCCTCCAACCGGCATTCACGGA
TCGGTGAGGAAGGCGAGGACTCTGAGGGTGAGGAGATGGAAGAGGAGCGA
CGAAGAAAGCTGTCCTTGGCGGGCACATGTGCAATGGGGGAGCAAGGCAA
GTACTTTTCGTACCGCCAAACGTTTCGCCTGCAGATGGTGTCCGTAGGCC
AACCGTTGGTACCGACCGCTGATGCTGCTTTCTCCTCCTCTTTTTCATCC
TCCATGTCCTCATGTCACTACCATCCCCTGGAGCTTTCCATCCAAGATGA
AGACGTGAGAGAGATCCACCTCTCCTGTCCTCGGCCCGGAGCAGGCCTCT
GGGGCTTAAATGGAAAAGATGTGATGGTTATCAAGCTCTCCTTAGACTTC
CACCAAGGCACGCATTATTTGTTGGTCAATGTGGAGCCAAACGCACCTTT
TATCTTTTTGAATCGTTCTTGTCTCTACGACGTGCATGTGGGTGTGGAGC
GTCAGCAGCAGCAGCAGCAGCAGCAGCGATCATCGATGCATAGCACGAAC
CTGCCGAATGTCTTACGGGAGGCATGGGAGGAGGGAGGAGAGGATGAGGC
CGAGGCCACGCCTTTGACAATGCAGCAATCCATCTGCCTCTTACCTGGGT
CAAGGGTAGAGTGGGACCCGCTCCGACCGTCCTTATGGTTATCATCCATC
GCAAGCCTAGCCTCCCTACCCCCCTCTTCTACCGCTTCTTGCACTTTCAC
TGCCTCCAAATCCACCGGTCCTGGTGCGGGCGCAGGAGAGACGGAAGGGA
CTGAGGGAGGCATGGCTGGCGCGGTGTATCGCAGGAGTACCTTCCCTACA
AAGCGTATACCCTCCTTCCAGTACCGTGTACGGGCTGCGCTGTCAATGGA
GGATGATATAGGGGAAGGAGGAAAGGGACAGGGGCAGCTGAGTAATATTA
GTGGCTTGGTTTCCAAATGGTCTTCCCTGCTTTACACGGGTGAAGGCAGC
AGCGACGAGCAACATGCTCTCTCAATGACTTTTGCCTCGTCCTCTTCTTC
TCCTCCCATCGGCGAGGAAGGGGGTGCTGTGAACAGCAGTAGCATTGGAA
GGGACGAAGAGGCGGAGGAAACGATTGAGGGATATGCCCAAGAATTGCTG
TGTGCCGTTCGGCGTTCGTCCAAAGCGTTTTTGGTTATAACTTCCTCTCA
CGCCGCCGGAATGTGCTCTCTCATCATCGACGACAGCCTGCCACATCAAC
ACAACAGCTGCAGTAGTGGCAACACCAGAAGCCTTAGGAAGCTTTCCCCC
TCAAGGTCTGAAAAGCAGCAAGAGCCGCTTGCCATCACGGTTGGGACGCA
TGTGTTAGAAATCCAACTGCTTGAGGACGAAGCATTGATCGAAGGAGCAG
CTTTCGGCAGTAGTAGCAGCAGCTCCAAGAGCTGGGGAAGAGTGGACCAT
GAAAAGGAAGAGAGGCATGTGCTGCCAGTGTTGTTGTTTATCCGGATCGC
TGAGCTGCAAGGCCGGTACTATTGCTCTTCATCCTCGTTAGTAGGCGAGG
GGAGGAGGGAAGGAGGACTTGTGAAGGGGCACCGGACGGTGGAGGTGAGC
TTGGGAGACATGCAAGTCGACCACTTAGTGAGTGAGGCCGAGTTCCCTGT
CGTGCTCTGTTTCCTTACGCCGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCATGCATTGGAGTTTCGCTTCACGGAAGCTCTGTTGAAT
CCTCTTCTGTTGGGGAAGTGGAGGCCGCAGTCGTACGTCGATACGTTATC
GGTGGTTTGTTCAAAGCTACGGGTCGCGGTGGACAATTCCCTGCTTCACA
CCATTCACCTACTGCAGGATGACTTGAGCCTCGCAGCTACAAGAGTGGCA
GTAGGAACACCAGCAGATGGGGAAGAATATGTGTTGGACGTACCAGCCCT
TCCTCGTCGTCGTCCTCTCTCTGCTACCCCTCGCACAGCCATCGACGTCA
CTCCTCGCCTCTTCTTTCGTTCCGTCCGCATGAGCCCCTTGTCTGTCCTA
TTGGATGCCCGTGTCTTCGTCCCCGGTTCCGAGGTGTTTTTAGGGCTAGA
TGGCTCCCCCTTATTTTTTGAGGAAGTGCGTCTGGCGGACATATCATCAA
CCCCCCAAGCGTTCATTAAGGGTTTGCTGGCGAATTATGTGGCAGATGCC
ATTCTGCGATCACCCGCTTTGCTAGGGTCATTGGAGATATTGGGGAGTCC
CGCGGTGTTGGTTTCGAGGGTGGTGAGTGGATTAAAAGACTTGGTCGTTC
TTTCGTCGTCCGGCTCTTTGACGGGTGCAGGGAAGGGATTGTTGTCCTTA
ACAAGACATGTGGTGGGAGGGACGCTGTCGAGTCTGTCTGGCATCTCGTC
GTCAGTACGGCGAAATTTGAACCGTGGTTTTGCGGGGAAGGGAGAAAGGG
GGCAATTGGCGTTGCAGTATCAGCAGTATCATCACCACCACCAGCACGAG
CAACGTCGGGGGAGTATTGGGGCTAGTGCAGGTGGCGGCATGGGAGCGAA
GGAGGGAGGGCGGTTACCCTCATCTGGTGCTTTGGCAGAATACTCTGCTA
TTGTCAATGATGACACAAAAAGTAGCAGTCGTAGTAGCAGCAGCAACAGC
AGCAGCTATAGTGCGGGCCTGCTGGCGGGAGTGGGTCGTGGGTTGTTCAA
AGCTGTAGCGATACCTATAAGTGGGGCTATGGGGGTGGTCTGGTGGACAT
CGGAAAGACTAATAAATACCACAGGTGTGAATCGGGGAATGGAACAAAGA
AAAGAGCGATTGGACTATGGCTTAAAGGGAGTAGGCGCGGTGTGTGGCAT
GCATAGGGAGGCATTTTATCGGCAGTCGTGTCGGTTGAGGTTTGAAAAGG
GAGAGTTGATGGGGGAGGCACACGGTTTTATGGAGCAGAGGCGAGGGATC
TCCGTGTCGTCGTTCGGCGGTAGTGGACTTTTGGGCAGTACTGCAGTAGC
AGCGGGTGGAGGAAGAGGAGAAGGAGGAGGAGAAGGAGAAGGAGGGAGGG
TAGGGTGGCTTCCCAGGATGACGGGTGCTGGAGGAGGAGGGGGTTTAAAT
GTCAGTATTGGCAGCAGCTGTACGGGGAAGGAGTCGACGCACATTGTGCC
TGTGACGCTAGTGCTGGCGGGGGATGATGGACTCTTCGTGTTATCGGGAT
CGCATGGGGCGGAGAGTTTGGTGCTTCACATCGTTTTGTCTTCGGCTGCG
TTCATGTTGCAATGGCGGCATGTTAGAGTGGAGGCATCGTCCTCCTCATT
GGGGTCGGAGGATGGGGTGACCATTCATCGGGGCTTGGTCAAGTATGAGA
AGGCAGTGGTGAAGAGTGGAGTGTGGTGGTGGCATTTGATTGAGTTGCGG
TTGAATGAAGAAAGTGGGAAGGGGTTACCGGCGGCACCGCTCAAGTTCTG
GCTAGCAGATGAGGAGCAGGTGCGTCTTGTCAAGGGGTTCTTGGCCAGAT
GGGTTACGGCGAACGCGTAA
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protein sequence of NO06G01250.1

>NO06G01250.1-protein ID=NO06G01250.1-protein|Name=NO06G01250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1440bp
MKIAGAQRHAPWAEQSWSKPIGLDMLAARLPATIAAAGGGDHTSSSSSSS
STSAELAVFIPVQDHSWLPLTLRLVCQSLLPAVGGKDLEGAAATAAAATT
TTTTKTGLMTHRLEVRPRLVLQSSVKLPLHTALAVCYPQGGFYTTLENSG
SNSGIGENALQVLLLQRSEDAPPLEGDAAGWISPQSGSPVNTPNSSNTEV
APPLPDVSSSSSSSSNNNASNIKSIDVLERSTRRCSAGSIDVSSSSTSSS
SLSPSTSQTRNLSTSSSVAFKRVWCRASNRHSRIGEEGEDSEGEEMEEER
RRKLSLAGTCAMGEQGKYFSYRQTFRLQMVSVGQPLVPTADAAFSSSFSS
SMSSCHYHPLELSIQDEDVREIHLSCPRPGAGLWGLNGKDVMVIKLSLDF
HQGTHYLLVNVEPNAPFIFLNRSCLYDVHVGVERQQQQQQQQRSSMHSTN
LPNVLREAWEEGGEDEAEATPLTMQQSICLLPGSRVEWDPLRPSLWLSSI
ASLASLPPSSTASCTFTASKSTGPGAGAGETEGTEGGMAGAVYRRSTFPT
KRIPSFQYRVRAALSMEDDIGEGGKGQGQLSNISGLVSKWSSLLYTGEGS
SDEQHALSMTFASSSSSPPIGEEGGAVNSSSIGRDEEAEETIEGYAQELL
CAVRRSSKAFLVITSSHAAGMCSLIIDDSLPHQHNSCSSGNTRSLRKLSP
SRSEKQQEPLAITVGTHVLEIQLLEDEALIEGAAFGSSSSSSKSWGRVDH
EKEERHVLPVLLFIRIAELQGRYYCSSSSLVGEGRREGGLVKGHRTVEVS
LGDMQVDHLVSEAEFPVVLCFLTPQQQQQQQQQQQQQHALEFRFTEALLN
PLLLGKWRPQSYVDTLSVVCSKLRVAVDNSLLHTIHLLQDDLSLAATRVA
VGTPADGEEYVLDVPALPRRRPLSATPRTAIDVTPRLFFRSVRMSPLSVL
LDARVFVPGSEVFLGLDGSPLFFEEVRLADISSTPQAFIKGLLANYVADA
ILRSPALLGSLEILGSPAVLVSRVVSGLKDLVVLSSSGSLTGAGKGLLSL
TRHVVGGTLSSLSGISSSVRRNLNRGFAGKGERGQLALQYQQYHHHHQHE
QRRGSIGASAGGGMGAKEGGRLPSSGALAEYSAIVNDDTKSSSRSSSSNS
SSYSAGLLAGVGRGLFKAVAIPISGAMGVVWWTSERLINTTGVNRGMEQR
KERLDYGLKGVGAVCGMHREAFYRQSCRLRFEKGELMGEAHGFMEQRRGI
SVSSFGGSGLLGSTAVAAGGGRGEGGGEGEGGRVGWLPRMTGAGGGGGLN
VSIGSSCTGKESTHIVPVTLVLAGDDGLFVLSGSHGAESLVLHIVLSSAA
FMLQWRHVRVEASSSSLGSEDGVTIHRGLVKYEKAVVKSGVWWWHLIELR
LNEESGKGLPAAPLKFWLADEEQVRLVKGFLARWVTANA*
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Synonyms
Publications