NO06G01240, NO06G01240 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G01240 vs. NCBI_GenBank
Match: EWM26165.1 (Protein of unknown function DUF4336 [Nannochloropsis gaditana]) HSP 1 Score: 409.1 bits (1050), Expect = 1.400e-110 Identity = 207/320 (64.69%), Postives = 249/320 (77.81%), Query Frame = 0 Query: 16 LLLLLLSLGSAATHSVLALLNHAPSSSLRPGIATSSARMATTTDRASTTARQRFPLLFPPSVRPTSVFFGDKRNKLWTFEQPFITTTNIKSRMSVFKSGSSIVIYSPIAATPECLDMVKQTAGGLPTHIIMQSNAVDHTLFLEGWRKAIPSAQILNISPTKGDLPLLLNPSSSANSTRNVVPLPFQSTTAPIVEAALLDIPPFFQEVVLFHKPSKSILCADAIWRVVSPEFSPNVVAATGWKAIFFVDGVSRFPYWFYFPRRKRAEVSRFVEQVQGWGEIKRCLPGHLDPIPSAGVGEKEGVGEVDVKRVFLDSFDFILR 336 L+LL ++ SA H + S + + +M++ D ST RQ+ L FPPSVRPTS+ F D ++K+WTFEQPFITTTNIK+RMSVFK +SIV+YSPIAATPEC DMV+ GG+PT+IIMQSNA+DHT+FL GWR+A+PSAQILNISP +GDLP +L SSS T ++PLPFQ PIVEAALLDI PFF+E+VLFHKPSK++LCADAIWRVVSP FSPN+VAATGWK +F V GVSRFPYWFYFPRRKRA+V +FV+QVQ WGEI+RCLPGHLD IP+A VGE++ E VKR+FL SFDFILR Sbjct: 18 LVLLFVARASAFLHH---QCHRRRLSRQCAALRARTPKMSSEIDETSTIQRQKLFLPFPPSVRPTSLVFSDAQHKVWTFEQPFITTTNIKTRMSVFKCETSIVMYSPIAATPECCDMVRNIVGGMPTYIIMQSNAIDHTIFLNGWRRAVPSAQILNISPREGDLP-MLKDSSSGGETAIILPLPFQRGNQPIVEAALLDIEPFFREIVLFHKPSKTLLCADAIWRVVSPTFSPNIVAATGWK-LFGVSGVSRFPYWFYFPRRKRAQVQQFVDQVQAWGEIERCLPGHLDAIPAAAVGEEQTAEE--VKRIFLQSFDFILR 330
BLAST of NO06G01240 vs. NCBI_GenBank
Match: EWM30496.1 (Protein of unknown function DUF4336 [Nannochloropsis gaditana]) HSP 1 Score: 105.5 bits (262), Expect = 3.200e-19 Identity = 75/236 (31.78%), Postives = 126/236 (53.39%), Query Frame = 0 Query: 70 PLLFPPSVRPTSVFFGDKRNKLWTFEQPFIT-TTNIKSRMSVFK-SGSSIVIYSPIAATPECLDMVKQTAGGLPTHI-----IMQSNAVDHTLFLEGWRKAIPSAQILNISPTKGDLP--LLLNPSSSANSTRNVVPLPFQSTTAPIVEAALLDIPPFFQEVVLFHKPSKSILCADAIWRVVSPEFSPNVVAATGWKAIFFVDGV-SRF--PYWFYFPRRKRAEVSRFVEQVQGWG 294 P L PP +PT++ D++ LW FEQPF+ ++K+RMSV + S +YSP+AATPEC+DM+K + ++ S+ +H L WR+ P A+++++ P + LL PS+ A S +P P + ++ A+ + P +E+VL HKPSK++ AD+ + ++ E+S ++ + I + G+ RF P +F K+ E R E+V+ WG Sbjct: 138 PSLLPPRKKPTTLLISDRKRGLWVFEQPFVLGVVDVKNRMSVLRLSDGGFALYSPLAATPECIDMLKSLVKSEKLSLSSAWFMVPSSFPEHHESLVTWREVFPEARVVSVHPRINVISEFLLEGPSTDAPSQ---LPFPLRKD----LDVAVYE-TPLLREMVLTHKPSKTLFVADSGF-YINEEYSNSLT-----RGITQLQGIYDRFVTPPFFRLGMNKK-EGKRLYERVKDWG 358
BLAST of NO06G01240 vs. NCBI_GenBank
Match: CBJ25644.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 80.5 bits (197), Expect = 1.100e-11 Identity = 57/176 (32.39%), Postives = 86/176 (48.86%), Query Frame = 0 Query: 67 QRFPLLFPPSVRPTSVFFGDKR--NKLWTFEQPF--ITTTNIKSRMSVFK-SGSSIVIYSPIAATPECLDMVKQTAGGLPTHIIMQSNAVDHTLFLEGWRKAIPSAQILNISPTKGDLPLLLNPSSSANSTRNVVPLPFQSTTAPIVEAALLDIPPFFQEVVLFHKPSKSILCADA 238 Q FP LFPP RP D LW FEQP + T + SRM+V+ S SI +Y+PIA T E L + GG P HII+ + A ++ LF+ GW + P A + K LP A T+++ F + ++ ++L+ F+E L H+ ++S+ D+ Sbjct: 54 QAFPGLFPPVHRPLRWRDEDSEPMRGLWLFEQPLQTVPTVEMYSRMAVYALSDGSICVYNPIAPTEETLQEISDAFGG-PDHIIVPTTAWNNLLFVAGWAERFPRATFWGLEGVK--LP-------GAKFTKDLTMESFPESWKAELDVSILEGNGIFRECFLLHRTTRSVFAMDS 219
BLAST of NO06G01240 vs. NCBI_GenBank
Match: WP_038081414.1 (DUF4336 domain-containing protein [Tolypothrix bouteillei] >KIE09383.1 hypothetical protein DA73_0234120 [Tolypothrix bouteillei VB521301]) HSP 1 Score: 80.5 bits (197), Expect = 1.100e-11 Identity = 59/181 (32.60%), Postives = 95/181 (52.49%), Query Frame = 0 Query: 91 LWTFEQ-PFITTTNIKSRMSVFK-SGSSIVIYSPIAATPECLDMVKQTA---GGLPTHIIMQSNAVDHTLFLEGWRKAIPSAQILNISPTKGDLPLLLNPSSSANSTRNVVPLPFQSTTAPIV---EAALLDI---PPFFQEVVLFHKPSKSILCADAIWRVVSPEFSPNVVAATGWKAIF 261 +WTFEQ I T + RM+V K SG ++IY+P+A TPEC+ ++K+ G + I+ S+ ++H +F+ + + P AQ+ +SP + P+ L S ++ +P S+ P + A+LDI F EV LFHK S+++L D I V PE P +V + +F Sbjct: 38 IWTFEQVQGILYTVVPIRMTVVKLSGGGLLIYAPVAPTPECIRLLKEVVAKHGDVKYIILPTSSGLEHKVFVGPFARRFPQAQVF-VSPHQWSFPVNLPLSWLGFPSKRTYIIPENSSELPFADDFDCAVLDINLGRGSFVEVALFHKRSRTLLLTDTILSV--PEDPPAIVQLDPYPLLF 215
BLAST of NO06G01240 vs. NCBI_GenBank
Match: XP_005646585.1 (hypothetical protein COCSUDRAFT_16894 [Coccomyxa subellipsoidea C-169] >EIE22041.1 hypothetical protein COCSUDRAFT_16894 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 78.6 bits (192), Expect = 4.200e-11 Identity = 55/192 (28.65%), Postives = 100/192 (52.08%), Query Frame = 0 Query: 69 FPLLFPPSVRPTSVFFGDKRNKLWTFEQPFI-----TTTNIKSRMSVFKSGSSIVIYSPIAATPECLDMVKQTAGGLPTHIIMQSNAVDHTLFLEGWRKAIPSAQILNISPTKGDLPLLLNPS-----SSANSTRNVVPLPFQSTTAPIVEAALLDIPPFFQEVVLFHKPSKSILCADAIWRVVSPEFSPNV 251 FP P + ++ + +R +WTFEQ TTN++ + +SG + +++PIA T EC+ +VK+ G HI++ + AV+H LF+ + +A PSAQ+ +++P + PL L S+ N P+ + ++ + I PF EV FHK ++++L D++ ++ P+ +P V Sbjct: 125 FPFPLGPLLTRRTIRYEVERGSMWTFEQEQALGFSNVTTNVRMTVIKLRSG-GLWVHAPIAPTKECVALVKE-LGAPVEHIVLPTFAVEHKLFVGPFSRAFPSAQV-HVAPRQWSWPLWLPVQFFGIFPSSILVDNDASTPWADELEQKIFSSAVGIGPFL-EVAFFHKATRTLLTTDSV--IMVPQTAPEV 310
BLAST of NO06G01240 vs. NCBI_GenBank
Match: WP_012160845.1 (DUF4336 domain-containing protein [Acaryochloris marina] >ABW25230.1 conserved hypothetical protein [Acaryochloris marina MBIC11017]) HSP 1 Score: 77.4 bits (189), Expect = 9.300e-11 Identity = 59/186 (31.72%), Postives = 94/186 (50.54%), Query Frame = 0 Query: 88 RNKLWTFEQ-PFITTTNIKSRMSVFK-SGSSIVIYSPIAATPECLDMVK---QTAGGLPTHIIMQSNAVDHTLFLEGWRKAIPSAQILNISPTKGDLPLLLNPSSSANSTRNVVPLPFQSTTAP--------IVEAALLDIPPFFQEVVLFHKPSKSILCADAIWRVVSPEFSPNVVAATGWKAIF 261 + K+WTFEQ I I RM+V K + +++Y+P+A T EC+ MVK + G + I+ ++ ++H +F + K P AQ+ +SP++ PL + S S R LP S P I+ L + P F+EV L+HKP+K++L D+I V P P V+ + +F Sbjct: 48 KGKIWTFEQLQGILYVIIPVRMTVIKLAAGGLLVYAPVAPTRECIRMVKDLIEKHGEIKYIILPTASGIEHKVFTGPFSKRFPKAQVF-VSPSQWTFPLNIPLSWLGLSGRQTQKLPANSADTPFADEFDYAILGPVDLGLGP-FEEVALYHKPTKTLLITDSI--VSIPVNPPQVLQFAPYPMLF 229
BLAST of NO06G01240 vs. NCBI_GenBank
Match: WP_039780492.1 (DUF4336 domain-containing protein [Acaryochloris sp. CCMEE 5410]) HSP 1 Score: 76.6 bits (187), Expect = 1.600e-10 Identity = 58/186 (31.18%), Postives = 95/186 (51.08%), Query Frame = 0 Query: 88 RNKLWTFEQ-PFITTTNIKSRMSVFK-SGSSIVIYSPIAATPECLDMVK---QTAGGLPTHIIMQSNAVDHTLFLEGWRKAIPSAQILNISPTKGDLPLLLNPSSSANSTRNVVPLPFQSTTAP--------IVEAALLDIPPFFQEVVLFHKPSKSILCADAIWRVVSPEFSPNVVAATGWKAIF 261 + K+WTFEQ I I RM+V K + +++Y+P+A T EC+ +VK + G + I+ ++ ++H +F + K P AQ+ +SP++ PL + S S R LP S P I+ L + P F+EV L+HKP+K++L D+I V P P V+ + + +F Sbjct: 48 KGKIWTFEQLQGILYVIIPVRMTVIKLAAGGLLVYAPVAPTRECIRLVKDLIEQHGEIKYIILPTASGIEHKVFTGPFSKRFPKAQVF-VSPSQWTFPLNIPLSWLGLSGRQTQKLPASSADTPFADEFDYAILGPVDLGLGP-FEEVALYHKPTKTLLITDSI--VSIPVNPPQVLQFSPYPMLF 229
BLAST of NO06G01240 vs. NCBI_GenBank
Match: WP_066117435.1 (DUF4336 domain-containing protein [Geminocystis sp. NIES-3709] >BAQ64569.1 Sll1399 protein [Geminocystis sp. NIES-3709]) HSP 1 Score: 76.6 bits (187), Expect = 1.600e-10 Identity = 56/200 (28.00%), Postives = 103/200 (51.50%), Query Frame = 0 Query: 72 LFPPSVRPTSVFFGDKRNKLWTFEQPF-ITTTNIKSRMSVFK-SGSSIVIYSPIAATPECLDMVKQTA---GGLPTHIIMQSNAVDHTLFLEGWRKAIPSAQILNISPTKGDLPLLLNPSSSANSTRNVVPLPFQSTTAPIVEA---ALLDI---PPFFQEVVLFHKPSKSILCADAIWRVVSPEFSPNVVAATGWKAIF 261 L+P RPT + ++ +WTFEQP + + RM++ K + +++Y PIA TPEC+++VK+ G + I S+ ++H +F+ + + P ++ + +P++ PL L + +R LP +P + +LDI P F EV L HKPSK++L D + ++ P++ P ++ + +F Sbjct: 18 LYPYRQRPT-LREEIVKDTIWTFEQPHGLLYAVVPIRMTIVKLAKGGLLVYCPIAPTPECVNLVKELENDHGEVKYIIHSTSSGLEHKVFVGPFARYFPQGEVWS-APSQWSFPLNLPLTWLGFPSRRTKILPPDCQKSPFADEFNYQILDIDLSPGSFVEVALLHKPSKTLLVTDTVIKI--PQYPPKIIKLNPFPLLF 213
BLAST of NO06G01240 vs. NCBI_GenBank
Match: WP_013324066.1 (DUF4336 domain-containing protein [Cyanothece sp. PCC 7822] >ADN15998.1 conserved hypothetical protein [Cyanothece sp. PCC 7822]) HSP 1 Score: 74.3 bits (181), Expect = 7.900e-10 Identity = 56/185 (30.27%), Postives = 96/185 (51.89%), Query Frame = 0 Query: 88 RNKLWTFEQ-PFITTTNIKSRMSVFK-SGSSIVIYSPIAATPECLDMVKQTA---GGLPTHIIMQSNAVDHTLFLEGWRKAIPSAQILNISPTKGDLPLLLNPSSSANSTRNVVPLPFQSTTAPI---VEAALLDI----PPFFQEVVLFHKPSKSILCADAIWRVVSPEFSPNVVAATGWKAIF 261 ++++WTFEQ I + RMSV K S +++Y+P+A TPEC+ +V++ G + I+ + ++H +F+ + + SAQ+ +SP + PL L S + LPF S+ P ++ A+L P FQEV LF K S+++L D++ + PE P +V + +F Sbjct: 40 KDQVWTFEQIQGILYVIVPIRMSVIKLSVGGLLVYAPVAPTPECIRLVRELEVQHGEVKYIILPTISGIEHKVFVGPFARYFKSAQVF-VSPNQWSFPLNLPLSWLGFPGKRTHFLPFDSSQTPFADQIDYAILKTIELGPGQFQEVALFDKHSQTLLVTDSVLSI--PENPPAIVQLDPYALLF 221
BLAST of NO06G01240 vs. NCBI_GenBank
Match: WP_017748287.1 (DUF4336 domain-containing protein [Scytonema hofmannii] >KYC36540.1 hypothetical protein WA1_43400 [Scytonema hofmannii PCC 7110]) HSP 1 Score: 73.9 bits (180), Expect = 1.000e-9 Identity = 56/180 (31.11%), Postives = 93/180 (51.67%), Query Frame = 0 Query: 91 LWTFEQ-PFITTTNIKSRMSVFK-SGSSIVIYSPIAATPECLDMVKQTA---GGLPTHIIMQSNAVDHTLFLEGWRKAIPSAQILNISPTKGDLP--LLLNPSSSANSTRNVVPLPFQSTTAPIVEAALLDI---PPFFQEVVLFHKPSKSILCADAIWRVVSPEFSPNVVAATGWKAIF 261 +WT EQ I T + RM+V K S ++IY+P+A TPEC+ +VK+ G + I+ S+ ++H +F+ + + P AQ+ ++P + P L L+ ++ ++P A + A+LDI +F EV LFHK S+++L D I V PE P +V + +F Sbjct: 38 IWTLEQVQGILYTVVPIRMTVVKLSAGGLLIYAPVAPTPECIRLVKELEAKHGDVKYIILPTSSGLEHKVFVGPFARRFPQAQVF-VAPHQWSFPVDLPLSWLGFPSNRTQIIPKNSSLPFADDFDCAVLDINLGRGYFVEVALFHKRSRTLLLTDTILSV--PEEPPAIVQLDPYPLLF 214 The following BLAST results are available for this feature:
BLAST of NO06G01240 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G01240 ID=NO06G01240|Name=NO06G01240|organism=Nannochloropsis oceanica|type=gene|length=1229bpback to top protein sequence of NO06G01240.1 >NO06G01240.1-protein ID=NO06G01240.1-protein|Name=NO06G01240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=336bpback to top Synonyms
Publications
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