NO06G01170, NO06G01170 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G01170 vs. NCBI_GenBank
Match: EWM26085.1 (cupin 4 family protein [Nannochloropsis gaditana]) HSP 1 Score: 434.9 bits (1117), Expect = 2.800e-118 Identity = 229/414 (55.31%), Postives = 281/414 (67.87%), Query Frame = 0 Query: 4 SRLIEHRPHSGRDKQAGQEE---DEKDSEWSVRQGPFDEEDFEDDPEGGE-RTWTVLVQEVDRHVPEVADLLQSFRFLPNWRLDDIMISYAPQAGGIGPHVDNYDVFLLQSHGTRRWSIQNSLLSAADELSSLLPNSPVRVLGTWEEDHSWVLRPGDMLYLPPRVPHNGVSLDKDCMTYSIGFRAPTQAELLHAA-IXXXXXXXXXXXXQTFYSDQSLALPRDAGEITPNALSQLKEMVKKGMASVLDDEYVLARWMGKHLTRPRQTRXXXXXXXXXXXXXXXXXXXXXXYLVEIDREEAETIVQELM---------ERGKGEGEKKEQWGVVYRAEGLKFAHALENSLLFVDGHVWELKDEDGERRWRVCACLTGGPSPLPADELKELLNSSPECSEIVREWLERGFLYVLGE 404 SRLIEH + R+K +EE ++ + WSVRQGPFDEEDF+ + + GE RTWTVLVQEVDRHVPEV DLLQSFRFLPNWR+DDIMISYAPQAGGIGPHVDNYDVFLLQ GTR+WSIQN+L+ E SL+P++P+RVL ++ E H+W L PGD+LYLPPRVPH+GVSLD+DCMTYSIGFRAPTQ ELL AA FY D L +D GEITP AL Q++ +V+ +A+VLDD+ +LARW G+ LT P+ + V ++REEA +VQEL+ E+G + + +YRAEGLKFAHA LLFVDGHVW+L+DED ERR R+C CLTGG SP P ++ +L S EC ++V EWL RGFLYV+ E Sbjct: 412 SRLIEH--WALRNKVEAEEEGCHGDEGATWSVRQGPFDEEDFQGEGDEGEGRTWTVLVQEVDRHVPEVGDLLQSFRFLPNWRVDDIMISYAPQAGGIGPHVDNYDVFLLQGRGTRKWSIQNALMDRETEARSLIPHNPLRVLASFRETHAWTLEPGDLLYLPPRVPHDGVSLDQDCMTYSIGFRAPTQEELLEAATAAAVSTLREREAGPRFYVDPHLPYAQDVGEITPVALKQVRGLVQDALAAVLDDDALLARWAGRSLTGPKH------------RSRAVAAEEGEEFGVWMEREEARAVVQELLGWESSREIEEKGATQASMPRK---LYRAEGLKFAHADGGRLLFVDGHVWDLRDEDEERRRRICNCLTGGASPFPLQDISSVLRESLECVDVVTEWLMRGFLYVVEE 808
BLAST of NO06G01170 vs. NCBI_GenBank
Match: WP_068126421.1 (cupin domain-containing protein [Rhodothermaceae bacterium RA] >ARA94214.1 cupin [Rhodothermaceae bacterium RA]) HSP 1 Score: 239.2 bits (609), Expect = 2.300e-59 Identity = 119/238 (50.00%), Postives = 155/238 (65.13%), Query Frame = 0 Query: 27 DSEWSVRQGPFDEEDFEDDPEGGERTWTVLVQEVDRHVPEVADLLQSFRFLPNWRLDDIMISYAPQAGGIGPHVDNYDVFLLQSHGTRRWSIQNSLLSAADELSSLLPNSPVRVLGTWEEDHSWVLRPGDMLYLPPRVPHNGVSLDKDCMTYSIGFRAPTQAELLHAAIXXXXXXXXXXXXQTFYSDQSLALPRDAGEITPNALSQLKEMVKKGMASVLDDEYVLARWMGKHLTRPRQ 265 D W + GPF EDFE P E W++LVQEVDR+VPEVA LL+ FRF+PNWR+DD+MISYAP+ GG+GPHVDNYDVFLLQ G RRW I ++ + E L+P+ VR+L +E D WVL PGD+LYLPPR+PHNG++ D DCMTYSIGFRAP+ ELL + Y+D L P + G I+P AL++++ M+ V DE + RW G+ +T P++ Sbjct: 65 DYPWQLHYGPFSPEDFEALP---ETHWSLLVQEVDRYVPEVAALLEHFRFVPNWRIDDVMISYAPKHGGVGPHVDNYDVFLLQGLGHRRWQIHHTPV----EEEHLVPDLDVRILADFEPDAEWVLAPGDLLYLPPRIPHNGIAED-DCMTYSIGFRAPSTVELLEGFLSHVIEHANPGRR---YADPDLRPPAEPGAISPEALARIRSMI----TEVFQDEQTIDRWFGRFMTEPKR 287
BLAST of NO06G01170 vs. NCBI_GenBank
Match: WP_076716827.1 (cupin domain-containing protein [Motiliproteus sp. MSK22-1] >OMH38010.1 cupin [Motiliproteus sp. MSK22-1]) HSP 1 Score: 231.9 bits (590), Expect = 3.600e-57 Identity = 128/324 (39.51%), Postives = 179/324 (55.25%), Query Frame = 0 Query: 23 EDEKDSEWSVRQGPFDEEDFEDDPEGGERTWTVLVQEVDRHVPEVADLLQSFRFLPNWRLDDIMISYAPQAGGIGPHVDNYDVFLLQSHGTRRWSIQNSLLSAADELSSLLPNSPVRVLGTWEEDHSWVLRPGDMLYLPPRVPHNGVSLDKDCMTYSIGFRAPTQAELLHAAIXXXXXXXXXXXXQTFYSDQSLALPRDAGEITPNALSQLKEMVKKGMASVLDDEYVLARWMGKHLTRPRQTRXXXXXXXXXXXXXXXXXXXXXXYLVEIDREEAETIVQELMERGKGEGEKKEQWGVVYRAEGLKFAHALENSL--LFVDGH 345 E + +W ++ GPF+E F + P+ WT+LVQ VD VPE ADL++ FRF+P+WRLDD+M+SYA GG+GPH DNYDVFLLQ+ G RRW I D+ S LP PVR+L W+ + SWVL PGDMLYLPPRV HNGV++ DC+TYS+G+RAP ++L + YSD L+L +GEI + L +++ M ++ ++D LARW G+ +T P+ E E++ V+EL K + G++ R EG++FA++L L LFV GH Sbjct: 62 ETPETGDWQLKHGPFEESLFSELPQD---HWTLLVQGVDHWVPEAADLVEQFRFIPSWRLDDLMVSYAAPGGGVGPHYDNYDVFLLQAAGQRRWEIG----GLYDQDSEFLPGKPVRILSQWQPEQSWVLNPGDMLYLPPRVGHNGVAVSDDCVTYSVGYRAPQNGDML---MHFANFCGWQLKDTDRYSDPDLSLRNSSGEICNSDLQRVQSMFRE----FVEDRENLARWFGRFVTEPKYPENQQ----------------------EATPEDSGDPVEEL---------KMQPDGILRRGEGIRFAYSLSGGLLQLFVHGH 340
BLAST of NO06G01170 vs. NCBI_GenBank
Match: CBJ28975.1 (cupin superfamily protein [Ectocarpus siliculosus]) HSP 1 Score: 230.7 bits (587), Expect = 8.100e-57 Identity = 109/245 (44.49%), Postives = 156/245 (63.67%), Query Frame = 0 Query: 20 GQEEDEKDSEWSVRQGPFDEEDFEDDPEGGERTWTVLVQEVDRHVPEVADLLQSFRFLPNWRLDDIMISYAPQAGGIGPHVDNYDVFLLQSHGTRRWSIQNSLLSAADELSSLLPNSPVRVLGTWEEDHSWVLRPGDMLYLPPRVPHNGVSLDKDCMTYSIGFRAPTQAELLHAAIXXXXXXXXXXXXQTFYSDQSLALPRDAGEITPNALSQLKEMVKKGMASVLDDEYVLARWMGKHLTRPRQ 265 G+ D +W V GPF+E+ F + GE WT+LV EV+RHVPEV+DLL F+F+P+WR+DD+M+SYAP+ G +GPH+DNYDVFLLQ G R WSI++S S +E L+ + +RVL +++ WVL PGD LYLPPR+ H GVS D++CMTYS+GFRAP+ +L+ + F+ D +L G I+ A+S+ K +V++ + + LDD+ RW G +TR R+ Sbjct: 32 GRYVDNAGKDWEVEHGPFEEKMFSN---LGETHWTLLVNEVNRHVPEVSDLLMKFQFIPSWRVDDVMVSYAPKGGSVGPHLDNYDVFLLQGAGKRLWSIEDSFTSGEEEEERLVKDIDIRVLAEFKKSEGWVLEPGDALYLPPRLAHYGVSQDEECMTYSVGFRAPSVRDLV--SFFGEHVGSTATKPDDFFQDPNLKRQESHGLISREAVSKAKGLVREALLAALDDDVAFDRWFGAQVTRSRR 271
BLAST of NO06G01170 vs. NCBI_GenBank
Match: WP_027859825.1 (cupin domain-containing protein [Marinobacterium jannaschii]) HSP 1 Score: 230.3 bits (586), Expect = 1.100e-56 Identity = 127/340 (37.35%), Postives = 184/340 (54.12%), Query Frame = 0 Query: 29 EWSVRQGPFDEEDFEDDPEGGERTWTVLVQEVDRHVPEVADLLQSFRFLPNWRLDDIMISYAPQAGGIGPHVDNYDVFLLQSHGTRRWSIQNSLLSAADELSSLLPNSPVRVLGTWEEDHSWVLRPGDMLYLPPRVPHNGVSLDKDCMTYSIGFRAPTQAELLHAAIXXXXXXXXXXXXQTFYSDQSLALPRDAGEITPNALSQLKEMVKKGMASVLDDEYVLARWMGKHLTRPRQTRXXXXXXXXXXXXXXXXXXXXXXYLVEIDREEAETIVQELMERGKGEGEKKEQWGVVYRAEGLKFAH---ALENSLLFVDGHVWELKDEDGERRWRVCACLTG 366 EW ++ GPF EE F D P+ WT+LVQ VD VP+ ++L++ FRF PNWR+DD+MISYA GG+GPH DNYDVFL+Q+ G RRW + DE S N+PV +L W+E+ SWVL PGDMLYLPPRV HNGV++ CMTYS+GFRAP+ E+L + + Y D L + + GEI+P A++Q++ + ++ L ++ L+ W G+++T P+ EI E+ +QE++E G ++ R EG +F++ A + +LF DG+ +E + CA TG Sbjct: 66 EWKLKHGPFSEESFSDLPDS---HWTLLVQAVDHWVPQASELIEQFRFAPNWRIDDLMISYAADGGGVGPHYDNYDVFLIQAEGQRRWEVGGIF----DEFSPRRENTPVMILTEWKEEQSWVLNPGDMLYLPPRVGHNGVAVGDGCMTYSVGFRAPSHEEILRGLV---EELSGKLKNEDRYQDPDLEIQSNPGEISPKAIAQIRSITEE----YLCNDSFLSDWFGRYMTEPKYPDLEQVPED------------------EISLEQ----IQEVLEEGD---------LLLTRNEGSRFSYYQLADDKVILFADGNSFECEG-------ATCALATG 353
BLAST of NO06G01170 vs. NCBI_GenBank
Match: WP_091359165.1 (cupin domain-containing protein [Amphritea atlantica] >SEQ77156.1 50S ribosomal protein L16 3-hydroxylase [Amphritea atlantica]) HSP 1 Score: 229.6 bits (584), Expect = 1.800e-56 Identity = 104/236 (44.07%), Postives = 154/236 (65.25%), Query Frame = 0 Query: 28 SEWSVRQGPFDEEDFEDDPEGGERTWTVLVQEVDRHVPEVADLLQSFRFLPNWRLDDIMISYAPQAGGIGPHVDNYDVFLLQSHGTRRWSIQNSLLSAADELSSLLPNSPVRVLGTWEEDHSWVLRPGDMLYLPPRVPHNGVSLDKDCMTYSIGFRAPTQAELLHAAIXXXXXXXXXXXXQTFYSDQSLALPRDAGEITPNALSQLKEMVKKGMASVLDDEYVLARWMGKHLTRPR 264 S+W ++ GPFD++ F + P+ WT+LVQ VD VPE +++++ FRF+PNWR DD+M+S+A Q GG+GPH DNYDVFL+Q+ G RRW + D+ S P++PV ++ WE +++WVL PGDMLY+PP+V HNG+ DCMTYS+GFRAP+ AE++ + ++ Y+D LAL + GEI P AL +++E+ S L+D+ L W+GK +T P+ Sbjct: 63 SDWQIQHGPFDDDTFSNLPDS---HWTLLVQAVDHWVPEASEIVEQFRFIPNWRYDDLMVSFASQGGGVGPHYDNYDVFLIQTQGKRRWEVGGFF----DQNSPRRPDTPVMIMTEWEPEYNWVLEPGDMLYIPPQVGHNGIGESDDCMTYSVGFRAPSHAEIMRS---FTDFIGEKLTSESRYTDPDLALQDNPGEIRPEALQKVREI----FTSYLEDDARLGEWLGKFVTDPK 284
BLAST of NO06G01170 vs. NCBI_GenBank
Match: WP_012842559.1 (cupin domain-containing protein [Rhodothermus marinus] >ACY46947.1 Cupin 4 family protein [Rhodothermus marinus DSM 4252]) HSP 1 Score: 227.6 bits (579), Expect = 6.900e-56 Identity = 118/235 (50.21%), Postives = 152/235 (64.68%), Query Frame = 0 Query: 30 WSVRQGPFDEEDFEDDPEGGERTWTVLVQEVDRHVPEVADLLQSFRFLPNWRLDDIMISYAPQAGGIGPHVDNYDVFLLQSHGTRRWSIQNSLLSAADELSSLLPNSPVRVLGTWEEDHSWVLRPGDMLYLPPRVPHNGVSLDKDCMTYSIGFRAPTQAELLHAAIXXXXXXXXXXXXQTFYSDQSLALPRDAGEITPNALSQLKEMVKKGMASVLDDEYVLARWMGKHLTRPRQ 265 W VR GPF+ EDF P WT+LVQEVDR VPEVA LL++ RF+PNWRLDDIM+SYAP+ G +G H+DNYDVFL+Q+ G RRW I + + E L+P VR+L +E D W+L PGD+LYLPPR+PH GV+L+ DCMT+SIGFRAP QAEL A Y+D L + GEITP AL Q++ +++ +++DD LARW G +T PR+ Sbjct: 67 WEVRYGPFEPEDFVALP---PTHWTLLVQEVDRLVPEVAALLETVRFVPNWRLDDIMVSYAPEGGTVGAHIDNYDVFLVQAWGRRRWQINHRPV----EREELVPGLEVRLLAHFEPDAEWILEPGDVLYLPPRIPHYGVALE-DCMTFSIGFRAPDQAELAEAMPRMAAWLDGGRR----YADPDLTPADEPGEITPEALDQIQALLR----ALIDDRERLARWFGCIITEPRR 285
BLAST of NO06G01170 vs. NCBI_GenBank
Match: WP_014065779.1 (cupin domain-containing protein [Rhodothermus marinus] >AEN71991.1 Cupin 4 family protein [Rhodothermus marinus SG0.5JP17-172]) HSP 1 Score: 227.6 bits (579), Expect = 6.900e-56 Identity = 118/235 (50.21%), Postives = 152/235 (64.68%), Query Frame = 0 Query: 30 WSVRQGPFDEEDFEDDPEGGERTWTVLVQEVDRHVPEVADLLQSFRFLPNWRLDDIMISYAPQAGGIGPHVDNYDVFLLQSHGTRRWSIQNSLLSAADELSSLLPNSPVRVLGTWEEDHSWVLRPGDMLYLPPRVPHNGVSLDKDCMTYSIGFRAPTQAELLHAAIXXXXXXXXXXXXQTFYSDQSLALPRDAGEITPNALSQLKEMVKKGMASVLDDEYVLARWMGKHLTRPRQ 265 W VR GPF+ EDF P WT+LVQEVDR VPEVA LL++ RF+PNWRLDDIM+SYAP+ G +G H+DNYDVFL+Q+ G RRW I + + E L+P VR+L +E D W+L PGD+LYLPPR+PH GV+L+ DCMT+SIGFRAP QAEL A Y+D L + GEITP AL Q++ ++++ ++DD LARW G +T PR+ Sbjct: 67 WKVRYGPFEPEDFVALP---PTHWTLLVQEVDRLVPEVAALLETVRFIPNWRLDDIMVSYAPEGGTVGAHIDNYDVFLVQAWGRRRWQINHRPV----EREELVPGLEVRLLAHFEPDAEWILEPGDVLYLPPRIPHYGVALE-DCMTFSIGFRAPDQAELAEAMPRMAAWLDGGRR----YADPDLTPADEPGEITPEALDQIQALLRE----LIDDRARLARWFGCIITEPRR 285
BLAST of NO06G01170 vs. NCBI_GenBank
Match: 4CSW_A (Chain A, Rhodothermus marinus YCFD-like ribosomal protein L16 Arginyl hydroxylase >4CSW_B Chain B, Rhodothermus marinus YCFD-like ribosomal protein L16 Arginyl hydroxylase >4CUG_A Chain A, Rhodothermus marinus YCFD-like ribosomal protein L16 Arginyl hydroxylase in complex substrate fragment >4CUG_B Chain B, Rhodothermus marinus YCFD-like ribosomal protein L16 Arginyl hydroxylase in complex substrate fragment) HSP 1 Score: 227.6 bits (579), Expect = 6.900e-56 Identity = 118/235 (50.21%), Postives = 152/235 (64.68%), Query Frame = 0 Query: 30 WSVRQGPFDEEDFEDDPEGGERTWTVLVQEVDRHVPEVADLLQSFRFLPNWRLDDIMISYAPQAGGIGPHVDNYDVFLLQSHGTRRWSIQNSLLSAADELSSLLPNSPVRVLGTWEEDHSWVLRPGDMLYLPPRVPHNGVSLDKDCMTYSIGFRAPTQAELLHAAIXXXXXXXXXXXXQTFYSDQSLALPRDAGEITPNALSQLKEMVKKGMASVLDDEYVLARWMGKHLTRPRQ 265 W VR GPF+ EDF P WT+LVQEVDR VPEVA LL++ RF+PNWRLDDIM+SYAP+ G +G H+DNYDVFL+Q+ G RRW I + + E L+P VR+L +E D W+L PGD+LYLPPR+PH GV+L+ DCMT+SIGFRAP QAEL A Y+D L + GEITP AL Q++ +++ +++DD LARW G +T PR+ Sbjct: 81 WEVRYGPFEPEDFVALP---PTHWTLLVQEVDRLVPEVAALLETVRFVPNWRLDDIMVSYAPEGGTVGAHIDNYDVFLVQAWGRRRWQINHRPV----EREELVPGLEVRLLAHFEPDAEWILEPGDVLYLPPRIPHYGVALE-DCMTFSIGFRAPDQAELAEAMPRMAAWLDGGRR----YADPDLTPADEPGEITPEALDQIQALLR----ALIDDRERLARWFGCIITEPRR 299
BLAST of NO06G01170 vs. NCBI_GenBank
Match: WP_026078808.1 (cupin domain-containing protein [Pseudomonas nitroreducens]) HSP 1 Score: 227.3 bits (578), Expect = 9.000e-56 Identity = 116/240 (48.33%), Postives = 155/240 (64.58%), Query Frame = 0 Query: 27 DSEWSVRQGPFDEEDFEDDPEGGERTWTVLVQEVDRHVPEVADLLQSFRFLPNWRLDDIMISYAPQAGGIGPHVDNYDVFLLQSHGTRRWSIQNSLLSAADELSSLLPNSPVRVLGTWEEDHSWVLRPGDMLYLPPRVPHNGVSLDKDCMTYSIGFRAPTQAELLHAAIXXXXXXXXXXXXQTFYSDQSLALPR---DAGEITPNALSQLKEMVKKGMASVLDDEYVLARWMGKHLTRPR 264 DS W +R+GPF E+ F P ER WT+LVQ VD+ +PEVADLL+ F+FLP+WR+DD+MISYA GG+GPH DNYDVFLLQ HG RRW + + D S +LP++ +R+L +EE WVL PGDMLYLPPRV H G++ D DCMTYS+GFRAP+ AE+L + YSD +A + D +I +AL +LK ++++ M+ DE +L W G+ +T PR Sbjct: 65 DSPWELRRGPFQEDTFSQMP---ERDWTLLVQAVDQFIPEVADLLEHFKFLPSWRIDDVMISYAAPGGGVGPHFDNYDVFLLQGHGRRRWKVGQT----CDASSPMLPHADLRILAEFEECADWVLEPGDMLYLPPRVAHYGIAED-DCMTYSVGFRAPSAAEVL---THFTDFLAQFLSDEERYSDAGMAAMKGDSDQHQIQRDALDRLKNLLQEHMS----DERLLLTWFGQFMTEPR 289 The following BLAST results are available for this feature:
BLAST of NO06G01170 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G01170 ID=NO06G01170|Name=NO06G01170|organism=Nannochloropsis oceanica|type=gene|length=1973bpback to top protein sequence of NO06G01170.1 >NO06G01170.1-protein ID=NO06G01170.1-protein|Name=NO06G01170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=412bpback to top Synonyms
Publications
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