NO06G01160, NO06G01160 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G01160 vs. NCBI_GenBank
Match: EWM26085.1 (cupin 4 family protein [Nannochloropsis gaditana]) HSP 1 Score: 277.3 bits (708), Expect = 3.100e-71 Identity = 138/166 (83.13%), Postives = 149/166 (89.76%), Query Frame = 0 Query: 1 MRAHLSLLLLALVAAFIGLATVTSAADPKDCEVCIGVLEKIDAGLDAKAKKNKLAIEEAIETYCTRKDIDNKEKKLCYFLKPIKRDVSQPFSTGMPKAKVCERLKKKSAEICTIKYPVKVDSQTDYSKLRVKELKAILSERGVECTGCLEKPDFIKKCEETAHLSA 167 MRAHLSL ++A + +DPKDCEVCIGVLEKIDAG++AKAKKNKLA+E+AIE YC+RKDIDNKEKKLCYFLKPIKRDVSQPFSTGMPKAKVC RLKKKSAEIC IKYPVKVDSQTDY+KLRVKELKAIL+ERGVECTGCLEKPDFIKKCEETAHLSA Sbjct: 25 MRAHLSLGVVAALXXXXXXXXXXXXSDPKDCEVCIGVLEKIDAGMEAKAKKNKLAVEDAIEAYCSRKDIDNKEKKLCYFLKPIKRDVSQPFSTGMPKAKVCARLKKKSAEICGIKYPVKVDSQTDYTKLRVKELKAILAERGVECTGCLEKPDFIKKCEETAHLSA 190
BLAST of NO06G01160 vs. NCBI_GenBank
Match: GAX94618.1 (Hypothetical protein PINS_002510 [Pythium insidiosum]) HSP 1 Score: 161.8 bits (408), Expect = 1.900e-36 Identity = 78/163 (47.85%), Postives = 111/163 (68.10%), Query Frame = 0 Query: 10 LALVAAFIGLATVTSAADPKDCEVCIGVLEKIDAG----LDAKAKKNKLAIEEAIETYCTRKDIDNKEKKLCYFLKPIKRDVSQPFSTGMPKAKVCERLKKKSAEICTIKYPVKVDSQTDYSKLRVKELKAILSERGVECTGCLEKPDFIKKCEETAHLSAEL 169 L +AA + +A T+ AD K+CEVC+ V++ + + K KK E A+E YC K + K+ KLCYFL+P+K+DV++ S G K+ + L+KK+ + C+++YPVK D+ TDY K+RVKELK IL+ERGVEC GC+EKPDFIKK +ET HL ++L Sbjct: 382 LLAIAALVVVAANTAYADSKECEVCVKVVDDVKGVYAKLAEQKGKKTLAVAENAVEKYCGSKKLAAKDNKLCYFLEPLKKDVARQVSFGKDSMKIXKSLEKKNPDFCSMRYPVKTDANTDYRKMRVKELKKILTERGVECVGCVEKPDFIKKIKETEHLHSDL 544
BLAST of NO06G01160 vs. NCBI_GenBank
Match: GAX11254.1 (RNA-binding protein 15 [Fistulifera solaris]) HSP 1 Score: 159.1 bits (401), Expect = 1.200e-35 Identity = 74/148 (50.00%), Postives = 105/148 (70.95%), Query Frame = 0 Query: 24 SAADPKDCEVCIGVLEKIDAGLDAKAKKNKLAIEEAIETYCTRK--DIDNKEKKLCYFLKPIKRDVSQPFSTGMPKAKVCERLKKKSAEICTIKYPVKVDS--QTDYSKLRVKELKAILSERGVECTGCLEKPDFIKKCEETAHLSAE 168 S +CEVC+ V++++ A + + K K IE AI YC K + ++EKK+CY++ PIKRDV+QPFS GMP KVCER+ K + EIC++K PVK D+ + D SKLRVK+LK IL++RGVEC GC+EK +F+K+ +ET HL+ + Sbjct: 16 SVVSAGECEVCVKVMDEVRASMSKEDSKKKPEIEAAIGKYCANKGNKLSSREKKICYYIDPIKRDVAQPFSLGMPSLKVCERINKSNPEICSVKLPVKTDNMEKQDISKLRVKQLKQILADRGVECVGCVEKEEFVKRVQETEHLAED 163
BLAST of NO06G01160 vs. NCBI_GenBank
Match: GAX13426.1 (RNA-binding protein 15 [Fistulifera solaris]) HSP 1 Score: 158.7 bits (400), Expect = 1.600e-35 Identity = 74/153 (48.37%), Postives = 107/153 (69.93%), Query Frame = 0 Query: 19 LATVTSAADPKDCEVCIGVLEKIDAGLDAKAKKNKLAIEEAIETYCTRK--DIDNKEKKLCYFLKPIKRDVSQPFSTGMPKAKVCERLKKKSAEICTIKYPVKVDS--QTDYSKLRVKELKAILSERGVECTGCLEKPDFIKKCEETAHLSAE 168 L T+ +CEVC+ V++++ A + + K K IE AI YC K + ++EKK+CY++ PIKRDV+QPFS GMP KVCER+ K + EIC++K PVK ++ + D SKLRVK+LK IL++RGVEC GC+EK +F+K+ +ET HL+ + Sbjct: 11 LCLATNVVSAGECEVCVKVMDEVRASMSKEDSKKKPEIEAAIGKYCANKGNKLSSREKKICYYIDPIKRDVAQPFSLGMPSLKVCERINKSNPEICSVKLPVKTENMEKQDISKLRVKQLKQILADRGVECVGCVEKEEFVKRVQETEHLAED 163
BLAST of NO06G01160 vs. NCBI_GenBank
Match: OEU16618.1 (hypothetical protein FRACYDRAFT_275419, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 156.8 bits (395), Expect = 6.100e-35 Identity = 81/152 (53.29%), Postives = 105/152 (69.08%), Query Frame = 0 Query: 19 LATVTSAA-DPKDCEVCIGVLEKIDAGLDAKAKKNKLAIEEAIETYCTRKD--IDNKEKKLCYFLKPIKRDVSQPFSTGMPKAKVCERLKKKSAEICTIKYPVKVDSQ--TDYSKLRVKELKAILSERGVECTGCLEKPDFIKKCEETAHLS 166 LAT AA DPK+CEVCI V+++I A + K K IE A+ TYC KD + +EKK+CY++ PIKRD++QPFS GM K+C+R+ K + EIC++KYPVK D D SKLRVK+LK IL ERGV+ G LEK +F+KK E T HL+ Sbjct: 11 LATAALAAEDPKECEVCIKVMDEIRATMTKADTKKKPMIENAMNTYCENKDEKLTAREKKICYYIDPIKRDIAQPFSLGMSSLKLCKRITKSNPEICSVKYPVKTDKMETKDLSKLRVKQLKKILDERGVDYKGLLEKDEFVKKVEATEHLA 162
BLAST of NO06G01160 vs. NCBI_GenBank
Match: XP_002288151.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED93587.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 156.4 bits (394), Expect = 8.000e-35 Identity = 78/167 (46.71%), Postives = 123/167 (73.65%), Query Frame = 0 Query: 1 MRAHLSLLLLALVAAFIGLATVTSAADPKDCEVCIGVLEKIDAGLDAKAKKNKLAIEEAIETYCTRKDIDNKEKKLCYFLKPIKRDVSQPFSTGMPKAKVCERLKKKSAEICTIKYPVKVDS--QTDYSKLRVKELKAILSERGVECTGCLEKPDFIKKCEETAHLS 166 MRA +S+L AL+AA ++V +A+DP++CEVC+ V++ + + + +K+K IE+AI +C + + +E+K+CY++ PIKRDV+QPFS GM KVC+R+ K + EIC++K+PVK ++ + D +KLRVK+LK+IL +RGVEC GC+EK +FI + +ET HL+ Sbjct: 1 MRA-ISILSAALLAA----SSVNAASDPRECEVCMKVMQDVRDAMPKEDQKDKPKIEQAIGAHCKKDTLSARERKICYYIDPIKRDVAQPFSLGMTVEKVCKRIDKTNPEICSVKFPVKTENLEKKDLTKLRVKQLKSILLDRGVECKGCVEKEEFIARVQETEHLA 162
BLAST of NO06G01160 vs. NCBI_GenBank
Match: XP_002176890.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51353.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 155.6 bits (392), Expect = 1.400e-34 Identity = 76/164 (46.34%), Postives = 112/164 (68.29%), Query Frame = 0 Query: 6 SLLLLALVAAFIGLATVTSAADPKDCEVCIGVLEKIDAGLDAKAKKNKLAIEEAIETYCTRKDIDNKEKKLCYFLKPIKRDVSQPFSTGMPKAKVCERLKKKSAEICTIKYPVKVDSQ--TDYSKLRVKELKAILSERGVECTGCLEKPDFIKKCEETAHLSAE 168 S+ LL++VA LAT+T DCEVC+ V+E + A + K AIE A+ YC R + +E+K+CY++ PIKRDV+QPFS GM K C+R+ + + EICT+K+PVK + D +KLRVK+LK IL++RGVEC GC+EK +F+K+ +ET H++++ Sbjct: 97 SMKLLSIVAL---LATLTIGWAANDCEVCVKVMEDVRATIPKADASKKPAIEAALGAYCARDTLSARERKICYYIDPIKRDVAQPFSLGMTALKTCQRINQSNPEICTVKFPVKTEKMETKDINKLRVKQLKQILADRGVECKGCVEKEEFVKRVQETEHMASD 257
BLAST of NO06G01160 vs. NCBI_GenBank
Match: XP_009035089.1 (hypothetical protein AURANDRAFT_59975, partial [Aureococcus anophagefferens] >EGB10276.1 hypothetical protein AURANDRAFT_59975, partial [Aureococcus anophagefferens]) HSP 1 Score: 155.2 bits (391), Expect = 1.800e-34 Identity = 76/156 (48.72%), Postives = 106/156 (67.95%), Query Frame = 0 Query: 27 DPKDCEVCIGVLEKIDAGLDAKAKKNKLAIEEAIETYC-------TRKDIDNKEKKLCYFLKPIKRDVSQPFSTGMPKAKVCERLKKKSAEICTIKYPVKVDSQ-------TDYSKLRVKELKAILSERGVECTGCLEKPDFIKKCEETAHLSAEL 169 DPK+CEVCI LE IDA +D K +K +I E I +C +++++++K+CY+ +PI+ ++QPFST MPK +VC+RLKK +AEIC +KYPV+VD K+RVKELK IL++RGV+C GCLEK DFIK+ ET H+S +L Sbjct: 3 DPKECEVCIANLEAIDALIDKDEKTSKQSIMEGITKHCGDLQNEAPNPNLNSRDRKMCYYFEPIRAAIAQPFSTRMPKDRVCKRLKKDNAEICEVKYPVQVDENISPEEFLAKLKKMRVKELKGILNDRGVKCEGCLEKDDFIKRIVETKHMSTDL 158
BLAST of NO06G01160 vs. NCBI_GenBank
Match: XP_008608283.1 (hypothetical protein SDRG_04386 [Saprolegnia diclina VS20] >EQC38691.1 hypothetical protein SDRG_04386 [Saprolegnia diclina VS20]) HSP 1 Score: 152.9 bits (385), Expect = 8.800e-34 Identity = 80/159 (50.31%), Postives = 109/159 (68.55%), Query Frame = 0 Query: 8 LLLALVAAFIGLATVTSAADPKDCEVCIGVLEKIDAG----LDAKAKKNKLAI-EEAIETYCTRKDIDNKEKKLCYFLKPIKRDVSQPFSTGMPKAKVCERLKKKSAEICTIKYPVKVDSQTDYSKLRVKELKAILSERGVECTGCLEKPDFIKKCEET 162 L +V A +GL+ VTSAAD K+CEVCI V+E + + L K KNKLA+ E+A+E ++K D KEKKL YFL+P+K+D ++ + G K+C+ L KK+ E C+I++P+K TDYSK+RVKELK IL ERG C GC+EK DFIK+ +ET Sbjct: 3 LFHVVVLALLGLSAVTSAADDKECEVCIKVIEDLKSTYSTMLAEKGGKNKLAVAEQALEKLVSKKKADPKEKKLFYFLEPMKKDAARQVTFGKETLKICQGLSKKNPEFCSIRFPIKAAKGTDYSKMRVKELKKILQERGENCNGCVEKSDFIKRLQET 161
BLAST of NO06G01160 vs. NCBI_GenBank
Match: XP_012201555.1 (hypothetical protein SPRG_07379 [Saprolegnia parasitica CBS 223.65] >KDO27780.1 hypothetical protein SPRG_07379 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 150.6 bits (379), Expect = 4.400e-33 Identity = 80/159 (50.31%), Postives = 107/159 (67.30%), Query Frame = 0 Query: 8 LLLALVAAFIGLATVTSAADPKDCEVCIGVLEKIDAG----LDAKAKKNKLAI-EEAIETYCTRKDIDNKEKKLCYFLKPIKRDVSQPFSTGMPKAKVCERLKKKSAEICTIKYPVKVDSQTDYSKLRVKELKAILSERGVECTGCLEKPDFIKKCEET 162 L +V A +GL+ V SAAD K+CEVCI V+E + + L K KNKLA+ E+A+E ++K D KEKKL YFL+P+K+D ++ + G K+C+ L KK+ E C+I+YP+K TDYSK+RVKELK IL ERG C GC EK DFIK+ +ET Sbjct: 3 LFHVVVLALLGLSGVASAADDKECEVCIKVIEDLKSTYSTMLADKGGKNKLAVAEQALEKLVSKKKADPKEKKLFYFLEPMKKDAARQVTFGKETLKICQGLSKKNPEFCSIRYPIKAAKGTDYSKMRVKELKKILQERGENCNGCAEKSDFIKRLQET 161 The following BLAST results are available for this feature:
BLAST of NO06G01160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G01160 ID=NO06G01160|Name=NO06G01160|organism=Nannochloropsis oceanica|type=gene|length=1890bpback to top protein sequence of NO06G01160.1 >NO06G01160.1-protein ID=NO06G01160.1-protein|Name=NO06G01160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=169bpback to top Synonyms
Publications
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