NO06G01150, NO06G01150 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G01150 vs. NCBI_GenBank
Match: XP_002176127.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >XP_002181283.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC42878.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC47206.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 86.7 bits (213), Expect = 9.700e-14 Identity = 40/87 (45.98%), Postives = 60/87 (68.97%), Query Frame = 0 Query: 104 KTSPKEKEKFEVEWRVLLHNDDVHTFDYVSRKLAEVVPTLTRSKAWECTLAAHSHDFSTIAIVTKTSAEEFCMKLQKEGLTISVAPD 191 +T P+E+++ E WRV+LHND+VHTF+YV R L +V+ TL R A+E + H +TI K AE+ C+ LQ++GLT+S++PD Sbjct: 1 ETLPEEQKRKEEMWRVVLHNDEVHTFNYVIRSLCKVIGTLDRKAAFEICVQTHGIGKATITKTWKKQAEQHCLGLQRQGLTVSISPD 87
BLAST of NO06G01150 vs. NCBI_GenBank
Match: XP_013228004.1 (ATP-dependent Clp protease adaptor domain-containing protein, putative [Eimeria tenella] >AET50543.1 hypothetical protein [Eimeria tenella] >CDJ37166.1 ATP-dependent Clp protease adaptor domain-containing protein, putative [Eimeria tenella]) HSP 1 Score: 86.3 bits (212), Expect = 1.300e-13 Identity = 46/132 (34.85%), Postives = 76/132 (57.58%), Query Frame = 0 Query: 71 PRLAALSMSDTGLGTGKQAK----GGVKVGVKEREATKTSPKEKEKFEVEWRVLLHNDDVHTFDYVSRKLAEVVPTLTRSKAWECTLAAHSHDFSTIAIVTKTSAEEFCMKLQKEGLTISVAPDSNFKKDGE 199 PR++ + +S L +Q + G +V + P+++ + EWRV+LHNDD+HTF+ V + + +P ++R++A++ L AH+ +TI + K A E + LQKEGLT+SV PD F KD + Sbjct: 182 PRISRIPLSTKQLKRAQQEEIQTVGDSQVKKDAALEDREGPEKRRQRVKEWRVVLHNDDIHTFECVENAITKTLPHISRARAYDIALHAHTTSKATIMLTWKEKAGEVALALQKEGLTVSVLPDRLFNKDSD 313
BLAST of NO06G01150 vs. NCBI_GenBank
Match: CDI86138.1 (ATP-dependent Clp protease adaptor domain-containing protein, putative [Eimeria praecox]) HSP 1 Score: 86.3 bits (212), Expect = 1.300e-13 Identity = 44/104 (42.31%), Postives = 67/104 (64.42%), Query Frame = 0 Query: 97 VKEREAT--KTSPKEKEKFEVEWRVLLHNDDVHTFDYVSRKLAEVVPTLTRSKAWECTLAAHSHDFSTIAIVTKTSAEEFCMKLQKEGLTISVAPDSNFKKDGE 199 VKEREA K +++ + +WRV+LHNDD+HTF+ V + +V+P ++R++A++ L AH++ +TI + + A E M LQ EGLT+SV PD F K E Sbjct: 23 VKEREAVEDKEGAEKRRQRVKDWRVVLHNDDIHTFECVEDAITKVLPHISRARAYDIALHAHTNSKATIMLTWEEKATEVAMALQGEGLTVSVLPDKLFNKQEE 126
BLAST of NO06G01150 vs. NCBI_GenBank
Match: XP_005832032.1 (hypothetical protein GUITHDRAFT_94819 [Guillardia theta CCMP2712] >EKX45052.1 hypothetical protein GUITHDRAFT_94819 [Guillardia theta CCMP2712]) HSP 1 Score: 83.2 bits (204), Expect = 1.100e-12 Identity = 48/108 (44.44%), Postives = 61/108 (56.48%), Query Frame = 0 Query: 88 QAKGGVKVGVKER-----EATKTSPKEKEKFEVEWRVLLHNDDVHTFDYVSRKLAEVVPTLTRSKAWECTLAAHSHDFSTIAIVTKTSAEEFCMKLQKEGLTISVAPD 191 Q GG V V + +A KE+ E WRVLLHNDDVHTFDYV + +VV T+TR KA T+ AH +T+ K A E+ + LQK GLT S+AP+ Sbjct: 83 QEGGGAGVAVLTKPPDLDKAADYEKKEQVDKEPIWRVLLHNDDVHTFDYVIDTIVKVVRTVTRKKAHRITMEAHKSGLATVTTTWKQLAREYSLGLQKAGLTSSIAPE 190
BLAST of NO06G01150 vs. NCBI_GenBank
Match: EJK64246.1 (hypothetical protein THAOC_15039, partial [Thalassiosira oceanica]) HSP 1 Score: 82.4 bits (202), Expect = 1.800e-12 Identity = 39/90 (43.33%), Postives = 59/90 (65.56%), Query Frame = 0 Query: 105 TSPKEKEKFEVEWRVLLHNDDVHTFDYVSRKLAEVVPTLTRSKAWECTLAAHSHDFSTIAIVTKTSAEEFCMKLQKEGLTISVAPDSNFK 195 T +E++ E WRV+LHND+VHTF+YV R L +V+ TL + KA++ H +T+ K A ++C+ LQ++GLT S+APDS F+ Sbjct: 27 TEMEEEDIPEEMWRVVLHNDEVHTFNYVIRSLQKVMGTLDKKKAFDICTVTHGIGQATVTSCWKEQAMKYCLGLQRQGLTASIAPDSKFE 116
BLAST of NO06G01150 vs. NCBI_GenBank
Match: EJK67659.1 (hypothetical protein THAOC_11279 [Thalassiosira oceanica]) HSP 1 Score: 82.4 bits (202), Expect = 1.800e-12 Identity = 39/90 (43.33%), Postives = 59/90 (65.56%), Query Frame = 0 Query: 105 TSPKEKEKFEVEWRVLLHNDDVHTFDYVSRKLAEVVPTLTRSKAWECTLAAHSHDFSTIAIVTKTSAEEFCMKLQKEGLTISVAPDSNFK 195 T +E++ E WRV+LHND+VHTF+YV R L +V+ TL + KA++ H +T+ K A ++C+ LQ++GLT S+APDS F+ Sbjct: 85 TEMEEEDIPEEMWRVVLHNDEVHTFNYVIRSLQKVMGTLDKKKAFDICTVTHGIGQATVTSCWKEQAMKYCLGLQRQGLTASIAPDSKFE 174
BLAST of NO06G01150 vs. NCBI_GenBank
Match: XP_002287774.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED95217.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 82.4 bits (202), Expect = 1.800e-12 Identity = 43/109 (39.45%), Postives = 65/109 (59.63%), Query Frame = 0 Query: 99 EREATKTSPKEKEKFEVEWRVLLHNDDVHTFDYVSRKLAEVVPTLTRSKAWECTLAAHSHDFSTIAIVTKTSAEEFCMKLQKEGLTISVAPDSNFKKDGEGGEGGGSQG 208 ++E T T +E + E WRV+LHND+VHTF+YV R L +V+ TL + KA + + H +T+ K A ++C+ +Q+ GLT S+AP+ F EGGG+ G Sbjct: 89 DKEETDTQMEEDDTPEEVWRVILHNDEVHTFNYVIRSLQKVIGTLDKKKAHDICVVTHGTGQATVTQCWKEQAMKYCVGMQRFGLTASIAPEGKF-------EGGGNDG 190
BLAST of NO06G01150 vs. NCBI_GenBank
Match: XP_766490.1 (hypothetical protein [Theileria parva strain Muguga] >EAN34207.1 hypothetical protein TP01_0969 [Theileria parva]) HSP 1 Score: 80.5 bits (197), Expect = 6.900e-12 Identity = 42/97 (43.30%), Postives = 61/97 (62.89%), Query Frame = 0 Query: 97 VKEREATKTSPKEKEKFEVE---WRVLLHNDDVHTFDYVSRKLAEVVPTLTRSKAWECTLAAHSHDFSTIAIVTKTSAEEFCMKLQKEGLTISVAPD 191 +KE+E T+TSP KE+ E E WRV+L+NDD+H F YV+ +++ VP L ++A TL AH + + I K AE++C +LQK GLT+ D Sbjct: 99 LKEKEVTQTSPGSKEEREKEVNSWRVILYNDDIHNFMYVTESISKCVPQLPLARAHLITLEAHKNGQAEIIRTWKDKAEQYCRELQKFGLTVCTIND 195
BLAST of NO06G01150 vs. NCBI_GenBank
Match: KOO30982.1 (ATP-dependent clp protease adaptor protein containing protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 80.5 bits (197), Expect = 6.900e-12 Identity = 38/83 (45.78%), Postives = 52/83 (62.65%), Query Frame = 0 Query: 108 KEKEKFEVEWRVLLHNDDVHTFDYVSRKLAEVVPTLTRSKAWECTLAAHSHDFSTIAIVTKTSAEEFCMKLQKEGLTISVAPD 191 KE + W+VLLHNDDVHTF+Y + + VV T+ R KA T+ AHS + + K A+EFC+ LQK GLT S++P+ Sbjct: 66 KEDVSLDANWKVLLHNDDVHTFEYCTGAICSVVRTIKRKKAHTITVQAHSMGTAVVTQTYKQKAKEFCLGLQKYGLTSSISPE 148
BLAST of NO06G01150 vs. NCBI_GenBank
Match: XP_001349940.1 (ATP-dependent Clp protease adapter protein ClpS [Plasmodium falciparum 3D7] >CAD52348.1 ATP-dependent Clp protease adapter protein ClpS [Plasmodium falciparum 3D7] >ETW40977.1 hypothetical protein PFNF135_04614 [Plasmodium falciparum NF135/5.C10] >KNG78050.1 ATP-dependent Clp protease adaptor protein ClpS containing protein [Plasmodium falciparum IGH-CR14] >KOB88892.1 hypothetical protein PFDG_03834 [Plasmodium falciparum Dd2] >PKC47298.1 ATP-dependent Clp protease adapter protein ClpS [Plasmodium falciparum NF54]) HSP 1 Score: 79.0 bits (193), Expect = 2.000e-11 Identity = 37/95 (38.95%), Postives = 61/95 (64.21%), Query Frame = 0 Query: 100 REATKTSPKEKEKFEVEWRVLLHNDDVHTFDYVSRKLAEVVPTLTRSKAWECTLAAHSHDFSTIAIVTKTSAEEFCMKLQKEGLTISVAPDSNFK 195 +EA + KE+EK W+V+L+NDD+H F YV+ + +VV ++++KA T+ AHS + I K+ AE++C +LQ+ GLT+S+ +S K Sbjct: 93 KEADEHEKKEREKETSAWKVILYNDDIHNFTYVTDVIVKVVGQISKAKAHTITVEAHSTGQALILSTWKSKAEKYCQELQQNGLTVSIIHESQLK 187 The following BLAST results are available for this feature:
BLAST of NO06G01150 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G01150 ID=NO06G01150|Name=NO06G01150|organism=Nannochloropsis oceanica|type=gene|length=1959bpback to top protein sequence of NO06G01150.1 >NO06G01150.1-protein ID=NO06G01150.1-protein|Name=NO06G01150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=211bpback to top Synonyms
Publications
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