NO06G01090, NO06G01090 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G01090 vs. NCBI_GenBank
Match: EWM26155.1 (Hrf1 [Nannochloropsis gaditana]) HSP 1 Score: 436.8 bits (1122), Expect = 7.000e-119 Identity = 269/311 (86.50%), Postives = 282/311 (90.68%), Query Frame = 0 Query: 65 VNVFNPGAYK-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGRHPGGQQNMDFGLDAITAAANSQAFSMGVGMGQDYLNASVNRYIPWFTSVWQGLKYYFAVNHHYVKRKLFTLVFPFRKRHWRREAKDDGDVGVGG--GGQIGSSSGGVGGGRPHYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTKNSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPASLLDLLAVTGYKYVALNINMLLGLNLGSRIYLAVMIYTGLAMAYFSLKTFAQAVRLAGPRDLASAPVRVELMVLGFALLQFFS 373 VNVFNPGAYK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFG+ G Q NMDFGL+AITAAANSQAFSMGVGMGQ+YLNASV+RY PW TSVW GLKYYFAVNHHYVKRKLFTLVFP+RKRHWRR+ KD G G G G Q G++ RP YQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTKNSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPA+LLDLLAVTGYKYVALN NM+LGLNLG R+YLA M+YTGLAMAYFSLKTFAQAVRLAGPRDLASAPVRVELMVLGFAL+QFFS Sbjct: 45 VNVFNPGAYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGQ--GHQPNMDFGLNAITAAANSQAFSMGVGMGQEYLNASVSRYTPWVTSVWHGLKYYFAVNHHYVKRKLFTLVFPYRKRHWRRQMKDSGAAGSSGAYGQQGGNADSASAMYRPQYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTKNSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPATLLDLLAVTGYKYVALNFNMVLGLNLGPRVYLAAMVYTGLAMAYFSLKTFAQAVRLAGPRDLASAPVRVELMVLGFALMQFFS 353
BLAST of NO06G01090 vs. NCBI_GenBank
Match: CBJ25787.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 185.3 bits (469), Expect = 3.700e-43 Identity = 114/263 (43.35%), Postives = 157/263 (59.70%), Query Frame = 0 Query: 127 NSQAFSMGVGMGQDYLNASVNRYIPWFTSVWQGLKYYFAVNHHYVKRKLFTLVFPFRKRHWRR-----EAKDDGDVGVGGGGQIGSSSGGVGGGRPHYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGT-------KNSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPASLLDLLAVTGYKYVALNINMLLGLNLGSRIYLAVMIYTGLAMAYFSLKTFAQAVRLAGPRDLASAPVRVELMVLGFALLQFFSVWWLG 378 N+Q ++G + ++L ++V +Y P + W LK YF V++ YV +KL L+ K+ W R E KDD GRP ++ P+ D NAPDLY+PLM+F+T+VL+TGYAKG+ +F+PEVL EVTSSC+V QLLE+ +IRLGLYLL +PA +LDL+A TGYKYV L INM +G+ G Y +++TG M++F KT A V P AS E+M+LGFA LQF S+ +G Sbjct: 65 NAQMLNVGGNVASNFLKSNVAQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWFRLPSEDEVKDD-------------------QGRPKFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAALSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLVAYTGYKYVGLCINMTVGVFSGKTWYYLALLWTGSMMSFFMFKTMAHTV----PTGSASR----EVMILGFAPLQFLSMGGVG 300
BLAST of NO06G01090 vs. NCBI_GenBank
Match: POM78004.1 (membrane protein [Phytophthora palmivora var. palmivora]) HSP 1 Score: 174.5 bits (441), Expect = 6.500e-40 Identity = 106/282 (37.59%), Postives = 154/282 (54.61%), Query Frame = 0 Query: 107 RHPGGQQNMDFGLDAITAAANSQAFSMGVGMGQDYLNASVNRYIPWFTSVWQGLKYYFAVNHHYVKRKLFTLVFPFRKRHWRREAKDDGDVGVGGGGQIGSSSGGVGGGRPHYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTKNSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPASLLDLLAVTGYKYVALNINMLLGLNLGSRIYLAVMIYTGLAMAYFSLKTFAQAVRLAGPRDLASAPVRVELMVLGFALLQFFSVWWLGYS---GDLKTM 386 +HP Q DF + +++ + + QD+L Y+P VW LKYYF VN+ YVK +L L+ PFR ++WRR +G G Q S Y P D NAPDLYIPLM F+TY+L+ GY+KGT N F+P+V+ + S CLVMQL+EI V+ LY+L + S LDL++ +GYKY+ L IN ++ LGS Y ++YTG+A++YF+L +V P + ++ G + LQ V W+ Y+ GD++ M Sbjct: 102 QHPQQGQQPDF----MNQFSSNPMAGLAMNSAQDFLQKQSEMYLPGAYGVWGSLKYYFTVNNSYVKSRLKILLLPFRHKNWRR---------MGNGEQDESKP-------MQYAPPTRDSNAPDLYIPLMGFLTYILIVGYSKGTSNQFSPDVITKDASYCLVMQLIEIGVLAACLYVLNSSISFLDLVSFSGYKYIPLVINAVVFQLLGSIAYYVSLLYTGVAVSYFTLNCMKGSVAEPSPENRLFR----NYLLFGVSCLQLILVCWISYTTAPGDMRVM 359
BLAST of NO06G01090 vs. NCBI_GenBank
Match: XP_009041673.1 (hypothetical protein AURANDRAFT_33780 [Aureococcus anophagefferens] >EGB03597.1 hypothetical protein AURANDRAFT_33780 [Aureococcus anophagefferens]) HSP 1 Score: 173.3 bits (438), Expect = 1.500e-39 Identity = 105/232 (45.26%), Postives = 148/232 (63.79%), Query Frame = 0 Query: 149 YIPWFTSVWQGLKYYFAVNHHYVKRKLFTLVFPFRKRHWRREAKDDGDVGVGGGGQIGSSSGGVGGGRPHYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTKNSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQA-PASLLDLLAVTGYKYVALNINMLLGLNLGSRIYLAVMIYTGLAMAYFSLKTFAQAVRLAGPRDLASAPVRVELMVLGFALLQFFSVWWLGYS 380 ++P + W L+ YFAV+H V KL ++FPF K+ WRR+ ++ D GGG + +G + G + +P+ D+NAPD Y+PL+AFVT+ LV GY +G++ +FTPEVL + S C +Q+LEIA+ LGLYLL A +LD+ TGYKYVAL+IN + G R Y A + +TGL+ +YF LKT AQAV P +L S+ R E++VL F +LQ S+W LG S Sbjct: 24 WLPGVAAFWASLRVYFAVSHASVAGKLRAVLFPFAKKQWRRKRAEELD----GGGD--ARAGALHG----HALPLEDDNAPDGYVPLVAFVTFALVAGYVRGSRGTFTPEVLASIFSWCAGLQMLEIALYSLGLYLLGAHNVPVLDVACFTGYKYVALSINAIAHFFGGERAYYAALFWTGLSASYFMLKTMAQAV----PAELESSAARREIVVLVFGVLQGLSIWVLGRS 241
BLAST of NO06G01090 vs. NCBI_GenBank
Match: XP_008910091.1 (hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >ETN04697.1 hypothetical protein, variant 2 [Phytophthora parasitica INRA-310]) HSP 1 Score: 172.6 bits (436), Expect = 2.500e-39 Identity = 103/273 (37.73%), Postives = 149/273 (54.58%), Query Frame = 0 Query: 107 RHPGGQQNMDFGLDAITAAANSQAFSMGVGMGQDYLNASVNRYIPWFTSVWQGLKYYFAVNHHYVKRKLFTLVFPFRKRHWRREAKDDGDVGVGGGGQIGSSSGGVGGGRPHYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTKNSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPASLLDLLAVTGYKYVALNINMLLGLNLGSRIYLAVMIYTGLAMAYFSLKTFAQAVRLAGPRDLASAPVRVELMVLGFALLQFFSVWWLGYS 380 +HP Q DF I +++ + + QD+L Y+P +W LKYYF VN+ YVK +L L+ PFR ++WRR +G G Q S Y P D NAPDLYIPLM F+TY+L+ GY+KGT N F+P+V+ + S CLVMQL+EI V+ LY+L + S LDL++ +GYKY+ L IN ++ LGS Y ++YTG+A++YF+L +V P + ++ G + LQ V W+ Y+ Sbjct: 157 QHPQQAQQADF----INQFSSNPMAGLAMNSAQDFLQKQSEMYLPGAYGIWGSLKYYFTVNNSYVKSRLKILLLPFRHKNWRR---------IGNGEQDESKP-------MQYAPPTRDSNAPDLYIPLMGFLTYILLVGYSKGTSNQFSPDVITKDASYCLVMQLIEIGVLAACLYVLNSSISFLDLVSFSGYKYIPLVINAVVFQLLGSIAYYVFLLYTGVAVSYFTLNCMKGSVAEPSPENRLFR----NYLLFGVSCLQLILVCWISYT 405
BLAST of NO06G01090 vs. NCBI_GenBank
Match: ETI40050.1 (hypothetical protein F443_14443 [Phytophthora parasitica P1569] >ETK80149.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETL33570.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETM40035.1 hypothetical protein L914_13899 [Phytophthora parasitica] >ETO68785.1 hypothetical protein F444_14441 [Phytophthora parasitica P1976] >ETP09866.1 hypothetical protein, variant 2 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 172.2 bits (435), Expect = 3.200e-39 Identity = 103/273 (37.73%), Postives = 149/273 (54.58%), Query Frame = 0 Query: 107 RHPGGQQNMDFGLDAITAAANSQAFSMGVGMGQDYLNASVNRYIPWFTSVWQGLKYYFAVNHHYVKRKLFTLVFPFRKRHWRREAKDDGDVGVGGGGQIGSSSGGVGGGRPHYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTKNSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPASLLDLLAVTGYKYVALNINMLLGLNLGSRIYLAVMIYTGLAMAYFSLKTFAQAVRLAGPRDLASAPVRVELMVLGFALLQFFSVWWLGYS 380 +HP Q DF I +++ + + QD+L Y+P +W LKYYF VN+ YVK +L L+ PFR ++WRR +G G Q S Y P D NAPDLYIPLM F+TY+L+ GY+KGT N F+P+V+ + S CLVMQL+EI V+ LY+L + S LDL++ +GYKY+ L IN ++ LGS Y ++YTG+A++YF+L +V P + ++ G + LQ V W+ Y+ Sbjct: 157 QHPQQAQQADF----INQFSSNPMAGLAMNSAQDFLQKQSEMYLPGAYGIWGSLKYYFTVNNSYVKSRLKILLLPFRHKNWRR---------IGNGEQDESKP-------MQYAPPTRDSNAPDLYIPLMGFLTYILLVGYSKGTSNQFSPDVITKDASYCLVMQLIEIGVLAACLYVLNSSISFLDLVSFSGYKYIPLVINAVVFQLLGSIAYYVSLLYTGVAVSYFTLNCMKGSVAEPSPENRLFR----NYLLFGVSCLQLILVCWISYT 405
BLAST of NO06G01090 vs. NCBI_GenBank
Match: ETP37972.1 (hypothetical protein, variant 2 [Phytophthora parasitica P10297]) HSP 1 Score: 172.2 bits (435), Expect = 3.200e-39 Identity = 103/273 (37.73%), Postives = 149/273 (54.58%), Query Frame = 0 Query: 107 RHPGGQQNMDFGLDAITAAANSQAFSMGVGMGQDYLNASVNRYIPWFTSVWQGLKYYFAVNHHYVKRKLFTLVFPFRKRHWRREAKDDGDVGVGGGGQIGSSSGGVGGGRPHYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTKNSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPASLLDLLAVTGYKYVALNINMLLGLNLGSRIYLAVMIYTGLAMAYFSLKTFAQAVRLAGPRDLASAPVRVELMVLGFALLQFFSVWWLGYS 380 +HP Q DF I +++ + + QD+L Y+P +W LKYYF VN+ YVK +L L+ PFR ++WRR +G G Q S Y P D NAPDLYIPLM F+TY+L+ GY+KGT N F+P+V+ + S CLVMQL+EI V+ LY+L + S LDL++ +GYKY+ L IN ++ LGS Y ++YTG+A++YF+L +V P + ++ G + LQ V W+ Y+ Sbjct: 157 QHPQQAQQADF----INQFSSNPMAGLAMNSAQDFLQKQSEMYLPGAYGIWGSLKYYFTVNNSYVKSRLKILLLPFRHKNWRR---------IGNGEQDESKP-------MQYAPPTRDSNAPDLYIPLMGFLTYILLVGYSKGTSNQFSPDVITKDASYCLVMQLIEIGVLAACLYVLNSSISFLDLVSFSGYKYIPLVINAVVFQLLGSIAYYVSLLYTGVAVSYFTLNCMKGSVAEPSPENRLFR----NYLLFGVSCLQLILVCWISYT 405
BLAST of NO06G01090 vs. NCBI_GenBank
Match: KUF85000.1 (YIF1B protein [Phytophthora nicotianae]) HSP 1 Score: 172.2 bits (435), Expect = 3.200e-39 Identity = 103/273 (37.73%), Postives = 149/273 (54.58%), Query Frame = 0 Query: 107 RHPGGQQNMDFGLDAITAAANSQAFSMGVGMGQDYLNASVNRYIPWFTSVWQGLKYYFAVNHHYVKRKLFTLVFPFRKRHWRREAKDDGDVGVGGGGQIGSSSGGVGGGRPHYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTKNSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPASLLDLLAVTGYKYVALNINMLLGLNLGSRIYLAVMIYTGLAMAYFSLKTFAQAVRLAGPRDLASAPVRVELMVLGFALLQFFSVWWLGYS 380 +HP Q DF I +++ + + QD+L Y+P +W LKYYF VN+ YVK +L L+ PFR ++WRR +G G Q S Y P D NAPDLYIPLM F+TY+L+ GY+KGT N F+P+V+ + S CLVMQL+EI V+ LY+L + S LDL++ +GYKY+ L IN ++ LGS Y ++YTG+A++YF+L +V P + ++ G + LQ V W+ Y+ Sbjct: 157 QHPQQAQQADF----INQFSSNPMAGLAMNSAQDFLQKQSEMYLPGAYGIWGSLKYYFTVNNSYVKSRLKILLLPFRHKNWRR---------IGNGEQDESKP-------MQYAPPTRDSNAPDLYIPLMGFLTYILLVGYSKGTSNQFSPDVITKDASYCLVMQLIEIGVLAACLYVLNSSISFLDLVSFSGYKYIPLVINAVVFQLLGSIAYYVSLLYTGVAVSYFTLNCMKGSVAEPSPENRLFR----NYLLFGVSCLQLILVCWISYT 405
BLAST of NO06G01090 vs. NCBI_GenBank
Match: ETL86870.1 (hypothetical protein, variant 2 [Phytophthora parasitica]) HSP 1 Score: 171.8 bits (434), Expect = 4.200e-39 Identity = 102/273 (37.36%), Postives = 149/273 (54.58%), Query Frame = 0 Query: 107 RHPGGQQNMDFGLDAITAAANSQAFSMGVGMGQDYLNASVNRYIPWFTSVWQGLKYYFAVNHHYVKRKLFTLVFPFRKRHWRREAKDDGDVGVGGGGQIGSSSGGVGGGRPHYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTKNSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPASLLDLLAVTGYKYVALNINMLLGLNLGSRIYLAVMIYTGLAMAYFSLKTFAQAVRLAGPRDLASAPVRVELMVLGFALLQFFSVWWLGYS 380 +HP Q DF I +++ + + QD+L Y+P +W LKYYF VN+ YVK +L L+ PFR ++WRR +G G Q S Y P D NAPDLYIPLM F+TY+L+ GY+KGT N F+P+V+ + S CLVMQ++EI V+ LY+L + S LDL++ +GYKY+ L IN ++ LGS Y ++YTG+A++YF+L +V P + ++ G + LQ V W+ Y+ Sbjct: 157 QHPQQAQQADF----INQFSSNPMAGLAMNSAQDFLQKQSEMYLPGAYGIWGSLKYYFTVNNSYVKSRLKILLLPFRHKNWRR---------IGNGEQDESKP-------MQYAPPTRDSNAPDLYIPLMGFLTYILLVGYSKGTSNQFSPDVITKDASYCLVMQMIEIGVLAACLYVLNSSISFLDLVSFSGYKYIPLVINAVVFQLLGSIAYYVFLLYTGVAVSYFTLNCMKGSVAEPSPENRLFR----NYLLFGVSCLQLILVCWISYT 405
BLAST of NO06G01090 vs. NCBI_GenBank
Match: XP_008910089.1 (hypothetical protein PPTG_14505 [Phytophthora parasitica INRA-310] >ETN04695.1 hypothetical protein PPTG_14505 [Phytophthora parasitica INRA-310]) HSP 1 Score: 170.6 bits (431), Expect = 9.400e-39 Identity = 99/259 (38.22%), Postives = 143/259 (55.21%), Query Frame = 0 Query: 121 AITAAANSQAFSMGVGMGQDYLNASVNRYIPWFTSVWQGLKYYFAVNHHYVKRKLFTLVFPFRKRHWRREAKDDGDVGVGGGGQIGSSSGGVGGGRPHYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTKNSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPASLLDLLAVTGYKYVALNINMLLGLNLGSRIYLAVMIYTGLAMAYFSLKTFAQAVRLAGPRDLASAPVRVELMVLGFALLQFFSVWWLGYS 380 A A ++ + + QD+L Y+P +W LKYYF VN+ YVK +L L+ PFR ++WRR +G G Q S Y P D NAPDLYIPLM F+TY+L+ GY+KGT N F+P+V+ + S CLVMQL+EI V+ LY+L + S LDL++ +GYKY+ L IN ++ LGS Y ++YTG+A++YF+L +V P + ++ G + LQ V W+ Y+ Sbjct: 189 AFAAGGSNPMAGLAMNSAQDFLQKQSEMYLPGAYGIWGSLKYYFTVNNSYVKSRLKILLLPFRHKNWRR---------IGNGEQDESKP-------MQYAPPTRDSNAPDLYIPLMGFLTYILLVGYSKGTSNQFSPDVITKDASYCLVMQLIEIGVLAACLYVLNSSISFLDLVSFSGYKYIPLVINAVVFQLLGSIAYYVFLLYTGVAVSYFTLNCMKGSVAEPSPENRLFR----NYLLFGVSCLQLILVCWISYT 427 The following BLAST results are available for this feature:
BLAST of NO06G01090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G01090 ID=NO06G01090|Name=NO06G01090|organism=Nannochloropsis oceanica|type=gene|length=1170bpback to top protein sequence of NO06G01090.1 >NO06G01090.1-protein ID=NO06G01090.1-protein|Name=NO06G01090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=390bpback to top Synonyms
Publications
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