NO06G01090, NO06G01090 (gene) Nannochloropsis oceanica

Overview
NameNO06G01090
Unique NameNO06G01090
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1170
Alignment locationchr6:351283..352452 -

Link to JBrowse

Properties
Property NameValue
DescriptionHrf1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:351283..352452 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005578Hrf1
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO06G01090 vs. NCBI_GenBank
Match: EWM26155.1 (Hrf1 [Nannochloropsis gaditana])

HSP 1 Score: 436.8 bits (1122), Expect = 7.000e-119
Identity = 269/311 (86.50%), Postives = 282/311 (90.68%), Query Frame = 0
Query:   65 VNVFNPGAYK-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGRHPGGQQNMDFGLDAITAAANSQAFSMGVGMGQDYLNASVNRYIPWFTSVWQGLKYYFAVNHHYVKRKLFTLVFPFRKRHWRREAKDDGDVGVGG--GGQIGSSSGGVGGGRPHYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTKNSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPASLLDLLAVTGYKYVALNINMLLGLNLGSRIYLAVMIYTGLAMAYFSLKTFAQAVRLAGPRDLASAPVRVELMVLGFALLQFFS 373
            VNVFNPGAYK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFG+  G Q NMDFGL+AITAAANSQAFSMGVGMGQ+YLNASV+RY PW TSVW GLKYYFAVNHHYVKRKLFTLVFP+RKRHWRR+ KD G  G  G  G Q G++       RP YQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTKNSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPA+LLDLLAVTGYKYVALN NM+LGLNLG R+YLA M+YTGLAMAYFSLKTFAQAVRLAGPRDLASAPVRVELMVLGFAL+QFFS
Sbjct:   45 VNVFNPGAYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGQ--GHQPNMDFGLNAITAAANSQAFSMGVGMGQEYLNASVSRYTPWVTSVWHGLKYYFAVNHHYVKRKLFTLVFPYRKRHWRRQMKDSGAAGSSGAYGQQGGNADSASAMYRPQYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTKNSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPATLLDLLAVTGYKYVALNFNMVLGLNLGPRVYLAAMVYTGLAMAYFSLKTFAQAVRLAGPRDLASAPVRVELMVLGFALMQFFS 353          
BLAST of NO06G01090 vs. NCBI_GenBank
Match: CBJ25787.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 185.3 bits (469), Expect = 3.700e-43
Identity = 114/263 (43.35%), Postives = 157/263 (59.70%), Query Frame = 0
Query:  127 NSQAFSMGVGMGQDYLNASVNRYIPWFTSVWQGLKYYFAVNHHYVKRKLFTLVFPFRKRHWRR-----EAKDDGDVGVGGGGQIGSSSGGVGGGRPHYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGT-------KNSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPASLLDLLAVTGYKYVALNINMLLGLNLGSRIYLAVMIYTGLAMAYFSLKTFAQAVRLAGPRDLASAPVRVELMVLGFALLQFFSVWWLG 378
            N+Q  ++G  +  ++L ++V +Y P  +  W  LK YF V++ YV +KL  L+    K+ W R     E KDD                    GRP ++ P+ D NAPDLY+PLM+F+T+VL+TGYAKG+         +F+PEVL EVTSSC+V QLLE+ +IRLGLYLL +PA +LDL+A TGYKYV L INM +G+  G   Y   +++TG  M++F  KT A  V    P   AS     E+M+LGFA LQF S+  +G
Sbjct:   65 NAQMLNVGGNVASNFLKSNVAQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWFRLPSEDEVKDD-------------------QGRPKFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAALSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLVAYTGYKYVGLCINMTVGVFSGKTWYYLALLWTGSMMSFFMFKTMAHTV----PTGSASR----EVMILGFAPLQFLSMGGVG 300          
BLAST of NO06G01090 vs. NCBI_GenBank
Match: POM78004.1 (membrane protein [Phytophthora palmivora var. palmivora])

HSP 1 Score: 174.5 bits (441), Expect = 6.500e-40
Identity = 106/282 (37.59%), Postives = 154/282 (54.61%), Query Frame = 0
Query:  107 RHPGGQQNMDFGLDAITAAANSQAFSMGVGMGQDYLNASVNRYIPWFTSVWQGLKYYFAVNHHYVKRKLFTLVFPFRKRHWRREAKDDGDVGVGGGGQIGSSSGGVGGGRPHYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTKNSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPASLLDLLAVTGYKYVALNINMLLGLNLGSRIYLAVMIYTGLAMAYFSLKTFAQAVRLAGPRDLASAPVRVELMVLGFALLQFFSVWWLGYS---GDLKTM 386
            +HP   Q  DF    +   +++    + +   QD+L      Y+P    VW  LKYYF VN+ YVK +L  L+ PFR ++WRR         +G G Q  S           Y  P  D NAPDLYIPLM F+TY+L+ GY+KGT N F+P+V+ +  S CLVMQL+EI V+   LY+L +  S LDL++ +GYKY+ L IN ++   LGS  Y   ++YTG+A++YF+L     +V    P +          ++ G + LQ   V W+ Y+   GD++ M
Sbjct:  102 QHPQQGQQPDF----MNQFSSNPMAGLAMNSAQDFLQKQSEMYLPGAYGVWGSLKYYFTVNNSYVKSRLKILLLPFRHKNWRR---------MGNGEQDESKP-------MQYAPPTRDSNAPDLYIPLMGFLTYILIVGYSKGTSNQFSPDVITKDASYCLVMQLIEIGVLAACLYVLNSSISFLDLVSFSGYKYIPLVINAVVFQLLGSIAYYVSLLYTGVAVSYFTLNCMKGSVAEPSPENRLFR----NYLLFGVSCLQLILVCWISYTTAPGDMRVM 359          
BLAST of NO06G01090 vs. NCBI_GenBank
Match: XP_009041673.1 (hypothetical protein AURANDRAFT_33780 [Aureococcus anophagefferens] >EGB03597.1 hypothetical protein AURANDRAFT_33780 [Aureococcus anophagefferens])

HSP 1 Score: 173.3 bits (438), Expect = 1.500e-39
Identity = 105/232 (45.26%), Postives = 148/232 (63.79%), Query Frame = 0
Query:  149 YIPWFTSVWQGLKYYFAVNHHYVKRKLFTLVFPFRKRHWRREAKDDGDVGVGGGGQIGSSSGGVGGGRPHYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTKNSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQA-PASLLDLLAVTGYKYVALNINMLLGLNLGSRIYLAVMIYTGLAMAYFSLKTFAQAVRLAGPRDLASAPVRVELMVLGFALLQFFSVWWLGYS 380
            ++P   + W  L+ YFAV+H  V  KL  ++FPF K+ WRR+  ++ D    GGG   + +G + G    + +P+ D+NAPD Y+PL+AFVT+ LV GY +G++ +FTPEVL  + S C  +Q+LEIA+  LGLYLL A    +LD+   TGYKYVAL+IN +     G R Y A + +TGL+ +YF LKT AQAV    P +L S+  R E++VL F +LQ  S+W LG S
Sbjct:   24 WLPGVAAFWASLRVYFAVSHASVAGKLRAVLFPFAKKQWRRKRAEELD----GGGD--ARAGALHG----HALPLEDDNAPDGYVPLVAFVTFALVAGYVRGSRGTFTPEVLASIFSWCAGLQMLEIALYSLGLYLLGAHNVPVLDVACFTGYKYVALSINAIAHFFGGERAYYAALFWTGLSASYFMLKTMAQAV----PAELESSAARREIVVLVFGVLQGLSIWVLGRS 241          
BLAST of NO06G01090 vs. NCBI_GenBank
Match: XP_008910091.1 (hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >ETN04697.1 hypothetical protein, variant 2 [Phytophthora parasitica INRA-310])

HSP 1 Score: 172.6 bits (436), Expect = 2.500e-39
Identity = 103/273 (37.73%), Postives = 149/273 (54.58%), Query Frame = 0
Query:  107 RHPGGQQNMDFGLDAITAAANSQAFSMGVGMGQDYLNASVNRYIPWFTSVWQGLKYYFAVNHHYVKRKLFTLVFPFRKRHWRREAKDDGDVGVGGGGQIGSSSGGVGGGRPHYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTKNSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPASLLDLLAVTGYKYVALNINMLLGLNLGSRIYLAVMIYTGLAMAYFSLKTFAQAVRLAGPRDLASAPVRVELMVLGFALLQFFSVWWLGYS 380
            +HP   Q  DF    I   +++    + +   QD+L      Y+P    +W  LKYYF VN+ YVK +L  L+ PFR ++WRR         +G G Q  S           Y  P  D NAPDLYIPLM F+TY+L+ GY+KGT N F+P+V+ +  S CLVMQL+EI V+   LY+L +  S LDL++ +GYKY+ L IN ++   LGS  Y   ++YTG+A++YF+L     +V    P +          ++ G + LQ   V W+ Y+
Sbjct:  157 QHPQQAQQADF----INQFSSNPMAGLAMNSAQDFLQKQSEMYLPGAYGIWGSLKYYFTVNNSYVKSRLKILLLPFRHKNWRR---------IGNGEQDESKP-------MQYAPPTRDSNAPDLYIPLMGFLTYILLVGYSKGTSNQFSPDVITKDASYCLVMQLIEIGVLAACLYVLNSSISFLDLVSFSGYKYIPLVINAVVFQLLGSIAYYVFLLYTGVAVSYFTLNCMKGSVAEPSPENRLFR----NYLLFGVSCLQLILVCWISYT 405          
BLAST of NO06G01090 vs. NCBI_GenBank
Match: ETI40050.1 (hypothetical protein F443_14443 [Phytophthora parasitica P1569] >ETK80149.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETL33570.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETM40035.1 hypothetical protein L914_13899 [Phytophthora parasitica] >ETO68785.1 hypothetical protein F444_14441 [Phytophthora parasitica P1976] >ETP09866.1 hypothetical protein, variant 2 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 172.2 bits (435), Expect = 3.200e-39
Identity = 103/273 (37.73%), Postives = 149/273 (54.58%), Query Frame = 0
Query:  107 RHPGGQQNMDFGLDAITAAANSQAFSMGVGMGQDYLNASVNRYIPWFTSVWQGLKYYFAVNHHYVKRKLFTLVFPFRKRHWRREAKDDGDVGVGGGGQIGSSSGGVGGGRPHYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTKNSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPASLLDLLAVTGYKYVALNINMLLGLNLGSRIYLAVMIYTGLAMAYFSLKTFAQAVRLAGPRDLASAPVRVELMVLGFALLQFFSVWWLGYS 380
            +HP   Q  DF    I   +++    + +   QD+L      Y+P    +W  LKYYF VN+ YVK +L  L+ PFR ++WRR         +G G Q  S           Y  P  D NAPDLYIPLM F+TY+L+ GY+KGT N F+P+V+ +  S CLVMQL+EI V+   LY+L +  S LDL++ +GYKY+ L IN ++   LGS  Y   ++YTG+A++YF+L     +V    P +          ++ G + LQ   V W+ Y+
Sbjct:  157 QHPQQAQQADF----INQFSSNPMAGLAMNSAQDFLQKQSEMYLPGAYGIWGSLKYYFTVNNSYVKSRLKILLLPFRHKNWRR---------IGNGEQDESKP-------MQYAPPTRDSNAPDLYIPLMGFLTYILLVGYSKGTSNQFSPDVITKDASYCLVMQLIEIGVLAACLYVLNSSISFLDLVSFSGYKYIPLVINAVVFQLLGSIAYYVSLLYTGVAVSYFTLNCMKGSVAEPSPENRLFR----NYLLFGVSCLQLILVCWISYT 405          
BLAST of NO06G01090 vs. NCBI_GenBank
Match: ETP37972.1 (hypothetical protein, variant 2 [Phytophthora parasitica P10297])

HSP 1 Score: 172.2 bits (435), Expect = 3.200e-39
Identity = 103/273 (37.73%), Postives = 149/273 (54.58%), Query Frame = 0
Query:  107 RHPGGQQNMDFGLDAITAAANSQAFSMGVGMGQDYLNASVNRYIPWFTSVWQGLKYYFAVNHHYVKRKLFTLVFPFRKRHWRREAKDDGDVGVGGGGQIGSSSGGVGGGRPHYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTKNSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPASLLDLLAVTGYKYVALNINMLLGLNLGSRIYLAVMIYTGLAMAYFSLKTFAQAVRLAGPRDLASAPVRVELMVLGFALLQFFSVWWLGYS 380
            +HP   Q  DF    I   +++    + +   QD+L      Y+P    +W  LKYYF VN+ YVK +L  L+ PFR ++WRR         +G G Q  S           Y  P  D NAPDLYIPLM F+TY+L+ GY+KGT N F+P+V+ +  S CLVMQL+EI V+   LY+L +  S LDL++ +GYKY+ L IN ++   LGS  Y   ++YTG+A++YF+L     +V    P +          ++ G + LQ   V W+ Y+
Sbjct:  157 QHPQQAQQADF----INQFSSNPMAGLAMNSAQDFLQKQSEMYLPGAYGIWGSLKYYFTVNNSYVKSRLKILLLPFRHKNWRR---------IGNGEQDESKP-------MQYAPPTRDSNAPDLYIPLMGFLTYILLVGYSKGTSNQFSPDVITKDASYCLVMQLIEIGVLAACLYVLNSSISFLDLVSFSGYKYIPLVINAVVFQLLGSIAYYVSLLYTGVAVSYFTLNCMKGSVAEPSPENRLFR----NYLLFGVSCLQLILVCWISYT 405          
BLAST of NO06G01090 vs. NCBI_GenBank
Match: KUF85000.1 (YIF1B protein [Phytophthora nicotianae])

HSP 1 Score: 172.2 bits (435), Expect = 3.200e-39
Identity = 103/273 (37.73%), Postives = 149/273 (54.58%), Query Frame = 0
Query:  107 RHPGGQQNMDFGLDAITAAANSQAFSMGVGMGQDYLNASVNRYIPWFTSVWQGLKYYFAVNHHYVKRKLFTLVFPFRKRHWRREAKDDGDVGVGGGGQIGSSSGGVGGGRPHYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTKNSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPASLLDLLAVTGYKYVALNINMLLGLNLGSRIYLAVMIYTGLAMAYFSLKTFAQAVRLAGPRDLASAPVRVELMVLGFALLQFFSVWWLGYS 380
            +HP   Q  DF    I   +++    + +   QD+L      Y+P    +W  LKYYF VN+ YVK +L  L+ PFR ++WRR         +G G Q  S           Y  P  D NAPDLYIPLM F+TY+L+ GY+KGT N F+P+V+ +  S CLVMQL+EI V+   LY+L +  S LDL++ +GYKY+ L IN ++   LGS  Y   ++YTG+A++YF+L     +V    P +          ++ G + LQ   V W+ Y+
Sbjct:  157 QHPQQAQQADF----INQFSSNPMAGLAMNSAQDFLQKQSEMYLPGAYGIWGSLKYYFTVNNSYVKSRLKILLLPFRHKNWRR---------IGNGEQDESKP-------MQYAPPTRDSNAPDLYIPLMGFLTYILLVGYSKGTSNQFSPDVITKDASYCLVMQLIEIGVLAACLYVLNSSISFLDLVSFSGYKYIPLVINAVVFQLLGSIAYYVSLLYTGVAVSYFTLNCMKGSVAEPSPENRLFR----NYLLFGVSCLQLILVCWISYT 405          
BLAST of NO06G01090 vs. NCBI_GenBank
Match: ETL86870.1 (hypothetical protein, variant 2 [Phytophthora parasitica])

HSP 1 Score: 171.8 bits (434), Expect = 4.200e-39
Identity = 102/273 (37.36%), Postives = 149/273 (54.58%), Query Frame = 0
Query:  107 RHPGGQQNMDFGLDAITAAANSQAFSMGVGMGQDYLNASVNRYIPWFTSVWQGLKYYFAVNHHYVKRKLFTLVFPFRKRHWRREAKDDGDVGVGGGGQIGSSSGGVGGGRPHYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTKNSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPASLLDLLAVTGYKYVALNINMLLGLNLGSRIYLAVMIYTGLAMAYFSLKTFAQAVRLAGPRDLASAPVRVELMVLGFALLQFFSVWWLGYS 380
            +HP   Q  DF    I   +++    + +   QD+L      Y+P    +W  LKYYF VN+ YVK +L  L+ PFR ++WRR         +G G Q  S           Y  P  D NAPDLYIPLM F+TY+L+ GY+KGT N F+P+V+ +  S CLVMQ++EI V+   LY+L +  S LDL++ +GYKY+ L IN ++   LGS  Y   ++YTG+A++YF+L     +V    P +          ++ G + LQ   V W+ Y+
Sbjct:  157 QHPQQAQQADF----INQFSSNPMAGLAMNSAQDFLQKQSEMYLPGAYGIWGSLKYYFTVNNSYVKSRLKILLLPFRHKNWRR---------IGNGEQDESKP-------MQYAPPTRDSNAPDLYIPLMGFLTYILLVGYSKGTSNQFSPDVITKDASYCLVMQMIEIGVLAACLYVLNSSISFLDLVSFSGYKYIPLVINAVVFQLLGSIAYYVFLLYTGVAVSYFTLNCMKGSVAEPSPENRLFR----NYLLFGVSCLQLILVCWISYT 405          
BLAST of NO06G01090 vs. NCBI_GenBank
Match: XP_008910089.1 (hypothetical protein PPTG_14505 [Phytophthora parasitica INRA-310] >ETN04695.1 hypothetical protein PPTG_14505 [Phytophthora parasitica INRA-310])

HSP 1 Score: 170.6 bits (431), Expect = 9.400e-39
Identity = 99/259 (38.22%), Postives = 143/259 (55.21%), Query Frame = 0
Query:  121 AITAAANSQAFSMGVGMGQDYLNASVNRYIPWFTSVWQGLKYYFAVNHHYVKRKLFTLVFPFRKRHWRREAKDDGDVGVGGGGQIGSSSGGVGGGRPHYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTKNSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPASLLDLLAVTGYKYVALNINMLLGLNLGSRIYLAVMIYTGLAMAYFSLKTFAQAVRLAGPRDLASAPVRVELMVLGFALLQFFSVWWLGYS 380
            A  A  ++    + +   QD+L      Y+P    +W  LKYYF VN+ YVK +L  L+ PFR ++WRR         +G G Q  S           Y  P  D NAPDLYIPLM F+TY+L+ GY+KGT N F+P+V+ +  S CLVMQL+EI V+   LY+L +  S LDL++ +GYKY+ L IN ++   LGS  Y   ++YTG+A++YF+L     +V    P +          ++ G + LQ   V W+ Y+
Sbjct:  189 AFAAGGSNPMAGLAMNSAQDFLQKQSEMYLPGAYGIWGSLKYYFTVNNSYVKSRLKILLLPFRHKNWRR---------IGNGEQDESKP-------MQYAPPTRDSNAPDLYIPLMGFLTYILLVGYSKGTSNQFSPDVITKDASYCLVMQLIEIGVLAACLYVLNSSISFLDLVSFSGYKYIPLVINAVVFQLLGSIAYYVFLLYTGVAVSYFTLNCMKGSVAEPSPENRLFR----NYLLFGVSCLQLILVCWISYT 427          
The following BLAST results are available for this feature:
BLAST of NO06G01090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26155.17.000e-11986.50Hrf1 [Nannochloropsis gaditana][more]
CBJ25787.13.700e-4343.35conserved unknown protein [Ectocarpus siliculosus][more]
POM78004.16.500e-4037.59membrane protein [Phytophthora palmivora var. palm... [more]
XP_009041673.11.500e-3945.26hypothetical protein AURANDRAFT_33780 [Aureococcus... [more]
XP_008910091.12.500e-3937.73hypothetical protein, variant 2 [Phytophthora para... [more]
ETI40050.13.200e-3937.73hypothetical protein F443_14443 [Phytophthora para... [more]
ETP37972.13.200e-3937.73hypothetical protein, variant 2 [Phytophthora para... [more]
KUF85000.13.200e-3937.73YIF1B protein [Phytophthora nicotianae][more]
ETL86870.14.200e-3937.36hypothetical protein, variant 2 [Phytophthora para... [more]
XP_008910089.19.400e-3938.22hypothetical protein PPTG_14505 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR098ncniR098Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000340NSK000340Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G01090.1NO06G01090.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|534296gene_10689Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100014g15gene4379Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G01090.1NO06G01090.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G01090 ID=NO06G01090|Name=NO06G01090|organism=Nannochloropsis oceanica|type=gene|length=1170bp
ATGCATCAGCACGTGCCCATTGAAGAGAACCAGCCTTGGCACCAGTCCCA
GTACCAGCAGCAGTCACGACAAACGCAGCAACACCAGGCGTACAACCCTG
CCCAGAATGGGGTGCCCCAGCAGCAGCAGCAGCAGCAGCAGCAACAACAA
CAACAACAACAATACCAGCCCCACCAACAACTGCAGCCAGGCGTGAATGT
CTTCAACCCTGGGGCCTACAAGCAGCAGCAGCAGCAGCAACAGCATCTAC
AGCAGCAACAACCACAACAGCAGCAACAGCAGGCGCCCTATGGAGGAGGG
CCGCCGTCGACGTTTGGGAGACATCCGGGCGGGCAGCAAAACATGGACTT
TGGCCTGGACGCTATCACTGCCGCGGCCAACAGCCAAGCGTTTAGCATGG
GAGTGGGAATGGGGCAAGATTACCTGAATGCGAGTGTGAATCGGTACATT
CCTTGGTTTACCTCTGTGTGGCAGGGCCTCAAATATTACTTTGCCGTAAA
TCACCACTATGTGAAACGTAAGCTTTTCACTTTGGTCTTCCCCTTCCGCA
AGCGGCACTGGAGAAGAGAGGCCAAGGACGATGGTGACGTGGGAGTAGGG
GGTGGAGGGCAGATAGGGAGTTCGAGTGGAGGAGTGGGGGGAGGAAGGCC
GCATTATCAGGTGCCGATGCTGGATGAGAATGCGCCCGACCTCTACATTC
CGCTGATGGCCTTCGTGACGTATGTGCTGGTGACGGGCTATGCGAAGGGG
ACAAAGAACTCGTTCACACCTGAGGTGTTGGTGGAGGTGACATCGTCGTG
CTTGGTGATGCAGCTGTTGGAGATAGCAGTTATCCGTCTGGGTCTTTACT
TACTCCAAGCCCCCGCCTCCCTCCTTGACCTTCTGGCCGTTACGGGTTAC
AAATACGTCGCTCTAAACATCAACATGCTCCTTGGCCTTAACCTCGGGTC
GCGCATTTATCTCGCTGTCATGATTTATACGGGGCTAGCCATGGCTTACT
TTTCTCTCAAGACCTTTGCGCAAGCTGTGCGCCTGGCAGGGCCGCGGGAC
CTAGCCTCGGCCCCTGTCCGGGTTGAGCTGATGGTGTTGGGGTTTGCTTT
GCTTCAATTTTTTTCCGTGTGGTGGTTAGGATATTCTGGGGATTTAAAGA
CGATGCCGACTAATGTATAA
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protein sequence of NO06G01090.1

>NO06G01090.1-protein ID=NO06G01090.1-protein|Name=NO06G01090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=390bp
MHQHVPIEENQPWHQSQYQQQSRQTQQHQAYNPAQNGVPQQQQQQQQQQQ
QQQQYQPHQQLQPGVNVFNPGAYKQQQQQQQHLQQQQPQQQQQQAPYGGG
PPSTFGRHPGGQQNMDFGLDAITAAANSQAFSMGVGMGQDYLNASVNRYI
PWFTSVWQGLKYYFAVNHHYVKRKLFTLVFPFRKRHWRREAKDDGDVGVG
GGGQIGSSSGGVGGGRPHYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKG
TKNSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPASLLDLLAVTGY
KYVALNINMLLGLNLGSRIYLAVMIYTGLAMAYFSLKTFAQAVRLAGPRD
LASAPVRVELMVLGFALLQFFSVWWLGYSGDLKTMPTNV*
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Synonyms
Publications