NO06G00980, NO06G00980 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G00980 vs. NCBI_GenBank
Match: EWM26104.1 (RNA helicase, DEAD-box type [Nannochloropsis gaditana]) HSP 1 Score: 953.4 bits (2463), Expect = 3.900e-274 Identity = 577/680 (84.85%), Postives = 607/680 (89.26%), Query Frame = 0 Query: 1 MGKQKKLQQQXXXXXXXRVAKVTKSLTQPKIKAANKAQRKELEARMTQ-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPAKRKAEPSVSKAQTNKKTRDESGNAATALPETPRMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFFANQPFDELPISDATKLALKALKFVNMTHIQSLAIPPLLTGKDVVGAAKTGSGKTLAFLVPVIELLSKVKWANRNGTGAVIISPTRELSLQIYGVLRDLCEEGKHSLTHGLVMGGANRRAEAERLVKGVGILVATPGRLLDHLQNTKGFVFRNLQVLVIDEADRILEQGFEEDMHQIIKILPKTRQTMLFSATQTKKVEDLTRLSIQGRPVFVGAHEESLVATVGGLEQGYVVCPSDKRFLLLFTFLKRNKHKKIMVFFSSCNSVKFHAELLNYIDLPVMDIHGRQKQQRRTTTFFQFCRQETGILLCTDVAARGLDIPAVDWIIQYDPPDDPREYIHRVGRTARGSEGKGRALLFLTAEEVGFLKYLRAAKVALNEYEFPEKKVANVQAQLTKLVEKNYYLNKSARDAYRSYLLAYASHSHKDIFNVHELDLQAVARAFGFSVPPRVDINLSSKGPKGRMKSTNKDKKFGSTGHAFSANNPYGKRGAGDARQFTR 680 MGK KKL QQ +VAKVTK+LTQPK+KA+NKAQRKELEARM + XXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXX V KRK PS S+A+ +K DE + TALPETPR XXXXXXXXXXXXXXXXX VFFANQPF++LPISDATK ALK L+FVNMTHIQSLAIPPLL GKDVV AAKTGSGKTLAFLVPV+ELLSKVKWA RNGTGA+IISPTRELS+QIYGVLRDLC+EG H LTHGL+MGGANRRAEAERLVKGV ILVATPGRLLDHLQNTKGF+ RNLQ+LVIDEADRILEQGFEEDMHQIIK LPK RQTMLFSATQTKKVEDLTRLS+QGRPVFVGAHEE+ VATVGGLEQGYVVCPSDKRFLLLFTFLKRNK +KIMVFFSSCNSVKFHAELLNYIDLPVMDIHGRQKQQRRTTTFFQFCRQ+ GILLCTDVAARGLDIPAVDWIIQYDPPDDPREYIHRVGRTARG+ GKGRALLFLTAEEVGFLKYLRAAKVALNEYEFPEKKVANVQAQLTKLVEKNYYLNKSARDAYRSYLLAYASHSHKDIFNVHELDLQAVARAFGFSVPPRVDINLSSKGPKGR+K+T+KDK+FGSTGH FSANNPYG+R AGD+RQFTR Sbjct: 72 MGKHKKLLQQ-QRQHQKKVAKVTKTLTQPKVKASNKAQRKELEARMARWTKEQXXXXXXXXXXXXXXXXXXXXXXXXXNGVIERNPSAXXXXXXXXXXXXXXXXXXXXXXXQRSRVNTKRKHLPSSSEAKKARKGVDE--KSGTALPETPR-----------XXXXXXXXXXXXXXXXXSGAVFFANQPFEDLPISDATKCALKRLRFVNMTHIQSLAIPPLLAGKDVVAAAKTGSGKTLAFLVPVVELLSKVKWAARNGTGAIIISPTRELSMQIYGVLRDLCDEGGHPLTHGLIMGGANRRAEAERLVKGVSILVATPGRLLDHLQNTKGFLTRNLQLLVIDEADRILEQGFEEDMHQIIKSLPKHRQTMLFSATQTKKVEDLTRLSMQGRPVFVGAHEEAAVATVGGLEQGYVVCPSDKRFLLLFTFLKRNKQRKIMVFFSSCNSVKFHAELLNYIDLPVMDIHGRQKQQRRTTTFFQFCRQDKGILLCTDVAARGLDIPAVDWIIQYDPPDDPREYIHRVGRTARGAAGKGRALLFLTAEEVGFLKYLRAAKVALNEYEFPEKKVANVQAQLTKLVEKNYYLNKSARDAYRSYLLAYASHSHKDIFNVHELDLQAVARAFGFSVPPRVDINLSSKGPKGRLKNTHKDKRFGSTGHKFSANNPYGRREAGDSRQFTR 737
BLAST of NO06G00980 vs. NCBI_GenBank
Match: CBJ29114.1 (DEAD box helicase [Ectocarpus siliculosus]) HSP 1 Score: 758.8 bits (1958), Expect = 1.400e-215 Identity = 376/501 (75.05%), Postives = 428/501 (85.43%), Query Frame = 0 Query: 183 FFANQPFDELPISDATKLALKALKFVNMTHIQSLAIPPLLTGKDVVGAAKTGSGKTLAFLVPVIELLSKVKWANRNGTGAVIISPTRELSLQIYGVLRDLCEEGKHSLTHGLVMGGANRRAEAERLVKGVGILVATPGRLLDHLQNTKGFVFRNLQVLVIDEADRILEQGFEEDMHQIIKILPKTRQTMLFSATQTKKVEDLTRLSIQGRPVFVGAHEESLVATVGGLEQGYVVCPSDKRFLLLFTFLKRNKHKKIMVFFSSCNSVKFHAELLNYIDLPVMDIHGRQKQQRRTTTFFQFCRQETGILLCTDVAARGLDIPAVDWIIQYDPPDDPREYIHRVGRTARGSEGKGRALLFLTAEEVGFLKYLRAAKVALNEYEFPEKKVANVQAQLTKLVEKNYYLNKSARDAYRSYLLAYASHSHKDIFNVHELDLQAVARAFGFSVPPRVDINLSSKGPKGRMKSTNKDK-----KFGSTGHAFSANNPYGKRGAGDARQFT 679 FF++ F LP+S AL L FV T IQ+ AIPPLL G+D+VGAAKTGSGKTLAFLVPV+E L KVKW++RNGT +IISPTRELSLQ YGVLRD+ E G THGL++GGANRRAEAERLVKGV +LV TPGRLLDHLQNTKGF+FRN+Q+LVIDEADRILEQGFEE+MHQIIK+LPK RQTMLFSATQTKKVEDL RLSI+ +PV+VG + +TV GLEQGYVVCPSDKRFLLLFTFLK+N+ KKIMVFFSSCNSVKFH+ELLNYID+PVMDIHGRQKQQ+RTT+FFQFC+Q+TG+LLCTDVAARGLDIPAVDWIIQ+DPPD EYIHRVGRTARG GKGRALLFL EEVGFL+YLR AK LNEYEFP KKVANVQ+QL++L+EKNYYLNKSAR+AYRSYLLAY+SHS KDI++VHELDLQAVARAFGF+VPPRVD+ LS++G KGR +D+ G GH+FSA NPYG++ GD RQFT Sbjct: 143 FFSDVEFSTLPLSSGMLSALAKLNFVMTTKIQAQAIPPLLAGEDMVGAAKTGSGKTLAFLVPVLECLHKVKWSHRNGTACIIISPTRELSLQTYGVLRDVIENGNLKQTHGLLIGGANRRAEAERLVKGVNVLVVTPGRLLDHLQNTKGFLFRNMQMLVIDEADRILEQGFEEEMHQIIKLLPKERQTMLFSATQTKKVEDLARLSIRNKPVYVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKNRKKKIMVFFSSCNSVKFHSELLNYIDMPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPAVDWIIQFDPPDQTAEYIHRVGRTARGQSGKGRALLFLLPEEVGFLRYLRTAKAKLNEYEFPVKKVANVQSQLSRLIEKNYYLNKSAREAYRSYLLAYSSHSLKDIYDVHELDLQAVARAFGFTVPPRVDLKLSARGQKGRGGGKERDQGRRKMAVGGGGHSFSATNPYGQKAPGDRRQFT 643
BLAST of NO06G00980 vs. NCBI_GenBank
Match: XP_002180703.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48111.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 726.5 bits (1874), Expect = 7.800e-206 Identity = 355/491 (72.30%), Postives = 413/491 (84.11%), Query Frame = 0 Query: 189 FDELPISDATKLALKALKFVNMTHIQSLAIPPLLTGKDVVGAAKTGSGKTLAFLVPVIELLSKVKWANRNGTGAVIISPTRELSLQIYGVLRDLCEEGKHSLTHGLVMGGANRRAEAERLVKGVGILVATPGRLLDHLQNTKGFVFRNLQVLVIDEADRILEQGFEEDMHQIIKILPKTRQTMLFSATQTKKVEDLTRLSIQGR-PVFVGAHEESLVATVGGLEQGYVVCPSDKRFLLLFTFLKRNKHKKIMVFFSSCNSVKFHAELLNYIDLPVMDIHGRQKQQRRTTTFFQFCRQETGILLCTDVAARGLDIPAVDWIIQYDPPDDPREYIHRVGRTARGSEGKGRALLFLTAEEVGFLKYLRAAKVALNEYEFPEKKVANVQAQLTKLVEKNYYLNKSARDAYRSYLLAYASHSHKDIFNVHELDLQAVARAFGFSVPPRVDINLSSKGPKGRMKSTNKDKKFGSTGHAFSANNPYGKRGAGDARQFT 679 F+ LP+S+ TK L L F MT IQS AIPPLLTGKD++GAAKTGSGKTLAFL+P IELL K K+ ++NGTG ++ISPTREL++QIYGVL++LC GKHS T+GL+MGGANRR E+ERL KGV ++V TPGRLLDHLQNTK FVFRNL LV+DEADRILEQGFE+D+ I+K+LPK RQTMLFSATQTKKVEDL RLSI + VFV ++ +AT GLEQGYV CPSDKRFLLLFTFLK+NK KKIMVFFSSCNSVK+HAELLNYID+PVMDIHGRQKQ +RTTTFFQFC+ + G +LCTDVAARGLDIP VDWIIQ+DPPDDP+EYIHRVGRTARG++G GRALLFLT EE GFL+YL+AAKV LNEY+FP KVANVQ+QL +L+E NYYLN+++RDAYRSYLLAYASHSH+DIFNVHELDLQAV AFGF+ PPRVD+ + K + K K + +GHAFSA+NPYGKR A D RQF+ Sbjct: 100 FENLPLSEKTKYGLNDLGFTRMTQIQSKAIPPLLTGKDLIGAAKTGSGKTLAFLIPCIELLHKAKFTSKNGTGVIVISPTRELAMQIYGVLQELCTHGKHSQTYGLIMGGANRRTESERLAKGVNVIVCTPGRLLDHLQNTKAFVFRNLLALVMDEADRILEQGFEDDLRSILKLLPKERQTMLFSATQTKKVEDLARLSINPKNSVFVDIPSDTNLATAAGLEQGYVTCPSDKRFLLLFTFLKKNKKKKIMVFFSSCNSVKYHAELLNYIDVPVMDIHGRQKQVKRTTTFFQFCKSDIGTMLCTDVAARGLDIPRVDWIIQFDPPDDPKEYIHRVGRTARGAKGSGRALLFLTPEETGFLRYLKAAKVTLNEYDFPTTKVANVQSQLYRLIESNYYLNRASRDAYRSYLLAYASHSHRDIFNVHELDLQAVGVAFGFTTPPRVDLAFGKE--KRKKKVDGKTARLAGSGHAFSADNPYGKRDASDRRQFS 588
BLAST of NO06G00980 vs. NCBI_GenBank
Match: EJK73804.1 (hypothetical protein THAOC_04552 [Thalassiosira oceanica]) HSP 1 Score: 717.6 bits (1851), Expect = 3.600e-203 Identity = 363/524 (69.27%), Postives = 414/524 (79.01%), Query Frame = 0 Query: 189 FDELPISDATKLALKALKFVNMTHIQSLAIPPLLTGKDVVGAAKTGSGKTLAFLVPVIELLSKVKWANRNGTGAVIISPTRELSLQIYGVLRDLCEEGKHSLTHGLVMGGANRRAEAERLVKGVGILVATPGRLLDHLQNTKGFVFRNLQVLVIDEAD-----------------------------RILEQGFEEDMHQIIKILPKTRQTMLFSATQTKKVEDLTRLSIQGRPVFVGAHEESLVATVGGLEQGYVVCPSDKRFLLLFTFLKRNKHKKIMVFFSSCNSVKFHAELLNYIDLPVMDIHGRQKQQRRTTTFFQFCRQETGILLCTDVAARGLDIPAVDWIIQYDPPDDPREYIHRVGRTARGSEGKGRALLFLTAEEVGFLKYLRAAKVALNEYEFPEKKVANVQAQLTKLVEKNYYLNKSARDAYRSYLLAYASHSHKDIFNVHELDLQAVARAFGFSVPPRVDINLSSKGPKGRMKSTNKDKKFGST-----GHAFSANNPYGKRGAGDARQFT 679 F LP+SD T+ AL + F MT IQSL+IP LL+GKD++GAAKTGSGKTLAFL+PV+ELL K+ +RNGTGA++ISPTREL++QIYGV +DLC GKH T+GL+MGGANRR EAERL KGV I++ATPGRLLDHLQNTKGFVFRNL V+DEAD RILEQGFE+D+ IIKILPK RQTMLFSATQTKK+EDL R +I V+V ++ +AT GLEQGYV PSD+RFLLLFTFLK+NK+KKIMVFFSSCNSVKFHAELLNYID+P MDIHGRQKQQ+RTTTFFQFC+Q G LLCTDVAARGLDIPAVDWIIQ+DPPDDP+EYIHRVGRTARG EG GRALLFLT EE GFL+YL+AAKV LNEYEFP KK+ANVQ+QL +L+EKNYYLN +ARDAYRSYLLAYASHS +DIFNVHELDL AV RAFGF+ PPRVD+ S KGPK R + K G T GHAFSA+NPYGK+ A D RQF+ Sbjct: 102 FTSLPLSDNTQSALATMGFTQMTKIQSLSIPALLSGKDLIGAAKTGSGKTLAFLLPVVELLHNAKFGSRNGTGAIVISPTRELAMQIYGVCKDLCTNGKHHQTYGLIMGGANRRTEAERLAKGVNIIIATPGRLLDHLQNTKGFVFRNLLAFVMDEADVRIVLFGVKYSWCYDDSHRLTTATIVPPKRILEQGFEDDLRAIIKILPKQRQTMLFSATQTKKIEDLARTAIDKSAVYVEVPSDTSLATAEGLEQGYVTVPSDQRFLLLFTFLKKNKNKKIMVFFSSCNSVKFHAELLNYIDIPCMDIHGRQKQQKRTTTFFQFCKQSKGTLLCTDVAARGLDIPAVDWIIQFDPPDDPKEYIHRVGRTARGDEGTGRALLFLTPEETGFLRYLKAAKVTLNEYEFPMKKLANVQSQLQRLIEKNYYLNCAARDAYRSYLLAYASHSLRDIFNVHELDLSAVGRAFGFTAPPRVDLAFSMKGPKARRHNGQVTKGKGKTGKLANGHAFSASNPYGKKSAKDKRQFS 625
BLAST of NO06G00980 vs. NCBI_GenBank
Match: XP_002288885.1 (atp-dependent RNA helicase [Thalassiosira pseudonana CCMP1335] >EED94321.1 atp-dependent RNA helicase [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 714.1 bits (1842), Expect = 4.000e-202 Identity = 353/496 (71.17%), Postives = 414/496 (83.47%), Query Frame = 0 Query: 189 FDELPISDATKLALKALKFVNMTHIQSLAIPPLLTGKDVVGAAKTGSGKTLAFLVPVIELLSKVKWANRNGTGAVIISPTRELSLQIYGVLRDLCEEGKHSLTHGLVMGGANRRAEAERLVKGVGILVATPGRLLDHLQNTKGFVFRNLQVLVIDEADRILEQGFEEDMHQIIKILPKTRQTMLFSATQTKKVEDLTRLSIQGR-PVFVGAHEESLVATVGGLEQGYVVCPSDKRFLLLFTFLKRNKHKKIMVFFSSCNSVKFHAELLNYIDLPVMDIHGRQKQQRRTTTFFQFCRQETGILLCTDVAARGLDIPAVDWIIQYDPPDDPREYIHRVGRTARGSEGKGRALLFLTAEEVGFLKYLRAAKVALNEYEFPEKKVANVQAQLTKLVEKNYYLNKSARDAYRSYLLAYASHSHKDIFNVHELDLQAVARAFGFSVPPRVDINLSSKGPK-----GRMKSTNKDKKFGSTGHAFSANNPYGKRGAGDARQFT 679 F LP+SD T+ AL A+ F MT IQ+++IP LL+GKD++GAAKTGSGKTLAFL+PV+ELL K+ +RNGTGA++ISPTREL++QIYGV +DLC GKH T+GL++GGANRR EAERL KGV I++ATPGRLLDHLQNTKGFVFRNL V+DEADRILEQGFE+D+ IIK LPK RQTMLFSATQTKKVEDL R +I + V+V E+ +AT GLEQGYV PSD+RFLLLFTFLK+NK+KKIMVFFSSCNSVKFH+ELLNYID+PVMDIHGRQKQQ+RTTTFFQFC+Q TG LLCTDVAARGLDIPAVDWIIQ+DPPDDP+EYIHRVGRTARG +GKGRALLFLT EE GFL+YL+AAKV LNEYEFP K+ANVQ+QL +L+EKNYYLN +ARDAYRSYLLAY SHS +DIF+VH LDL AV RAFGF+ PPRVD+ S KGPK G++ + H+FSA+NPYG++ +GD RQF+ Sbjct: 22 FASLPLSDLTQNALSAMGFTRMTQIQAMSIPALLSGKDLIGAAKTGSGKTLAFLLPVVELLHNAKFGSRNGTGAIVISPTRELAMQIYGVCKDLCTSGKHHQTYGLIIGGANRRTEAERLAKGVNIVIATPGRLLDHLQNTKGFVFRNLLAFVMDEADRILEQGFEDDLRSIIKALPKQRQTMLFSATQTKKVEDLARTAIDPKSAVYVEVPNETNLATAAGLEQGYVTVPSDQRFLLLFTFLKKNKNKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTTFFQFCKQTTGTLLCTDVAARGLDIPAVDWIIQFDPPDDPKEYIHRVGRTARGEKGKGRALLFLTPEETGFLRYLKAAKVTLNEYEFPMTKLANVQSQLQRLIEKNYYLNCAARDAYRSYLLAYTSHSLRDIFDVHSLDLAAVGRAFGFTAPPRVDLAFSVKGPKARRHNGQVMNGXXXXXXXXXXHSFSASNPYGRKESGDKRQFS 517
BLAST of NO06G00980 vs. NCBI_GenBank
Match: ETO61905.1 (hypothetical protein F444_20137 [Phytophthora parasitica P1976]) HSP 1 Score: 708.8 bits (1828), Expect = 1.700e-200 Identity = 350/502 (69.72%), Postives = 419/502 (83.47%), Query Frame = 0 Query: 183 FFANQPFDELPISDATKLALKALKFVNMTHIQSLAIPPLLTGKDVVGAAKTGSGKTLAFLVPVIELLSKVKWANRNGTGAVIISPTRELSLQIYGVLRDLCEEGKHSLTHGLVMGGANRRAEAERLVKGVGILVATPGRLLDHLQNTKGFVFRNLQVLVIDEADRILEQGFEEDMHQIIKILPKTRQTMLFSATQTKKVEDLTRLSIQGRPVFVGAHEESLVATVGGLEQGYVVCPSDKRFLLLFTFLKRNKHKKIMVFFSSCNSVKFHAELLNYIDLPVMDIHGRQKQQRRTTTFFQFCRQETGILLCTDVAARGLDIPAVDWIIQYDPPDDPREYIHRVGRTARGSEGKGRALLFLTAEEVGFLKYLRAAKVALNEYEFPEKKVANVQAQLTKLVEKNYYLNKSARDAYRSYLLAYASHSHKDIFNVHELDLQAVARAFGFSVPPRVDINLSSKGPKGRMKSTNKDK-------KFGSTGHAFSANNPYGKRGAGDARQF 678 +F+++ F LP+S++T+ AL + F MT IQS +I PLL G+D++GAAKTGSGKTL+FL+P +ELL KV++ R GTG ++ISPTREL+LQIYGV+RD+C+ HS THG+VMGGANRRAEAERLVKGV IL++TPGRLLDHLQNTK F++ NLQ+LVIDEADRIL GFEE+M QIIK +PK RQTMLFSATQTKKVEDL RLSI+ +PV+VG EE ATV LEQGYVV PSDKRFLLLFTFLK+N KK+MVFFSSC++VKF+ ELLNYID+PV+DIHG+QKQ +RTTTFFQFC +TGILLCTDVAARGLDIPAVDWIIQ+DPPDDPREYIHRVGRTARG++GKG+ALL L +E+GFLKYL+A+KVALNEYEFP K+ANV++QL KLVEK YYL+KSA+DAYR YLLAYASHS K IF+V LDLQ VA++FG VPP+V + + + G G+ K T+ D KF +GHAFSA+NPYGKR AGD RQF Sbjct: 102 YFSSEEFASLPLSESTRKALADMGFTKMTKIQSKSIRPLLAGQDLLGAAKTGSGKTLSFLIPAVELLHKVRFTARKGTGCIVISPTRELALQIYGVVRDICK--YHSQTHGIVMGGANRRAEAERLVKGVNILISTPGRLLDHLQNTKAFIYHNLQILVIDEADRILSIGFEEEMRQIIKCIPKERQTMLFSATQTKKVEDLARLSIKEKPVYVGVEEEDTKATVATLEQGYVVTPSDKRFLLLFTFLKKNLKKKVMVFFSSCSAVKFYGELLNYIDIPVLDIHGKQKQNKRTTTFFQFCNAKTGILLCTDVAARGLDIPAVDWIIQFDPPDDPREYIHRVGRTARGAKGKGKALLMLLPDELGFLKYLKASKVALNEYEFPVSKIANVESQLMKLVEKTYYLHKSAKDAYRGYLLAYASHSLKGIFDVGRLDLQGVAKSFGLQVPPKVTLPVKTNGKTGKRKGTSFDNDGSSRGGKFQRSGHAFSADNPYGKRAAGDKRQF 601
BLAST of NO06G00980 vs. NCBI_GenBank
Match: XP_008914209.1 (hypothetical protein PPTG_17988 [Phytophthora parasitica INRA-310] >ETI33169.1 hypothetical protein F443_20123 [Phytophthora parasitica P1569] >ETL80160.1 hypothetical protein L917_19317 [Phytophthora parasitica] >ETM33408.1 hypothetical protein L914_19352 [Phytophthora parasitica] >ETN00538.1 hypothetical protein PPTG_17988 [Phytophthora parasitica INRA-310] >KUF99742.1 ATP-dependent RNA helicase HAS1 [Phytophthora nicotianae]) HSP 1 Score: 708.0 bits (1826), Expect = 2.900e-200 Identity = 350/502 (69.72%), Postives = 418/502 (83.27%), Query Frame = 0 Query: 183 FFANQPFDELPISDATKLALKALKFVNMTHIQSLAIPPLLTGKDVVGAAKTGSGKTLAFLVPVIELLSKVKWANRNGTGAVIISPTRELSLQIYGVLRDLCEEGKHSLTHGLVMGGANRRAEAERLVKGVGILVATPGRLLDHLQNTKGFVFRNLQVLVIDEADRILEQGFEEDMHQIIKILPKTRQTMLFSATQTKKVEDLTRLSIQGRPVFVGAHEESLVATVGGLEQGYVVCPSDKRFLLLFTFLKRNKHKKIMVFFSSCNSVKFHAELLNYIDLPVMDIHGRQKQQRRTTTFFQFCRQETGILLCTDVAARGLDIPAVDWIIQYDPPDDPREYIHRVGRTARGSEGKGRALLFLTAEEVGFLKYLRAAKVALNEYEFPEKKVANVQAQLTKLVEKNYYLNKSARDAYRSYLLAYASHSHKDIFNVHELDLQAVARAFGFSVPPRVDINLSSKGPKGRMKSTNKDK-------KFGSTGHAFSANNPYGKRGAGDARQF 678 +F+++ F LP+S+ T+ AL + F MT IQS +I PLL G+D++GAAKTGSGKTL+FL+P +ELL KV++ R GTG ++ISPTREL+LQIYGV+RD+C+ HS THG+VMGGANRRAEAERLVKGV IL++TPGRLLDHLQNTK F++ NLQ+LVIDEADRIL GFEE+M QIIK +PK RQTMLFSATQTKKVEDL RLSI+ +PV+VG EE ATV LEQGYVV PSDKRFLLLFTFLK+N KK+MVFFSSC++VKF+ ELLNYID+PV+DIHG+QKQ +RTTTFFQFC +TGILLCTDVAARGLDIPAVDWIIQ+DPPDDPREYIHRVGRTARG++GKG+ALL L +E+GFLKYL+A+KVALNEYEFP K+ANV++QL KLVEK YYL+KSA+DAYR YLLAYASHS K IF+V LDLQ VA++FG VPP+V + + + G G+ K T+ D KF +GHAFSA+NPYGKR AGD RQF Sbjct: 102 YFSSEEFASLPLSEPTRKALADMGFTKMTKIQSKSIRPLLAGQDLLGAAKTGSGKTLSFLIPAVELLHKVRFTARKGTGCIVISPTRELALQIYGVVRDICK--YHSQTHGIVMGGANRRAEAERLVKGVNILISTPGRLLDHLQNTKAFIYHNLQILVIDEADRILSIGFEEEMRQIIKCIPKERQTMLFSATQTKKVEDLARLSIKEKPVYVGVEEEDTKATVATLEQGYVVTPSDKRFLLLFTFLKKNLKKKVMVFFSSCSAVKFYGELLNYIDIPVLDIHGKQKQNKRTTTFFQFCNAKTGILLCTDVAARGLDIPAVDWIIQFDPPDDPREYIHRVGRTARGAKGKGKALLMLLPDELGFLKYLKASKVALNEYEFPVSKIANVESQLMKLVEKTYYLHKSAKDAYRGYLLAYASHSLKGIFDVGRLDLQGVAKSFGLQVPPKVTLPVKTNGKTGKRKGTSFDNDGSSRGGKFQRSGHAFSADNPYGKRAAGDKRQF 601
BLAST of NO06G00980 vs. NCBI_GenBank
Match: ETK73483.1 (hypothetical protein L915_19586 [Phytophthora parasitica] >ETL26913.1 hypothetical protein L916_19477 [Phytophthora parasitica] >ETP03000.1 hypothetical protein F441_20003 [Phytophthora parasitica CJ01A1] >ETP31151.1 hypothetical protein F442_19952 [Phytophthora parasitica P10297]) HSP 1 Score: 708.0 bits (1826), Expect = 2.900e-200 Identity = 350/502 (69.72%), Postives = 418/502 (83.27%), Query Frame = 0 Query: 183 FFANQPFDELPISDATKLALKALKFVNMTHIQSLAIPPLLTGKDVVGAAKTGSGKTLAFLVPVIELLSKVKWANRNGTGAVIISPTRELSLQIYGVLRDLCEEGKHSLTHGLVMGGANRRAEAERLVKGVGILVATPGRLLDHLQNTKGFVFRNLQVLVIDEADRILEQGFEEDMHQIIKILPKTRQTMLFSATQTKKVEDLTRLSIQGRPVFVGAHEESLVATVGGLEQGYVVCPSDKRFLLLFTFLKRNKHKKIMVFFSSCNSVKFHAELLNYIDLPVMDIHGRQKQQRRTTTFFQFCRQETGILLCTDVAARGLDIPAVDWIIQYDPPDDPREYIHRVGRTARGSEGKGRALLFLTAEEVGFLKYLRAAKVALNEYEFPEKKVANVQAQLTKLVEKNYYLNKSARDAYRSYLLAYASHSHKDIFNVHELDLQAVARAFGFSVPPRVDINLSSKGPKGRMKSTNKDK-------KFGSTGHAFSANNPYGKRGAGDARQF 678 +F+++ F LP+S+ T+ AL + F MT IQS +I PLL G+D++GAAKTGSGKTL+FL+P +ELL KV++ R GTG ++ISPTREL+LQIYGV+RD+C+ HS THG+VMGGANRRAEAERLVKGV IL++TPGRLLDHLQNTK F++ NLQ+LVIDEADRIL GFEE+M QIIK +PK RQTMLFSATQTKKVEDL RLSI+ +PV+VG EE ATV LEQGYVV PSDKRFLLLFTFLK+N KK+MVFFSSC++VKF+ ELLNYID+PV+DIHG+QKQ +RTTTFFQFC +TGILLCTDVAARGLDIPAVDWIIQ+DPPDDPREYIHRVGRTARG++GKG+ALL L +E+GFLKYL+A+KVALNEYEFP K+ANV++QL KLVEK YYL+KSA+DAYR YLLAYASHS K IF+V LDLQ VA++FG VPP+V + + + G G+ K T+ D KF +GHAFSA+NPYGKR AGD RQF Sbjct: 102 YFSSEEFASLPLSEPTRKALADMGFTKMTKIQSKSIRPLLAGQDLLGAAKTGSGKTLSFLIPAVELLHKVRFTARKGTGCIVISPTRELALQIYGVVRDICK--YHSQTHGIVMGGANRRAEAERLVKGVNILISTPGRLLDHLQNTKAFIYHNLQILVIDEADRILSIGFEEEMRQIIKCIPKERQTMLFSATQTKKVEDLARLSIKEKPVYVGVEEEDTKATVATLEQGYVVTPSDKRFLLLFTFLKKNLKKKVMVFFSSCSAVKFYGELLNYIDIPVLDIHGKQKQNKRTTTFFQFCNAKTGILLCTDVAARGLDIPAVDWIIQFDPPDDPREYIHRVGRTARGAKGKGKALLMLLPDELGFLKYLKASKVALNEYEFPVSKIANVESQLMKLVEKTYYLHKSAKDAYRGYLLAYASHSLKGIFDVGRLDLQGVAKSFGLQVPPKVTLPVKTNGKTGKRKGTSFDNDGSSRGGKFQRSGHAFSADNPYGKRAAGDKRQF 601
BLAST of NO06G00980 vs. NCBI_GenBank
Match: OWZ22418.1 (ATP-dependent RNA helicase [Phytophthora megakarya]) HSP 1 Score: 706.8 bits (1823), Expect = 6.400e-200 Identity = 348/502 (69.32%), Postives = 419/502 (83.47%), Query Frame = 0 Query: 183 FFANQPFDELPISDATKLALKALKFVNMTHIQSLAIPPLLTGKDVVGAAKTGSGKTLAFLVPVIELLSKVKWANRNGTGAVIISPTRELSLQIYGVLRDLCEEGKHSLTHGLVMGGANRRAEAERLVKGVGILVATPGRLLDHLQNTKGFVFRNLQVLVIDEADRILEQGFEEDMHQIIKILPKTRQTMLFSATQTKKVEDLTRLSIQGRPVFVGAHEESLVATVGGLEQGYVVCPSDKRFLLLFTFLKRNKHKKIMVFFSSCNSVKFHAELLNYIDLPVMDIHGRQKQQRRTTTFFQFCRQETGILLCTDVAARGLDIPAVDWIIQYDPPDDPREYIHRVGRTARGSEGKGRALLFLTAEEVGFLKYLRAAKVALNEYEFPEKKVANVQAQLTKLVEKNYYLNKSARDAYRSYLLAYASHSHKDIFNVHELDLQAVARAFGFSVPPRVDINLSSKGPKGRMKSTNKDK-------KFGSTGHAFSANNPYGKRGAGDARQF 678 +F+++ F LP+S+ T+ AL + F MT IQS +I PLL G+D++GAAKTGSGKTL+FL+P +ELL KV++ R GTG ++ISPTREL+LQIYGV+RD+C+ HS THG+VMGGANRRAEAERLVKGV IL++TPGRLLDHLQNTK F++ NLQ+LVIDEADRIL GFEE+M QIIK +PK RQTMLFSATQTKKVEDL RLSI+ +PV+VG EE ATV LEQGYVV PSDKRFLLLFTFLK+N KK+MVFFSSC++VKF+ ELLNYID+PV+DIHG+QKQ +RTTTFFQFC +TGILLCTDVAARGLDIPAVDWIIQ+DPPDDPREYIHRVGRTARG++GKG+ALL L +E+GFLKYL+A+KVALNEYEFP K+ANV++QL KLVEK YYL+KSA+DAYR YLLAYASHS K++F+V LDLQ VA++FG VPP+V + + + G G+ K T+ D KF +GHAFSA+NPYGKR +GD RQF Sbjct: 86 YFSSEEFASLPLSEPTRKALADMGFTKMTKIQSKSIRPLLAGQDLLGAAKTGSGKTLSFLIPAVELLHKVRFTARKGTGCIVISPTRELALQIYGVVRDICK--YHSQTHGIVMGGANRRAEAERLVKGVNILISTPGRLLDHLQNTKAFIYHNLQILVIDEADRILSIGFEEEMRQIIKCIPKERQTMLFSATQTKKVEDLARLSIKEKPVYVGVEEEDTKATVATLEQGYVVTPSDKRFLLLFTFLKKNLKKKVMVFFSSCSAVKFYGELLNYIDIPVLDIHGKQKQNKRTTTFFQFCNAKTGILLCTDVAARGLDIPAVDWIIQFDPPDDPREYIHRVGRTARGAKGKGKALLMLLPDELGFLKYLKASKVALNEYEFPVSKIANVESQLMKLVEKTYYLHKSAKDAYRGYLLAYASHSLKNLFDVARLDLQGVAKSFGLQVPPKVTLPVKTNGKAGKRKGTSFDNDGSSRGGKFQRSGHAFSADNPYGKRASGDKRQF 585
BLAST of NO06G00980 vs. NCBI_GenBank
Match: GAX93676.1 (DEAD box helicase putative [Pythium insidiosum]) HSP 1 Score: 698.0 bits (1800), Expect = 3.000e-197 Identity = 347/499 (69.54%), Postives = 416/499 (83.37%), Query Frame = 0 Query: 183 FFANQPFDELPISDATKLALKALKFVNMTHIQSLAIPPLLTGKDVVGAAKTGSGKTLAFLVPVIELLSKVKWANRNGTGAVIISPTRELSLQIYGVLRDLCEEGKHSLTHGLVMGGANRRAEAERLVKGVGILVATPGRLLDHLQNTKGFVFRNLQVLVIDEADRILEQGFEEDMHQIIKILPKTRQTMLFSATQTKKVEDLTRLSIQGRPVFVGAHEESLVATVGGLEQGYVVCPSDKRFLLLFTFLKRNKHKKIMVFFSSCNSVKFHAELLNYIDLPVMDIHGRQKQQRRTTTFFQFCRQETGILLCTDVAARGLDIPAVDWIIQYDPPDDPREYIHRVGRTARGSEGKGRALLFLTAEEVGFLKYLRAAKVALNEYEFPEKKVANVQAQLTKLVEKNYYLNKSARDAYRSYLLAYASHSHKDIFNVHELDLQAVARAFGFSVPPRVDINLSSKGPKGRMKSTNKD----KKFGSTGHAFSANNPYGKRGAGDARQF 678 +F+ + F LP+SD TK AL L F MT IQ+ +I PLL G+D++GAAKTGSGKTL+FL+P +ELL KVK+ +R GTG ++ISPTREL+LQIYGV+R++C+ HS THG+VMGGANRRAEAE+L+KGV IL++TPGRLLDHLQNTKGFV+ NLQ+LVIDEADRIL GFEE+M QIIK +PK RQTMLFSATQTKKVEDL RLSI+ +PV+VG EE ATV LEQGYVV PS+KRFLLLFTFLKRN KK+MVFFSSC++VKF+ ELLNYID+PV+DIHG+QKQ +RTTTFFQFC ++GILLCTDVAARGLDIPAVDWIIQ+DPPDDPREYIHRVGRTARG+ GKG+ALL L +E+ FLKYL+A+KVALNEYEFP K+ANV++QL KLVEK YYL+KSA+DAYR YLLAYASHS K+IF+V LDLQAVA++FG VPP+V + + + G + + + D +KF +GHAFSA NPYGKR A D RQF Sbjct: 89 YFSTEEFASLPLSDPTKKALAELGFKRMTKIQAQSIRPLLAGQDLLGAAKTGSGKTLSFLIPSVELLHKVKFTSRKGTGCIVISPTRELALQIYGVVREICK--YHSQTHGIVMGGANRRAEAEKLIKGVNILISTPGRLLDHLQNTKGFVYHNLQILVIDEADRILSIGFEEEMRQIIKCIPKERQTMLFSATQTKKVEDLARLSIKDKPVYVGVEEEDTKATVSTLEQGYVVTPSEKRFLLLFTFLKRNLKKKVMVFFSSCSAVKFYGELLNYIDIPVLDIHGKQKQNKRTTTFFQFCNAKSGILLCTDVAARGLDIPAVDWIIQFDPPDDPREYIHRVGRTARGATGKGKALLMLLPDELMFLKYLKASKVALNEYEFPTGKIANVESQLMKLVEKVYYLHKSAKDAYRGYLLAYASHSLKNIFDVSRLDLQAVAKSFGLQVPPKVTLPVKTTGKTAKRQRGDDDSGGKRKFQRSGHAFSAXNPYGKRDASDKRQF 585 The following BLAST results are available for this feature:
BLAST of NO06G00980 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G00980 ID=NO06G00980|Name=NO06G00980|organism=Nannochloropsis oceanica|type=gene|length=2351bpback to top protein sequence of NO06G00980.1 >NO06G00980.1-protein ID=NO06G00980.1-protein|Name=NO06G00980.1|organism=Nannochloropsis oceanica|type=polypeptide|length=680bpback to top Synonyms
Publications
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