NO06G00900, NO06G00900 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G00900 vs. NCBI_GenBank
Match: XP_007764365.1 (hypothetical protein CONPUDRAFT_116757 [Coniophora puteana RWD-64-598 SS2] >EIW84622.1 hypothetical protein CONPUDRAFT_116757 [Coniophora puteana RWD-64-598 SS2]) HSP 1 Score: 69.7 bits (169), Expect = 4.100e-8 Identity = 59/190 (31.05%), Postives = 91/190 (47.89%), Query Frame = 0
Query: 527 FQVSSFNSGSTYTVEFEVVNSGRGGVERKCVG---TCSCPDNQKQGSRYACKHQLFVAVRVLGM--------TPGMLQAGQSLPVDEFAIALDSDRLA--HLRLEPLSAAAAETARPAADL---KGPGPQKLLTSELECAICFEVILEEDGSHDPLSYCVLCGQSVHTQCQEQWNRSSNCGIGGTCVYCR 701
F +S + EF V+ S G V +G +CSCPD K CKH LF+ ++VL + +L + A +S LA H++ A A +++P++ KG +K L E +CA+C+E + GS + L++C CG ++H+QC +W RSS + TCVYCR
Sbjct: 65 FMLSRRRNPGELREEFGVLGS-TGNVYTVTIGNFPSCSCPDASKGNH---CKHILFIYLKVLQVPQESHVWYQKALLTSELDEIFSRATPAPNSAALADHHIQEAYARATGASSSQPSSSSGKDKGKPKRKELGPEDDCAVCYEA-MGGKGS-ESLTWCDACGNALHSQCFAEWARSSRGSV--TCVYCR 246
BLAST of NO06G00900 vs. NCBI_GenBank
Match: GAQ90120.1 (mitogen-activated protein kinase kinase kinase 1 [Klebsormidium nitens]) HSP 1 Score: 68.9 bits (167), Expect = 7.000e-8 Identity = 52/161 (32.30%), Postives = 75/161 (46.58%), Query Frame = 0
Query: 559 TCSCPDNQKQGSRYACKHQLFVAVRVLGM---TPGMLQAGQSLPVDEFAIALDSDRLAHLRLEPLSAAAAETAR---------------PAADLKGPGPQKLLTSELECAICFEVILEEDGSHDPLSYCVLCGQSVHTQCQEQWNRSSNCGIGGTCVYCRS 702
+C+CPD K + CKH LFV +RVL + P + Q ++L E A LD D+ A A++ R A +L G + L E +C ICFE + E +P+ +C CG ++H C +W++S G TCVYCRS
Sbjct: 163 SCTCPDAAKGNT---CKHWLFVVLRVLKLPRDDPRVWQ--KALLSTELADLLDKDKAACDETAAAGVVASDLVRRRYHEVVGTSEGAKEHAEELLGSVQRPL---EGDCPICFEELSPEGRPGEPVVFCHTCGNNIHRDCFARWSQSKPKG-QVTCVYCRS 314
BLAST of NO06G00900 vs. NCBI_GenBank
Match: ORY03983.1 (zf-PARP-domain-containing protein [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 68.6 bits (166), Expect = 9.200e-8 Identity = 43/132 (32.58%), Postives = 67/132 (50.76%), Query Frame = 0
Query: 5 FALEHARSGRSQCHGRCEKENKLIPKGCWRFGSVTEINGIPMTFWRCLKCVTPQQIRNLLNMFEHWSVFFPPSLPADEMSLLESFFQLTINDEKGTEGKRLEIIRQLNRGLDEKVDMKREGGAQDRDVTAEE 137
+ +E+ARSGRS+C G +K+IPKG R GSVTE NG+ TFWR CVTP+ + ++ DE+ L+ F +L D++ E E +R R L K D ++ + ++ ++
Sbjct: 3 YVVEYARSGRSKCKGPKSCVDKVIPKGALRLGSVTERNGMEQTFWRHWNCVTPKILESI-----------------DEVENLDGFEELLFEDKEIVE----EAVR--TRSLPNKDDEDQDQESNPKETAKKD 111
BLAST of NO06G00900 vs. NCBI_GenBank
Match: KLO14892.1 (hypothetical protein SCHPADRAFT_825594 [Schizopora paradoxa]) HSP 1 Score: 68.2 bits (165), Expect = 1.200e-7 Identity = 55/193 (28.50%), Postives = 87/193 (45.08%), Query Frame = 0
Query: 527 FQVSSFNSGSTYTVEFEVVNSGRGGVERKCVG---TCSCPDNQKQGSRYACKHQLFVAVRVL---GMTPGMLQAG----------QSLPVDEFAIALDSDRLAHLRL--EPLSAAAAETARPAADLKGPGPQKLLTSELECAICFEVILEEDGSHDPLSYCVLCGQSVHTQCQEQWNRSSNCGIGGTCVYCRS 702
+ + SGS EF+V+ S G V + C+CPD K CKH LF+ ++VL ++P Q + P A+A R A+ + PLS+ A+ ++ + + PGP +C +C+E + + LSYC CG +H C QW +S+ G+ TCV+CR+
Sbjct: 86 YMIDRQRSGSELGEEFKVLGS-TGNVYTVVIDRNPRCNCPDATKGNH---CKHILFIYLKVLQVPQISPHWYQKALIGSELEEIFANAPAAPNAVANTRVRDAYAQASGRPLSSQASSSSNNGQNKRKPGPDD------DCPVCYETM--HNVQEKQLSYCEACGNCLHKDCFTQWAKSAKNGV--TCVWCRA 264
BLAST of NO06G00900 vs. NCBI_GenBank
Match: KII88331.1 (hypothetical protein PLICRDRAFT_140436, partial [Plicaturopsis crispa FD-325 SS-3]) HSP 1 Score: 67.4 bits (163), Expect = 2.000e-7 Identity = 60/215 (27.91%), Postives = 97/215 (45.12%), Query Frame = 0
Query: 493 RLVRALSQRFACISGDLRGTRGLVEEGTHNPSGTFQVSSFNSGSTYTVEFEVVNSGRGGVERKCVGTCSCPDNQKQGSRYACKHQLFVAVRVLGMT--PGMLQAGQSLPVDEFAIALDS----DRLAHLRLEPLSAAAAETARPAADLKGPGPQKLLTSELECAICFEVILEEDGSHDPLSYCVLCGQSVHTQCQEQWNRSSNCGIGGTCVYCRS 702
R+ R +SQRF + D + G + E F V ++G+ YTV + S CSCPD+QK CKH LF+ ++VL + G L + I D+ + LAH R+ A+ + ++ +++ + +C +C+E + LS+C CG ++H +C +QW RSS G TCV+CR+
Sbjct: 13 RVDRVMSQRFFMV--DRKRVNGELRE-------EFSVLG-STGNVYTVTIDKRPS------------CSCPDSQKGNH---CKHILFIYLKVLQVPQHSGHWYQKALLTSELEEIFTDAPAAPNSLAHPRVREAYQRASGKSAGSSSQDSAAKKRMPGKDDDCPVCYEAM--HSTPVPSLSFCDSCGNALHKECFQQWVRSS--GNNPTCVWCRA 198
BLAST of NO06G00900 vs. NCBI_GenBank
Match: OCB88048.1 (hypothetical protein A7U60_g4833 [Sanghuangporus baumii]) HSP 1 Score: 66.2 bits (160), Expect = 4.600e-7 Identity = 56/189 (29.63%), Postives = 86/189 (45.50%), Query Frame = 0
Query: 527 FQVSSFNSGSTYTVEFEVVNSGRGGVERKCVG---TCSCPDNQKQGSRYACKHQLFVAVRVLGMTPGMLQAGQSLPVDEFAIALDSDRLAHLRLEPLS---AAAAE--------TARPAADLKGPGPQKLLTSELECAICFEVILEEDGSHDPLSYCVLCGQSVHTQCQEQWNRSSNCGIGGTCVYCRS 702
F + SG+ EF V+ S G V + +C+CPD K CKH LF+ +V LQ QS V L S+ R P + AAA+ T + ++ +++ +++ CAIC+E + ED + L++C CG ++H +C +QW R G+ CVYCRS
Sbjct: 140 FLIDRRRSGNELREEFSVLGS-TGNVYVVTIDKLPSCTCPDAMKGNH---CKHILFIFCKV-------LQVPQSSHVWYQKALLTSELEEVFRSAPPAPNVMAAAQIRDAYNQATGKASSSASSKQNRRMPSADDSCAICYECM--EDANGSSLTWCETCGNALHKECFQQWARKK--GVDLDCVYCRS 313 The following BLAST results are available for this feature:
BLAST of NO06G00900 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 6
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G00900 ID=NO06G00900|Name=NO06G00900|organism=Nannochloropsis oceanica|type=gene|length=4022bpback to top protein sequence of NO06G00900.1 >NO06G00900.1-protein ID=NO06G00900.1-protein|Name=NO06G00900.1|organism=Nannochloropsis oceanica|type=polypeptide|length=710bpback to top protein sequence of NO06G00900.2 >NO06G00900.2-protein ID=NO06G00900.2-protein|Name=NO06G00900.2|organism=Nannochloropsis oceanica|type=polypeptide|length=785bpback to top Synonyms
Publications
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