NO06G00870, NO06G00870 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G00870 vs. NCBI_GenBank
Match: EWM26080.1 (hypothetical protein Naga_100014g38 [Nannochloropsis gaditana]) HSP 1 Score: 285.4 bits (729), Expect = 1.900e-73 Identity = 143/280 (51.07%), Postives = 187/280 (66.79%), Query Frame = 0 Query: 7 RPLAKQFRSVVSVSSHFKVPDQGMTEYELLSRGTAFCLSQPGPLPSAPEVVLVTCSHVLAPYKWRQHFKEPWLDFVNDEHVEYRIQAWKQEESDPSRIQLGAETRVYGKSVHHHSLDLCMLPIHKNTVDAYELLSLEDRDQQEPLAEGEELTFLGFPS--AINCPGEEQREKLGVLTPRRVQGRALASIRDKQGRTYAKTEERLTVGMSGGPVVDRHGRCCGIFQGILPPPPQSPAEEEAQAACDLDPTLRSLQVEEWERHAGFIPLTAVRAFLEINLVK 285 R A +R+++SVSS+FK+P+QGM +YELLS+GT FCLS GP + +V+L++CSHVLAPY+W+Q+FK+PWL FV DEHVE RI+ W E +P + E R+ G HH LDLC++P+ V+ L+ ++RD E + E E LTFLGFPS IN +K L +QG+AL S D QGRTYAKT+ERL VGMSGGPV+D GR CG+FQGILPP P++P EE QA LDP LR LQ+ E HA FIP A+R ++ ++K Sbjct: 51 RTKASHYRTILSVSSYFKLPEQGMKDYELLSQGTGFCLS--GPPALSTKVILLSCSHVLAPYRWQQYFKKPWLKFVKDEHVERRIKIWTYEAGNPEAGRWSNEARIEGTPAHHSCLDLCIIPLENGIVETCALVPYDERDDGEVMIEKENLTFLGFPSTDTINI------DKKACL--MHIQGKALLSFSDTQGRTYAKTKERLVVGMSGGPVLDGSGRFCGLFQGILPPAPRTPEEERQQADGGLDPVLRPLQIRNSELHAAFIPQFAIREYINSAVIK 320
BLAST of NO06G00870 vs. NCBI_GenBank
Match: XP_005856346.1 (hypothetical protein NGA_2002400, partial [Nannochloropsis gaditana CCMP526] >EKU20002.1 hypothetical protein NGA_2002400, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 262.7 bits (670), Expect = 1.300e-66 Identity = 132/251 (52.59%), Postives = 171/251 (68.13%), Query Frame = 0 Query: 7 RPLAKQFRSVVSVSSHFKVPDQGMTEYELLSRGTAFCLSQPGPLPSAPEVVLVTCSHVLAPYKWRQHFKEPWLDFVNDEHVEYRIQAWKQEESDPSRIQLGAETRVYGKSVHHHSLDLCMLPIHKNTVDAYELLSLEDRDQQEPLAEGEELTFLGFPS--AINCPGEEQREKLGVLTPRRVQGRALASIRDKQGRTYAKTEERLTVGMSGGPVVDRHGRCCGIFQGILPPPPQSPAEEEAQAACDLDPTLR 256 R A +R+++SVSS+FK+P+QGM +YELLS+GT FCLS GP + +V+L++CSHVLAPY+W+Q+FK+PWL+FV DEHVE RI+ W E +P + E R+ G HH LDLC++P+ V+ L+ ++RD E + E E LTFLGFPS IN +K L +QG+AL S D QGRTYAKT+ERL VGMSGGPV+D GR CG+FQGILPP P++P EE QA LDP LR Sbjct: 4 RTKASHYRTILSVSSYFKLPEQGMKDYELLSQGTGFCLS--GPPALSTKVILLSCSHVLAPYRWQQYFKKPWLEFVKDEHVERRIKIWTYEAGNPEAGRWSNEARIEGTPAHHSCLDLCIIPLEDGIVETCALVPYDERDDGEVMIEKENLTFLGFPSTDTINI------DKKACL--MHIQGKALLSFSDTQGRTYAKTKERLVVGMSGGPVLDGSGRFCGLFQGILPPAPRTPEEERQQADGGLDPVLR 244
BLAST of NO06G00870 vs. NCBI_GenBank
Match: ETI55517.1 (hypothetical protein F443_01796 [Phytophthora parasitica P1569]) HSP 1 Score: 117.9 bits (294), Expect = 5.300e-23 Identity = 86/279 (30.82%), Postives = 138/279 (49.46%), Query Frame = 0 Query: 14 RSVVSVSSHFKVPDQGMTEYELLSRGTAFCLSQPGPLPSAPEVVLVTCSHVLAPYKWRQHFKE--PWLDFVNDEHVEYRIQAWKQEESDPSRIQLGAETRVYGKSVHHHSLDLCMLPIHKNTV-----DAYELLSLEDRD-QQEPLAEGEELTFLGFPSAINCPGEEQREKLGVLTPRRVQGRALASIRDKQGRTYAKTEERLTVGMSGGPVVDRHGRCCGIFQGILPPPPQSPAE-----EEAQAACDLDPTLRSLQVEEWERHAGFIPLTAVRAFLE 280 R+V+S+++ F +P +GMT + LS G+A L ++P + +VTC HV P+ + ++F WL FVN++HV + +Q ++S+ SR ++ E + + H S DL +L + + A + L ++ QQ P G+ + FLG ++ GEE+ G P+ V G + R G+ +A ++E L GM GG VV G+C G+ +GI+P Q E EA AA + L H FIP + VR F+E Sbjct: 7 RAVLSLTTRFCLPHEGMTALDYLSSGSAVVLHD----STSPSLAVVTCQHVACPWLFPKYFTATWDWLQFVNEDHVRHSLQLLAVDDSN-SRPEVLLELPLAAQVHTHESRDLALLTLKDSAALGSWQQAEQELGVQTLTLQQPPCERGDAVVFLGHKQLVS--GEEEE---GYQIPKAVTGHFVG--RSSSGQEFAWSQELLEEGMCGGAVVGAAGQCVGVVEGIVPTIVQGDDEPEKHDREAHAAWQMRQALAG--------HVAFIPASDVRKFIE 265
BLAST of NO06G00870 vs. NCBI_GenBank
Match: ETM55029.1 (hypothetical protein L914_01704 [Phytophthora parasitica]) HSP 1 Score: 116.7 bits (291), Expect = 1.200e-22 Identity = 85/279 (30.47%), Postives = 137/279 (49.10%), Query Frame = 0 Query: 14 RSVVSVSSHFKVPDQGMTEYELLSRGTAFCLSQPGPLPSAPEVVLVTCSHVLAPYKWRQHFKE--PWLDFVNDEHVEYRIQAWKQEESDPSRIQLGAETRVYGKSVHHHSLDLCMLPIHKNTV-----DAYELLSLEDRD-QQEPLAEGEELTFLGFPSAINCPGEEQREKLGVLTPRRVQGRALASIRDKQGRTYAKTEERLTVGMSGGPVVDRHGRCCGIFQGILPPPPQSPAE-----EEAQAACDLDPTLRSLQVEEWERHAGFIPLTAVRAFLE 280 R+V+S+++ F +P +GMT + LS G+A L ++P + +VTC HV P+ + ++F WL FVN++HV + +Q ++S+ SR ++ E + + H S DL +L + + + L ++ QQ P G+ + FLG ++ GEE+ G P+ V G + R G+ +A ++E L GM GG VV G+C G+ +GI+P Q E EA AA + L H FIP + VR F+E Sbjct: 7 RAVLSLTTRFCLPHEGMTALDYLSSGSAVVLHD----STSPSLAVVTCQHVACPWLFPKYFTATWDWLQFVNEDHVRHSLQLLAVDDSN-SRPEVLLELPLAAQVHTHESRDLALLTLEDSAALGSWQQVEQELGVQTLTLQQPPCERGDAVVFLGHKQLVS--GEEEE---GYQIPKAVTGHFVG--RSSSGQEFAWSQELLEEGMCGGAVVGAAGQCVGVVEGIVPTIVQGDDEPEKHDREAHAAWQMRQALAG--------HVAFIPASDVRKFIE 265
BLAST of NO06G00870 vs. NCBI_GenBank
Match: ETK95348.1 (hypothetical protein L915_01711 [Phytophthora parasitica] >ETL48739.1 hypothetical protein L916_01683 [Phytophthora parasitica] >ETM01795.1 hypothetical protein L917_01648 [Phytophthora parasitica] >ETO84274.1 hypothetical protein F444_01797 [Phytophthora parasitica P1976] >ETP25348.1 hypothetical protein F441_01759 [Phytophthora parasitica CJ01A1] >ETP53356.1 hypothetical protein F442_01733 [Phytophthora parasitica P10297] >KUF94807.1 hypothetical protein AM587_10013283 [Phytophthora nicotianae]) HSP 1 Score: 116.3 bits (290), Expect = 1.500e-22 Identity = 85/279 (30.47%), Postives = 137/279 (49.10%), Query Frame = 0 Query: 14 RSVVSVSSHFKVPDQGMTEYELLSRGTAFCLSQPGPLPSAPEVVLVTCSHVLAPYKWRQHFKE--PWLDFVNDEHVEYRIQAWKQEESDPSRIQLGAETRVYGKSVHHHSLDLCMLPIHKNTV-----DAYELLSLEDRD-QQEPLAEGEELTFLGFPSAINCPGEEQREKLGVLTPRRVQGRALASIRDKQGRTYAKTEERLTVGMSGGPVVDRHGRCCGIFQGILPPPPQSPAE-----EEAQAACDLDPTLRSLQVEEWERHAGFIPLTAVRAFLE 280 R+V+S+++ F +P +GMT + LS G+A L ++P + +VTC HV P+ + ++F WL FVN++HV + +Q ++S+ SR ++ E + + H S DL +L + + + L ++ QQ P G+ + FLG ++ GEE+ G P+ V G + R G+ +A ++E L GM GG VV G+C G+ +GI+P Q E EA AA + L H FIP + VR F+E Sbjct: 7 RAVLSLTTRFCLPHEGMTALDYLSSGSAVVLHD----STSPSLAVVTCQHVACPWLFPKYFTATWDWLQFVNEDHVRHSLQLLAVDDSN-SRPEVLLELPLAAQVHTHESRDLALLTLKDSAALGSWQQVEQELGVQTLTLQQPPCERGDAVVFLGHKQLVS--GEEEE---GYQIPKAVTGHFVG--RSSSGQEFAWSQELLEEGMCGGAVVGAAGQCVGVVEGIVPTIVQGDDEPEKHDREAHAAWQMRQALAG--------HVAFIPASDVRKFIE 265
BLAST of NO06G00870 vs. NCBI_GenBank
Match: XP_008899198.1 (hypothetical protein PPTG_06904 [Phytophthora parasitica INRA-310] >ETN15677.1 hypothetical protein PPTG_06904 [Phytophthora parasitica INRA-310]) HSP 1 Score: 114.0 bits (284), Expect = 7.700e-22 Identity = 84/279 (30.11%), Postives = 136/279 (48.75%), Query Frame = 0 Query: 14 RSVVSVSSHFKVPDQGMTEYELLSRGTAFCLSQPGPLPSAPEVVLVTCSHVLAPYKWRQHFKE--PWLDFVNDEHVEYRIQAWKQEESDPSRIQLGAETRVYGKSVHHHSLDLCMLPIHKNTV-----DAYELLSLEDRD-QQEPLAEGEELTFLGFPSAINCPGEEQREKLGVLTPRRVQGRALASIRDKQGRTYAKTEERLTVGMSGGPVVDRHGRCCGIFQGILPPPPQSPAE-----EEAQAACDLDPTLRSLQVEEWERHAGFIPLTAVRAFLE 280 R+V+S+++ F +P +GMT + LS G+A L ++P + +VTC HV P+ + ++F WL FVN++HV + +Q ++S+ SR ++ E + + H S DL +L + + + L ++ QQ P G+ + FLG ++ GEE+ G P+ V G + R G+ +A ++E L GM GG VV +C G+ +GI+P Q E EA AA + L H FIP + VR F+E Sbjct: 7 RAVLSLTTRFCLPHEGMTALDYLSSGSAVVLHD----STSPSLAVVTCQHVACPWLFPKYFTATWDWLQFVNEDHVRHSLQLLAVDDSN-SRPEVLLELPLAAQVHTHESRDLALLTLKDSAALGSWQQVEQELGVQTLTLQQPPCERGDAVVFLGHKQLVS--GEEEE---GYQIPKAVTGHFVG--RSSSGQEFAWSQELLEEGMCGGAVVGAASQCVGVVEGIVPTIVQGDDEPEKHDREAHAAWQMRQALAG--------HVAFIPASDVRKFIE 265
BLAST of NO06G00870 vs. NCBI_GenBank
Match: EWM26118.1 (hypothetical protein Naga_100014g37 [Nannochloropsis gaditana]) HSP 1 Score: 102.8 bits (255), Expect = 1.800e-18 Identity = 72/258 (27.91%), Postives = 117/258 (45.35%), Query Frame = 0 Query: 14 RSVVSVSSHFKVPDQGMTEYELLSRGTAFCLSQPGPLPSAPEVVLVTCSHVLAPYKWRQHFKEPWLDFVNDEHVEYRIQAWKQEESDPSRIQLGAETRVY---GKSVHHHSLDLCM-----------------LPIHK-----------NTV--DAYELLSLEDRDQQEPLAEGEELTFLGFPSAINCPGEEQREKLGVLTPRR--VQGRALASIRDKQGRTYAKTEERLTVGMSGGPVVD--RHGRCCGIFQGILPP 235 R VS+SS F++ DQGM ++E+L RGTAF + P ++ TCSHV AP++W + + PWL+ V +EH + + +Q G + VHH SLD+C LP+H N V + + L+ + L++GE+ + + G + + PRR V ++ +D+Q R +A + L G+ G P++D + GRC G+ +GI+PP Sbjct: 44 RISVSISSWFRLADQGMLQHEMLCRGTAFGVQLPQRKSKHAPLIFFTCSHVAAPWRWPKLYPVPWLEHVREEHSRCVLHV--------TEVQTGRVLERFLMDSNVVHHDSLDVCALRLQDQEKVMQRMAKHGLPLHPLVLSERVPSSGNAVVSPGFAVERLQRKADDGSLSDGEDGEYTEVVEDLETGGSVRLDLRTDQEPRRLCVSLGTVSHYKDRQARGFAVMDRVLGDGVCGAPLLDLRQEGRCVGLVEGIVPP 293
BLAST of NO06G00870 vs. NCBI_GenBank
Match: XP_009527213.1 (hypothetical protein PHYSODRAFT_346301 [Phytophthora sojae] >XP_009539771.1 hypothetical protein PHYSODRAFT_566735 [Phytophthora sojae] >EGZ04795.1 hypothetical protein PHYSODRAFT_566735 [Phytophthora sojae] >EGZ18155.1 hypothetical protein PHYSODRAFT_346301 [Phytophthora sojae]) HSP 1 Score: 97.4 bits (241), Expect = 7.400e-17 Identity = 83/277 (29.96%), Postives = 122/277 (44.04%), Query Frame = 0 Query: 14 RSVVSVSSHFKVPDQGMTEYELLSRGTAFCLSQPGPLPSAPEVVLVTCSHVLAPYKWRQHFKE--PWLDFVNDEHVEYRIQAWKQEESDPSRIQLGAETRVYGKSVHHHSLDLCMLPIHKNTV--DAYELLSLEDRD-QQEPLAEGEELTFLGFPSAINCPGEEQREKLGVLTPRRVQGRALASIRDKQGRTYAKTEERLTVGMSGGPVVDRHG-RCCGIFQGILPPPPQSPAE-----EEAQAACDLDPTLRSLQVEEWERHAGFIPLTAVRAFLE 280 R+V+S+++ F +P QGM + LS G+A L + + + TC HV P+ + Q+F WL FV+++ V + +Q + P ++ E + K H S DL +L + A E L L QQ P G+ L F G Q E+ G+ P+ V G + R G+ +A + E L GM GG V+D G C GI +GI+P Q E EA AA + L H FIP VR F++ Sbjct: 7 RAVLSLTTRFCLPHQGMATLDYLSSGSAVVLRGSQDASDSSSLAVATCQHVACPWLFPQYFTATWDWLQFVSEDFVRHSLQLLAVDAPKP---EVLLELPLARKVQTHESRDLALLTLADADAWKQAEESLGLHALTLQQTPAQRGDALLF---------SGHRQLEE-GLQLPKGVDGHFVG--RSSSGQEFAWSRELLEEGMCGGAVIDAAGDECVGIVEGIVPSIGQGDDEPSLHDREAHAAWQMRQALAG--------HVAFIPAAEVRRFID 260
BLAST of NO06G00870 vs. NCBI_GenBank
Match: GAX12232.1 (hypothetical protein FisN_1Hh161 [Fistulifera solaris]) HSP 1 Score: 95.1 bits (235), Expect = 3.700e-16 Identity = 81/302 (26.82%), Postives = 119/302 (39.40%), Query Frame = 0 Query: 6 TRPLAKQFRSV--VSVSSHFKVPDQGMTEYELLSRGTAFCL-------------------------------------SQPG---------------PLPSAPEVVLVTCSHVLAPYKWRQHFKEPWLDFVNDEHVEYRIQAWKQEESDPSRIQLGAETRVYGKSVHHH--SLDLCMLPIHKNTVDAYELLSL-----EDRDQQEPLAEGEELTFLG-------------FPSAINCPGEEQREKLGVLTPRRVQGRALASIRDKQGRTYAKTEERLTVGMSGGPVVDRHGRCCGIFQGILP 234 TR L + RS+ +++S HFK P+ GM EYE+LSR TA+ + SQP P P+V +V SHVLAPY W+ ++ + WL V EH Y ++ + DP++ Q + V HH D+ ++ + + L L RD + +GE+L F G F +A + E V P QG+ D R +A T E L G+ G PV+D+ G CG +GI+P Sbjct: 4 TRTLLDKARSLKSLALSVHFKQPELGMKEYEILSRATAYLVAVDPPSEDDDDESGPYSHLKRSEKQREERLFQNLHKYSQPTGPGRQIMDLGWLEFVPREVRPQVHIVASSHVLAPYLWQDYYPQEWLKRVRAEHCTYSLEVF-----DPNKPQEALAKLALNRDVFHHPEGRDIALIHLQEEHSSLKLLRRLGVAMHRLRDPDKLYQKGEDLLFDGFVVSERNVADSESFRAAASKQNNNHNEDTRVFYPYTEQGKLAFHTND---RFFATTPEPLPEGLCGAPVLDQDGELCGTVEGIVP 297
BLAST of NO06G00870 vs. NCBI_GenBank
Match: GAX21326.1 (hypothetical protein FisN_1Lh161 [Fistulifera solaris]) HSP 1 Score: 91.3 bits (225), Expect = 5.300e-15 Identity = 81/301 (26.91%), Postives = 117/301 (38.87%), Query Frame = 0 Query: 6 TRPLAKQFRSV--VSVSSHFKVPDQGMTEYELLSRGTAFCL-------------------------------------SQPG---------------PLPSAPEVVLVTCSHVLAPYKWRQHFKEPWLDFVNDEHVEYRIQAWKQEESDPSRIQLGAETRVYGKSVHHH--SLDLCMLPIHKNTVDAYELLSL-----EDRDQQEPLAEGEELTFLGFP------------SAINCPGEEQREKLGVLTPRRVQGRALASIRDKQGRTYAKTEERLTVGMSGGPVVDRHGRCCGIFQGILP 234 TR L + RS+ +++S HFK P+ GM E E+LSR TA+ + SQP P P+V +V SHVLAPY W+ ++ + WL V EH Y ++ + DP++ Q + V HH D+ ++ + + L L RD + +GE+L F GF SA E V P QG+ D R +A T E L G+ G PV+D+ G CG +GI+P Sbjct: 4 TRTLLDRVRSLKSLALSVHFKQPELGMKENEILSRATAYLVAVDPPSDKDDDESGPYSHLKRSEKQREERLFQNLHKYSQPTGPGRQIMDLGWLEFVPREVRPQVHIVASSHVLAPYLWQDYYPQEWLKRVRAEHCTYSLEVF-----DPNKPQEALAKLALNRDVFHHPEGRDIALIHLQEEHSSLKLLRRLGVAMHRLRDPDKLYQKGEDLLFDGFVVSERNVADSESFSAAASKQNNTNEDTRVFYPYTEQGKLAFHTND---RFFATTPEPLPEGLCGAPVLDQDGDLCGTVEGIVP 296 The following BLAST results are available for this feature:
BLAST of NO06G00870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G00870 ID=NO06G00870|Name=NO06G00870|organism=Nannochloropsis oceanica|type=gene|length=858bpback to top protein sequence of NO06G00870.1 >NO06G00870.1-protein ID=NO06G00870.1-protein|Name=NO06G00870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=286bpback to top Synonyms
Publications
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