NO06G00870, NO06G00870 (gene) Nannochloropsis oceanica

Overview
NameNO06G00870
Unique NameNO06G00870
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length858
Alignment locationchr6:294636..295493 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:294636..295493 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009003Trypsin-like_Pept_dom
Homology
BLAST of NO06G00870 vs. NCBI_GenBank
Match: EWM26080.1 (hypothetical protein Naga_100014g38 [Nannochloropsis gaditana])

HSP 1 Score: 285.4 bits (729), Expect = 1.900e-73
Identity = 143/280 (51.07%), Postives = 187/280 (66.79%), Query Frame = 0
Query:    7 RPLAKQFRSVVSVSSHFKVPDQGMTEYELLSRGTAFCLSQPGPLPSAPEVVLVTCSHVLAPYKWRQHFKEPWLDFVNDEHVEYRIQAWKQEESDPSRIQLGAETRVYGKSVHHHSLDLCMLPIHKNTVDAYELLSLEDRDQQEPLAEGEELTFLGFPS--AINCPGEEQREKLGVLTPRRVQGRALASIRDKQGRTYAKTEERLTVGMSGGPVVDRHGRCCGIFQGILPPPPQSPAEEEAQAACDLDPTLRSLQVEEWERHAGFIPLTAVRAFLEINLVK 285
            R  A  +R+++SVSS+FK+P+QGM +YELLS+GT FCLS  GP   + +V+L++CSHVLAPY+W+Q+FK+PWL FV DEHVE RI+ W  E  +P   +   E R+ G   HH  LDLC++P+    V+   L+  ++RD  E + E E LTFLGFPS   IN       +K   L    +QG+AL S  D QGRTYAKT+ERL VGMSGGPV+D  GR CG+FQGILPP P++P EE  QA   LDP LR LQ+   E HA FIP  A+R ++   ++K
Sbjct:   51 RTKASHYRTILSVSSYFKLPEQGMKDYELLSQGTGFCLS--GPPALSTKVILLSCSHVLAPYRWQQYFKKPWLKFVKDEHVERRIKIWTYEAGNPEAGRWSNEARIEGTPAHHSCLDLCIIPLENGIVETCALVPYDERDDGEVMIEKENLTFLGFPSTDTINI------DKKACL--MHIQGKALLSFSDTQGRTYAKTKERLVVGMSGGPVLDGSGRFCGLFQGILPPAPRTPEEERQQADGGLDPVLRPLQIRNSELHAAFIPQFAIREYINSAVIK 320          
BLAST of NO06G00870 vs. NCBI_GenBank
Match: XP_005856346.1 (hypothetical protein NGA_2002400, partial [Nannochloropsis gaditana CCMP526] >EKU20002.1 hypothetical protein NGA_2002400, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 262.7 bits (670), Expect = 1.300e-66
Identity = 132/251 (52.59%), Postives = 171/251 (68.13%), Query Frame = 0
Query:    7 RPLAKQFRSVVSVSSHFKVPDQGMTEYELLSRGTAFCLSQPGPLPSAPEVVLVTCSHVLAPYKWRQHFKEPWLDFVNDEHVEYRIQAWKQEESDPSRIQLGAETRVYGKSVHHHSLDLCMLPIHKNTVDAYELLSLEDRDQQEPLAEGEELTFLGFPS--AINCPGEEQREKLGVLTPRRVQGRALASIRDKQGRTYAKTEERLTVGMSGGPVVDRHGRCCGIFQGILPPPPQSPAEEEAQAACDLDPTLR 256
            R  A  +R+++SVSS+FK+P+QGM +YELLS+GT FCLS  GP   + +V+L++CSHVLAPY+W+Q+FK+PWL+FV DEHVE RI+ W  E  +P   +   E R+ G   HH  LDLC++P+    V+   L+  ++RD  E + E E LTFLGFPS   IN       +K   L    +QG+AL S  D QGRTYAKT+ERL VGMSGGPV+D  GR CG+FQGILPP P++P EE  QA   LDP LR
Sbjct:    4 RTKASHYRTILSVSSYFKLPEQGMKDYELLSQGTGFCLS--GPPALSTKVILLSCSHVLAPYRWQQYFKKPWLEFVKDEHVERRIKIWTYEAGNPEAGRWSNEARIEGTPAHHSCLDLCIIPLEDGIVETCALVPYDERDDGEVMIEKENLTFLGFPSTDTINI------DKKACL--MHIQGKALLSFSDTQGRTYAKTKERLVVGMSGGPVLDGSGRFCGLFQGILPPAPRTPEEERQQADGGLDPVLR 244          
BLAST of NO06G00870 vs. NCBI_GenBank
Match: ETI55517.1 (hypothetical protein F443_01796 [Phytophthora parasitica P1569])

HSP 1 Score: 117.9 bits (294), Expect = 5.300e-23
Identity = 86/279 (30.82%), Postives = 138/279 (49.46%), Query Frame = 0
Query:   14 RSVVSVSSHFKVPDQGMTEYELLSRGTAFCLSQPGPLPSAPEVVLVTCSHVLAPYKWRQHFKE--PWLDFVNDEHVEYRIQAWKQEESDPSRIQLGAETRVYGKSVHHHSLDLCMLPIHKNTV-----DAYELLSLEDRD-QQEPLAEGEELTFLGFPSAINCPGEEQREKLGVLTPRRVQGRALASIRDKQGRTYAKTEERLTVGMSGGPVVDRHGRCCGIFQGILPPPPQSPAE-----EEAQAACDLDPTLRSLQVEEWERHAGFIPLTAVRAFLE 280
            R+V+S+++ F +P +GMT  + LS G+A  L       ++P + +VTC HV  P+ + ++F     WL FVN++HV + +Q    ++S+ SR ++  E  +  +   H S DL +L +  +        A + L ++    QQ P   G+ + FLG    ++  GEE+    G   P+ V G  +   R   G+ +A ++E L  GM GG VV   G+C G+ +GI+P   Q   E      EA AA  +   L          H  FIP + VR F+E
Sbjct:    7 RAVLSLTTRFCLPHEGMTALDYLSSGSAVVLHD----STSPSLAVVTCQHVACPWLFPKYFTATWDWLQFVNEDHVRHSLQLLAVDDSN-SRPEVLLELPLAAQVHTHESRDLALLTLKDSAALGSWQQAEQELGVQTLTLQQPPCERGDAVVFLGHKQLVS--GEEEE---GYQIPKAVTGHFVG--RSSSGQEFAWSQELLEEGMCGGAVVGAAGQCVGVVEGIVPTIVQGDDEPEKHDREAHAAWQMRQALAG--------HVAFIPASDVRKFIE 265          
BLAST of NO06G00870 vs. NCBI_GenBank
Match: ETM55029.1 (hypothetical protein L914_01704 [Phytophthora parasitica])

HSP 1 Score: 116.7 bits (291), Expect = 1.200e-22
Identity = 85/279 (30.47%), Postives = 137/279 (49.10%), Query Frame = 0
Query:   14 RSVVSVSSHFKVPDQGMTEYELLSRGTAFCLSQPGPLPSAPEVVLVTCSHVLAPYKWRQHFKE--PWLDFVNDEHVEYRIQAWKQEESDPSRIQLGAETRVYGKSVHHHSLDLCMLPIHKNTV-----DAYELLSLEDRD-QQEPLAEGEELTFLGFPSAINCPGEEQREKLGVLTPRRVQGRALASIRDKQGRTYAKTEERLTVGMSGGPVVDRHGRCCGIFQGILPPPPQSPAE-----EEAQAACDLDPTLRSLQVEEWERHAGFIPLTAVRAFLE 280
            R+V+S+++ F +P +GMT  + LS G+A  L       ++P + +VTC HV  P+ + ++F     WL FVN++HV + +Q    ++S+ SR ++  E  +  +   H S DL +L +  +          + L ++    QQ P   G+ + FLG    ++  GEE+    G   P+ V G  +   R   G+ +A ++E L  GM GG VV   G+C G+ +GI+P   Q   E      EA AA  +   L          H  FIP + VR F+E
Sbjct:    7 RAVLSLTTRFCLPHEGMTALDYLSSGSAVVLHD----STSPSLAVVTCQHVACPWLFPKYFTATWDWLQFVNEDHVRHSLQLLAVDDSN-SRPEVLLELPLAAQVHTHESRDLALLTLEDSAALGSWQQVEQELGVQTLTLQQPPCERGDAVVFLGHKQLVS--GEEEE---GYQIPKAVTGHFVG--RSSSGQEFAWSQELLEEGMCGGAVVGAAGQCVGVVEGIVPTIVQGDDEPEKHDREAHAAWQMRQALAG--------HVAFIPASDVRKFIE 265          
BLAST of NO06G00870 vs. NCBI_GenBank
Match: ETK95348.1 (hypothetical protein L915_01711 [Phytophthora parasitica] >ETL48739.1 hypothetical protein L916_01683 [Phytophthora parasitica] >ETM01795.1 hypothetical protein L917_01648 [Phytophthora parasitica] >ETO84274.1 hypothetical protein F444_01797 [Phytophthora parasitica P1976] >ETP25348.1 hypothetical protein F441_01759 [Phytophthora parasitica CJ01A1] >ETP53356.1 hypothetical protein F442_01733 [Phytophthora parasitica P10297] >KUF94807.1 hypothetical protein AM587_10013283 [Phytophthora nicotianae])

HSP 1 Score: 116.3 bits (290), Expect = 1.500e-22
Identity = 85/279 (30.47%), Postives = 137/279 (49.10%), Query Frame = 0
Query:   14 RSVVSVSSHFKVPDQGMTEYELLSRGTAFCLSQPGPLPSAPEVVLVTCSHVLAPYKWRQHFKE--PWLDFVNDEHVEYRIQAWKQEESDPSRIQLGAETRVYGKSVHHHSLDLCMLPIHKNTV-----DAYELLSLEDRD-QQEPLAEGEELTFLGFPSAINCPGEEQREKLGVLTPRRVQGRALASIRDKQGRTYAKTEERLTVGMSGGPVVDRHGRCCGIFQGILPPPPQSPAE-----EEAQAACDLDPTLRSLQVEEWERHAGFIPLTAVRAFLE 280
            R+V+S+++ F +P +GMT  + LS G+A  L       ++P + +VTC HV  P+ + ++F     WL FVN++HV + +Q    ++S+ SR ++  E  +  +   H S DL +L +  +          + L ++    QQ P   G+ + FLG    ++  GEE+    G   P+ V G  +   R   G+ +A ++E L  GM GG VV   G+C G+ +GI+P   Q   E      EA AA  +   L          H  FIP + VR F+E
Sbjct:    7 RAVLSLTTRFCLPHEGMTALDYLSSGSAVVLHD----STSPSLAVVTCQHVACPWLFPKYFTATWDWLQFVNEDHVRHSLQLLAVDDSN-SRPEVLLELPLAAQVHTHESRDLALLTLKDSAALGSWQQVEQELGVQTLTLQQPPCERGDAVVFLGHKQLVS--GEEEE---GYQIPKAVTGHFVG--RSSSGQEFAWSQELLEEGMCGGAVVGAAGQCVGVVEGIVPTIVQGDDEPEKHDREAHAAWQMRQALAG--------HVAFIPASDVRKFIE 265          
BLAST of NO06G00870 vs. NCBI_GenBank
Match: XP_008899198.1 (hypothetical protein PPTG_06904 [Phytophthora parasitica INRA-310] >ETN15677.1 hypothetical protein PPTG_06904 [Phytophthora parasitica INRA-310])

HSP 1 Score: 114.0 bits (284), Expect = 7.700e-22
Identity = 84/279 (30.11%), Postives = 136/279 (48.75%), Query Frame = 0
Query:   14 RSVVSVSSHFKVPDQGMTEYELLSRGTAFCLSQPGPLPSAPEVVLVTCSHVLAPYKWRQHFKE--PWLDFVNDEHVEYRIQAWKQEESDPSRIQLGAETRVYGKSVHHHSLDLCMLPIHKNTV-----DAYELLSLEDRD-QQEPLAEGEELTFLGFPSAINCPGEEQREKLGVLTPRRVQGRALASIRDKQGRTYAKTEERLTVGMSGGPVVDRHGRCCGIFQGILPPPPQSPAE-----EEAQAACDLDPTLRSLQVEEWERHAGFIPLTAVRAFLE 280
            R+V+S+++ F +P +GMT  + LS G+A  L       ++P + +VTC HV  P+ + ++F     WL FVN++HV + +Q    ++S+ SR ++  E  +  +   H S DL +L +  +          + L ++    QQ P   G+ + FLG    ++  GEE+    G   P+ V G  +   R   G+ +A ++E L  GM GG VV    +C G+ +GI+P   Q   E      EA AA  +   L          H  FIP + VR F+E
Sbjct:    7 RAVLSLTTRFCLPHEGMTALDYLSSGSAVVLHD----STSPSLAVVTCQHVACPWLFPKYFTATWDWLQFVNEDHVRHSLQLLAVDDSN-SRPEVLLELPLAAQVHTHESRDLALLTLKDSAALGSWQQVEQELGVQTLTLQQPPCERGDAVVFLGHKQLVS--GEEEE---GYQIPKAVTGHFVG--RSSSGQEFAWSQELLEEGMCGGAVVGAASQCVGVVEGIVPTIVQGDDEPEKHDREAHAAWQMRQALAG--------HVAFIPASDVRKFIE 265          
BLAST of NO06G00870 vs. NCBI_GenBank
Match: EWM26118.1 (hypothetical protein Naga_100014g37 [Nannochloropsis gaditana])

HSP 1 Score: 102.8 bits (255), Expect = 1.800e-18
Identity = 72/258 (27.91%), Postives = 117/258 (45.35%), Query Frame = 0
Query:   14 RSVVSVSSHFKVPDQGMTEYELLSRGTAFCLSQPGPLPSAPEVVLVTCSHVLAPYKWRQHFKEPWLDFVNDEHVEYRIQAWKQEESDPSRIQLGAETRVY---GKSVHHHSLDLCM-----------------LPIHK-----------NTV--DAYELLSLEDRDQQEPLAEGEELTFLGFPSAINCPGEEQREKLGVLTPRR--VQGRALASIRDKQGRTYAKTEERLTVGMSGGPVVD--RHGRCCGIFQGILPP 235
            R  VS+SS F++ DQGM ++E+L RGTAF +  P        ++  TCSHV AP++W + +  PWL+ V +EH    +          + +Q G     +      VHH SLD+C                  LP+H            N V    + +  L+ +     L++GE+  +      +   G  + +      PRR  V    ++  +D+Q R +A  +  L  G+ G P++D  + GRC G+ +GI+PP
Sbjct:   44 RISVSISSWFRLADQGMLQHEMLCRGTAFGVQLPQRKSKHAPLIFFTCSHVAAPWRWPKLYPVPWLEHVREEHSRCVLHV--------TEVQTGRVLERFLMDSNVVHHDSLDVCALRLQDQEKVMQRMAKHGLPLHPLVLSERVPSSGNAVVSPGFAVERLQRKADDGSLSDGEDGEYTEVVEDLETGGSVRLDLRTDQEPRRLCVSLGTVSHYKDRQARGFAVMDRVLGDGVCGAPLLDLRQEGRCVGLVEGIVPP 293          
BLAST of NO06G00870 vs. NCBI_GenBank
Match: XP_009527213.1 (hypothetical protein PHYSODRAFT_346301 [Phytophthora sojae] >XP_009539771.1 hypothetical protein PHYSODRAFT_566735 [Phytophthora sojae] >EGZ04795.1 hypothetical protein PHYSODRAFT_566735 [Phytophthora sojae] >EGZ18155.1 hypothetical protein PHYSODRAFT_346301 [Phytophthora sojae])

HSP 1 Score: 97.4 bits (241), Expect = 7.400e-17
Identity = 83/277 (29.96%), Postives = 122/277 (44.04%), Query Frame = 0
Query:   14 RSVVSVSSHFKVPDQGMTEYELLSRGTAFCLSQPGPLPSAPEVVLVTCSHVLAPYKWRQHFKE--PWLDFVNDEHVEYRIQAWKQEESDPSRIQLGAETRVYGKSVHHHSLDLCMLPIHKNTV--DAYELLSLEDRD-QQEPLAEGEELTFLGFPSAINCPGEEQREKLGVLTPRRVQGRALASIRDKQGRTYAKTEERLTVGMSGGPVVDRHG-RCCGIFQGILPPPPQSPAE-----EEAQAACDLDPTLRSLQVEEWERHAGFIPLTAVRAFLE 280
            R+V+S+++ F +P QGM   + LS G+A  L        +  + + TC HV  P+ + Q+F     WL FV+++ V + +Q    +   P   ++  E  +  K   H S DL +L +        A E L L     QQ P   G+ L F          G  Q E+ G+  P+ V G  +   R   G+ +A + E L  GM GG V+D  G  C GI +GI+P   Q   E      EA AA  +   L          H  FIP   VR F++
Sbjct:    7 RAVLSLTTRFCLPHQGMATLDYLSSGSAVVLRGSQDASDSSSLAVATCQHVACPWLFPQYFTATWDWLQFVSEDFVRHSLQLLAVDAPKP---EVLLELPLARKVQTHESRDLALLTLADADAWKQAEESLGLHALTLQQTPAQRGDALLF---------SGHRQLEE-GLQLPKGVDGHFVG--RSSSGQEFAWSRELLEEGMCGGAVIDAAGDECVGIVEGIVPSIGQGDDEPSLHDREAHAAWQMRQALAG--------HVAFIPAAEVRRFID 260          
BLAST of NO06G00870 vs. NCBI_GenBank
Match: GAX12232.1 (hypothetical protein FisN_1Hh161 [Fistulifera solaris])

HSP 1 Score: 95.1 bits (235), Expect = 3.700e-16
Identity = 81/302 (26.82%), Postives = 119/302 (39.40%), Query Frame = 0
Query:    6 TRPLAKQFRSV--VSVSSHFKVPDQGMTEYELLSRGTAFCL-------------------------------------SQPG---------------PLPSAPEVVLVTCSHVLAPYKWRQHFKEPWLDFVNDEHVEYRIQAWKQEESDPSRIQLGAETRVYGKSVHHH--SLDLCMLPIHKNTVDAYELLSL-----EDRDQQEPLAEGEELTFLG-------------FPSAINCPGEEQREKLGVLTPRRVQGRALASIRDKQGRTYAKTEERLTVGMSGGPVVDRHGRCCGIFQGILP 234
            TR L  + RS+  +++S HFK P+ GM EYE+LSR TA+ +                                     SQP                P    P+V +V  SHVLAPY W+ ++ + WL  V  EH  Y ++ +     DP++ Q         + V HH    D+ ++ + +       L  L       RD  +   +GE+L F G             F +A +       E   V  P   QG+      D   R +A T E L  G+ G PV+D+ G  CG  +GI+P
Sbjct:    4 TRTLLDKARSLKSLALSVHFKQPELGMKEYEILSRATAYLVAVDPPSEDDDDESGPYSHLKRSEKQREERLFQNLHKYSQPTGPGRQIMDLGWLEFVPREVRPQVHIVASSHVLAPYLWQDYYPQEWLKRVRAEHCTYSLEVF-----DPNKPQEALAKLALNRDVFHHPEGRDIALIHLQEEHSSLKLLRRLGVAMHRLRDPDKLYQKGEDLLFDGFVVSERNVADSESFRAAASKQNNNHNEDTRVFYPYTEQGKLAFHTND---RFFATTPEPLPEGLCGAPVLDQDGELCGTVEGIVP 297          
BLAST of NO06G00870 vs. NCBI_GenBank
Match: GAX21326.1 (hypothetical protein FisN_1Lh161 [Fistulifera solaris])

HSP 1 Score: 91.3 bits (225), Expect = 5.300e-15
Identity = 81/301 (26.91%), Postives = 117/301 (38.87%), Query Frame = 0
Query:    6 TRPLAKQFRSV--VSVSSHFKVPDQGMTEYELLSRGTAFCL-------------------------------------SQPG---------------PLPSAPEVVLVTCSHVLAPYKWRQHFKEPWLDFVNDEHVEYRIQAWKQEESDPSRIQLGAETRVYGKSVHHH--SLDLCMLPIHKNTVDAYELLSL-----EDRDQQEPLAEGEELTFLGFP------------SAINCPGEEQREKLGVLTPRRVQGRALASIRDKQGRTYAKTEERLTVGMSGGPVVDRHGRCCGIFQGILP 234
            TR L  + RS+  +++S HFK P+ GM E E+LSR TA+ +                                     SQP                P    P+V +V  SHVLAPY W+ ++ + WL  V  EH  Y ++ +     DP++ Q         + V HH    D+ ++ + +       L  L       RD  +   +GE+L F GF             SA         E   V  P   QG+      D   R +A T E L  G+ G PV+D+ G  CG  +GI+P
Sbjct:    4 TRTLLDRVRSLKSLALSVHFKQPELGMKENEILSRATAYLVAVDPPSDKDDDESGPYSHLKRSEKQREERLFQNLHKYSQPTGPGRQIMDLGWLEFVPREVRPQVHIVASSHVLAPYLWQDYYPQEWLKRVRAEHCTYSLEVF-----DPNKPQEALAKLALNRDVFHHPEGRDIALIHLQEEHSSLKLLRRLGVAMHRLRDPDKLYQKGEDLLFDGFVVSERNVADSESFSAAASKQNNTNEDTRVFYPYTEQGKLAFHTND---RFFATTPEPLPEGLCGAPVLDQDGDLCGTVEGIVP 296          
The following BLAST results are available for this feature:
BLAST of NO06G00870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26080.11.900e-7351.07hypothetical protein Naga_100014g38 [Nannochlorops... [more]
XP_005856346.11.300e-6652.59hypothetical protein NGA_2002400, partial [Nannoch... [more]
ETI55517.15.300e-2330.82hypothetical protein F443_01796 [Phytophthora para... [more]
ETM55029.11.200e-2230.47hypothetical protein L914_01704 [Phytophthora para... [more]
ETK95348.11.500e-2230.47hypothetical protein L915_01711 [Phytophthora para... [more]
XP_008899198.17.700e-2230.11hypothetical protein PPTG_06904 [Phytophthora para... [more]
EWM26118.11.800e-1827.91hypothetical protein Naga_100014g37 [Nannochlorops... [more]
XP_009527213.17.400e-1729.96hypothetical protein PHYSODRAFT_346301 [Phytophtho... [more]
GAX12232.13.700e-1626.82hypothetical protein FisN_1Hh161 [Fistulifera sola... [more]
GAX21326.15.300e-1526.91hypothetical protein FisN_1Lh161 [Fistulifera sola... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000363NSK000363Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G00870.1NO06G00870.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100014g37gene4398Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G00870.1NO06G00870.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G00870 ID=NO06G00870|Name=NO06G00870|organism=Nannochloropsis oceanica|type=gene|length=858bp
ATGCCATGGACCAAGACAAGACCCCTAGCCAAGCAGTTCCGCAGTGTTGT
TAGCGTCTCGTCACATTTCAAGGTCCCAGATCAAGGCATGACGGAGTACG
AGCTGCTCAGCCGGGGCACTGCCTTTTGCCTCTCCCAACCTGGCCCTCTT
CCTTCTGCTCCTGAAGTCGTCCTCGTAACCTGCTCCCACGTCCTGGCACC
CTATAAATGGCGACAGCATTTTAAAGAACCGTGGCTTGACTTTGTAAATG
ACGAGCACGTCGAGTACCGAATTCAGGCGTGGAAACAGGAGGAGAGCGAC
CCCAGCAGAATTCAGCTGGGTGCCGAGACGAGGGTGTACGGCAAGTCAGT
TCACCACCATAGTCTAGACTTATGTATGCTACCTATACATAAGAATACAG
TAGATGCATATGAATTACTATCATTGGAGGACAGGGACCAACAAGAGCCC
CTTGCAGAGGGCGAGGAATTGACATTTCTAGGCTTTCCCTCCGCCATAAA
CTGTCCTGGCGAGGAACAGCGCGAGAAGCTTGGCGTGCTAACCCCACGTC
GAGTGCAAGGGCGGGCGCTCGCATCGATCCGCGACAAACAGGGTCGAACT
TATGCCAAGACAGAAGAGAGACTGACGGTGGGCATGAGTGGTGGGCCGGT
GGTCGATCGGCACGGGCGATGTTGCGGCATCTTTCAAGGCATTCTGCCCC
CGCCGCCTCAATCCCCCGCAGAAGAAGAGGCGCAAGCCGCCTGTGACCTC
GACCCTACGCTTCGGTCACTTCAAGTAGAAGAATGGGAACGGCATGCCGG
GTTCATCCCCCTGACGGCTGTCCGTGCATTTCTTGAAATTAATTTAGTCA
AATATTGA
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protein sequence of NO06G00870.1

>NO06G00870.1-protein ID=NO06G00870.1-protein|Name=NO06G00870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=286bp
MPWTKTRPLAKQFRSVVSVSSHFKVPDQGMTEYELLSRGTAFCLSQPGPL
PSAPEVVLVTCSHVLAPYKWRQHFKEPWLDFVNDEHVEYRIQAWKQEESD
PSRIQLGAETRVYGKSVHHHSLDLCMLPIHKNTVDAYELLSLEDRDQQEP
LAEGEELTFLGFPSAINCPGEEQREKLGVLTPRRVQGRALASIRDKQGRT
YAKTEERLTVGMSGGPVVDRHGRCCGIFQGILPPPPQSPAEEEAQAACDL
DPTLRSLQVEEWERHAGFIPLTAVRAFLEINLVKY*
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Synonyms
Publications