NO06G00860, NO06G00860 (gene) Nannochloropsis oceanica

Overview
NameNO06G00860
Unique NameNO06G00860
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2226
Alignment locationchr6:292104..294329 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:292104..294329 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO06G00860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000365NSK000365Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G00860.1NO06G00860.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G00860.1NO06G00860.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G00860 ID=NO06G00860|Name=NO06G00860|organism=Nannochloropsis oceanica|type=gene|length=2226bp
ATGAATAGCCGTCATCACGGGCATTCGCAACAGCGGGAAGAGGATGAGAT
GGTGGAGGAGCTGAGGGCCGAGAATAGCTTCTTGGAGGACCAACTCCAAC
GCTGCATCAAGGAGCTCAAAGCCTACCAGCTCAAAACCAACAATGGTGCC
CACATGCGGTCTCAAGCCGAGAGAATGCCTGATTTGCCTATCTGGAACAC
CAGCGCAGCCGCCATGACACCGTTGATGGCTGCCTATGACGCGCGGATCA
AGGAGCTTGAGGAGTTGAATCAATTGCAGGCTGGAAAGCTGGAGTGCTTG
GCAGGGCGGGCCGAAGTATTGGCTCTGGAAAATGAGGAACTTCACCAAGC
TGCCTTTGCCCGTGCGGAGAGGCATTACGATAAGATGAGTCTTCGGTCGC
AAGAGCTTTCTGGAAATGATTTTCTGGGCAGTAAATTTAGCGAAACCGAC
GAAGGGGAGGAGGAAGGGGATGACAGTCTTGCACTGGCCATCGGAGACGA
AGCCGTGGCGGAGCTGGTGCAGCAGTCCGGGTTTCTGCGTGCCGAAAATG
CCATGCTTTTGGAGAAAACCAACCTGGCCGCCCTTGAATTGTCTCAGACT
AGCCGGACATTGGCGGAGAGAGACGTGCAGATTGACGAGCTGCTCCACGA
GCTGATGAAGGCGGGGCCGCAGCTGCAGGAACAGCAGCAGGAATTGGCGG
CGTTGCGGCAAGCCCAAGCCGAGCAGCACCAAGAGCCAAACCAACGCGGC
AACTCTGCGACAACGATGTTGGAAGAAATTTTGGGAAAGACCAAGGCTGC
CTTGGCGGCCGCCGATAACAAATGCCAGTCGTTGGAGGAGCACTTGCGCG
AAGCCCAGCAAAGCGCACAGAGCCGAGAGGCGAAGTGGACTGAACAATAC
AATAAATTAGAAATACGATGCCGAGACGCTGAAATATGCCTCCCCCGGTT
GCGTACGCAGCTAGCAAATATGGCTGGAGAGACTCAGAGGGTCTGCGCTC
AGCTCGAGGAGGCCGAGGCAGTGCGCGCGGAGCTCACAGAGGTGACGGCA
GCGCTGAAGGTCACGCAGCAGGACGCTGCAGAGATGGTGCGTGTGGTGGA
GGAGCTTCAAGCTCAAGTCGAGGCTTATGAGGCCCGGGAGGAGGAGATGA
CTGGCATGGTAGGGCGGTATCGAGAACAAGCGCAGGAGGCCTTGCGGCAG
TGTGAGGTAGCGTCTGAAGGAGAGGTGCAAGCCCGTCGAGAACTGCGCCG
TATCCTCGAAGCTCAACAAGAATCGATGAATGGCCTGAACGCTGATATAG
AAGAGAAGGTGATACGTGGCAAGTCTCAGCTGATGGAGCAATACGAGCGG
CGCGAGCAGGAACTCAAGGCGGAGGCCGAGCGTGCGCTGCGTATGCGGGT
GGAGGTGCAGCAAGCGGGATGGGAAAAACATCGGAGCGAAACCTTATACG
CGGAACTGTGCACGGTCGTAAAAGACGAACAAGGCGGGGTCCGACAGCAG
TTGCTGGATCTAAGTCGACGATTGACGGAAAGTGAAGTGGCGCGAGGAAA
AGCGGAAGTGAAGGCCATATCGCTGGTCCACGAGAAGCAACAATTCCGGC
ATGAAGCGGCTGCGCGAGAGGAAAAATGGGTACATGCCAAGCGGCGTTTG
GTGGAGAACCTACAAGCACGTGACGTGGAGCTCGCGGCAGTGAGGGAGCA
ATTGTCTACCGTCGAGGCCACGCTAGGATCCAAAACCCGAGAGGTGGCTC
GATTGCAGCGCCAGCGGGAAAAGTCCGAGAGTGCATGGCAAGTCAAATTG
GAGGGGCTCCAAGAGTCTTACCAGCAGCAGGCAAAGGCAACGGCGCTCAA
GCTACTAAAGGCCGAAACATGGCTCCGCGAACAAGACCCCGCCATCTGCG
ATTTTCAGGCGCGCCATGCCCGAATACTGCAGCGTATTCGGACAGAGCAC
AAGGGCGTAATCGATGAGCTCCATCGGGGACTGTGGCACGAAAGAGAAGC
TCTGCAGCGCGCAAACCAAGAAAAAGAGGCCCTGCTATTCCAGCTCACAT
CCACAACTCACGACCTCAATATGAGCAAGCAGCAGCTGGCCCGCCTAAGA
CACGATCTCCACGTCACCACACAGCAAGTATCTGAATTGAGTGGTCAGCT
CTGTGACAGTATAAGCACACAACAGCACATGGCGAAGGACGAGACCCGAC
TGCGCGCCAACATCAAGAGCAAGTAG
back to top

protein sequence of NO06G00860.1

>NO06G00860.1-protein ID=NO06G00860.1-protein|Name=NO06G00860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=742bp
MNSRHHGHSQQREEDEMVEELRAENSFLEDQLQRCIKELKAYQLKTNNGA
HMRSQAERMPDLPIWNTSAAAMTPLMAAYDARIKELEELNQLQAGKLECL
AGRAEVLALENEELHQAAFARAERHYDKMSLRSQELSGNDFLGSKFSETD
EGEEEGDDSLALAIGDEAVAELVQQSGFLRAENAMLLEKTNLAALELSQT
SRTLAERDVQIDELLHELMKAGPQLQEQQQELAALRQAQAEQHQEPNQRG
NSATTMLEEILGKTKAALAAADNKCQSLEEHLREAQQSAQSREAKWTEQY
NKLEIRCRDAEICLPRLRTQLANMAGETQRVCAQLEEAEAVRAELTEVTA
ALKVTQQDAAEMVRVVEELQAQVEAYEAREEEMTGMVGRYREQAQEALRQ
CEVASEGEVQARRELRRILEAQQESMNGLNADIEEKVIRGKSQLMEQYER
REQELKAEAERALRMRVEVQQAGWEKHRSETLYAELCTVVKDEQGGVRQQ
LLDLSRRLTESEVARGKAEVKAISLVHEKQQFRHEAAAREEKWVHAKRRL
VENLQARDVELAAVREQLSTVEATLGSKTREVARLQRQREKSESAWQVKL
EGLQESYQQQAKATALKLLKAETWLREQDPAICDFQARHARILQRIRTEH
KGVIDELHRGLWHEREALQRANQEKEALLFQLTSTTHDLNMSKQQLARLR
HDLHVTTQQVSELSGQLCDSISTQQHMAKDETRLRANIKSK*
back to top
Synonyms
Publications