NO06G00850, NO06G00850 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G00850 vs. NCBI_GenBank
Match: EWM26103.1 (phd-finger family homeodomain protein [Nannochloropsis gaditana]) HSP 1 Score: 270.0 bits (689), Expect = 3.000e-68 Identity = 138/260 (53.08%), Postives = 177/260 (68.08%), Query Frame = 0 Query: 551 FTPHMTRSKSKGKKSSRLAKKERRVYGKHDFFVSSFTXXXXXXXXXXXXXXXXXGETEGKIKRGRPRKXXXXXXXXXXXEMGKRGPEQVLEGRAKKHLKILSDNLFKLRTLTDRWAGTESVELDGRHVPLREMMSEAEAKVSVAKKGLRMVMDELQRLHEDAQLDDSDWEEEDAVCAVCGDGDATDENDIAVCDKCLVPFHQHCHVPMLTEEDLGEEDEEWWCRRCDLIYDWMSNCVLDAFGVDEERARTFRKVQGLLKD 811 F P TRS+++ K+SSRLA+K+RRVYGK F V + TE + R R R+ + + PE +L RAK+HLK L DNLF L+ L+DRWAGT +VE D RHVPLR+ +EAEAK++ AK+ LR M +L L+++ L+DSDWE E+A CAVCG G+ATDENDIA+CDKC VP+HQ CH P L EDLGEE++EWWC RC+L+YD +SN VLDA+GV+EERARTFR+VQ LL+D Sbjct: 463 FPPLQTRSRTRVKRSSRLARKDRRVYGKDGFRVVTQESCAEL-------------PTEARAGRKRMRRKRRAWVKGV---VTVQAPEDILGQRAKRHLKALGDNLFTLKALSDRWAGTANVEADERHVPLRQTRTEAEAKLTTAKRQLRESMAQLLNLYKEEALEDSDWEAEEATCAVCGGGEATDENDIAICDKCRVPYHQDCHAPPLRPEDLGEEEDEWWCSRCELVYDRLSNAVLDAYGVEEERARTFRRVQSLLED 706
BLAST of NO06G00850 vs. NCBI_GenBank
Match: XP_003059740.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH55692.1 predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 74.3 bits (181), Expect = 2.400e-9 Identity = 46/127 (36.22%), Postives = 64/127 (50.39%), Query Frame = 0 Query: 669 ESVELDGRHVPLREMMSEAE----AKVSVAKKGLR---------MVMDELQRLHEDAQLDDSDWEEEDAVCAVCGDGDATDENDIAVCDK-CLVPFHQHCHVPMLTEEDLGEEDEEWWCRRCDLIYD 782 ++ ++DG RE + AE AK+ + LR + MD + LH +D + + ED C CGDG++TD+NDI +CD C FHQ C VP + ED+ E DE W C CD D Sbjct: 110 DAYDMDGWRGASREKLRPAEEIRKAKIKIFNAKLRVRELFKHIDLAMDGARDLHAITD-EDGELDAEDVFCCACGDGESTDDNDILLCDGFCDRGFHQRCCVPPVRTEDIPEGDEGWLCALCDARVD 235
BLAST of NO06G00850 vs. NCBI_GenBank
Match: XP_005840156.1 (hypothetical protein GUITHDRAFT_132940 [Guillardia theta CCMP2712] >EKX53176.1 hypothetical protein GUITHDRAFT_132940 [Guillardia theta CCMP2712]) HSP 1 Score: 68.9 bits (167), Expect = 1.000e-7 Identity = 53/177 (29.94%), Postives = 87/177 (49.15%), Query Frame = 0 Query: 637 EQVLEGRAKKHLKILSDNLFKLRTLTDRWAGT--ESVELDG-------RHVPLREMMSEAEAKVSVAKKGLRMVMDEL-----QRLHEDAQLDDSDWEE-----EDAVCAVCGDGDATDENDIAVCD--KCLVPFHQHCHVPMLTEEDLGEEDEEWWCRRCDLIYDWMSNCVLDAFG 793 + LE + L+I N K R R+ T ++ E DG + P E+ +E+ + AKK ++ ++ ++ + ++ ++D+ ++E E VC++CG GDA NDI +CD +C FHQ CH P +TE L +DE+W+C C L Y V + FG Sbjct: 122 DPTLENSGHRALRI--RNRIKTRLTNARYFQTMLDAYEQDGWGPSSHRKLKPTEELKKSSESLIH-AKKEIKELLKQMDPASNELAQKETRIDEREYEAEGLAFEKIVCSICGTGDARRGNDILLCDYSECNRAFHQKCHHPQVTE--LPHDDEDWFCTHC-LCYTDCIEAVNELFG 292
BLAST of NO06G00850 vs. NCBI_GenBank
Match: XP_008373076.1 (PREDICTED: homeobox protein HAT3.1-like isoform X1 [Malus domestica] >XP_017188016.1 PREDICTED: homeobox protein HAT3.1-like isoform X1 [Malus domestica]) HSP 1 Score: 68.9 bits (167), Expect = 1.000e-7 Identity = 48/169 (28.40%), Postives = 77/169 (45.56%), Query Frame = 0 Query: 643 RAKKHLKILSDNLFKLRTLTDRWAGTESVELDGRHVPLREMMSEAEAKVSVAKKGLRMVMDELQRLHEDAQLDDS------DWEEEDAVCAVCGDGDATDENDIAVCD-KCLVPFHQHCHVPMLTEEDLGEEDEEWWCRRCDLIYDWMSNCVLDAFGVDEERARTFRKV 805 R +KHL+ L + + ++L D ++G + + + A +++ K +R + L L + +S + ED CA CG D + +NDI +CD C FHQ C P L ED+ +DE W C CD D + + D+ G D A ++ KV Sbjct: 444 RVRKHLRYLLNRISYEKSLIDAYSGEGWKGSSLEKLKPEKELQRATSEILQRKLKIRDLFQRLDSLCSEGMFPESLFDSEGQIDSEDIFCAKCGSKDVSLQNDIILCDGACDRGFHQFCLEPPLLSEDIPPDDEGWLCPGCDCKVDCF-DLLNDSQGTDLSVADSWEKV 611
BLAST of NO06G00850 vs. NCBI_GenBank
Match: XP_008373077.1 (PREDICTED: homeobox protein HAT3.1-like isoform X2 [Malus domestica]) HSP 1 Score: 68.9 bits (167), Expect = 1.000e-7 Identity = 48/169 (28.40%), Postives = 77/169 (45.56%), Query Frame = 0 Query: 643 RAKKHLKILSDNLFKLRTLTDRWAGTESVELDGRHVPLREMMSEAEAKVSVAKKGLRMVMDELQRLHEDAQLDDS------DWEEEDAVCAVCGDGDATDENDIAVCD-KCLVPFHQHCHVPMLTEEDLGEEDEEWWCRRCDLIYDWMSNCVLDAFGVDEERARTFRKV 805 R +KHL+ L + + ++L D ++G + + + A +++ K +R + L L + +S + ED CA CG D + +NDI +CD C FHQ C P L ED+ +DE W C CD D + + D+ G D A ++ KV Sbjct: 444 RVRKHLRYLLNRISYEKSLIDAYSGEGWKGSSLEKLKPEKELQRATSEILQRKLKIRDLFQRLDSLCSEGMFPESLFDSEGQIDSEDIFCAKCGSKDVSLQNDIILCDGACDRGFHQFCLEPPLLSEDIPPDDEGWLCPGCDCKVDCF-DLLNDSQGTDLSVADSWEKV 611
BLAST of NO06G00850 vs. NCBI_GenBank
Match: XP_008373078.1 (PREDICTED: homeobox protein HAT3.1-like isoform X3 [Malus domestica]) HSP 1 Score: 68.9 bits (167), Expect = 1.000e-7 Identity = 48/169 (28.40%), Postives = 77/169 (45.56%), Query Frame = 0 Query: 643 RAKKHLKILSDNLFKLRTLTDRWAGTESVELDGRHVPLREMMSEAEAKVSVAKKGLRMVMDELQRLHEDAQLDDS------DWEEEDAVCAVCGDGDATDENDIAVCD-KCLVPFHQHCHVPMLTEEDLGEEDEEWWCRRCDLIYDWMSNCVLDAFGVDEERARTFRKV 805 R +KHL+ L + + ++L D ++G + + + A +++ K +R + L L + +S + ED CA CG D + +NDI +CD C FHQ C P L ED+ +DE W C CD D + + D+ G D A ++ KV Sbjct: 444 RVRKHLRYLLNRISYEKSLIDAYSGEGWKGSSLEKLKPEKELQRATSEILQRKLKIRDLFQRLDSLCSEGMFPESLFDSEGQIDSEDIFCAKCGSKDVSLQNDIILCDGACDRGFHQFCLEPPLLSEDIPPDDEGWLCPGCDCKVDCF-DLLNDSQGTDLSVADSWEKV 611
BLAST of NO06G00850 vs. NCBI_GenBank
Match: XP_021624836.1 (homeobox protein HAT3.1-like [Manihot esculenta] >OAY39199.1 hypothetical protein MANES_10G075000 [Manihot esculenta]) HSP 1 Score: 68.9 bits (167), Expect = 1.000e-7 Identity = 49/151 (32.45%), Postives = 75/151 (49.67%), Query Frame = 0 Query: 643 RAKKHLKILSDNLFKLRTL-----TDRWAGTESVELDGRHVPLREMMSEAEAKVSVAKKGLRMVMDELQRLHEDAQLDDSDWE------EEDAVCAVCGDGDATDENDIAVCD-KCLVPFHQHCHVPMLTEEDLGEEDEEWWCRRCDLIYD 782 R +K L+ L + +TL + W G +L P +E++ A ++VS K +R + + L + +L +S ++ ED CA CG D T +NDI +CD +C FHQ C VP L++ED+ +DE W C CD D Sbjct: 378 RIRKRLRYLLTRMSYEQTLITAYCAEGWKGLSLEKLK----PEKELI-RATSEVSRCKLKIRDLFQRIDSLCTEGKLPESLFDSEGQISSEDIFCANCGSKDVTSDNDIILCDGRCDRGFHQFCLVPPLSKEDIPPDDEGWLCPGCDCKVD 523
BLAST of NO06G00850 vs. NCBI_GenBank
Match: XP_021669772.1 (homeobox protein HAT3.1-like [Hevea brasiliensis]) HSP 1 Score: 66.6 bits (161), Expect = 5.000e-7 Identity = 46/148 (31.08%), Postives = 77/148 (52.03%), Query Frame = 0 Query: 643 RAKKHLKILSDNLFKLRTLTDRWA--GTESVELDGRHVPLREMMSEAEAKVSVAKKGLRMVMDELQRLHEDAQLDDSDWE------EEDAVCAVCGDGDATDENDIAVCD-KCLVPFHQHCHVPMLTEEDLGEEDEEWWCRRCDLIYD 782 + +KHL+ + + + ++L ++ G + + LD + P +E + A+A++ K +R + + L + +L +S ++ ED CA CG D T +NDI +CD C FHQ C VP L +ED+ +DE W C CD D Sbjct: 373 KIRKHLRYMLNRMSYEQSLITAYSAEGWKGLSLD-KLKPEKE-LQRAKAEIFRRKLNIRDLFQRIDSLCAEGKLPESLFDSEGQISSEDIFCAKCGAEDLTADNDIILCDGTCDRGFHQFCLVPPLLKEDIPPDDEGWLCPGCDCKVD 518
BLAST of NO06G00850 vs. NCBI_GenBank
Match: XP_006346339.1 (PREDICTED: pathogenesis-related homeodomain protein [Solanum tuberosum] >XP_006346341.1 PREDICTED: pathogenesis-related homeodomain protein [Solanum tuberosum] >XP_006346342.1 PREDICTED: pathogenesis-related homeodomain protein [Solanum tuberosum]) HSP 1 Score: 66.2 bits (160), Expect = 6.500e-7 Identity = 47/169 (27.81%), Postives = 77/169 (45.56%), Query Frame = 0 Query: 643 RAKKHLKILSDNLFKLRTLTDRWAGTESVELDGRHVPLREMMSEAEAKVSVAKKGLRMVMDELQRLHEDAQL------DDSDWEEEDAVCAVCGDGDATDENDIAVCD-KCLVPFHQHCHVPMLTEEDLGEEDEEWWCRRCDLIYDWMSNCVLDAFGVDEERARTFRKV 805 R + HL+ L + +TL + ++G + L + + A+ + K +R + L L + +L ++ + + ED CA CG D +NDI +CD C FHQ C P L +ED+ +DE W C CD D + + + D G D ++ KV Sbjct: 126 RIRGHLRYLLQRITYEQTLIEAYSGEGWKGQSLEKIKLEKELQRAKTHIFRYKLKIRDLFQRLDTLLAEGRLPASLFDNEGEIDSEDIFCAKCGSMDLPADNDIILCDGACERGFHQLCVEPPLLKEDIPPDDEGWLCPGCDCKVDCI-DLLNDLQGTDLSVTDSWEKV 293
BLAST of NO06G00850 vs. NCBI_GenBank
Match: XP_009346873.1 (PREDICTED: homeobox protein HAT3.1-like, partial [Pyrus x bretschneideri]) HSP 1 Score: 66.2 bits (160), Expect = 6.500e-7 Identity = 47/169 (27.81%), Postives = 77/169 (45.56%), Query Frame = 0 Query: 643 RAKKHLKILSDNLFKLRTLTDRWAGTESVELDGRHVPLREMMSEAEAKVSVAKKGLRMVMDELQRLHEDAQLDDS------DWEEEDAVCAVCGDGDATDENDIAVCD-KCLVPFHQHCHVPMLTEEDLGEEDEEWWCRRCDLIYDWMSNCVLDAFGVDEERARTFRKV 805 R +KHL+ L + + ++L D ++G + + + A +++ K +R + L L + +S + ED CA CG D + +NDI +CD C FHQ C P L ED+ +DE W C CD D + + ++ G D A ++ KV Sbjct: 78 RVRKHLRYLLNXISYEKSLIDAYSGEGWKGSSLEKLKPEKELQRATSEILRRKLKIRDLFQRLDSLCSEGMFPESLFDSEGQIDSEDIFCAKCGSKDVSLQNDIILCDGACDRGFHQLCLEPSLLSEDIPPDDEGWLCPGCDCKVDCF-DLLNESQGTDLSVADSWEKV 245 The following BLAST results are available for this feature:
BLAST of NO06G00850 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 13
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G00850 ID=NO06G00850|Name=NO06G00850|organism=Nannochloropsis oceanica|type=gene|length=3057bpback to top protein sequence of NO06G00850.1 >NO06G00850.1-protein ID=NO06G00850.1-protein|Name=NO06G00850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1019bpback to top Synonyms
Publications
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