NO06G00820, NO06G00820 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G00820 vs. NCBI_GenBank
Match: EWM26138.1 (pentatricopeptide repeat-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 919.8 bits (2376), Expect = 5.700e-264 Identity = 498/799 (62.33%), Postives = 590/799 (73.84%), Query Frame = 0 Query: 3 LLLLFSVLLPLVSTTTKA-----FIPTTPLPVRTRTIMALASXXXXXQYPQEAQDSADKARRFSXXXXXXXXXLSPPPTAQRARSWTSTPLIEWSLRRVGTTPAIDLLESALEERGQGSDLNGEDDGLFTAALKECRSIGDGKRALRYLGIMKHRHMREIDVVSTIHACAAEGLTDDAIGTFRRLAEMKREQGRVISFGSPSYVAIIMACSKGNRPDDALAFFQEMGVGGIPPPDAACYAAMMETYRRYGRATDALALLDNMKVRGMVEGHSRAAPRGLHLVLAATIRALTDLGRAGEALERFELALDGSSGIIPDGGCFAAALEAVADLGNWRRALGLIEEMGREVEYINSRGVFLRRQLRVGRQHYVAVLRACAKAGEAEQALEILQDMQTRGSIRPDEKCYRWALFACCKGGQWGRAFDMLMEEEQPPLSQIPWTLPCYTTTMRALVNVGEGPRVLTLWEKLLARGLAPDAATGDIALSMAGKEKNWEAAEAIFAVLTSRGMEPYVAGVGVVLEGLCQQGRLDEARELLRQVSVPNVIMYTSLLSAMGRVGDVTGALALLEEMETEAGITPDHVALTCLVDACLKAGKVEDAVRLAARLETTSAMVGGVKRGKGKGGGRPQEDEKSFGVRVLTLLEQGQWEAAWRSIQEAETAAGHVPVPAMSYSVLVNAAAKEGRWQDAVDMLLHMREKRGLEPSTVDLSSAINACRMGGEVGMALKLLEVLKIRRQEYATAKSQXXXXXXXXXXXXXXXXXXXXXXXXEQGLQQSVVEEEEAHDPNPYQVSYGLVLDLLAKQLS 797 LL L +V TTT A F+ T P P +I AL Y E+++ ++R PP + + +PL+EWSLRRVGTTPAIDLLE+ALEE + G+D+GL TAALKECRSIGDG+RALRYLG++ +REID VSTI+ACAAEGLTD+A+ FRRLA +R++G V ++G P YVAII+ACSKG RP+DA+AFF EMGV G P PDAACYAAMMETYRR GRA++ALALL+++K GM E R APRG HLVLAATIRALTDLGR EALERF+ A +SG+IPDGGC+ AALEA ADLG+WRRAL LIEEMGREVEY N RG F+RRQLRVGRQHYVA +RACAKAGE+EQAL +L+DM+TRG +RPDEKC+RWALFACC+ QW RA+ ML+E PP PWTLPCYTTTMRALV VG+ VL LW+ LL RGLAPDA TGDIALS+AGK+K WE +AIF L RG+EPY AG+GVV+EGLCQQG+L EA LRQVS PNVIM+TS+LS MGR G++ GALALLEEMET+AG+TPDHVALTCLVDACLKAG VE+A RLA+RLE +A+ G+ +G QEDE+SFGVRV T+LEQG WE AWR+I++AET GHVPVPAMSYSVL+NAAAKEGRW+DA++MLLHMREKRGLEPSTVDLSSAINACR+GGE ALKLLE+L +RR+ + ++ V E EE D +PYQV+YGLVLDLLA+Q S Sbjct: 4 LLSLLTVGALSRRTTTYAFRFIPFLATRPAPPHLCSISAL---RFSNPYRHESREKTGQSRMPHPSPTTLLPHAQQPP---HGKGKSPSPLVEWSLRRVGTTPAIDLLENALEEDRLTNLGVGDDEGLLTAALKECRSIGDGRRALRYLGMVNDYQLREIDCVSTIYACAAEGLTDEAVSVFRRLA--RRKRGPVRAWGPPCYVAIIVACSKGGRPEDAVAFFSEMGVNGEPAPDAACYAAMMETYRRSGRASEALALLEDLKACGMAEAPGRPAPRGSHLVLAATIRALTDLGRPAEALERFDQARGLASGVIPDGGCYGAALEAAADLGDWRRALHLIEEMGREVEYKNVRGTFVRRQLRVGRQHYVAAMRACAKAGESEQALALLRDMRTRGGVRPDEKCHRWALFACCQDAQWRRAYAMLLEGPAPPSCDAPWTLPCYTTTMRALVRVGQTEEVLALWDLLLVRGLAPDAGTGDIALSVAGKQKKWELVKAIFDELQGRGVEPYEAGIGVVIEGLCQQGQLKEALAFLRQVSAPNVIMFTSVLSGMGRAGELAGALALLEEMETKAGVTPDHVALTCLVDACLKAGDVENAGRLASRLE-ANALAQVDCPGQAEG---MQEDERSFGVRVRTMLEQGYWEDAWRTIKDAETVEGHVPVPAMSYSVLLNAAAKEGRWRDALEMLLHMREKRGLEPSTVDLSSAINACRVGGETRTALKLLELLDLRRRARGRLGKRAAEPCHRNGGKVLP--------------RREVAESEE--DLSPYQVTYGLVLDLLARQAS 774
BLAST of NO06G00820 vs. NCBI_GenBank
Match: XP_005856347.1 (pentatricopeptide repeat10, partial [Nannochloropsis gaditana CCMP526] >EKU20003.1 pentatricopeptide repeat10, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 628.2 bits (1619), Expect = 3.400e-176 Identity = 324/490 (66.12%), Postives = 379/490 (77.35%), Query Frame = 0 Query: 307 SSGIIPDGGCFAAALEAVADLGNWRRALGLIEEMGREVEYINSRGVFLRRQLRVGRQHYVAVLRACAKAGEAEQALEILQDMQTRGSIRPDEKCYRWALFACCKGGQWGRAFDMLMEEEQPPLSQIPWTLPCYTTTMRALVNVGEGPRVLTLWEKLLARGLAPDAATGDIALSMAGKEKNWEAAEAIFAVLTSRGMEPYVAGVGVVLEGLCQQGRLDEARELLRQVSVPNVIMYTSLLSAMGRVGDVTGALALLEEMETEAGITPDHVALTCLVDACLKAGKVEDAVRLAARLETTSAMVGGVKRGKGKGGGRPQEDEKSFGVRVLTLLEQGQWEAAWRSIQEAETAAGHVPVPAMSYSVLVNAAAKEGRWQDAVDMLLHMREKRGLEPSTVDLSSAINACRMGGEVGMALKLLEVLKIRRQEYATAKSQXXXXXXXXXXXXXXXXXXXXXXXXEQGLQQSVVEEEEAHDPNPYQVSYGLVLDLLAKQLS 797 +SG+IPDGGC+ AALEA ADLG+WRRAL LIEEMGREVEY N RG F+RRQLRVGRQHYVA +RACAKAGE+EQAL +L+DM+TRG +RPDEKC+RWALFACC+ QW RA+ ML+E PP PWTLPCYTTTMRALV G+ VL LW+ LL RGLAPDA TGDIALS+AGK+K WE +AIF L RG+EPY AG+GVV+EGLCQQG+L EA LRQVS PNVIM+TS+LS MGR G++ GALALLEEMET+AG+TPDHVALTCLVDACLKAG VE+A RLA+RLE +A+ G+ +G QEDE+SFGVRV T+LEQG WE AWR+I++AET GHVPVPAMSYSVL+NAAAKEGRW+DA++MLLHMREKRGLEPSTVDLSSAINACR+GGE ALKLLE+L +RR+ + ++ V E EE D +PYQV+YGLVLDLLA+Q S Sbjct: 57 ASGVIPDGGCYGAALEAAADLGDWRRALHLIEEMGREVEYKNVRGTFVRRQLRVGRQHYVAAMRACAKAGESEQALALLRDMRTRGGVRPDEKCHRWALFACCQDAQWRRAYAMLLEGPAPPSCDAPWTLPCYTTTMRALVRAGQTEEVLALWDLLLVRGLAPDAGTGDIALSVAGKQKKWELVKAIFDELQGRGVEPYEAGIGVVIEGLCQQGQLKEALAFLRQVSAPNVIMFTSVLSGMGRAGELAGALALLEEMETKAGVTPDHVALTCLVDACLKAGDVENAGRLASRLE-ANALAQVDCPGQAEG---MQEDERSFGVRVRTMLEQGYWEDAWRTIKDAETVEGHVPVPAMSYSVLLNAAAKEGRWRDALEMLLHMREKRGLEPSTVDLSSAINACRVGGETRTALKLLELLDLRRRARGRLGKRAAEPCHRNGGKVLP--------------RREVAENEE--DLSPYQVTYGLVLDLLARQAS 526
BLAST of NO06G00820 vs. NCBI_GenBank
Match: XP_005856350.1 (mitochondrial protein, partial [Nannochloropsis gaditana CCMP526] >EKU20006.1 mitochondrial protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 236.1 bits (601), Expect = 3.800e-58 Identity = 118/169 (69.82%), Postives = 142/169 (84.02%), Query Frame = 0 Query: 85 STPLIEWSLRRVGTTPAIDLLESALEERGQGSDLNGEDDGLFTAALKECRSIGDGKRALRYLGIMKHRHMREIDVVSTIHACAAEGLTDDAIGTFRRLAEMKREQGRVISFGSPSYVAIIMACSKGNRPDDALAFFQEMGVGGIPPPDAACYAAMMETYRRYGRATDAL 254 ++PL+EWSLRRVGTTPAIDLLE+ALEE + G+D+GL TAALKECRSIGDG+RALRYLG++ +REID VSTI+ACAAEGLTD+A+ FRRLA +R++G V ++G P YVAII+ACSKG RP+DA+AFF EMGV G P PDAACYAAMMETYRR GRA++AL Sbjct: 1 TSPLVEWSLRRVGTTPAIDLLENALEEDRLTNLGVGDDEGLLTAALKECRSIGDGRRALRYLGMVNDYQLREIDCVSTIYACAAEGLTDEAVSVFRRLA--RRKRGPVRAWGPPCYVAIIVACSKGGRPEDAVAFFSEMGVNGEPAPDAACYAAMMETYRRSGRASEAL 167
BLAST of NO06G00820 vs. NCBI_GenBank
Match: XP_011070072.1 (pentatricopeptide repeat-containing protein At5g27110 isoform X1 [Sesamum indicum] >XP_011070073.1 pentatricopeptide repeat-containing protein At5g27110 isoform X1 [Sesamum indicum]) HSP 1 Score: 80.1 bits (196), Expect = 3.500e-11 Identity = 100/438 (22.83%), Postives = 177/438 (40.41%), Query Frame = 0 Query: 175 AIGTFRRLAEMKREQGRVISFGSPSYVAI----IMACSKGNRPDDALAFFQEMGVGGIPPPDAACYAAMMETYRRYGRATDALALLDNMKVRGMVEGHSRAAPRGLHLVLA-ATIRALTDLGRA---GEALERFELALDG-SSGIIPD----GGCFAAALEAVADLGN-----WRRALGLIEEMGREVEYINSRGVFLRRQLRVGRQHYVAVLRACAKAGEAEQALEILQDMQTRGSIRPD---EKCYRWALFACCKGGQWGRAFDMLMEEEQPPLSQIPWTLPCYTTTMRALVNVGEGPRVLTLWEKLLARGLAPDAATGDIALSMAGKEKNWEAAEAIFAVLTSRGMEPYVAGVGVVLEGLCQQGRLDEARELLRQVSVPNVIMYTSLLSAMGRVGDVTGALALLEEMETEAGITPDHVALTCLVDACLKAGKVED 592 A G RR+ ++ ++ G S V I I +K A+ F EM P D AC+ ++ Y + G+ AL + M+ G+ P + A ++ L DL R E + R L +D S + D GC A E ++ N W +G ++G V I ++R ++L ACAK+ + + + L R ++R D E F C R F M+ P S + W + + V+ G L++++++ G++PDA T A++ + E + + + + +G +L+ + G +++A + Q+S +++ +TS++ A G G AL L +EM + I PD V ++ AC AG V++ Sbjct: 116 ACGGLRRVDYGEKIHNHLMKIGFLSDVVIASSLIGVYAKCGLFASAVKLFDEM-----PERDLACWNNVISCYYQSGQCQKALEYYERMRSNGL-------RPDSVSFTTAISSCARLLDLERGQRIHEEVLRSGLVMDAYVSATLVDMYGKCGCLERAKEVFDEIRNKSLVSWNAMIGGYSQVGDSVSCIELLVRMNEEKVRPSSTTISSLLVACAKSAQLQHG-KFLHGYIMRNNVRSDIFVESSLVDLYFKCGSVALAERVFHMM-----PKSSVVAWNV-----MISGYVSAGCYFEALSIYDEMREAGISPDAITFTSAVAACSQLAALERGKELHKCIIECRLNSNEVLMGALLDMYAKCGAVEQAASIFNQLSTRDLVSWTSMIVAYGSHGQAFEALKLFDEMLLK-HIRPDRVTFLAVISACSHAGLVDE 529
BLAST of NO06G00820 vs. NCBI_GenBank
Match: XP_020547661.1 (pentatricopeptide repeat-containing protein At5g27110 isoform X2 [Sesamum indicum]) HSP 1 Score: 80.1 bits (196), Expect = 3.500e-11 Identity = 100/438 (22.83%), Postives = 177/438 (40.41%), Query Frame = 0 Query: 175 AIGTFRRLAEMKREQGRVISFGSPSYVAI----IMACSKGNRPDDALAFFQEMGVGGIPPPDAACYAAMMETYRRYGRATDALALLDNMKVRGMVEGHSRAAPRGLHLVLA-ATIRALTDLGRA---GEALERFELALDG-SSGIIPD----GGCFAAALEAVADLGN-----WRRALGLIEEMGREVEYINSRGVFLRRQLRVGRQHYVAVLRACAKAGEAEQALEILQDMQTRGSIRPD---EKCYRWALFACCKGGQWGRAFDMLMEEEQPPLSQIPWTLPCYTTTMRALVNVGEGPRVLTLWEKLLARGLAPDAATGDIALSMAGKEKNWEAAEAIFAVLTSRGMEPYVAGVGVVLEGLCQQGRLDEARELLRQVSVPNVIMYTSLLSAMGRVGDVTGALALLEEMETEAGITPDHVALTCLVDACLKAGKVED 592 A G RR+ ++ ++ G S V I I +K A+ F EM P D AC+ ++ Y + G+ AL + M+ G+ P + A ++ L DL R E + R L +D S + D GC A E ++ N W +G ++G V I ++R ++L ACAK+ + + + L R ++R D E F C R F M+ P S + W + + V+ G L++++++ G++PDA T A++ + E + + + + +G +L+ + G +++A + Q+S +++ +TS++ A G G AL L +EM + I PD V ++ AC AG V++ Sbjct: 39 ACGGLRRVDYGEKIHNHLMKIGFLSDVVIASSLIGVYAKCGLFASAVKLFDEM-----PERDLACWNNVISCYYQSGQCQKALEYYERMRSNGL-------RPDSVSFTTAISSCARLLDLERGQRIHEEVLRSGLVMDAYVSATLVDMYGKCGCLERAKEVFDEIRNKSLVSWNAMIGGYSQVGDSVSCIELLVRMNEEKVRPSSTTISSLLVACAKSAQLQHG-KFLHGYIMRNNVRSDIFVESSLVDLYFKCGSVALAERVFHMM-----PKSSVVAWNV-----MISGYVSAGCYFEALSIYDEMREAGISPDAITFTSAVAACSQLAALERGKELHKCIIECRLNSNEVLMGALLDMYAKCGAVEQAASIFNQLSTRDLVSWTSMIVAYGSHGQAFEALKLFDEMLLK-HIRPDRVTFLAVISACSHAGLVDE 452
BLAST of NO06G00820 vs. NCBI_GenBank
Match: OMO62011.1 (Cytochrome P450 [Corchorus olitorius]) HSP 1 Score: 79.7 bits (195), Expect = 4.500e-11 Identity = 98/413 (23.73%), Postives = 164/413 (39.71%), Query Frame = 0 Query: 214 DDALAFFQEMGVGGIPPPDAACYAAMMETYRRYGRATDALALLDNMKVRGMVEGHSRAAPRGLHLVLA-ATIRALTDLGRAGEALERFELALDGSSGIIPDGGCFAAALEAVADLGNWRRALGLIEEMGREV-EYINSRGVFLRRQLRVGRQHYVAVLRACAKAGEAEQALEILQDMQTRGSIRPDEKCYRWALFACCKGG--QWGR--------------------AFDMLME-----------EEQPPLSQIPWTLPCYTTTMRALVNVGEGPRVLTLWEKLLARGLAPDAATGDIALSMAGKEKNWEAAEAIFAVLTSRGMEPYVAGVGVVLEGLCQQGRLDEARELLRQVSVPNVIMYTSLLSAMGRVGDVTGALALLEEMETEAGITPDHVALTCLVDACLKAGKVED 592 D A F EM P D AC+ ++ Y + GRA AL LL M+ G P + L +A ++ L DL R E EL D GI+ DG +A ++ G EM +EV E I +GV + +++ + G++ +E+ + M G I+P L AC + Q+G+ D+ + E P + W + + V+VG+ L +E ++ GL PDA T L+ + E + I +T +E +G +L+ + G +DEA + + +++ +TS+++A G G AL+L EM+ ++ PD V ++ AC G V++ Sbjct: 158 DQATRMFDEM-----PERDVACWNTVISCYYQDGRAEKALELLGKMRDAGF-------EPNSVTLTVAISSCARLMDLERGKEI--HGELVKD---GIVLDGFFGSALVDMYGKCG--------CLEMAKEVFEQIPEKGVVT----------WNSMISGYSSVGDSRSCIELFRRMNAEG-IKPSLTTLSSILMACSRSAQLQYGKFIHGYIIRNMIGADIFVNNCLIDLYFKCGNFHSAESIFEMMPKTDVVSWNV-----MISGFVSVGKYFDALITYEDMIKAGLNPDAVTFSSVLAACSQLAALEKGKEIHNSITQSSLERNEVVMGALLDMYAKCGAVDEAFRIFCNLPERDLVSWTSMITAYGSHGRALEALSLFGEMQ-KSSSKPDAVTFLAVLSACSHGGLVDE 528
BLAST of NO06G00820 vs. NCBI_GenBank
Match: CBN76224.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 78.6 bits (192), Expect = 1.000e-10 Identity = 120/517 (23.21%), Postives = 191/517 (36.94%), Query Frame = 0 Query: 224 GVGG---IPPPDAACYAAMMETYRRYGRATDALALLDNMKVRGM---------------VEGHSRAAPRGLHLVLAATIRALTDLGRAGEALERFELALDGSSGIIPDGGCFAAALEAVADLGNWRRALGLIEEMGREVEYINSRGV-------------FLRRQLRVGRQH-------------YVAVLRACAKAGEAEQALEILQDMQTRGSIRPDEKCYRWALFACCKGGQWGRAFDMLMEEEQPPLSQIPWTLPCYTTTMRALVNVGEGPRVLTLWEKLLARGLAPDAATGDIALSMAGKEKNWEAAEAIFAVLTSRGMEPYVAGVGVVLEGLCQQ------GRLDEARELLRQVSVPNVIMYTSLLSAMGRVGDVTG------ALALLEEMETEAGITPDHVALTCLVDACLKAGKVEDAVRLAARLETTSAMVGGVKRGKGKGGGRPQEDEKSFGVRVLTLLEQGQWEAAWRSIQEAETAAGHVPVPAMSYSVLVNAAAKEGRWQDAVDML 685 G GG P DA + + ME GR + ALL M G+ G + A L + A +A T +G +GE + ++G+ PD GC+AA + + + G W++AL L+ + R+ + G L + R G Y A L ACA+A E AL++L++M+ RG D + + A+ AC GQW +A +L ++ T A G G R+ T + PDA + A++ G + A + + S G EP V V+ + + G E + + + G G+ G A LL EM EAG+TP+ ++ C +A E A LE + M G + + G R D + G V T +E+ P +S++ + A K G+W+ A+ +L Sbjct: 340 GTGGGAAWPAADAVSFNSAMEACAIAGRWQEGTALLPRMLEVGVRPDVCSYGGHLACLRAGGQWQRAVEVLDEMTKAAAKAGTGIGGSGE---------EEAAGVSPDLGCYAAVISTLGEAGRWKQALDLLRFLQRKGSSAATWGEEPAARXXXXXXWDALAAEARGGGAAISSSPAAGPNLVCYNAALTACARAKEGSTALDLLEEMEGRGVF--DTESFNCAMLACRGKGQWHKATAILNRMVSGDAVRL-GEGSGGTAGGAAAGEGGWGARLRTTVPR-------PDAYSFASAITACGDVGRADVALELLRKMKSAGAEPNVVVFNAVIRAVSRGITGPAFGATPERAGVTAAWEEGSAAGDGYAAAGRGEGGEKAGRDSWRRAYFLLVEMR-EAGLTPEVKTYNTVLAVCQRAEAWEGA------LEVLAEMKSGTAKRPARSGPR-DRDASAHGAAVSTWIEEPA-----------------PPPDLVSFNTAMGACGKAGQWEKALSLL 812
BLAST of NO06G00820 vs. NCBI_GenBank
Match: XP_015876554.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like [Ziziphus jujuba]) HSP 1 Score: 78.2 bits (191), Expect = 1.300e-10 Identity = 89/406 (21.92%), Postives = 150/406 (36.95%), Query Frame = 0 Query: 231 PDAACYAAMMETYRRYGRATDALALLDNMKVRGMVEGHSRAAPRGLHLVLAATIRALTDLGRAGEALERFELALDGSSGIIPDGGCFAAALEAVADLGNWR-------RALGLIEEMGREVE-----------YINSRGVFLRRQLRVGRQHYVAVLRACAKAGEAEQALEILQDMQTRGSIRPDEKCYRWALFAC-----------------------------------CKGGQWGRAFDMLMEEEQPPLSQIPWTLPCYTTTMRALVNVGEGPRVLTLWEKLLARGLAPDAATGDIALSMAGKEKNWEAAEAIFAVLTSRGMEPYVAGVGVVLEGLCQQGRLDEARELLRQVSVPNVIMYTSLLSAMGRVGDVTGALALLEEMETEAGITPDHVALTCLVDAC 584 PD ++ Y ++ R DA L + M R V A I + +G A EALE F L + + G P+ + A+ A A GN R R + +E+G V +NS G+ L + ++L GE E+AL+I + + +E L AC K G+ A +E +QP LP +T + V G+G + L+ +L GL P+ T L EK+ + + +++ G ++ V +L+ + G L++ E+ +Q+ NVI + SL+S G A+ LL++M + G P+ + ++ C Sbjct: 33 PDVYTNNHLLSMYTKFKRMVDARNLFEIMPERNFVS-------------WTALISGYSQMGMAEEALECFRLMV--NDGFSPNDYTYVGAISACARTGNARYGKAIHGRIYRMEKELGSLVNNSLVNMYGKCGLLNSAGLVFDANLEPDSVSWTSLLSCYCHCGETEEALKIFL-RSLKAGVAVNEFSCATVLSACAALENLLVGMQTHPLIIKCGLALDKFVRTGLVDLYAKCGELELAHQAFLEVDQP-------ELPIWTALLGGFVQQGKGRDAIDLFHRLYYSGLKPNERTFSSVLGAFADEKDIAVGKRLHSLIIKMGFSSFIFVVNAILDFYSKCGLLEDTLEIFKQMDEHNVISWNSLISGFVSSGQYGEAIDLLKDMLCK-GFDPNLFTYSIILSIC 414
BLAST of NO06G00820 vs. NCBI_GenBank
Match: XP_021653412.1 (pentatricopeptide repeat-containing protein At5g27110-like [Hevea brasiliensis]) HSP 1 Score: 78.2 bits (191), Expect = 1.300e-10 Identity = 94/396 (23.74%), Postives = 161/396 (40.66%), Query Frame = 0 Query: 216 ALAFFQEMGVGGIPPPDAACYAAMMETYRRYGRATDALALLDNMKVRGMVEGHSRAAPRGLHLVLAATIRALTDLGRAGEALERFELALDGSSGIIPDGGCFAAALEAVADLGNWRRALGLIEEMGRE--------VEYINSRG-------VFLRRQLRVGRQHYV---AVLRACAKAGEAEQALEILQDMQTRGSIRPDEKCYRWAL---FACCKGGQWGRAFDMLMEEEQPPLSQIPWTLPCYTTTMRALVNVGEGPRVLTLWEKLLARGLAPDAATGDIALSMAGKEKNWEAAEAIFAVLTSRGMEPYVAGVGVVLEGLCQQGRLDEARELLRQVSVPNVIMYTSLLSAMGRVGDVTGALALLEEMETEAGITPDHVALTCLVDACLKAGKVE 591 A+ F EM P D A + ++ Y +YG A AL L D M+ G L V+++ R L DL R G+ + R + SG + DG +A ++ G A + E+M ++ + +S G +F R + + ++L AC++A + L R SI D + F C + F+ML + C+ + V VG L +++ + G+ PDA T LS + E + I ++ RG+E +G +L+ + G +DEA + ++ +++ +TS+++A G G AL L EM+ ++ PD V ++ AC AG V+ Sbjct: 160 AIQLFDEM-----PERDVASWNTVISCYYQYGDAKKALELFDKMRESGFEPNLVT-----LTTVISSCAR-LLDLER-GKEIHREMM----KSGKVLDGFVSSALVDLYGKCGCLDIAKDIFEQMPKKTLVAWNSMISGYSSVGDSRECIELFKRMNIEGTKPTLTTLSSILMACSRAAQLRHG-RFLHGYVIRNSIEADIFVNSGLIDLYFKCGRVQSAENVFEMLPRA----------NVVCWNVMISGYVTVGNYFEALNMYDDMKVAGVKPDAVTFSSVLSACSQLAALEKGKEIHNCISERGLESNEIVMGALLDMYAKCGAVDEAYNVFNKLPERDLVSWTSMITAYGSHGQALEALRLFGEMQ-QSNAKPDAVTFLEVLSACSHAGLVD 527
BLAST of NO06G00820 vs. NCBI_GenBank
Match: XP_021653376.1 (pentatricopeptide repeat-containing protein At5g27110-like [Hevea brasiliensis]) HSP 1 Score: 78.2 bits (191), Expect = 1.300e-10 Identity = 94/396 (23.74%), Postives = 161/396 (40.66%), Query Frame = 0 Query: 216 ALAFFQEMGVGGIPPPDAACYAAMMETYRRYGRATDALALLDNMKVRGMVEGHSRAAPRGLHLVLAATIRALTDLGRAGEALERFELALDGSSGIIPDGGCFAAALEAVADLGNWRRALGLIEEMGRE--------VEYINSRG-------VFLRRQLRVGRQHYV---AVLRACAKAGEAEQALEILQDMQTRGSIRPDEKCYRWAL---FACCKGGQWGRAFDMLMEEEQPPLSQIPWTLPCYTTTMRALVNVGEGPRVLTLWEKLLARGLAPDAATGDIALSMAGKEKNWEAAEAIFAVLTSRGMEPYVAGVGVVLEGLCQQGRLDEARELLRQVSVPNVIMYTSLLSAMGRVGDVTGALALLEEMETEAGITPDHVALTCLVDACLKAGKVE 591 A+ F EM P D A + ++ Y +YG A AL L D M+ G L V+++ R L DL R G+ + R + SG + DG +A ++ G A + E+M ++ + +S G +F R + + ++L AC++A + L R SI D + F C + F+ML + C+ + V VG L +++ + G+ PDA T LS + E + I ++ RG+E +G +L+ + G +DEA + ++ +++ +TS+++A G G AL L EM+ ++ PD V ++ AC AG V+ Sbjct: 160 AIQLFDEM-----PERDVASWNTVISCYYQYGDAKKALELFDKMRESGFEPNLVT-----LTTVISSCAR-LLDLER-GKEIHREMM----KSGKVLDGFVSSALVDLYGKCGCLDIAKDIFEQMPKKTLVAWNSMISGYSSVGDSRECIELFKRMNIEGTKPTLTTLSSILMACSRAAQLRHG-RFLHGYVIRNSIEADIFVNSGLIDLYFKCGRVQSAENVFEMLPRA----------NVVCWNVMISGYVTVGNYFEALNMYDDMKVAGVKPDAVTFSSVLSACSQLAALEKGKEIHNCISERGLESNEIVMGALLDMYAKCGAVDEAYNVFNKLPERDLVSWTSMITAYGSHGQALEALRLFGEMQ-QSNAKPDAVTFLEVLSACSHAGLVD 527 The following BLAST results are available for this feature:
BLAST of NO06G00820 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G00820 ID=NO06G00820|Name=NO06G00820|organism=Nannochloropsis oceanica|type=gene|length=2633bpback to top protein sequence of NO06G00820.1 >NO06G00820.1-protein ID=NO06G00820.1-protein|Name=NO06G00820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=810bpback to top Synonyms
Publications
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