NO06G00810, NO06G00810 (gene) Nannochloropsis oceanica

Overview
NameNO06G00810
Unique NameNO06G00810
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1296
Alignment locationchr6:278443..279738 +

Link to JBrowse

Properties
Property NameValue
DescriptionProteasome subunit alpha type
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:278443..279738 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0000502proteasome complex
GO:0005839proteasome core complex
GO:0019773proteasome core complex, alpha-subunit complex
GO:0005737cytoplasm
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0004298threonine-type endopeptidase activity
GO:0004175endopeptidase activity
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0051603proteolysis involved in cellular protein catabolic process
GO:0006511ubiquitin-dependent protein catabolic process
GO:0019538protein metabolic process
GO:0009987cellular process
GO:0009056catabolic process
Vocabulary: INTERPRO
TermDefinition
IPR029055Ntn_hydrolases_N
IPR023332Proteasome_suA-type
IPR037560Proteasome_alpha_7-like
IPR001353Proteasome_sua/b
IPR000426Proteasome_asu_N
Homology
[Close]
BLAST of NO06G00810 vs. NCBI_GenBank
Match: EWM26153.1 (proteasome subunit alpha type 7 [Nannochloropsis gaditana])

HSP 1 Score: 451.1 bits (1159), Expect = 2.400e-123
Identity = 231/253 (91.30%), Postives = 241/253 (95.26%), Query Frame = 0 
Query:    1 MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKNAVILGVERRATAKLQDPRTIKKICKIDEHITLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYIARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGTAVLYQTDPAGTYSAWKATAVGGKNSSNMQEYLEKQWEDALGEEEAIRLTVKTLLEVVDSGAKNMEVAIIKNGEPMHMLDEATLAALAASIEAEQEEAKNKAVAGVSETKD 254
            MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGK++VILGVERRATAKLQDPRTIKKICKIDEH+TLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEY+ARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDG+AVLYQTDPAGTYSAWKATAVGG+NSSNMQEYLEKQW D L EE AIRLTVKTLLEVVDSGAKNMEVA+I  G PM MLDEATLAAL+ASIEAEQEEAK KA AG  E+K+
Sbjct:    1 MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKSSVILGVERRATAKLQDPRTIKKICKIDEHVTLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYVARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGSAVLYQTDPAGTYSAWKATAVGGRNSSNMQEYLEKQWADDLEEENAIRLTVKTLLEVVDSGAKNMEVAVITQGRPMRMLDEATLAALSASIEAEQEEAKKKASAGSGESKE 253
[Close]
BLAST of NO06G00810 vs. NCBI_GenBank
Match: CBJ25528.1 (proteasome subunit alpha type 7 [Ectocarpus siliculosus])

HSP 1 Score: 357.5 bits (916), Expect = 3.500e-95
Identity = 180/251 (71.71%), Postives = 212/251 (84.46%), Query Frame = 0 
Query:    1 MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKNAVILGVERRATAKLQDPRTIKKICKIDEHITLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYIARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGTAVLYQTDPAGTYSAWKATAVGGKNSSNMQEYLEKQWEDALGEEEAIRLTVKTLLEVVDSGAKNMEVAIIKNGEPMHMLDEATLAALAASIEAEQEEAKNKAVAGVSET 252
            MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSS V V+GK+ V+LGVERRATAKLQDPRTI+KI KID HITLAFAGLTADARVLV+KARLECQSYRLT EDAP++EY+AR+IARTQQ+YTQRGG+RPFGVS ++AG + DGT  +YQTDPAGTYSAWKA A+GG NS+NM+E+LEK W + + E  A +L +K LLEVVDSGAKNME+AI++ G+   M+ E  + A+AA +EAE EEAK  +   V  T
Sbjct:    1 MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSSVVCVKGKDCVVLGVERRATAKLQDPRTIRKIVKIDSHITLAFAGLTADARVLVDKARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGTPQIYQTDPAGTYSAWKANAIGGSNSNNMREFLEKNWANDMDEGAAKKLCMKALLEVVDSGAKNMEIAIVRFGKANEMMTEEMMQAVAAELEAEAEEAKEASAGDVQMT 251
[Close]
BLAST of NO06G00810 vs. NCBI_GenBank
Match: XP_024573306.1 (proteasome subunit alpha type 7 [Plasmopara halstedii] >CEG36937.1 proteasome subunit alpha type 7 [Plasmopara halstedii])

HSP 1 Score: 328.2 bits (840), Expect = 2.300e-86
Identity = 162/239 (67.78%), Postives = 202/239 (84.52%), Query Frame = 0 
Query:    3 SRYDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKNAVILGVERRATAKLQDPRTIKKICKIDEHITLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYIARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGTAVLYQTDPAGTYSAWKATAVGGKNSSNMQEYLEKQWEDALGEEEAIRLTVKTLLEVVDSGAKNMEVAIIKNGEPMHMLDEATLAALAASIEAEQEEAK 242
            SRYDRAITVFSPDGHLFQVEYA+EAVK+G+ AVGVRG+NAV+L VER+ TAKLQDPRT++KICK+D+HI++AFAGLTADARVLVNKARLECQSYRLT EDAP+VEY+ARY+AR QQKYTQRGGVRPFG+S +IAG +  G   LYQTDP+GT+SAWKA A  G+NSSN++E+LEK + +   EEEAI L +K LLEVV+SG+KN+E+ +++ G  +  L++  + AL   IE E+E A+
Sbjct:    2 SRYDRAITVFSPDGHLFQVEYAMEAVKKGAVAVGVRGQNAVVLAVERKETAKLQDPRTVRKICKVDDHISIAFAGLTADARVLVNKARLECQSYRLTVEDAPSVEYVARYVARVQQKYTQRGGVRPFGISMLIAGCDSQGIPQLYQTDPSGTFSAWKANAT-GRNSSNIREFLEKHYVENATEEEAITLAIKALLEVVESGSKNIEIVVVRVGGKVSPLEDEKVNALCDKIEEEKEAAR 239
[Close]
BLAST of NO06G00810 vs. NCBI_GenBank
Match: XP_008609259.1 (20S proteasome subunit alpha 4 [Saprolegnia diclina VS20] >EQC37097.1 20S proteasome subunit alpha 4 [Saprolegnia diclina VS20])

HSP 1 Score: 327.4 bits (838), Expect = 3.900e-86
Identity = 159/241 (65.98%), Postives = 203/241 (84.23%), Query Frame = 0 
Query:    1 MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKNAVILGVERRATAKLQDPRTIKKICKIDEHITLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYIARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGTAVLYQTDPAGTYSAWKATAVGGKNSSNMQEYLEKQWEDALGEEEAIRLTVKTLLEVVDSGAKNMEVAIIKNGEPMHMLDEATLAALAASIEAEQEEAK 242
            MASRYDRAITVFSPDGHLFQVEYA+EAVK+G+  VGVRG + V+L VER+ TAKLQDPRT++KICK+D+HITLAFAGLTADARVL+NKARLECQSYRLT EDAP+VEY+ARYIA+ QQ+YTQRGGVRPFG+S +IAG +  G   LYQTDP+GT++AWKA A  G+N  + +E+LEK +   + EE AIRL +K LLEVV++G+KN+EVA+++ G  +  +++AT+  + ASIE E+E+A+
Sbjct:    1 MASRYDRAITVFSPDGHLFQVEYAMEAVKKGAIVVGVRGADVVVLAVERKETAKLQDPRTVRKICKVDDHITLAFAGLTADARVLINKARLECQSYRLTVEDAPSVEYVARYIAKVQQRYTQRGGVRPFGISMLIAGCDTKGVPQLYQTDPSGTFTAWKANAT-GRNEKSTREFLEKNYAQDMNEEGAIRLAIKALLEVVEAGSKNIEVAVVRQGGVVSTVEDATVEIVCASIEKEKEDAR 240
[Close]
BLAST of NO06G00810 vs. NCBI_GenBank
Match: XP_009529394.1 (hypothetical protein PHYSODRAFT_354799 [Phytophthora sojae] >EGZ15645.1 hypothetical protein PHYSODRAFT_354799 [Phytophthora sojae])

HSP 1 Score: 327.0 bits (837), Expect = 5.100e-86
Identity = 161/239 (67.36%), Postives = 200/239 (83.68%), Query Frame = 0 
Query:    3 SRYDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKNAVILGVERRATAKLQDPRTIKKICKIDEHITLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYIARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGTAVLYQTDPAGTYSAWKATAVGGKNSSNMQEYLEKQWEDALGEEEAIRLTVKTLLEVVDSGAKNMEVAIIKNGEPMHMLDEATLAALAASIEAEQEEAK 242
            SRYDRAITVFSPDGHLFQVEYA+EAVK+G+  VGVRGKNAV+L VER+ TAKLQDPRT++KICK+D+HI++AFAGLTADARVLVNKARLECQSYRLT EDAP+VEY+ARYIAR QQKYTQRGGVRPFG+S +IAG +  G   LYQTDP+GT+SAWKA A  G+NS+N++E+LEK + +   EEEA+ L +K LLEVV+SG+KN+E+ +++ G  +  L +  +  L   IEAE+E A+
Sbjct:    2 SRYDRAITVFSPDGHLFQVEYAMEAVKKGAVVVGVRGKNAVVLAVERKETAKLQDPRTVRKICKVDDHISIAFAGLTADARVLVNKARLECQSYRLTVEDAPSVEYVARYIARVQQKYTQRGGVRPFGISMLIAGCDDQGVPQLYQTDPSGTFSAWKANAT-GRNSTNIREFLEKNYVENATEEEAVSLAIKALLEVVESGSKNIEIVVVRTGGKVSPLADEKVNELCDQIEAEKEAAR 239
[Close]
BLAST of NO06G00810 vs. NCBI_GenBank
Match: XP_002286262.1 (proteasome subunit alpha type 7-1 [Thalassiosira pseudonana CCMP1335] >EED95903.1 proteasome subunit alpha type 7-1 [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 326.6 bits (836), Expect = 6.700e-86
Identity = 160/246 (65.04%), Postives = 200/246 (81.30%), Query Frame = 0 
Query:    5 YDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKNAVILGVERRATAKLQDPRTIKKICKIDEHITLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYIARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGTAVLYQTDPAGTYSAWKATAVGGKNSSNMQEYLEKQWEDALGEEEAIRLTVKTLLEVVDSGAKNMEVAIIKNGEPMHMLDEATLAALAASIEAEQEEAKNKAVAGVSE 251
            YDRAITVFSPDGHLFQVEYA+EAV+RGS+AVGVRGK+ V+L VERRA AKLQDPRTI+KI  +DE   LAFAGLTADARVL+NK R E QSYRLT EDAP+VEY+ARYIARTQQKYTQRGGVRPFG++ ++AG + +G+ VLYQTDPAGT+S WKA  +GG+N+ +++E+LEK WE+ L E++A+R++V+ LLEVVDSGAKNME+ +++ G    +L+E  +  +  SIEAE EE K        E
Sbjct:    3 YDRAITVFSPDGHLFQVEYAMEAVRRGSTAVGVRGKDCVVLAVERRALAKLQDPRTIRKIVSVDERSVLAFAGLTADARVLINKTRTEAQSYRLTCEDAPSVEYLARYIARTQQKYTQRGGVRPFGIATLLAGFSEEGSPVLYQTDPAGTHSEWKAQVIGGRNAKSLREFLEKNWEEGLEEDKAVRMSVQALLEVVDSGAKNMEICVVRVGGKKTILEEKDVDEIVKSIEAEAEEGKTSGGGAADE 248
[Close]
BLAST of NO06G00810 vs. NCBI_GenBank
Match: XP_012197478.1 (hypothetical protein SPRG_03500 [Saprolegnia parasitica CBS 223.65] >KDO31571.1 hypothetical protein SPRG_03500 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 326.6 bits (836), Expect = 6.700e-86
Identity = 158/241 (65.56%), Postives = 203/241 (84.23%), Query Frame = 0 
Query:    1 MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKNAVILGVERRATAKLQDPRTIKKICKIDEHITLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYIARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGTAVLYQTDPAGTYSAWKATAVGGKNSSNMQEYLEKQWEDALGEEEAIRLTVKTLLEVVDSGAKNMEVAIIKNGEPMHMLDEATLAALAASIEAEQEEAK 242
            MASRYDRAITVFSPDGHLFQVEYA+EAVK+G+  VGVRG + V+L VER+ TAKLQDPRT++KICK+D+HITLAFAGLTADARVL+NKARLECQSYRLT EDAP+VEY+ARY+A+ QQ+YTQRGGVRPFG+S +IAG +  G   LYQTDP+GT++AWKA A  G+N  + +E+LEK +   + EE AIRL +K LLEVV++G+KN+EVA+++ G  +  +++AT+  + ASIE E+E+A+
Sbjct:    1 MASRYDRAITVFSPDGHLFQVEYAMEAVKKGAIVVGVRGADVVVLAVERKETAKLQDPRTVRKICKVDDHITLAFAGLTADARVLINKARLECQSYRLTVEDAPSVEYVARYVAKVQQRYTQRGGVRPFGISMLIAGCDTKGVPQLYQTDPSGTFTAWKANAT-GRNEKSTREFLEKNYVQDMNEEGAIRLAIKALLEVVEAGSKNIEVAVVRRGGIVSTVEDATVEVVCASIEKEKEDAR 240
[Close]
BLAST of NO06G00810 vs. NCBI_GenBank
Match: OQR92356.1 (proteasome subunit alpha type-7, threonine protease family T01A [Achlya hypogyna])

HSP 1 Score: 326.6 bits (836), Expect = 6.700e-86
Identity = 158/238 (66.39%), Postives = 201/238 (84.45%), Query Frame = 0 
Query:    4 RYDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKNAVILGVERRATAKLQDPRTIKKICKIDEHITLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYIARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGTAVLYQTDPAGTYSAWKATAVGGKNSSNMQEYLEKQWEDALGEEEAIRLTVKTLLEVVDSGAKNMEVAIIKNGEPMHMLDEATLAALAASIEAEQEEAK 242
            RYDRAITVFSPDGHLFQVEYA+EAVK+G+  VGVRG + V+L VER+ TAKLQDPRT++KICK+D+HITLAFAGLTADARVL+NKARLECQSYRLT EDAP+VEY+ARYIA+ QQ+YTQRGGVRPFG+S +IAG N  G   LYQTDP+GT++AWKA A  G+N  + +E+LEK +E  + EE AIRL +K LLEVV++G+KN+EVA+++ G  +  +++AT+  + ASIE E+E+A+
Sbjct:    9 RYDRAITVFSPDGHLFQVEYAMEAVKKGAIVVGVRGADVVVLAVERKETAKLQDPRTVRKICKVDDHITLAFAGLTADARVLINKARLECQSYRLTVEDAPSVEYVARYIAKIQQRYTQRGGVRPFGISMLIAGCNNQGVPQLYQTDPSGTFTAWKANAT-GRNEKSTREFLEKNYEQDMNEEAAIRLAIKALLEVVEAGSKNIEVAVVRRGGVVSTVEDATVEVVCASIEKEKEDAR 245
[Close]
BLAST of NO06G00810 vs. NCBI_GenBank
Match: XP_008875534.1 (hypothetical protein H310_10839 [Aphanomyces invadans] >ETV95783.1 hypothetical protein H310_10839 [Aphanomyces invadans])

HSP 1 Score: 326.2 bits (835), Expect = 8.700e-86
Identity = 162/246 (65.85%), Postives = 204/246 (82.93%), Query Frame = 0 
Query:    1 MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKNAVILGVERRATAKLQDPRTIKKICKIDEHITLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYIARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGTAVLYQTDPAGTYSAWKATAVGGKNSSNMQEYLEKQWEDALGEEEAIRLTVKTLLEVVDSGAKNMEVAIIKNGEPMHMLDEATLAALAASIEAEQEEAKNKAVA 247
            MASRYDRAITVFSPDGHLFQVEYA+EAVKRG+  VGVRG + V+L VER+ TAKLQDPRT++KICK+D+HITLAFAGLTADARVLVNKARLECQSYRLT EDAP+VEY+ARY+A+ QQ+YTQRGGVRPFG+S +IAG +  G   LYQTDP+GT++AWKA A  G+N  + +E+LEK +   + EE A+RL VK LLEVV++G+KN+EVA+++ G     + +AT+ ++ ASIE E+E+A+  A A
Sbjct:    1 MASRYDRAITVFSPDGHLFQVEYAMEAVKRGAVVVGVRGADVVVLAVERKETAKLQDPRTVRKICKVDDHITLAFAGLTADARVLVNKARLECQSYRLTVEDAPSVEYVARYVAKVQQRYTQRGGVRPFGISMLIAGCDTKGVPQLYQTDPSGTFTAWKANAT-GRNEKSTREFLEKNYVQDMDEEGAVRLAVKALLEVVEAGSKNIEVAVVRRGGVSSTVPDATVESVCASIEKEKEDARVGAEA 245
[Close]
BLAST of NO06G00810 vs. NCBI_GenBank
Match: OQS04766.1 (proteasome subunit alpha type-7, threonine protease family T01A [Thraustotheca clavata])

HSP 1 Score: 325.1 bits (832), Expect = 1.900e-85
Identity = 157/241 (65.15%), Postives = 204/241 (84.65%), Query Frame = 0 
Query:    1 MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKNAVILGVERRATAKLQDPRTIKKICKIDEHITLAFAGLTADARVLVNKARLECQSYRLTYEDAPTVEYIARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGTAVLYQTDPAGTYSAWKATAVGGKNSSNMQEYLEKQWEDALGEEEAIRLTVKTLLEVVDSGAKNMEVAIIKNGEPMHMLDEATLAALAASIEAEQEEAK 242
            MASRYDRAITVFSPDGHLFQVEYA+EAVK+G+  VGVRG ++V+L VER+ TAKLQDPRT++KICK+D+HITLAFAGL ADARVL+NKARLECQSYRLT EDAP+VEY+ARYIA+ QQ+YTQRGGVRPFG+S +IAG +  G   LYQTDP+GT++AWKA A  G+N  + +E+LEK +   + E++AIRL++K LLEVV++G+KN+EVA+++ G  +  + +AT+  + ASIE E+E+A+
Sbjct:    1 MASRYDRAITVFSPDGHLFQVEYAMEAVKKGAIVVGVRGTDSVVLAVERKETAKLQDPRTVRKICKVDDHITLAFAGLNADARVLINKARLECQSYRLTVEDAPSVEYVARYIAKVQQRYTQRGGVRPFGISMLIAGCDAQGVPQLYQTDPSGTFTAWKANAT-GRNEKSTREFLEKNYVQDMNEDDAIRLSIKALLEVVEAGSKNIEVAVVRRGGVVTTVPDATVEIVCASIEKEKEDAR 240
The following BLAST results are available for this feature:
BLAST of NO06G00810 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26153.12.400e-12391.30proteasome subunit alpha type 7 [Nannochloropsis g... [more]
CBJ25528.13.500e-9571.71proteasome subunit alpha type 7 [Ectocarpus silicu... [more]
XP_024573306.12.300e-8667.78proteasome subunit alpha type 7 [Plasmopara halste... [more]
XP_008609259.13.900e-8665.9820S proteasome subunit alpha 4 [Saprolegnia diclin... [more]
XP_009529394.15.100e-8667.36hypothetical protein PHYSODRAFT_354799 [Phytophtho... [more]
XP_002286262.16.700e-8665.04proteasome subunit alpha type 7-1 [Thalassiosira p... [more]
XP_012197478.16.700e-8665.56hypothetical protein SPRG_03500 [Saprolegnia paras... [more]
OQR92356.16.700e-8666.39proteasome subunit alpha type-7, threonine proteas... [more]
XP_008875534.18.700e-8665.85hypothetical protein H310_10839 [Aphanomyces invad... [more]
OQS04766.11.900e-8565.15proteasome subunit alpha type-7, threonine proteas... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000370NSK000370Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G00810.1NO06G00810.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100014g43gene4404Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G00810.1NO06G00810.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G00810 ID=NO06G00810|Name=NO06G00810|organism=Nannochloropsis oceanica|type=gene|length=1296bp
ACCATCACAGTCAGAGGCACCTTTCATAGCCGTTGGACATCGTCGAGCAG
CCGCAGCCATGGCCAGTCGgtaagttatgagggaagggaagtgatgaaga
cgacgacgacgaattccagcgatgaagaaacattgtccaccgtaagacat
acagcgtggaccagcgtggaggaagtggaacattgtgtgcatagtggacg
agaaaatctgtgtcggaggcagcggacgcttgccgaaccataaaggaagg
ctacagggacgccagaagaagtcccttcaacggatccttatgtgcccttg
ctctctcctgtgtttcccaattcctgtcgcactcccctcccttcttctca
cacaagttttcttcccttctgcaccctatccatttaaaatagATACGACC
GCGCCATCACGGTCTTCTCGCCCGACGGGCACTTGTTCCAAGTAGAGTAT
GCCATCGAGGCTGTCAAGCGTGGCTCGTCGGCTGTTGGCGTGCGGGGCAA
GAACGCGGTTATTCTGGGAGTGGAGCGCAGGGCAACGGCCAAGCTGCAAG
ACCCTCGAACAATCAAGAAGATTTGCAAGATCGACGAGCACATCACGCTG
GCTTTTGCGGGCTTGACGGCCGACGCCCGCGTGCTTGTAAACAAGGCTCG
CCTGGAATGCCAAAGCTACCGCCTAACCTACGAGGATGCTCCCACGGTCG
AGTACATTGCGCGGTACATCGCCCGCACCCAACAAAAGTACACCCAGCGT
GGCGGTGTGCGGCCATTCGGCGTGTCATGTGTGATTGCTGGGACCAACCC
TGATGGGACTGCCGTGCTTTACCAGACGGACCCTGCAGGCACCTACTCGG
CTTGGAAGGCCACGGCAGTGGGAGGAAAGAACTCGTCCAATATGCAAGAG
TACCTGGAGAAGCAGTGGGAAGATGCTCTGGGGGAGGAGGAGGCGATTCG
ACTGACGGTCAAGACGTTGTTGGAGGTGGTGGATTCCGGGGCGAAGAACA
TGGAGGTGGCTATCATCAAAAACGGAGAGCCCATGCACATGCTTGATGAA
GCCACGCTGGCGGCACTTGCGGCTTCCATTGAGGCGGAGCAGGAGGAGGC
TAAGAATAAGGCAGTCGCTGGGGTGTCGGAGACCAAAGATTAGGATTTGG
GGAGAAACAGTGTGGAGAAGAAGTGGGTGGAAAGTGATTATGCTGGTAAA
GGTGAAGGGAGAAGAGAGGGGCTCCTCGCTTGACGGGATGTTGGATCATC
GCAGAGGAAAAGAAAGAAACAAGAGCATCAACAACAACAATGACAA
back to top

protein sequence of NO06G00810.1

>NO06G00810.1-protein ID=NO06G00810.1-protein|Name=NO06G00810.1|organism=Nannochloropsis oceanica|type=polypeptide|length=254bp
MASRYDRAITVFSPDGHLFQVEYAIEAVKRGSSAVGVRGKNAVILGVERR
ATAKLQDPRTIKKICKIDEHITLAFAGLTADARVLVNKARLECQSYRLTY
EDAPTVEYIARYIARTQQKYTQRGGVRPFGVSCVIAGTNPDGTAVLYQTD
PAGTYSAWKATAVGGKNSSNMQEYLEKQWEDALGEEEAIRLTVKTLLEVV
DSGAKNMEVAIIKNGEPMHMLDEATLAALAASIEAEQEEAKNKAVAGVSE
TKD*
back to top
Synonyms
Publications