NO06G00670, NO06G00670 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G00670 vs. NCBI_GenBank
Match: EWM26081.1 (Replication factor Mcm10 [Nannochloropsis gaditana]) HSP 1 Score: 464.5 bits (1194), Expect = 6.000e-127 Identity = 301/681 (44.20%), Postives = 392/681 (57.56%), Query Frame = 0 Query: 66 APLLPPTSLGDLVASRRKATPTTTLTTTKLIPFQLRTVNLSSDEIESLLQDRVLKRLSSLISFLHGETAASLPDFAIVGVLSKKGPRKLSRNGKDYAEWLIDDLEGRSVKILIFGGALVGGQSLPVGAVCLLLQPKPLDSGPGRLAAPSLAIYEPSQVVLVGISANFATCGFTDVRGFQCDKVYNRLMARFCEQHSRS-SSGRTDMQRGKVASGPRFTALPSDAATMVPTP-GQQCQGGTGLIVRPNL-IRNP--VPKKQAGAAAGSGKRKERLERMIKQGQPYRAYRWQPTLVNSSKKLDAVGAAASGTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDRWAGGARRGA---SGSVIVPQKMEGDRVREVAAILAMDEPKKDGDVLVPEPSRIFERGGDAVAYALFKHQQEAARMAREAAAFHCRQLQQKKSEAKAVQALKIRKGLGGTLRMAPKLAVSASIFNVPGTAPMPAGHGSRQQYRSGMKAEEAEKLMKSKSKHSAEARSELMGHLDGVFEALHEKEARAEELKVLSSIDITAFHCSECDRFYEKHPSLCAHNKHRLRKAPIKKRFFLCGNIGCTGETAVLGLTAPREACDRCGEKLWRAKGKGNTAAAGD---GKRGGVGNLILSISESNRNADVSTLY 736 APL P L A PT ++LIPF+L T+ SSDEIE+ + R L +++ + L P++A+VGVL +K PRK S+NG +Y W ID+L+G+S+KIL+FG A++ G+++P+GAVCLLL P+ S P AA SL I++P QV+ +G+SA++ATCGF D GF+CDKVYNR ARFC+ HS + S + +VA A+ S T P G + G I RP + + P + +K A K++E LE++IK+ QP+R+Y WQPTL +++ ++ + + T D GG G S + V Q + + VR +AAILA DE KDG+VL+PEPSRIF RG D+VAYA F+H+QEA R AR+ A RQLQQK+SEAKAV+A+ K +GGT+RM K T P AG+ RQ Y GM EAE LMKSKSKHSAEAR ELM HL GVFEAL EKE RAE K LSSI++ A C EC+R +EKHP LCA H L++ IKKRFF+CGN GC+ E ++LG AP EAC RCGEKLWRAKGKG+ AAAG K GVG LI ++SE NRNAD+S+LY Sbjct: 37 APLSPCKGLPLTHPCAIDAAPT---KMSRLIPFELSTLKKSSDEIENSIAGRPLLQVNDIGGVLS-------PNYALVGVLGEKEPRKQSKNGCNYIVWFIDNLKGQSIKILLFGDAVLSGENVPLGAVCLLLD--PVGSRPAPSAAMSLKIHKPHQVIQIGLSAHYATCGFIDPYGFECDKVYNRHNARFCKVHSATPPSSQALSLPNRVAITAPSRAITSSLPTGTTRPCGLRGHNGKPHISRPTMSVDRPSSLIQKPGKIARYQPKKRELLEKIIKRDQPHRSYTWQPTLSRTARTVNVPESRTNQT--------------------------------------------------------------FDGHVGGTNLGTGDRSARMDVQQTAKENGVRGIAAILAADELNKDGEVLIPEPSRIFARGPDSVAYAAFRHEQEAKRQARQVGALQYRQLQQKQSEAKAVRAMNFCKRMGGTIRMIQKPENVMLKPKPRMTVPSSAGN-RRQLYADGMGLNEAESLMKSKSKHSAEARGELMEHLHGVFEALGEKETRAEYFKNLSSIEVVAVSCQECNRLFEKHPRLCAKRGHILKRLTIKKRFFICGNQGCSEEVSMLGSAAPHEACSRCGEKLWRAKGKGSKAAAGGDTRAKSNGVGVLIPAVSEWNRNADLSSLY 642
BLAST of NO06G00670 vs. NCBI_GenBank
Match: XP_016167464.1 (protein MCM10 homolog isoform X1 [Arachis ipaensis]) HSP 1 Score: 84.0 bits (206), Expect = 2.200e-12 Identity = 56/193 (29.02%), Postives = 86/193 (44.56%), Query Frame = 0 Query: 94 KLIPFQLRTVNLSSDEIESLLQDRVLKRLSSLISFLHGETAASLPDFAIVGVLSKKGPRKLSRNGKDYAEWLIDDLEGRSVKILIFGGALVGGQSLPVGAVCLLLQPKPLDSGPGRLAAPSLAIYEPSQVVLVGISANFATCGFTDVRGFQCDKVYNRLMARFCEQHSRSSSGRTDMQRGKVASGPRFTALPS 287 K ++R L+S+EI D RLS + + L G+T + + VGVL++KGP + S GK Y W + L+ +V + +FG A G V L G SL+IY Q++ +G SA++ C G C V N+ +C+ H +SG+ R ++ G TA S Sbjct: 84 KFSGLRIRNQLLTSNEIRESFSDIRFVRLSVIKNLLIGDTFSG--SWVTVGVLTEKGPPRTSSTGKTYCIWKVGCLDENTVSLFLFGDAYQRNSQEQAGTVFALFNSAVRKDPKGN--GFSLSIYSSGQILKMGTSADYGVCKGKRADGMACTLVINKRSGAYCKYHKSKASGKYSTTRTELKGGNLHTAFRS 272
BLAST of NO06G00670 vs. NCBI_GenBank
Match: XP_020963287.1 (protein MCM10 homolog isoform X2 [Arachis ipaensis]) HSP 1 Score: 84.0 bits (206), Expect = 2.200e-12 Identity = 56/193 (29.02%), Postives = 86/193 (44.56%), Query Frame = 0 Query: 94 KLIPFQLRTVNLSSDEIESLLQDRVLKRLSSLISFLHGETAASLPDFAIVGVLSKKGPRKLSRNGKDYAEWLIDDLEGRSVKILIFGGALVGGQSLPVGAVCLLLQPKPLDSGPGRLAAPSLAIYEPSQVVLVGISANFATCGFTDVRGFQCDKVYNRLMARFCEQHSRSSSGRTDMQRGKVASGPRFTALPS 287 K ++R L+S+EI D RLS + + L G+T + + VGVL++KGP + S GK Y W + L+ +V + +FG A G V L G SL+IY Q++ +G SA++ C G C V N+ +C+ H +SG+ R ++ G TA S Sbjct: 84 KFSGLRIRNQLLTSNEIRESFSDIRFVRLSVIKNLLIGDTFSG--SWVTVGVLTEKGPPRTSSTGKTYCIWKVGCLDENTVSLFLFGDAYQRNSQEQAGTVFALFNSAVRKDPKGN--GFSLSIYSSGQILKMGTSADYGVCKGKRADGMACTLVINKRSGAYCKYHKSKASGKYSTTRTELKGGNLHTAFRS 272
BLAST of NO06G00670 vs. NCBI_GenBank
Match: XP_020983727.1 (protein MCM10 homolog isoform X3 [Arachis duranensis]) HSP 1 Score: 83.6 bits (205), Expect = 2.900e-12 Identity = 58/200 (29.00%), Postives = 91/200 (45.50%), Query Frame = 0 Query: 87 TTTLTTTKLIPFQLRTVNLSSDEIESLLQDRVLKRLSSLISFLHGETAASLPDFAIVGVLSKKGPRKLSRNGKDYAEWLIDDLEGRSVKILIFGGALVGGQSLPVGAVCLLLQPKPLDSGPGRLAAPSLAIYEPSQVVLVGISANFATCGFTDVRGFQCDKVYNRLMARFCEQHSRSSSGRTDMQRGKVASGPRFTALPS 287 T K ++R L+S+EI D RLS + + L G+T + + VGVL++KGP + S GK Y W + L+ +V + +FG A VGAV L + P + SL++Y Q++ +G SA++ C G C V N+ +C+ H +SG+ R ++ G TA S Sbjct: 77 TNDADVEKFSGLRIRNQLLTSNEIRESFSDIRFVRLSVIKNLLIGDTFSG--SWVTVGVLTEKGPPRTSSTGKTYCIWKVGCLDENTVSLFLFGDAYQRNSQEQVGAVFALFN-SAVRKDP-KANGFSLSVYSSGQILKMGTSADYGVCKGKRADGMACTLVINKRSGAYCKYHKSKASGKYSTMRTELKGGNLHTAFRS 272
BLAST of NO06G00670 vs. NCBI_GenBank
Match: PKA60775.1 (hypothetical protein AXF42_Ash006409 [Apostasia shenzhenica]) HSP 1 Score: 81.6 bits (200), Expect = 1.100e-11 Identity = 54/181 (29.83%), Postives = 92/181 (50.83%), Query Frame = 0 Query: 100 LRTVN--LSSDEIESLLQDRVLKRLSSLISFLHGETAASLPDFAIVGVLSKKGPRKLSRNGKDYAEWLIDDLEGRSVKILIFGGALVGGQSLPVGAVCLLLQPKPLDSGPGRLAAPSLAIYEPSQVVLVGISANFATCGFTDVRGFQCDKVYNRLMARFCEQHSRSSSGRTDMQRGKVASG 279 LR +N +SS E+ +L D R+S++ + L G+T + +A VGVL++KG K+S GK+Y+ + L+ +V + +FG A + VGA+ L G+ SL++Y SQ++ +G S+++ C G C + N+ +C+ HS SS R R ++ G Sbjct: 96 LRILNPLVSSTELSNLFSDMRFVRMSAIRNLLSGDTLSGF--WATVGVLTEKGVTKVSSAGKNYSICKMGCLDETTVSVFLFGDAYAMTSNERVGAMFALFNATVRRDSEGK--GFSLSVYSVSQILKLGTSSDYGVCKGQRKDGMACSMIINKTQGLYCKFHSSKSSQRYTTTRAELKGG 272
BLAST of NO06G00670 vs. NCBI_GenBank
Match: XP_020983725.1 (protein MCM10 homolog isoform X1 [Arachis duranensis]) HSP 1 Score: 81.3 bits (199), Expect = 1.400e-11 Identity = 55/192 (28.65%), Postives = 88/192 (45.83%), Query Frame = 0 Query: 87 TTTLTTTKLIPFQLRTVNLSSDEIESLLQDRVLKRLSSLISFLHGETAASLPDFAIVGVLSKKGPRKLSRNGKDYAEWLIDDLEGRSVKILIFGGALVGGQSLPVGAVCLLLQPKPLDSGPGRLAAPSLAIYEPSQVVLVGISANFATCGFTDVRGFQCDKVYNRLMARFCEQHSRSSSGRTDMQRGKVASG 279 T K ++R L+S+EI D RLS + + L G+T + + VGVL++KGP + S GK Y W + L+ +V + +FG A VGAV L + P + SL++Y Q++ +G SA++ C G C V N+ +C+ H +SG+ R ++ G Sbjct: 77 TNDADVEKFSGLRIRNQLLTSNEIRESFSDIRFVRLSVIKNLLIGDTFSG--SWVTVGVLTEKGPPRTSSTGKTYCIWKVGCLDENTVSLFLFGDAYQRNSQEQVGAVFALFN-SAVRKDP-KANGFSLSVYSSGQILKMGTSADYGVCKGKRADGMACTLVINKRSGAYCKYHKSKASGKYSTMRTELKGG 264
BLAST of NO06G00670 vs. NCBI_GenBank
Match: XP_020983726.1 (protein MCM10 homolog isoform X2 [Arachis duranensis]) HSP 1 Score: 81.3 bits (199), Expect = 1.400e-11 Identity = 55/192 (28.65%), Postives = 88/192 (45.83%), Query Frame = 0 Query: 87 TTTLTTTKLIPFQLRTVNLSSDEIESLLQDRVLKRLSSLISFLHGETAASLPDFAIVGVLSKKGPRKLSRNGKDYAEWLIDDLEGRSVKILIFGGALVGGQSLPVGAVCLLLQPKPLDSGPGRLAAPSLAIYEPSQVVLVGISANFATCGFTDVRGFQCDKVYNRLMARFCEQHSRSSSGRTDMQRGKVASG 279 T K ++R L+S+EI D RLS + + L G+T + + VGVL++KGP + S GK Y W + L+ +V + +FG A VGAV L + P + SL++Y Q++ +G SA++ C G C V N+ +C+ H +SG+ R ++ G Sbjct: 77 TNDADVEKFSGLRIRNQLLTSNEIRESFSDIRFVRLSVIKNLLIGDTFSG--SWVTVGVLTEKGPPRTSSTGKTYCIWKVGCLDENTVSLFLFGDAYQRNSQEQVGAVFALFN-SAVRKDP-KANGFSLSVYSSGQILKMGTSADYGVCKGKRADGMACTLVINKRSGAYCKYHKSKASGKYSTMRTELKGG 264
BLAST of NO06G00670 vs. NCBI_GenBank
Match: XP_020591027.1 (protein MCM10 homolog isoform X1 [Phalaenopsis equestris]) HSP 1 Score: 79.3 bits (194), Expect = 5.400e-11 Identity = 52/181 (28.73%), Postives = 88/181 (48.62%), Query Frame = 0 Query: 99 QLRTVNLSSDEIESLLQDRVLKRLSSLISFLHGETAASLP-DFAIVGVLSKKGPRKLSRNGKDYAEWLIDDLEGRSVKILIFGGALVGGQSLPVGAVCLLLQPKPLDSGPGRLAAPSLAIYEPSQVVLVGISANFATCGFTDVRGFQCDKVYNRLMARFCEQHSRSSSGRTDMQRGKVASG 279 ++R +S E+ + D R+S++ + L G+T LP +A VGVL++KG K+S +GK Y W + L+ + + +FG A + VG V L G+ SL++Y SQ++ +G SA++ C G C V N+ +C+ HS ++S R ++ G Sbjct: 95 KIRNQQVSPVELSNRFSDVRFVRMSAIRTLLSGDT---LPGSWATVGVLTEKGEAKMSSSGKSYCIWKMGCLDETNASVFLFGDAYKMNYNERVGTVFALFNSNVRKDDAGK--GFSLSLYSVSQILRIGTSADYGICKGKRKDGMACTMVINKNKMSYCKYHSSNASQNYTTARAELKGG 270
BLAST of NO06G00670 vs. NCBI_GenBank
Match: XP_020591030.1 (protein MCM10 homolog isoform X4 [Phalaenopsis equestris]) HSP 1 Score: 79.3 bits (194), Expect = 5.400e-11 Identity = 52/181 (28.73%), Postives = 88/181 (48.62%), Query Frame = 0 Query: 99 QLRTVNLSSDEIESLLQDRVLKRLSSLISFLHGETAASLP-DFAIVGVLSKKGPRKLSRNGKDYAEWLIDDLEGRSVKILIFGGALVGGQSLPVGAVCLLLQPKPLDSGPGRLAAPSLAIYEPSQVVLVGISANFATCGFTDVRGFQCDKVYNRLMARFCEQHSRSSSGRTDMQRGKVASG 279 ++R +S E+ + D R+S++ + L G+T LP +A VGVL++KG K+S +GK Y W + L+ + + +FG A + VG V L G+ SL++Y SQ++ +G SA++ C G C V N+ +C+ HS ++S R ++ G Sbjct: 95 KIRNQQVSPVELSNRFSDVRFVRMSAIRTLLSGDT---LPGSWATVGVLTEKGEAKMSSSGKSYCIWKMGCLDETNASVFLFGDAYKMNYNERVGTVFALFNSNVRKDDAGK--GFSLSLYSVSQILRIGTSADYGICKGKRKDGMACTMVINKNKMSYCKYHSSNASQNYTTARAELKGG 270
BLAST of NO06G00670 vs. NCBI_GenBank
Match: XP_020591029.1 (protein MCM10 homolog isoform X3 [Phalaenopsis equestris]) HSP 1 Score: 79.3 bits (194), Expect = 5.400e-11 Identity = 52/181 (28.73%), Postives = 88/181 (48.62%), Query Frame = 0 Query: 99 QLRTVNLSSDEIESLLQDRVLKRLSSLISFLHGETAASLP-DFAIVGVLSKKGPRKLSRNGKDYAEWLIDDLEGRSVKILIFGGALVGGQSLPVGAVCLLLQPKPLDSGPGRLAAPSLAIYEPSQVVLVGISANFATCGFTDVRGFQCDKVYNRLMARFCEQHSRSSSGRTDMQRGKVASG 279 ++R +S E+ + D R+S++ + L G+T LP +A VGVL++KG K+S +GK Y W + L+ + + +FG A + VG V L G+ SL++Y SQ++ +G SA++ C G C V N+ +C+ HS ++S R ++ G Sbjct: 95 KIRNQQVSPVELSNRFSDVRFVRMSAIRTLLSGDT---LPGSWATVGVLTEKGEAKMSSSGKSYCIWKMGCLDETNASVFLFGDAYKMNYNERVGTVFALFNSNVRKDDAGK--GFSLSLYSVSQILRIGTSADYGICKGKRKDGMACTMVINKNKMSYCKYHSSNASQNYTTARAELKGG 270 The following BLAST results are available for this feature:
BLAST of NO06G00670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G00670 ID=NO06G00670|Name=NO06G00670|organism=Nannochloropsis oceanica|type=gene|length=2415bpback to top protein sequence of NO06G00670.1 >NO06G00670.1-protein ID=NO06G00670.1-protein|Name=NO06G00670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=737bpback to top Synonyms
Publications
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