NO06G00600, NO06G00600 (gene) Nannochloropsis oceanica

Overview
NameNO06G00600
Unique NameNO06G00600
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length474
Alignment locationchr6:228989..229462 -

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Properties
Property NameValue
DescriptionUPF0587 protein GA18326
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:228989..229462 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008584DUF866_euk
Homology
BLAST of NO06G00600 vs. NCBI_GenBank
Match: XP_005856358.1 (hypothetical protein NGA_2119900 [Nannochloropsis gaditana CCMP526] >EKU20014.1 hypothetical protein NGA_2119900 [Nannochloropsis gaditana CCMP526] >EWM26098.1 Protein of unknown function DUF866, eukaryotic [Nannochloropsis gaditana])

HSP 1 Score: 239.2 bits (609), Expect = 8.700e-60
Identity = 116/156 (74.36%), Postives = 135/156 (86.54%), Query Frame = 0
Query:    1 MPVFALQLKADLEGVSSINTTGRYCLDLSKDGEGKKGIYIDQSDEVEMADSRGTCHLQVKLPGMTKPANLVILETLSYTAGDSGNFKTVARIEARGLDVDAWQAREDFVVVSEGGKRFENADLGEGDYTEYDEEHDQAVSVLEIETKVVVVRDLKK 157
            MPVFALQLKA+LEGVS I TTGRYC+DLSKDGE K+G++ID S+ V MADSRGTCH+Q+KLPGMTKPANL ILET  YT  DSG F+TVARIEARG+DV+AW+ R+DFVVVSEGG RFE A+L +GDYTEYDEEH+QAVSVLE+ T VVV +  K+
Sbjct:    1 MPVFALQLKAELEGVSRIETTGRYCVDLSKDGECKRGVFIDMSESVAMADSRGTCHMQIKLPGMTKPANLTILETAPYTTSDSGAFQTVARIEARGVDVEAWRVRDDFVVVSEGGTRFEAANLVDGDYTEYDEEHNQAVSVLEVATNVVVGKGPKR 156          
BLAST of NO06G00600 vs. NCBI_GenBank
Match: OQR90802.1 (hypothetical protein ACHHYP_05237 [Achlya hypogyna])

HSP 1 Score: 104.8 bits (260), Expect = 2.600e-19
Identity = 61/163 (37.42%), Postives = 92/163 (56.44%), Query Frame = 0
Query:    1 MPVFALQLKADLEGVSSINT--TGRYCLDLSK--DGEGKKGIYIDQSDEVEMADSRGTCHLQVKLPGMTKPANLVILE-----TLSYTAGDSGNFKTVARIEARGLDVDAWQAREDFVVVSEGGKR-FENADLGEGDYTEYDEEHDQAVSVLEIETKVVVVRD 154
            M +F L +KADLE + SI      R+CLD+ +    E ++G+++   +E+E+  SRGT H  +K PG  K + L ++      T + TA DSG +  +   E RGL+   W A   + VVS GG   FE+ +L E D+ +YDEE DQ+V +  +E K  V R+
Sbjct:    1 MVLFVLYVKADLENIESIEAPPLHRWCLDIKEPTSDERREGVWVSDEEELEVTGSRGTAHFLMKWPGAKKESQLTVVRDIKKLTRAITANDSGEYVPIVGFECRGLEPYNWSAEGGYKVVSAGGSTVFEDVNLSE-DWADYDEEGDQSVGIYSLEHKFEVRRE 162          
BLAST of NO06G00600 vs. NCBI_GenBank
Match: XP_008609760.1 (hypothetical protein SDRG_05800 [Saprolegnia diclina VS20] >EQC36979.1 hypothetical protein SDRG_05800 [Saprolegnia diclina VS20])

HSP 1 Score: 102.4 bits (254), Expect = 1.300e-18
Identity = 59/163 (36.20%), Postives = 93/163 (57.06%), Query Frame = 0
Query:    1 MPVFALQLKADLEGVSSINTTG--RYCLDLSK--DGEGKKGIYIDQSDEVEMADSRGTCHLQVKLPGMTKPANLVILE-----TLSYTAGDSGNFKTVARIEARGLDVDAWQAREDF-VVVSEGGKRFENADLGEGDYTEYDEEHDQAVSVLEIETKVVVVRD 154
            M +F L +KADLE V SI      R+CLD+ +    E ++GI++   +E+E++ SRGT H  +K PG  K + L ++      T + +A DSG +  +   E RG++  +W   + + +  ++ G  FEN +L E D+ EYDEE DQ+V V  +E K  V R+
Sbjct:    1 MVLFVLYVKADLENVGSIEAPALHRWCLDIKEPTGDETREGIWVSDEEELEVSGSRGTAHFLMKWPGAKKESQLTVVRDIKKLTRAISANDSGEYVPLVGFECRGIEPVSWSPEDGYKITCADSGTVFENVNLSE-DWAEYDEEGDQSVGVYAVEHKFEVRRE 162          
BLAST of NO06G00600 vs. NCBI_GenBank
Match: XP_002955230.1 (hypothetical protein VOLCADRAFT_109954 [Volvox carteri f. nagariensis] >EFJ43749.1 hypothetical protein VOLCADRAFT_109954 [Volvox carteri f. nagariensis])

HSP 1 Score: 101.7 bits (252), Expect = 2.200e-18
Identity = 58/161 (36.02%), Postives = 95/161 (59.01%), Query Frame = 0
Query:    1 MPVFALQLKADLEGVSSIN--TTGRYCLDL--SKDGEGKKGIYIDQSDEVEMADSRGTCHLQVKL-PGMTKPANLVILE----TLSYTAGDSGNFKTVARIEARGLDVDAWQAREDFVVVSEGGKRFENADLGEGDYTEYDEEHDQAVSVLEIETKVVVVR 153
            MPVF L ++A+LE V S++  ++  +CLD+  S   E KKG+Y+  +++ E++ S+GT +L +K   G  K A++ + E    T  YTA D G F  +   E RGLD  A+    D+ VVS GG +++N DL E ++++Y E+   +V +   E+K  + R
Sbjct:    1 MPVFLLSIRAELENVESLSIPSSSHFCLDVKESAGSEEKKGVYVTSTEQHELSGSKGTANLVMKFAKGSKKEASINVQEIKGVTRPYTADDDGKFVPIIAFECRGLDPIAFHPEGDWRVVSAGGTKYDNVDLKEAEWSDYCEKAAASVGIYNFESKFELYR 161          
BLAST of NO06G00600 vs. NCBI_GenBank
Match: XP_012205539.1 (hypothetical protein SPRG_10499 [Saprolegnia parasitica CBS 223.65] >KDO23721.1 hypothetical protein SPRG_10499 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 100.1 bits (248), Expect = 6.300e-18
Identity = 59/163 (36.20%), Postives = 92/163 (56.44%), Query Frame = 0
Query:    1 MPVFALQLKADLEGVSSINTTG--RYCLDLSK--DGEGKKGIYIDQSDEVEMADSRGTCHLQVKLPGMTKPANLVILE-----TLSYTAGDSGNFKTVARIEARGLDVDAWQAREDF-VVVSEGGKRFENADLGEGDYTEYDEEHDQAVSVLEIETKVVVVRD 154
            M +F L +KADLE V SI      R+CLD+ +    E ++GI++   +E+E++ SRGT H  +K PG  K + L ++      T + +A DSG F  +   E RG++  +W     + +  ++ G  FE+ +L E D+ EYDEE DQ+V V  +E K  V R+
Sbjct:    1 MVLFVLYVKADLENVQSIEAPALHRWCLDIKEPTGDETREGIWVSDEEELEVSGSRGTAHFLMKWPGAKKESQLTVVRDIKKLTRAISANDSGEFVPLVGFECRGIEPVSWSPEGGYKITCADSGTVFEDVNLSE-DWAEYDEEGDQSVGVYAVEHKFEVRRE 162          
BLAST of NO06G00600 vs. NCBI_GenBank
Match: PNW78479.1 (hypothetical protein CHLRE_09g395800v5 [Chlamydomonas reinhardtii])

HSP 1 Score: 96.7 bits (239), Expect = 7.000e-17
Identity = 57/156 (36.54%), Postives = 91/156 (58.33%), Query Frame = 0
Query:    1 MPVFALQLKADLEGVS--SINTTGRYCLDL--SKDGEGKKGIYIDQSDEVEMADSRGTCHLQVKL-PGMTKPANLVILE----TLSYTAGDSGNFKTVARIEARGLDVDAWQAREDFVVVSEGGKRFENADLGEGDYTEYDEEHDQAVSVLEIETK 148
            MP F L ++A+L+ V   SI +T  +CLD+  S   E KKG+Y+  ++E E+  S+GT +L +K   G  K +++ +LE    T  YTA D G F  +   E RGL+  A+    D+ VVS GG +++N DL E ++++Y E+   +V +   E+K
Sbjct:    1 MPTFLLCIRAELDNVDTISIPSTTHWCLDVKESAGSEEKKGVYVTSTEEHELNGSKGTANLVMKFAKGSKKESSVNVLEIKGVTRPYTADDDGKFVPIIAFECRGLEPIAFHPEGDWHVVSSGGTKYDNVDLKENEWSDYCEKAAASVGIYSFESK 156          
BLAST of NO06G00600 vs. NCBI_GenBank
Match: XP_008874544.1 (hypothetical protein H310_10075 [Aphanomyces invadans] >ETV96767.1 hypothetical protein H310_10075 [Aphanomyces invadans])

HSP 1 Score: 92.8 bits (229), Expect = 1.000e-15
Identity = 57/165 (34.55%), Postives = 87/165 (52.73%), Query Frame = 0
Query:    1 MPVFALQLKADLEGVS--SINTTGRYCLDLSK--DGEGKKGIYIDQSDEVEMADSRGTCHLQVKLPGMTKPANLVILE-----TLSYTAGDSGNFKTVARIEARGLDVDAWQAREDFVVVSEGGKR-FENADLGEGDYTEYDEEHDQAVSVLEIETKVVVVRDLK 156
            M +F L +KADL+ +         R+CLD+ +    E ++G+++   + V++   RG  H  +K PG  K + L I+      T   T  DSG F  V   + RGL+  AW     + + S GG   F + +L E D++EYDE+ +QAV +  IE K VVV+D K
Sbjct:    1 MVLFVLYVKADLDAIDLWEFPVNHRWCLDIKEPTSEEKREGVWVCDDELVDVPGGRGEAHFLMKWPGAKKESQLTIIRDVKKLTRPITGADSGEFVPVVGFDCRGLEPVAWYPEGGYTLTSAGGTAVFRDVNLAE-DWSEYDEDGEQAVGIYSIEHKFVVVKDKK 164          
BLAST of NO06G00600 vs. NCBI_GenBank
Match: KXZ49970.1 (hypothetical protein GPECTOR_18g127 [Gonium pectorale])

HSP 1 Score: 92.4 bits (228), Expect = 1.300e-15
Identity = 53/140 (37.86%), Postives = 85/140 (60.71%), Query Frame = 0
Query:    4 FALQLKADLEGVS--SINTTGRYCLDL--SKDGEGKKGIYIDQSDEVEMADSRGTCHLQVKL-PGMTKPANLVILE----TLSYTAGDSGNFKTVARIEARGLDVDAWQAREDFVVVSEGGKRFENADLGEGDYTEYDEE 135
            F L ++A+L+ V   SI +T  +CLD+  S   E KKG+Y+  +++ E++ S+GT HL +K   G  K A++ ++E    T +YTA D G +  +   E RGLD  A+    D+ VVS GG +++N DL E ++T+Y E+
Sbjct:   11 FLLYIRAELDNVETLSIPSTTHWCLDVKESAGSEEKKGVYVTSTEQHELSGSKGTAHLVMKFAKGSKKEASVNVMEIKGVTRAYTAEDDGKWVPIIAFECRGLDPIAYHPEGDWHVVSAGGTKYDNVDLKEAEWTDYCEK 150          
BLAST of NO06G00600 vs. NCBI_GenBank
Match: OQS04086.1 (hypothetical protein THRCLA_20979 [Thraustotheca clavata])

HSP 1 Score: 92.4 bits (228), Expect = 1.300e-15
Identity = 55/162 (33.95%), Postives = 88/162 (54.32%), Query Frame = 0
Query:    1 MPVFALQLKADLEGVSSINT--TGRYCLDLSK--DGEGKKGIYIDQSDEVEMADSRGTCHLQVKLPGMTKPANLVILE-----TLSYTAGDSGNFKTVARIEARGLDVDAWQAREDFVVVSEGGKR-FENADLGEGDYTEYDEEHDQAVSVLEIETKVVVVR 153
            M +F L +KADLE +  I      R+CLDL +    E ++G+++ + +E+E++ SRGT H  +K PG  K + L ++      T +  A DSG F      + RGL+   W   + + V + G    FE+ +L E D+ +YDEE DQ+V V  +E K  + +
Sbjct:    1 MVLFVLYVKADLENIEKIEAPPLHRWCLDLKEPTGDERRQGVWVSEEEELEVSGSRGTAHFLMKWPGAKKESQLTVVRDIKKLTRAIGAEDSGKFVPFVGFDCRGLEPYGWSPEDGYKVTAAGETSVFEDVNLSE-DWADYDEEGDQSVGVYGVEYKFGITK 161          
BLAST of NO06G00600 vs. NCBI_GenBank
Match: XP_001694495.1 (predicted protein [Chlamydomonas reinhardtii])

HSP 1 Score: 89.0 bits (219), Expect = 1.500e-14
Identity = 54/160 (33.75%), Postives = 89/160 (55.62%), Query Frame = 0
Query:    1 MPVFALQLKADLEGVS--SINTTGRYCLDL--SKDGEGKKGIYIDQSDEVEMADSRGTCHLQVKL-PGMTKPANLVILETLSYT--------AGDSGNFKTVARIEARGLDVDAWQAREDFVVVSEGGKRFENADLGEGDYTEYDEEHDQAVSVLEIETK 148
            MP F L ++A+L+ V   SI +T  +CLD+  S   E KKG+Y+  ++E E+  S+GT +L +K   G  K +++ +LE    T        + D G F  +   E RGL+  A+    D+ VVS GG +++N DL E ++++Y E+   +V +   E+K
Sbjct:    1 MPTFLLCIRAELDNVDTISIPSTTHWCLDVKESAGSEEKKGVYVTSTEEHELNGSKGTANLVMKFAKGSKKESSVNVLEIKGVTRPCDAELASDDDGKFVPIIAFECRGLEPIAFHPEGDWHVVSSGGTKYDNVDLKENEWSDYCEKAAASVGIYSFESK 160          
The following BLAST results are available for this feature:
BLAST of NO06G00600 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005856358.18.700e-6074.36hypothetical protein NGA_2119900 [Nannochloropsis ... [more]
OQR90802.12.600e-1937.42hypothetical protein ACHHYP_05237 [Achlya hypogyna... [more]
XP_008609760.11.300e-1836.20hypothetical protein SDRG_05800 [Saprolegnia dicli... [more]
XP_002955230.12.200e-1836.02hypothetical protein VOLCADRAFT_109954 [Volvox car... [more]
XP_012205539.16.300e-1836.20hypothetical protein SPRG_10499 [Saprolegnia paras... [more]
PNW78479.17.000e-1736.54hypothetical protein CHLRE_09g395800v5 [Chlamydomo... [more]
XP_008874544.11.000e-1534.55hypothetical protein H310_10075 [Aphanomyces invad... [more]
KXZ49970.11.300e-1537.86hypothetical protein GPECTOR_18g127 [Gonium pector... [more]
OQS04086.11.300e-1533.95hypothetical protein THRCLA_20979 [Thraustotheca c... [more]
XP_001694495.11.500e-1433.75predicted protein [Chlamydomonas reinhardtii][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL091nonsL091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000391NSK000391Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G00600.1NO06G00600.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100014g65gene4425Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G00600.1NO06G00600.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G00600 ID=NO06G00600|Name=NO06G00600|organism=Nannochloropsis oceanica|type=gene|length=474bp
ATGCCTGTCTTCGCCCTCCAACTCAAGGCGGACCTCGAGGGCGTCTCAAG
CATCAACACCACGGGACGGTATTGCCTGGATCTTAGCAAGGACGGGGAGG
GTAAGAAGGGCATCTACATCGACCAATCTGACGAGGTTGAGATGGCCGAC
AGCCGGGGCACATGCCACCTGCAGGTAAAGCTCCCCGGTATGACGAAACC
CGCCAACCTCGTAATTCTCGAGACTCTTTCCTACACTGCCGGGGACAGCG
GCAACTTTAAGACGGTGGCACGCATCGAGGCTAGGGGCCTGGACGTGGAT
GCGTGGCAAGCGCGCGAGGATTTTGTGGTCGTGTCCGAAGGGGGTAAACG
GTTCGAGAATGCGGACTTGGGCGAGGGAGACTATACAGAATATGACGAGG
AGCACGATCAGGCTGTGTCGGTTCTTGAAATTGAGACAAAGGTCGTTGTG
GTGAGGGACCTAAAAAAAAAGTGA
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protein sequence of NO06G00600.1

>NO06G00600.1-protein ID=NO06G00600.1-protein|Name=NO06G00600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=158bp
MPVFALQLKADLEGVSSINTTGRYCLDLSKDGEGKKGIYIDQSDEVEMAD
SRGTCHLQVKLPGMTKPANLVILETLSYTAGDSGNFKTVARIEARGLDVD
AWQAREDFVVVSEGGKRFENADLGEGDYTEYDEEHDQAVSVLEIETKVVV
VRDLKKK*
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Synonyms
Publications