NO06G00600, NO06G00600 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G00600 vs. NCBI_GenBank
Match: XP_005856358.1 (hypothetical protein NGA_2119900 [Nannochloropsis gaditana CCMP526] >EKU20014.1 hypothetical protein NGA_2119900 [Nannochloropsis gaditana CCMP526] >EWM26098.1 Protein of unknown function DUF866, eukaryotic [Nannochloropsis gaditana]) HSP 1 Score: 239.2 bits (609), Expect = 8.700e-60 Identity = 116/156 (74.36%), Postives = 135/156 (86.54%), Query Frame = 0 Query: 1 MPVFALQLKADLEGVSSINTTGRYCLDLSKDGEGKKGIYIDQSDEVEMADSRGTCHLQVKLPGMTKPANLVILETLSYTAGDSGNFKTVARIEARGLDVDAWQAREDFVVVSEGGKRFENADLGEGDYTEYDEEHDQAVSVLEIETKVVVVRDLKK 157 MPVFALQLKA+LEGVS I TTGRYC+DLSKDGE K+G++ID S+ V MADSRGTCH+Q+KLPGMTKPANL ILET YT DSG F+TVARIEARG+DV+AW+ R+DFVVVSEGG RFE A+L +GDYTEYDEEH+QAVSVLE+ T VVV + K+ Sbjct: 1 MPVFALQLKAELEGVSRIETTGRYCVDLSKDGECKRGVFIDMSESVAMADSRGTCHMQIKLPGMTKPANLTILETAPYTTSDSGAFQTVARIEARGVDVEAWRVRDDFVVVSEGGTRFEAANLVDGDYTEYDEEHNQAVSVLEVATNVVVGKGPKR 156
BLAST of NO06G00600 vs. NCBI_GenBank
Match: OQR90802.1 (hypothetical protein ACHHYP_05237 [Achlya hypogyna]) HSP 1 Score: 104.8 bits (260), Expect = 2.600e-19 Identity = 61/163 (37.42%), Postives = 92/163 (56.44%), Query Frame = 0 Query: 1 MPVFALQLKADLEGVSSINT--TGRYCLDLSK--DGEGKKGIYIDQSDEVEMADSRGTCHLQVKLPGMTKPANLVILE-----TLSYTAGDSGNFKTVARIEARGLDVDAWQAREDFVVVSEGGKR-FENADLGEGDYTEYDEEHDQAVSVLEIETKVVVVRD 154 M +F L +KADLE + SI R+CLD+ + E ++G+++ +E+E+ SRGT H +K PG K + L ++ T + TA DSG + + E RGL+ W A + VVS GG FE+ +L E D+ +YDEE DQ+V + +E K V R+ Sbjct: 1 MVLFVLYVKADLENIESIEAPPLHRWCLDIKEPTSDERREGVWVSDEEELEVTGSRGTAHFLMKWPGAKKESQLTVVRDIKKLTRAITANDSGEYVPIVGFECRGLEPYNWSAEGGYKVVSAGGSTVFEDVNLSE-DWADYDEEGDQSVGIYSLEHKFEVRRE 162
BLAST of NO06G00600 vs. NCBI_GenBank
Match: XP_008609760.1 (hypothetical protein SDRG_05800 [Saprolegnia diclina VS20] >EQC36979.1 hypothetical protein SDRG_05800 [Saprolegnia diclina VS20]) HSP 1 Score: 102.4 bits (254), Expect = 1.300e-18 Identity = 59/163 (36.20%), Postives = 93/163 (57.06%), Query Frame = 0 Query: 1 MPVFALQLKADLEGVSSINTTG--RYCLDLSK--DGEGKKGIYIDQSDEVEMADSRGTCHLQVKLPGMTKPANLVILE-----TLSYTAGDSGNFKTVARIEARGLDVDAWQAREDF-VVVSEGGKRFENADLGEGDYTEYDEEHDQAVSVLEIETKVVVVRD 154 M +F L +KADLE V SI R+CLD+ + E ++GI++ +E+E++ SRGT H +K PG K + L ++ T + +A DSG + + E RG++ +W + + + ++ G FEN +L E D+ EYDEE DQ+V V +E K V R+ Sbjct: 1 MVLFVLYVKADLENVGSIEAPALHRWCLDIKEPTGDETREGIWVSDEEELEVSGSRGTAHFLMKWPGAKKESQLTVVRDIKKLTRAISANDSGEYVPLVGFECRGIEPVSWSPEDGYKITCADSGTVFENVNLSE-DWAEYDEEGDQSVGVYAVEHKFEVRRE 162
BLAST of NO06G00600 vs. NCBI_GenBank
Match: XP_002955230.1 (hypothetical protein VOLCADRAFT_109954 [Volvox carteri f. nagariensis] >EFJ43749.1 hypothetical protein VOLCADRAFT_109954 [Volvox carteri f. nagariensis]) HSP 1 Score: 101.7 bits (252), Expect = 2.200e-18 Identity = 58/161 (36.02%), Postives = 95/161 (59.01%), Query Frame = 0 Query: 1 MPVFALQLKADLEGVSSIN--TTGRYCLDL--SKDGEGKKGIYIDQSDEVEMADSRGTCHLQVKL-PGMTKPANLVILE----TLSYTAGDSGNFKTVARIEARGLDVDAWQAREDFVVVSEGGKRFENADLGEGDYTEYDEEHDQAVSVLEIETKVVVVR 153 MPVF L ++A+LE V S++ ++ +CLD+ S E KKG+Y+ +++ E++ S+GT +L +K G K A++ + E T YTA D G F + E RGLD A+ D+ VVS GG +++N DL E ++++Y E+ +V + E+K + R Sbjct: 1 MPVFLLSIRAELENVESLSIPSSSHFCLDVKESAGSEEKKGVYVTSTEQHELSGSKGTANLVMKFAKGSKKEASINVQEIKGVTRPYTADDDGKFVPIIAFECRGLDPIAFHPEGDWRVVSAGGTKYDNVDLKEAEWSDYCEKAAASVGIYNFESKFELYR 161
BLAST of NO06G00600 vs. NCBI_GenBank
Match: XP_012205539.1 (hypothetical protein SPRG_10499 [Saprolegnia parasitica CBS 223.65] >KDO23721.1 hypothetical protein SPRG_10499 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 100.1 bits (248), Expect = 6.300e-18 Identity = 59/163 (36.20%), Postives = 92/163 (56.44%), Query Frame = 0 Query: 1 MPVFALQLKADLEGVSSINTTG--RYCLDLSK--DGEGKKGIYIDQSDEVEMADSRGTCHLQVKLPGMTKPANLVILE-----TLSYTAGDSGNFKTVARIEARGLDVDAWQAREDF-VVVSEGGKRFENADLGEGDYTEYDEEHDQAVSVLEIETKVVVVRD 154 M +F L +KADLE V SI R+CLD+ + E ++GI++ +E+E++ SRGT H +K PG K + L ++ T + +A DSG F + E RG++ +W + + ++ G FE+ +L E D+ EYDEE DQ+V V +E K V R+ Sbjct: 1 MVLFVLYVKADLENVQSIEAPALHRWCLDIKEPTGDETREGIWVSDEEELEVSGSRGTAHFLMKWPGAKKESQLTVVRDIKKLTRAISANDSGEFVPLVGFECRGIEPVSWSPEGGYKITCADSGTVFEDVNLSE-DWAEYDEEGDQSVGVYAVEHKFEVRRE 162
BLAST of NO06G00600 vs. NCBI_GenBank
Match: PNW78479.1 (hypothetical protein CHLRE_09g395800v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 96.7 bits (239), Expect = 7.000e-17 Identity = 57/156 (36.54%), Postives = 91/156 (58.33%), Query Frame = 0 Query: 1 MPVFALQLKADLEGVS--SINTTGRYCLDL--SKDGEGKKGIYIDQSDEVEMADSRGTCHLQVKL-PGMTKPANLVILE----TLSYTAGDSGNFKTVARIEARGLDVDAWQAREDFVVVSEGGKRFENADLGEGDYTEYDEEHDQAVSVLEIETK 148 MP F L ++A+L+ V SI +T +CLD+ S E KKG+Y+ ++E E+ S+GT +L +K G K +++ +LE T YTA D G F + E RGL+ A+ D+ VVS GG +++N DL E ++++Y E+ +V + E+K Sbjct: 1 MPTFLLCIRAELDNVDTISIPSTTHWCLDVKESAGSEEKKGVYVTSTEEHELNGSKGTANLVMKFAKGSKKESSVNVLEIKGVTRPYTADDDGKFVPIIAFECRGLEPIAFHPEGDWHVVSSGGTKYDNVDLKENEWSDYCEKAAASVGIYSFESK 156
BLAST of NO06G00600 vs. NCBI_GenBank
Match: XP_008874544.1 (hypothetical protein H310_10075 [Aphanomyces invadans] >ETV96767.1 hypothetical protein H310_10075 [Aphanomyces invadans]) HSP 1 Score: 92.8 bits (229), Expect = 1.000e-15 Identity = 57/165 (34.55%), Postives = 87/165 (52.73%), Query Frame = 0 Query: 1 MPVFALQLKADLEGVS--SINTTGRYCLDLSK--DGEGKKGIYIDQSDEVEMADSRGTCHLQVKLPGMTKPANLVILE-----TLSYTAGDSGNFKTVARIEARGLDVDAWQAREDFVVVSEGGKR-FENADLGEGDYTEYDEEHDQAVSVLEIETKVVVVRDLK 156 M +F L +KADL+ + R+CLD+ + E ++G+++ + V++ RG H +K PG K + L I+ T T DSG F V + RGL+ AW + + S GG F + +L E D++EYDE+ +QAV + IE K VVV+D K Sbjct: 1 MVLFVLYVKADLDAIDLWEFPVNHRWCLDIKEPTSEEKREGVWVCDDELVDVPGGRGEAHFLMKWPGAKKESQLTIIRDVKKLTRPITGADSGEFVPVVGFDCRGLEPVAWYPEGGYTLTSAGGTAVFRDVNLAE-DWSEYDEDGEQAVGIYSIEHKFVVVKDKK 164
BLAST of NO06G00600 vs. NCBI_GenBank
Match: KXZ49970.1 (hypothetical protein GPECTOR_18g127 [Gonium pectorale]) HSP 1 Score: 92.4 bits (228), Expect = 1.300e-15 Identity = 53/140 (37.86%), Postives = 85/140 (60.71%), Query Frame = 0 Query: 4 FALQLKADLEGVS--SINTTGRYCLDL--SKDGEGKKGIYIDQSDEVEMADSRGTCHLQVKL-PGMTKPANLVILE----TLSYTAGDSGNFKTVARIEARGLDVDAWQAREDFVVVSEGGKRFENADLGEGDYTEYDEE 135 F L ++A+L+ V SI +T +CLD+ S E KKG+Y+ +++ E++ S+GT HL +K G K A++ ++E T +YTA D G + + E RGLD A+ D+ VVS GG +++N DL E ++T+Y E+ Sbjct: 11 FLLYIRAELDNVETLSIPSTTHWCLDVKESAGSEEKKGVYVTSTEQHELSGSKGTAHLVMKFAKGSKKEASVNVMEIKGVTRAYTAEDDGKWVPIIAFECRGLDPIAYHPEGDWHVVSAGGTKYDNVDLKEAEWTDYCEK 150
BLAST of NO06G00600 vs. NCBI_GenBank
Match: OQS04086.1 (hypothetical protein THRCLA_20979 [Thraustotheca clavata]) HSP 1 Score: 92.4 bits (228), Expect = 1.300e-15 Identity = 55/162 (33.95%), Postives = 88/162 (54.32%), Query Frame = 0 Query: 1 MPVFALQLKADLEGVSSINT--TGRYCLDLSK--DGEGKKGIYIDQSDEVEMADSRGTCHLQVKLPGMTKPANLVILE-----TLSYTAGDSGNFKTVARIEARGLDVDAWQAREDFVVVSEGGKR-FENADLGEGDYTEYDEEHDQAVSVLEIETKVVVVR 153 M +F L +KADLE + I R+CLDL + E ++G+++ + +E+E++ SRGT H +K PG K + L ++ T + A DSG F + RGL+ W + + V + G FE+ +L E D+ +YDEE DQ+V V +E K + + Sbjct: 1 MVLFVLYVKADLENIEKIEAPPLHRWCLDLKEPTGDERRQGVWVSEEEELEVSGSRGTAHFLMKWPGAKKESQLTVVRDIKKLTRAIGAEDSGKFVPFVGFDCRGLEPYGWSPEDGYKVTAAGETSVFEDVNLSE-DWADYDEEGDQSVGVYGVEYKFGITK 161
BLAST of NO06G00600 vs. NCBI_GenBank
Match: XP_001694495.1 (predicted protein [Chlamydomonas reinhardtii]) HSP 1 Score: 89.0 bits (219), Expect = 1.500e-14 Identity = 54/160 (33.75%), Postives = 89/160 (55.62%), Query Frame = 0 Query: 1 MPVFALQLKADLEGVS--SINTTGRYCLDL--SKDGEGKKGIYIDQSDEVEMADSRGTCHLQVKL-PGMTKPANLVILETLSYT--------AGDSGNFKTVARIEARGLDVDAWQAREDFVVVSEGGKRFENADLGEGDYTEYDEEHDQAVSVLEIETK 148 MP F L ++A+L+ V SI +T +CLD+ S E KKG+Y+ ++E E+ S+GT +L +K G K +++ +LE T + D G F + E RGL+ A+ D+ VVS GG +++N DL E ++++Y E+ +V + E+K Sbjct: 1 MPTFLLCIRAELDNVDTISIPSTTHWCLDVKESAGSEEKKGVYVTSTEEHELNGSKGTANLVMKFAKGSKKESSVNVLEIKGVTRPCDAELASDDDGKFVPIIAFECRGLEPIAFHPEGDWHVVSSGGTKYDNVDLKENEWSDYCEKAAASVGIYSFESK 160 The following BLAST results are available for this feature:
BLAST of NO06G00600 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G00600 ID=NO06G00600|Name=NO06G00600|organism=Nannochloropsis oceanica|type=gene|length=474bpback to top protein sequence of NO06G00600.1 >NO06G00600.1-protein ID=NO06G00600.1-protein|Name=NO06G00600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=158bpback to top Synonyms
Publications
|