NO06G00540, NO06G00540 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO06G00540
Unique Name	NO06G00540
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2357
Alignment location	chr6:217767..220123 +

Link to JBrowse

Properties


Property Name	Value
Description	Kinesin-like protein

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr6	genome	chr6:217767..220123 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003777	microtubule motor activity
GO:0008017	microtubule binding
GO:0005524	ATP binding
GO:0005488	binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007018	microtubule-based movement

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR027640	Kinesin-like_fam
IPR001752	Kinesin_motor_dom

Homology

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BLAST of NO06G00540 vs. NCBI_GenBank
Match: EWM26127.1 (kinesin-like protein kif13a [Nannochloropsis gaditana])

HSP 1 Score: 536.2 bits (1380), Expect = 1.200e-148
Identity = 311/505 (61.58%), Postives = 355/505 (70.30%), Query Frame = 0

Query:   10 GDEWVTVAIRVKALDPLPDGELDSFCVAPLQSKAKNTGLSIDGQKSGANAFHFDSVHWSLGKG--------------NGGMDAQESTQEAMYEDLGAPVVTSVLAGFNACIFAYGQTGSGKTYTMMGNYDNIASADRGLIPRISEAIFRKAAAGGTSGSARNGKMITTVESTAAGSFEITHAFDVTYVELYLERVHDLL-ALPHSGXXXXXXXXXXXXXADSPSPSSPMSSPGQTALRVREHPKLGPYVDGATSTRVSSYEEVMALLETGNRNRMVAATELNATSSRSHAIFTIQYTRTKREVSPVSLRRGVGKGDGEGSAPADAAVSLQQTSKLSLIDLAGSENAGKSGTKGERLKEGGSINKSLLTLGLVIKSLAMTKQHQQREGWGSPGGGRGXXGEPRRLVPYRDSALTFLLKDSLGGNSRTTMLATIRPGLAFYEETLRTLRYADRAKSIVNQAVVNEDPITRKIRSLHDQIDVLAGRLAEAQKKEEEKDQEIQVLSDQL 500
            GD+ VTVA+RVK +D LP+G  DS CV P ++ A NTGL IDGQ+   N F FDS+HWSLG G               G +   ES+Q +++EDLG PVV+SVLAG+N C+FAYGQTGSGKTYTMMG YD+IAS  RGLIPRISEA+F   A                VES A   FE+THAFDVTYVELYLERVHDLL A   S                SP  +SP+SSPG  ALRVREHPK GPYVDGA STRV+SYEEV+ALLE GN NRMVAAT+LNATSSRSHA+FTIQYT+ K+EV                    +  V  QQTSKLSLIDLAGSE+AGKSGTKGERLKEGGSINKSLLTLGLVIK+LA T +H+         GG    G  + +VPYRDS LTFLLKDSLGGNSRTTMLATIRPGLAFYEE+L TLRYADRAKSIVNQAVVNEDP+T+KIRS+ DQI+ L  +LA AQ++E  KD E+ V+   L
Sbjct:   17 GDDHVTVAVRVKGVDALPEGP-DSLCVFPQENMA-NTGLYIDGQRGAVNNFQFDSIHWSLGGGVGPNGSSSSASHGSGGSIVVPESSQLSVFEDLGTPVVSSVLAGYNTCLFAYGQTGSGKTYTMMGKYDSIASEQRGLIPRISEALFAATATSKEVQKDPESGTTFGVESAAVEKFEVTHAFDVTYVELYLERVHDLLGAQASSPNTTTSGVSTNAGGIASPGTASPVSSPG-AALRVREHPKYGPYVDGAVSTRVNSYEEVLALLEIGNANRMVAATDLNATSSRSHAVFTIQYTKIKQEVD-----------------TPNPVVLSQQTSKLSLIDLAGSESAGKSGTKGERLKEGGSINKSLLTLGLVIKALA-TARHR---------GGSPVLGNGKPVVPYRDSVLTFLLKDSLGGNSRTTMLATIRPGLAFYEESLSTLRYADRAKSIVNQAVVNEDPLTKKIRSMQDQIEFLTLQLASAQEREAAKDTELFVMRQAL 491

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BLAST of NO06G00540 vs. NCBI_GenBank
Match: XP_700210.2 (kinesin-like protein KIF13B isoform X2 [Danio rerio])

HSP 1 Score: 296.6 bits (758), Expect = 1.600e-76
Identity = 193/485 (39.79%), Postives = 267/485 (55.05%), Query Frame = 0

Query:    1 MGDSNLSAGGDEWVTVAIRVKALDPLPDGELDSFCVAPL---QSKAKNTGLSIDGQKSGANAFHFDSVHWSLGKGNGGMDAQESTQEAMYEDLGAPVVTSVLAGFNACIFAYGQTGSGKTYTMMGNYDNIASADRGLIPRISEAIFRKAAAGGTSGSARNGKMITTVESTAAGSFEITHAFDVTYVELYLERVHDLLALPHSGXXXXXXXXXXXXXADSPSPSSPMSSPGQTALRVREHPKLGPYVDGATSTRVSSYEEVMALLETGNRNRMVAATELNATSSRSHAIFTIQYTRTKREVSPVSLRRGVGKGDGEGSAPADAAVSLQQTSKLSLIDLAGSENAGKSGTKGERLKEGGSINKSLLTLGLVIKSLAMTKQHQQREGWGSPGGGRGXXGEPRRLVPYRDSALTFLLKDSLGGNSRTTMLATIRPGLAFYEETLRTLRYADRAKSIVNQAVVNEDPITRKIRSLHDQIDVLAGRLAEAQ 483
            MGD+NL+   D  V VA+RV+ ++   + +L++ CV  +   Q+   +T L  D  +     F +D   WS+ +       + + Q+ +++ LG  ++ +   G+NACIFAYGQTGSGK+YTMMG+ D       GLIPR+  ++F +                T +      SF +    +V+Y+E+Y E+V DLL                           P  S  + ALRVREH  LGPYVDG +   V SY+++ +L+  GN++R VAAT +N  SSRSHA+F I  T T +++                     +  S ++ SKLSL+DLAGSE A K+G  GERLKEG +INKSL TLGLVI +LA                 +G      + VPYRDS LT+LLKDSLGGNSRT M+AT+ P    Y+ETL TLRYADRAKSIVN AVVNEDP  R IR L ++++ L  +L +A+
Sbjct:    1 MGDANLN---DSNVKVAVRVRPMN-RREKDLNTKCVVEMEGNQTFLYSTNLGKDSSRGQPKTFAYDYCFWSMDESE---TEKFAGQDVVFQCLGESLLHNAFQGYNACIFAYGQTGSGKSYTMMGSVD-----QPGLIPRLCSSLFER----------------TVLHQREEESFTV----EVSYMEIYNEKVRDLL--------------------------DPKGS--RQALRVREHKVLGPYVDGLSRLAVESYKDIESLMSEGNKSRTVAATNMNEESSRSHAVFNIILTHTLKDL--------------------QSGTSGEKVSKLSLVDLAGSERAAKTGAAGERLKEGSNINKSLTTLGLVISALA----------------DQGAGKNKNKFVPYRDSVLTWLLKDSLGGNSRTAMVATVSPAADNYDETLSTLRYADRAKSIVNHAVVNEDPNARIIRELREEVEKLRDQLTQAE 389

[Close]

BLAST of NO06G00540 vs. NCBI_GenBank
Match: XP_005169924.1 (kinesin-like protein KIF13B isoform X1 [Danio rerio])

HSP 1 Score: 296.6 bits (758), Expect = 1.600e-76
Identity = 193/485 (39.79%), Postives = 267/485 (55.05%), Query Frame = 0

Query:    1 MGDSNLSAGGDEWVTVAIRVKALDPLPDGELDSFCVAPL---QSKAKNTGLSIDGQKSGANAFHFDSVHWSLGKGNGGMDAQESTQEAMYEDLGAPVVTSVLAGFNACIFAYGQTGSGKTYTMMGNYDNIASADRGLIPRISEAIFRKAAAGGTSGSARNGKMITTVESTAAGSFEITHAFDVTYVELYLERVHDLLALPHSGXXXXXXXXXXXXXADSPSPSSPMSSPGQTALRVREHPKLGPYVDGATSTRVSSYEEVMALLETGNRNRMVAATELNATSSRSHAIFTIQYTRTKREVSPVSLRRGVGKGDGEGSAPADAAVSLQQTSKLSLIDLAGSENAGKSGTKGERLKEGGSINKSLLTLGLVIKSLAMTKQHQQREGWGSPGGGRGXXGEPRRLVPYRDSALTFLLKDSLGGNSRTTMLATIRPGLAFYEETLRTLRYADRAKSIVNQAVVNEDPITRKIRSLHDQIDVLAGRLAEAQ 483
            MGD+NL+   D  V VA+RV+ ++   + +L++ CV  +   Q+   +T L  D  +     F +D   WS+ +       + + Q+ +++ LG  ++ +   G+NACIFAYGQTGSGK+YTMMG+ D       GLIPR+  ++F +                T +      SF +    +V+Y+E+Y E+V DLL                           P  S  + ALRVREH  LGPYVDG +   V SY+++ +L+  GN++R VAAT +N  SSRSHA+F I  T T +++                     +  S ++ SKLSL+DLAGSE A K+G  GERLKEG +INKSL TLGLVI +LA                 +G      + VPYRDS LT+LLKDSLGGNSRT M+AT+ P    Y+ETL TLRYADRAKSIVN AVVNEDP  R IR L ++++ L  +L +A+
Sbjct:    1 MGDANLN---DSNVKVAVRVRPMN-RREKDLNTKCVVEMEGNQTFLYSTNLGKDSSRGQPKTFAYDYCFWSMDESE---TEKFAGQDVVFQCLGESLLHNAFQGYNACIFAYGQTGSGKSYTMMGSVD-----QPGLIPRLCSSLFER----------------TVLHQREEESFTV----EVSYMEIYNEKVRDLL--------------------------DPKGS--RQALRVREHKVLGPYVDGLSRLAVESYKDIESLMSEGNKSRTVAATNMNEESSRSHAVFNIILTHTLKDL--------------------QSGTSGEKVSKLSLVDLAGSERAAKTGAAGERLKEGSNINKSLTTLGLVISALA----------------DQGAGKNKNKFVPYRDSVLTWLLKDSLGGNSRTAMVATVSPAADNYDETLSTLRYADRAKSIVNHAVVNEDPNARIIRELREEVEKLRDQLTQAE 389

[Close]

BLAST of NO06G00540 vs. NCBI_GenBank
Match: XP_005169926.1 (kinesin-like protein KIF13B isoform X4 [Danio rerio])

HSP 1 Score: 296.6 bits (758), Expect = 1.600e-76
Identity = 193/485 (39.79%), Postives = 267/485 (55.05%), Query Frame = 0

Query:    1 MGDSNLSAGGDEWVTVAIRVKALDPLPDGELDSFCVAPL---QSKAKNTGLSIDGQKSGANAFHFDSVHWSLGKGNGGMDAQESTQEAMYEDLGAPVVTSVLAGFNACIFAYGQTGSGKTYTMMGNYDNIASADRGLIPRISEAIFRKAAAGGTSGSARNGKMITTVESTAAGSFEITHAFDVTYVELYLERVHDLLALPHSGXXXXXXXXXXXXXADSPSPSSPMSSPGQTALRVREHPKLGPYVDGATSTRVSSYEEVMALLETGNRNRMVAATELNATSSRSHAIFTIQYTRTKREVSPVSLRRGVGKGDGEGSAPADAAVSLQQTSKLSLIDLAGSENAGKSGTKGERLKEGGSINKSLLTLGLVIKSLAMTKQHQQREGWGSPGGGRGXXGEPRRLVPYRDSALTFLLKDSLGGNSRTTMLATIRPGLAFYEETLRTLRYADRAKSIVNQAVVNEDPITRKIRSLHDQIDVLAGRLAEAQ 483
            MGD+NL+   D  V VA+RV+ ++   + +L++ CV  +   Q+   +T L  D  +     F +D   WS+ +       + + Q+ +++ LG  ++ +   G+NACIFAYGQTGSGK+YTMMG+ D       GLIPR+  ++F +                T +      SF +    +V+Y+E+Y E+V DLL                           P  S  + ALRVREH  LGPYVDG +   V SY+++ +L+  GN++R VAAT +N  SSRSHA+F I  T T +++                     +  S ++ SKLSL+DLAGSE A K+G  GERLKEG +INKSL TLGLVI +LA                 +G      + VPYRDS LT+LLKDSLGGNSRT M+AT+ P    Y+ETL TLRYADRAKSIVN AVVNEDP  R IR L ++++ L  +L +A+
Sbjct:    1 MGDANLN---DSNVKVAVRVRPMN-RREKDLNTKCVVEMEGNQTFLYSTNLGKDSSRGQPKTFAYDYCFWSMDESE---TEKFAGQDVVFQCLGESLLHNAFQGYNACIFAYGQTGSGKSYTMMGSVD-----QPGLIPRLCSSLFER----------------TVLHQREEESFTV----EVSYMEIYNEKVRDLL--------------------------DPKGS--RQALRVREHKVLGPYVDGLSRLAVESYKDIESLMSEGNKSRTVAATNMNEESSRSHAVFNIILTHTLKDL--------------------QSGTSGEKVSKLSLVDLAGSERAAKTGAAGERLKEGSNINKSLTTLGLVISALA----------------DQGAGKNKNKFVPYRDSVLTWLLKDSLGGNSRTAMVATVSPAADNYDETLSTLRYADRAKSIVNHAVVNEDPNARIIRELREEVEKLRDQLTQAE 389

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BLAST of NO06G00540 vs. NCBI_GenBank
Match: XP_016332303.1 (PREDICTED: kinesin-like protein KIF13B [Sinocyclocheilus anshuiensis])

HSP 1 Score: 293.5 bits (750), Expect = 1.400e-75
Identity = 191/485 (39.38%), Postives = 265/485 (54.64%), Query Frame = 0

Query:    1 MGDSNLSAGGDEWVTVAIRVKALDPLPDGELDSFCVAPLQSKAKN---TGLSIDGQKSGANAFHFDSVHWSLGKGNGGMDAQESTQEAMYEDLGAPVVTSVLAGFNACIFAYGQTGSGKTYTMMGNYDNIASADRGLIPRISEAIFRKAAAGGTSGSARNGKMITTVESTAAGSFEITHAFDVTYVELYLERVHDLLALPHSGXXXXXXXXXXXXXADSPSPSSPMSSPGQTALRVREHPKLGPYVDGATSTRVSSYEEVMALLETGNRNRMVAATELNATSSRSHAIFTIQYTRTKREVSPVSLRRGVGKGDGEGSAPADAAVSLQQTSKLSLIDLAGSENAGKSGTKGERLKEGGSINKSLLTLGLVIKSLAMTKQHQQREGWGSPGGGRGXXGEPRRLVPYRDSALTFLLKDSLGGNSRTTMLATIRPGLAFYEETLRTLRYADRAKSIVNQAVVNEDPITRKIRSLHDQIDVLAGRLAEAQ 483
            MGD+NL+   D  V VA+RV+ ++   + +L++ CV  ++    +     L  D ++     F +D   WS+ +       + + Q+ +++ LG  ++ +   G+NACIFAYGQTGSGK+YTMMG+ D       GLIPR+  ++F +                T        SF +    +V+Y+E+Y E+V DLL                           P  S  + ALRVREH  LGPYVDG +   V SY+++ +L+  GN++R VAAT +N  SSRSHA+F I  T T +++                     +  S ++ SKLSL+DLAGSE A K+G  GERLKEG +INKSL TLGLVI +LA                 +G      + VPYRDS LT+LLKDSLGGNSRT M+AT+ P    Y+ETL TLRYADRAKSIVN AVVNEDP  R IR L ++++ L  +L +A+
Sbjct:    1 MGDANLN---DSNVKVALRVRPMN-RREKDLNTKCVVEMEGNQTHLYPANLGKDSRRGQPKTFAYDYCFWSMDESE---TEKFAGQDVVFQCLGESLLHNAFQGYNACIFAYGQTGSGKSYTMMGSVD-----QPGLIPRLCSSLFER----------------TVQHQREEESFTV----EVSYMEIYNEKVRDLL--------------------------DPKGS--RQALRVREHKVLGPYVDGLSRLAVESYKDIESLMSEGNKSRTVAATNMNEESSRSHAVFNIILTHTLKDL--------------------QSGTSGEKVSKLSLVDLAGSERAAKTGAAGERLKEGSNINKSLTTLGLVISALA----------------DQGAGKNKNKFVPYRDSVLTWLLKDSLGGNSRTAMVATVSPAADNYDETLSTLRYADRAKSIVNHAVVNEDPNARIIRELREEVEKLRDQLTQAE 389

[Close]

BLAST of NO06G00540 vs. NCBI_GenBank
Match: XP_016347852.1 (PREDICTED: kinesin-like protein KIF13B isoform X1 [Sinocyclocheilus anshuiensis] >XP_016347853.1 PREDICTED: kinesin-like protein KIF13B isoform X2 [Sinocyclocheilus anshuiensis])

HSP 1 Score: 292.7 bits (748), Expect = 2.300e-75
Identity = 197/495 (39.80%), Postives = 270/495 (54.55%), Query Frame = 0

Query:    1 MGDSNLSAGGDEWVTVAIRVKALDPLPDGELDSFCVAPL---QSKAKNTGLSIDGQKSGANAFHFDSVHWSLGKGNGGMDAQESTQEAMYEDLGAPVVTSVLAGFNACIFAYGQTGSGKTYTMMGNYDNIASADRGLIPRISEAIFRKAAAGGTSGSARNGKMITTVESTAAGSFEITHAFDVTYVELYLERVHDLLALPHSGXXXXXXXXXXXXXADSPSPSSPMSSPGQTALRVREHPKLGPYVDGATSTRVSSYEEVMALLETGNRNRMVAATELNATSSRSHAIFTIQYTRTKREVSPVSLRRGVGKGDGEGSAPADAAVSLQQTSKLSLIDLAGSENAGKSGTKGERLKEGGSINKSLLTLGLVIKSLAMTKQHQQREGWGSPGGGRGXXGEPRRLVPYRDSALTFLLKDSLGGNSRTTMLATIRPGLAFYEETLRTLRYADRAKSIVNQAVVNEDPITRKIRSLHDQIDVLAGRL--AEAQKKEEEKDQ 491
            MGD+NL+   D  V VA+RV+ ++   + +L++ CV  +   Q+      L  D  +     F +D   WS+ +       + + Q+ +++ LG  ++ +   G+NACIFAYGQTGSGK+YTMMG+ D       GLIPR+  ++F +                T  +     SF +    +V+Y+E+Y E+V DLL                           P  S  + ALRVREH  LGPYVDG +   V SY+++ +L+  GN++R VAAT +N  SSRSHA+F I  T T +++                     +  S ++ SKLSL+DLAGSE A K+G  GERLKEG +INKSL TLGLVI +LA                 +G      + VPYRDS LT+LLKDSLGGNSRT M+AT+ P    Y+ETL TLRYADRAKSIVN AVVNEDP  R IR L ++++ L  +L  AE+ K  E KD+
Sbjct:    1 MGDANLN---DSNVKVALRVRPMN-RREKDLNTKCVVEMEGNQTYLYPANLGKDSSRGQPKTFAYDYCFWSMDESE---TEKFAGQDVVFQCLGESLLHNAFQGYNACIFAYGQTGSGKSYTMMGSAD-----QPGLIPRLCSSLFER----------------TIQQQREEESFTV----EVSYMEIYNEKVRDLL--------------------------DPKGS--RQALRVREHKVLGPYVDGLSRLAVESYKDIESLMSEGNKSRTVAATNMNEESSRSHAVFNIILTHTLKDL--------------------QSGTSGEKVSKLSLVDLAGSERAAKTGAAGERLKEGSNINKSLTTLGLVISALA----------------DQGAGKNKNKFVPYRDSVLTWLLKDSLGGNSRTAMVATVSPAADNYDETLSTLRYADRAKSIVNHAVVNEDPNARIIRELREEVEKLRDQLTQAESMKAPELKDR 399

[Close]

BLAST of NO06G00540 vs. NCBI_GenBank
Match: XP_016347854.1 (PREDICTED: kinesin-like protein KIF13B isoform X3 [Sinocyclocheilus anshuiensis])

HSP 1 Score: 292.7 bits (748), Expect = 2.300e-75
Identity = 197/495 (39.80%), Postives = 270/495 (54.55%), Query Frame = 0

Query:    1 MGDSNLSAGGDEWVTVAIRVKALDPLPDGELDSFCVAPL---QSKAKNTGLSIDGQKSGANAFHFDSVHWSLGKGNGGMDAQESTQEAMYEDLGAPVVTSVLAGFNACIFAYGQTGSGKTYTMMGNYDNIASADRGLIPRISEAIFRKAAAGGTSGSARNGKMITTVESTAAGSFEITHAFDVTYVELYLERVHDLLALPHSGXXXXXXXXXXXXXADSPSPSSPMSSPGQTALRVREHPKLGPYVDGATSTRVSSYEEVMALLETGNRNRMVAATELNATSSRSHAIFTIQYTRTKREVSPVSLRRGVGKGDGEGSAPADAAVSLQQTSKLSLIDLAGSENAGKSGTKGERLKEGGSINKSLLTLGLVIKSLAMTKQHQQREGWGSPGGGRGXXGEPRRLVPYRDSALTFLLKDSLGGNSRTTMLATIRPGLAFYEETLRTLRYADRAKSIVNQAVVNEDPITRKIRSLHDQIDVLAGRL--AEAQKKEEEKDQ 491
            MGD+NL+   D  V VA+RV+ ++   + +L++ CV  +   Q+      L  D  +     F +D   WS+ +       + + Q+ +++ LG  ++ +   G+NACIFAYGQTGSGK+YTMMG+ D       GLIPR+  ++F +                T  +     SF +    +V+Y+E+Y E+V DLL                           P  S  + ALRVREH  LGPYVDG +   V SY+++ +L+  GN++R VAAT +N  SSRSHA+F I  T T +++                     +  S ++ SKLSL+DLAGSE A K+G  GERLKEG +INKSL TLGLVI +LA                 +G      + VPYRDS LT+LLKDSLGGNSRT M+AT+ P    Y+ETL TLRYADRAKSIVN AVVNEDP  R IR L ++++ L  +L  AE+ K  E KD+
Sbjct:    1 MGDANLN---DSNVKVALRVRPMN-RREKDLNTKCVVEMEGNQTYLYPANLGKDSSRGQPKTFAYDYCFWSMDESE---TEKFAGQDVVFQCLGESLLHNAFQGYNACIFAYGQTGSGKSYTMMGSAD-----QPGLIPRLCSSLFER----------------TIQQQREEESFTV----EVSYMEIYNEKVRDLL--------------------------DPKGS--RQALRVREHKVLGPYVDGLSRLAVESYKDIESLMSEGNKSRTVAATNMNEESSRSHAVFNIILTHTLKDL--------------------QSGTSGEKVSKLSLVDLAGSERAAKTGAAGERLKEGSNINKSLTTLGLVISALA----------------DQGAGKNKNKFVPYRDSVLTWLLKDSLGGNSRTAMVATVSPAADNYDETLSTLRYADRAKSIVNHAVVNEDPNARIIRELREEVEKLRDQLTQAESMKAPELKDR 399

[Close]

BLAST of NO06G00540 vs. NCBI_GenBank
Match: XP_016347856.1 (PREDICTED: kinesin-like protein KIF13B isoform X5 [Sinocyclocheilus anshuiensis])

HSP 1 Score: 292.7 bits (748), Expect = 2.300e-75
Identity = 197/495 (39.80%), Postives = 270/495 (54.55%), Query Frame = 0

Query:    1 MGDSNLSAGGDEWVTVAIRVKALDPLPDGELDSFCVAPL---QSKAKNTGLSIDGQKSGANAFHFDSVHWSLGKGNGGMDAQESTQEAMYEDLGAPVVTSVLAGFNACIFAYGQTGSGKTYTMMGNYDNIASADRGLIPRISEAIFRKAAAGGTSGSARNGKMITTVESTAAGSFEITHAFDVTYVELYLERVHDLLALPHSGXXXXXXXXXXXXXADSPSPSSPMSSPGQTALRVREHPKLGPYVDGATSTRVSSYEEVMALLETGNRNRMVAATELNATSSRSHAIFTIQYTRTKREVSPVSLRRGVGKGDGEGSAPADAAVSLQQTSKLSLIDLAGSENAGKSGTKGERLKEGGSINKSLLTLGLVIKSLAMTKQHQQREGWGSPGGGRGXXGEPRRLVPYRDSALTFLLKDSLGGNSRTTMLATIRPGLAFYEETLRTLRYADRAKSIVNQAVVNEDPITRKIRSLHDQIDVLAGRL--AEAQKKEEEKDQ 491
            MGD+NL+   D  V VA+RV+ ++   + +L++ CV  +   Q+      L  D  +     F +D   WS+ +       + + Q+ +++ LG  ++ +   G+NACIFAYGQTGSGK+YTMMG+ D       GLIPR+  ++F +                T  +     SF +    +V+Y+E+Y E+V DLL                           P  S  + ALRVREH  LGPYVDG +   V SY+++ +L+  GN++R VAAT +N  SSRSHA+F I  T T +++                     +  S ++ SKLSL+DLAGSE A K+G  GERLKEG +INKSL TLGLVI +LA                 +G      + VPYRDS LT+LLKDSLGGNSRT M+AT+ P    Y+ETL TLRYADRAKSIVN AVVNEDP  R IR L ++++ L  +L  AE+ K  E KD+
Sbjct:    1 MGDANLN---DSNVKVALRVRPMN-RREKDLNTKCVVEMEGNQTYLYPANLGKDSSRGQPKTFAYDYCFWSMDESE---TEKFAGQDVVFQCLGESLLHNAFQGYNACIFAYGQTGSGKSYTMMGSAD-----QPGLIPRLCSSLFER----------------TIQQQREEESFTV----EVSYMEIYNEKVRDLL--------------------------DPKGS--RQALRVREHKVLGPYVDGLSRLAVESYKDIESLMSEGNKSRTVAATNMNEESSRSHAVFNIILTHTLKDL--------------------QSGTSGEKVSKLSLVDLAGSERAAKTGAAGERLKEGSNINKSLTTLGLVISALA----------------DQGAGKNKNKFVPYRDSVLTWLLKDSLGGNSRTAMVATVSPAADNYDETLSTLRYADRAKSIVNHAVVNEDPNARIIRELREEVEKLRDQLTQAESMKAPELKDR 399

[Close]

BLAST of NO06G00540 vs. NCBI_GenBank
Match: XP_017207283.1 (kinesin-like protein KIF13B isoform X3 [Danio rerio])

HSP 1 Score: 292.7 bits (748), Expect = 2.300e-75
Identity = 193/487 (39.63%), Postives = 266/487 (54.62%), Query Frame = 0

Query:    1 MGDSNLSAGGDEWVTVAIRVKALDPLPDGELDSFCVAPLQSK-----AKNTGLSIDGQKSGANAFHFDSVHWSLGKGNGGMDAQESTQEAMYEDLGAPVVTSVLAGFNACIFAYGQTGSGKTYTMMGNYDNIASADRGLIPRISEAIFRKAAAGGTSGSARNGKMITTVESTAAGSFEITHAFDVTYVELYLERVHDLLALPHSGXXXXXXXXXXXXXADSPSPSSPMSSPGQTALRVREHPKLGPYVDGATSTRVSSYEEVMALLETGNRNRMVAATELNATSSRSHAIFTIQYTRTKREVSPVSLRRGVGKGDGEGSAPADAAVSLQQTSKLSLIDLAGSENAGKSGTKGERLKEGGSINKSLLTLGLVIKSLAMTKQHQQREGWGSPGGGRGXXGEPRRLVPYRDSALTFLLKDSLGGNSRTTMLATIRPGLAFYEETLRTLRYADRAKSIVNQAVVNEDPITRKIRSLHDQIDVLAGRLAEAQ 483
            MGD+NL+   D  V VA+RV+ ++   + +L++ CV  ++       + N G    GQ      F +D   WS+ +       + + Q+ +++ LG  ++ +   G+NACIFAYGQTGSGK+YTMMG+ D       GLIPR+  ++F +                T +      SF +    +V+Y+E+Y E+V DLL                           P  S  + ALRVREH  LGPYVDG +   V SY+++ +L+  GN++R VAAT +N  SSRSHA+F I  T T +++                     +  S ++ SKLSL+DLAGSE A K+G  GERLKEG +INKSL TLGLVI +LA                 +G      + VPYRDS LT+LLKDSLGGNSRT M+AT+ P    Y+ETL TLRYADRAKSIVN AVVNEDP  R IR L ++++ L  +L +A+
Sbjct:    1 MGDANLN---DSNVKVAVRVRPMN-RREKDLNTKCVVEMEGNQTFLYSTNLGKDSRGQ---PKTFAYDYCFWSMDESE---TEKFAGQDVVFQCLGESLLHNAFQGYNACIFAYGQTGSGKSYTMMGSVD-----QPGLIPRLCSSLFER----------------TVLHQREEESFTV----EVSYMEIYNEKVRDLL--------------------------DPKGS--RQALRVREHKVLGPYVDGLSRLAVESYKDIESLMSEGNKSRTVAATNMNEESSRSHAVFNIILTHTLKDL--------------------QSGTSGEKVSKLSLVDLAGSERAAKTGAAGERLKEGSNINKSLTTLGLVISALA----------------DQGAGKNKNKFVPYRDSVLTWLLKDSLGGNSRTAMVATVSPAADNYDETLSTLRYADRAKSIVNHAVVNEDPNARIIRELREEVEKLRDQLTQAE 388

[Close]

BLAST of NO06G00540 vs. NCBI_GenBank
Match: XP_016428174.1 (PREDICTED: kinesin-like protein KIF13B isoform X1 [Sinocyclocheilus rhinocerous])

HSP 1 Score: 292.0 bits (746), Expect = 4.000e-75
Identity = 192/485 (39.59%), Postives = 264/485 (54.43%), Query Frame = 0

Query:    1 MGDSNLSAGGDEWVTVAIRVKALDPLPDGELDSFCVAPL---QSKAKNTGLSIDGQKSGANAFHFDSVHWSLGKGNGGMDAQESTQEAMYEDLGAPVVTSVLAGFNACIFAYGQTGSGKTYTMMGNYDNIASADRGLIPRISEAIFRKAAAGGTSGSARNGKMITTVESTAAGSFEITHAFDVTYVELYLERVHDLLALPHSGXXXXXXXXXXXXXADSPSPSSPMSSPGQTALRVREHPKLGPYVDGATSTRVSSYEEVMALLETGNRNRMVAATELNATSSRSHAIFTIQYTRTKREVSPVSLRRGVGKGDGEGSAPADAAVSLQQTSKLSLIDLAGSENAGKSGTKGERLKEGGSINKSLLTLGLVIKSLAMTKQHQQREGWGSPGGGRGXXGEPRRLVPYRDSALTFLLKDSLGGNSRTTMLATIRPGLAFYEETLRTLRYADRAKSIVNQAVVNEDPITRKIRSLHDQIDVLAGRLAEAQ 483
            MGD+NL+   D  V VA+RV+ ++   + +L++ CV  +   Q+      L  D  +     F +D   WS+ +       + + Q+ +++ LG  ++ +   G+NACIFAYGQTGSGK+YTMMG+ D       GLIPR+  ++F +                T        SF +    +V+Y+E+Y E+V DLL                           P  S  + ALRVREH  LGPYVDG +   V SY+++ +L+  GN++R VAAT +N  SSRSHA+F I  T T +++                     +  S ++ SKLSL+DLAGSE A K+G  GERLKEG +INKSL TLGLVI +LA                 +G      + VPYRDS LT+LLKDSLGGNSRT M+AT+ P    Y+ETL TLRYADRAKSIVN AVVNEDP  R IR L ++++ L  +L +A+
Sbjct:    1 MGDANLN---DSNVKVAVRVRPMN-RREKDLNTKCVVEMEGNQTYLYPANLGKDSSRGQPKTFAYDYCFWSMDESE---TEKFAGQDVVFQCLGESLLHNAFQGYNACIFAYGQTGSGKSYTMMGSAD-----QPGLIPRLCSSLFER----------------TIQHQREEESFTV----EVSYMEIYNEKVRDLL--------------------------DPKGS--RQALRVREHKVLGPYVDGLSRLAVESYKDIESLMSEGNKSRTVAATNMNEESSRSHAVFNIILTHTLKDL--------------------QSGTSGEKVSKLSLVDLAGSERAAKTGAAGERLKEGSNINKSLTTLGLVISALA----------------DQGAGKNKNKFVPYRDSVLTWLLKDSLGGNSRTAMVATVSPSADNYDETLSTLRYADRAKSIVNHAVVNEDPNARIIRELREEVEKLRDQLTQAE 389

The following BLAST results are available for this feature:

BLAST of NO06G00540 vs. NCBI_GenBank

BLAST of NO06G00540 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM26127.1	1.200e-148	61.58	kinesin-like protein kif13a [Nannochloropsis gadit...	[more]
XP_700210.2	1.600e-76	39.79	kinesin-like protein KIF13B isoform X2 [Danio reri...	[more]
XP_005169924.1	1.600e-76	39.79	kinesin-like protein KIF13B isoform X1 [Danio reri...	[more]
XP_005169926.1	1.600e-76	39.79	kinesin-like protein KIF13B isoform X4 [Danio reri...	[more]
XP_016332303.1	1.400e-75	39.38	PREDICTED: kinesin-like protein KIF13B [Sinocycloc...	[more]
XP_016347852.1	2.300e-75	39.80	PREDICTED: kinesin-like protein KIF13B isoform X1 ...	[more]
XP_016347854.1	2.300e-75	39.80	PREDICTED: kinesin-like protein KIF13B isoform X3 ...	[more]
XP_016347856.1	2.300e-75	39.80	PREDICTED: kinesin-like protein KIF13B isoform X5 ...	[more]
XP_017207283.1	2.300e-75	39.63	kinesin-like protein KIF13B isoform X3 [Danio reri...	[more]
XP_016428174.1	4.000e-75	39.59	PREDICTED: kinesin-like protein KIF13B isoform X1 ...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL091	nonsL091	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR147	ngnoR147	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK000395	NSK000395	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO06G00540.1	NO06G00540.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
Naga_100014g69	gene4429	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO06G00540.1	NO06G00540.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO06G00540 ID=NO06G00540|Name=NO06G00540|organism=Nannochloropsis oceanica|type=gene|length=2357bp
ATGGGGGACTCCAATTTATCGGCTGGCGGCGACGAGTGGGTCACAGgtca
gtagaacccttgtgaatatttgtgacaggataggatgggcagcttttctt
ccaatcgtcctctcaatttgtcccagtcacttgtgttttttcctgccgtt
atatcatccttggccttaccccctcctccttccctttcgcgctttcaccg
catgtctacggtgcactgattttatctcttcttctctttacacctgcccc
ccccattgtacttgctatgccattacatatcacaatttctacactaccta
ctccctccagTCGCCATCCGTGTCAAGGCCCTGGACCCCCTCCCAGACGG
AGAGCTCGACAGTTTCTGCGTCGCTCCTCTTCAGAGCAAGGCGAAAAATA
CCGGCCTATCCATTGACGGTCAAAAAAGCGGAGCCAATGCTTTCCACTTT
GACTCGGTGCACTGGTCACTCGGCAAGGGAAACGGTGGAATGGACGCCCA
GGAATCAACCCAAGAGGCCATGTATGAGGACCTCGGTGCCCCGGTTGTTA
CCTCTGTTCTCGCCGGCTTCAACGCTTGTATCTTCGCGTACGGTCAGACG
GGCAGgtgggtagattggagcctcgaggaggggagggagtgcaagagcga
cgttgtagaaagtgtgggaatgcgtcccgacctttgcctcattcctcccc
tcgtcttcccccctccctcacatgcagTGGCAAGACCTACACCATGATGG
GGAATTACGACAACATCGCCAGTGCAGACCGCGGACTTATCCCTCGAATC
AGCGAAGCCATCTTTAGAAAAGCTGCCGCCGGGGGTACGTCCGGGTCCGC
GCGTAACGGCAAAATGATAACGACGGTCGAGTCCACGGCAGCGGGAAGCT
TCGAAATCACCCATGCATTCGATGTTACCTATGTGGAATTGTATCTGGAG
CGGGTGCATGACTTGCTCGCTCTCCCACACAGCGGAAGCAGCTGCTGCAG
CAGCAGCAGTAGCTCGGGAGGGAGGGCAGACTCCCCCTCTCCATCCTCGC
CCATGTCGTCGCCGGGGCAGACGGCGCTGCGGGTGAGGGAACATCCAAAG
CTGGGGCCGTATGTAGACGGAGCGACGAGCACACGGGTGTCGTCTTATGA
GGAGGTGATGGCGCTGTTAGAGACGGGGAATCGGAACAGGATGGTGGCGG
CCACGGAGCTGAACGCGACGAGCTCAAGGAGTCACGCAATATTCACCATC
CAGTACACCAGGACCAAGAGGGAGGTGTCCCCCGTGTCTCTAAGACGAGG
AGTGGGGAAAGGGGATGGCGAGGGCAGCGCCCCTGCAGATGCGGCGGTGA
GTCTGCAGCAGACTTCGAAGTTGAGCTTGATCGACCTGGCGGGCAGTGAG
AATGCGGGCAAGTCGGGGACGAAGGGGGAGAGGCTGAAGGAGGGTGGGAG
CATCAACAAGAGTCTGCTCACCCTTGGCTTGGTAATCAAGTCGCTGGCCA
TGACGAAACAGCACCAGCAGCGAGAAGGATGGGGAAGCCCGGGGGGAGGA
AGGGGGGGAGGGGGGGAACCCCGGAGGCTGGTGCCGTACCGGGACTCAGC
TCTGACGTTTTTATTGAAGGATTCACTAGGCGGGAACAGCCGGACAACGA
TGCTGgtaggtaggattgggggaaggagagtgagagggagggagggaaga
aggcatacttatgtgtttcgcttgcttagtgtgtcgagtgatcctgtttg
tgtgcatgcatgtctgtacgccgtggatcttgctcccttccgtccccatc
gccggcgatgacgatcggcccgggtccccttcacattcaaggggacattt
cgcatcctgcgctaccctcatcgtctcaagagcatggcaatgaccgcagg
tttaaacttataccccctcctcccactttccctcccttcctccctccctc
cctgccccccccgtaagGCCACCATCCGACCCGGCCTGGCTTTCTATGAA
GAAACTCTCCGCACGCTGCGCTACGCTGATCGCGCCAAGAGCATCGTCAA
CCAGGCCGTGGTGAATGAAGACCCTATTACCAGGAAGATCCGATCACTCC
ATGACCAGATTGACGTCTTGGCCGGACGACTGGCCGAGGCCCAGAAGAAG
GAAGAGGAGAAGGATCAAGAGATACAGGTGCTGTCGGATCAGCTGCGGCG
GGCATTGGCAGGAGGAGGGAGAGGAGGGGGGGAAGGAAGGAGGGGAGGAA
GGAGGCACAGGATAGTGCAACGGGAGCAGGGGAGGAGGACGAAGGGGAGA
AAGGAGACGAGGAAAAGAAGCGGGGACAAGGAGATTCGCAGGAAGACGCT
AGATTAA

protein sequence of NO06G00540.1

>NO06G00540.1-protein ID=NO06G00540.1-protein|Name=NO06G00540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=553bp
MGDSNLSAGGDEWVTVAIRVKALDPLPDGELDSFCVAPLQSKAKNTGLSI
DGQKSGANAFHFDSVHWSLGKGNGGMDAQESTQEAMYEDLGAPVVTSVLA
GFNACIFAYGQTGSGKTYTMMGNYDNIASADRGLIPRISEAIFRKAAAGG
TSGSARNGKMITTVESTAAGSFEITHAFDVTYVELYLERVHDLLALPHSG
SSCCSSSSSSGGRADSPSPSSPMSSPGQTALRVREHPKLGPYVDGATSTR
VSSYEEVMALLETGNRNRMVAATELNATSSRSHAIFTIQYTRTKREVSPV
SLRRGVGKGDGEGSAPADAAVSLQQTSKLSLIDLAGSENAGKSGTKGERL
KEGGSINKSLLTLGLVIKSLAMTKQHQQREGWGSPGGGRGGGGEPRRLVP
YRDSALTFLLKDSLGGNSRTTMLATIRPGLAFYEETLRTLRYADRAKSIV
NQAVVNEDPITRKIRSLHDQIDVLAGRLAEAQKKEEEKDQEIQVLSDQLR
RALAGGGRGGGEGRRGGRRHRIVQREQGRRTKGRKETRKRSGDKEIRRKT
LD*

Synonyms

Publications