NO06G00450, NO06G00450 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G00450 vs. NCBI_GenBank
Match: XP_005856348.1 (hypothetical protein NGA_2018700, partial [Nannochloropsis gaditana CCMP526] >EKU20004.1 hypothetical protein NGA_2018700, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 155.2 bits (391), Expect = 1.200e-33 Identity = 97/228 (42.54%), Postives = 115/228 (50.44%), Query Frame = 0 Query: 339 KWTLEEEEFTARIIHYFNQGLLILPPSLTLRAYISHKLRCDPMRVTKKFTGACYIGKRTASVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQV-EGGREEEIEGARQELERLEKRFWATLERSEESYSYRNGMLGLGWGFEYLMMGAGRGRRAEGGQGHGQMQWNPAWLAAYQQ 566 KWT+EEEE+TAR+I+YFN+GLL LP TLRAYISHKL+CDPMRVTKKFTGAC IGK+ S G+V +G E++ A++ELERLEKRFW TLE+SEE Y YRNG+LGLGWGF+ +M+ GRG AE Q Q WNP LAAYQQ Sbjct: 295 KWTVEEEEYTARLIYYFNRGLLQLPEGQTLRAYISHKLKCDPMRVTKKFTGACCIGKKAFS-----------------------------------------------------------------------GAQQALQPHLQRGEVGQGVAPEDVNRAKEELERLEKRFWTTLEQSEEGYCYRNGVLGLGWGFDCMML--GRGGEAEMAQ---QQSWNPILLAAYQQ 446
BLAST of NO06G00450 vs. NCBI_GenBank
Match: EWM26137.1 (hypothetical protein Naga_100014g82 [Nannochloropsis gaditana]) HSP 1 Score: 155.2 bits (391), Expect = 1.200e-33 Identity = 97/228 (42.54%), Postives = 115/228 (50.44%), Query Frame = 0 Query: 339 KWTLEEEEFTARIIHYFNQGLLILPPSLTLRAYISHKLRCDPMRVTKKFTGACYIGKRTASVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQV-EGGREEEIEGARQELERLEKRFWATLERSEESYSYRNGMLGLGWGFEYLMMGAGRGRRAEGGQGHGQMQWNPAWLAAYQQ 566 KWT+EEEE+TAR+I+YFN+GLL LP TLRAYISHKL+CDPMRVTKKFTGAC IGK+ S G+V +G E++ A++ELERLEKRFW TLE+SEE Y YRNG+LGLGWGF+ +M+ GRG AE Q Q WNP LAAYQQ Sbjct: 395 KWTVEEEEYTARLIYYFNRGLLQLPEGQTLRAYISHKLKCDPMRVTKKFTGACCIGKKAFS-----------------------------------------------------------------------GAQQALQPHLQRGEVGQGVAPEDVNRAKEELERLEKRFWTTLEQSEEGYCYRNGVLGLGWGFDCMML--GRGGEAEMAQ---QQSWNPILLAAYQQ 546
BLAST of NO06G00450 vs. NCBI_GenBank
Match: OEU05753.1 (hypothetical protein FRACYDRAFT_258386 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 92.4 bits (228), Expect = 9.700e-15 Identity = 39/58 (67.24%), Postives = 49/58 (84.48%), Query Frame = 0 Query: 339 KWTLEEEEFTARIIHYFNQGLLILPPSLTLRAYISHKLRCDPMRVTKKFTGACYIGKR 397 KWT+EEEE+T+RII YF+ GLL LP TLR+Y++ KL CDPMR+TKKFTGAC +G+R Sbjct: 60 KWTIEEEEYTSRIIQYFSTGLLTLPDGATLRSYLADKLNCDPMRITKKFTGACCLGRR 117
BLAST of NO06G00450 vs. NCBI_GenBank
Match: XP_002294748.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED88108.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 90.5 bits (223), Expect = 3.700e-14 Identity = 38/58 (65.52%), Postives = 47/58 (81.03%), Query Frame = 0 Query: 339 KWTLEEEEFTARIIHYFNQGLLILPPSLTLRAYISHKLRCDPMRVTKKFTGACYIGKR 397 KWT+EEEEFT R+IHYF+ GL+ LP TLR Y+S KL+CDPMR+TKK+ GA +GKR Sbjct: 144 KWTVEEEEFTTRVIHYFSSGLMTLPEGKTLRGYLSEKLQCDPMRITKKYAGASCLGKR 201
BLAST of NO06G00450 vs. NCBI_GenBank
Match: EWM26332.1 (hypothetical protein Naga_100078g19 [Nannochloropsis gaditana]) HSP 1 Score: 89.7 bits (221), Expect = 6.300e-14 Identity = 40/58 (68.97%), Postives = 47/58 (81.03%), Query Frame = 0 Query: 339 KWTLEEEEFTARIIHYFNQGLLILPPSLTLRAYISHKLRCDPMRVTKKFTGACYIGKR 397 KWT EEEEFT R+I YFN GLL LP TLRAY++ KL+CDPMR+TKKFTGA +G+R Sbjct: 13 KWTSEEEEFTQRMIEYFNTGLLPLPNGTTLRAYLAEKLKCDPMRITKKFTGAACLGRR 70
BLAST of NO06G00450 vs. NCBI_GenBank
Match: GAX20270.1 (hypothetical protein FisN_6Hh221 [Fistulifera solaris]) HSP 1 Score: 89.4 bits (220), Expect = 8.200e-14 Identity = 38/58 (65.52%), Postives = 48/58 (82.76%), Query Frame = 0 Query: 339 KWTLEEEEFTARIIHYFNQGLLILPPSLTLRAYISHKLRCDPMRVTKKFTGACYIGKR 397 KWT EEEE+T+RIIHYF+ GLLILP TLR+Y++ KL CDPMR+TKK+ GA +G+R Sbjct: 137 KWTPEEEEYTSRIIHYFSTGLLILPEGYTLRSYLAEKLNCDPMRITKKYAGAACLGRR 194
BLAST of NO06G00450 vs. NCBI_GenBank
Match: GAX09406.1 (hypothetical protein FisN_6Lh221 [Fistulifera solaris]) HSP 1 Score: 88.6 bits (218), Expect = 1.400e-13 Identity = 38/58 (65.52%), Postives = 48/58 (82.76%), Query Frame = 0 Query: 339 KWTLEEEEFTARIIHYFNQGLLILPPSLTLRAYISHKLRCDPMRVTKKFTGACYIGKR 397 KWT EEEE+T+RIIHYF+ GLLILP TLR+Y++ KL CDPMR+TKK+ GA +G+R Sbjct: 100 KWTPEEEEYTSRIIHYFSTGLLILPEGHTLRSYLAEKLNCDPMRITKKYAGAACLGRR 157
BLAST of NO06G00450 vs. NCBI_GenBank
Match: CBJ29954.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 85.1 bits (209), Expect = 1.500e-12 Identity = 39/58 (67.24%), Postives = 45/58 (77.59%), Query Frame = 0 Query: 339 KWTLEEEEFTARIIHYFNQGLLILPPSLTLRAYISHKLRCDPMRVTKKFTGACYIGKR 397 KWT EEE TARIIHYF+ G+L LP TLRAY++ KL CDPMR+TKKFTG +GKR Sbjct: 12 KWTSEEEALTARIIHYFSLGVLQLPDGTTLRAYLAQKLDCDPMRITKKFTGTNCLGKR 69
BLAST of NO06G00450 vs. NCBI_GenBank
Match: XP_009043471.1 (hypothetical protein AURANDRAFT_69453, partial [Aureococcus anophagefferens] >EGB01830.1 hypothetical protein AURANDRAFT_69453, partial [Aureococcus anophagefferens]) HSP 1 Score: 84.7 bits (208), Expect = 2.000e-12 Identity = 38/58 (65.52%), Postives = 45/58 (77.59%), Query Frame = 0 Query: 339 KWTLEEEEFTARIIHYFNQGLLILPPSLTLRAYISHKLRCDPMRVTKKFTGACYIGKR 397 KWT+EE EFT RII FN GLL LP TLR+Y++ KL CDPMR+TKKF+GA +GKR Sbjct: 36 KWTIEETEFTTRIIELFNTGLLELPEGATLRSYLAQKLSCDPMRITKKFSGASCLGKR 93
BLAST of NO06G00450 vs. NCBI_GenBank
Match: CBN74989.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 82.4 bits (202), Expect = 1.000e-11 Identity = 38/58 (65.52%), Postives = 45/58 (77.59%), Query Frame = 0 Query: 339 KWTLEEEEFTARIIHYFNQGLLILPPSLTLRAYISHKLRCDPMRVTKKFTGACYIGKR 397 KWT EEE +T +II+ FN+GLL L P TLR+Y+S KL CDPMR+TKKF GA IGKR Sbjct: 257 KWTPEEEVYTTKIINDFNKGLLPLAPGTTLRSYLSEKLNCDPMRITKKFAGASCIGKR 314 The following BLAST results are available for this feature:
BLAST of NO06G00450 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G00450 ID=NO06G00450|Name=NO06G00450|organism=Nannochloropsis oceanica|type=gene|length=3599bpback to top protein sequence of NO06G00450.1 >NO06G00450.1-protein ID=NO06G00450.1-protein|Name=NO06G00450.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1162bpback to top Synonyms
Publications
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