NO06G00400, NO06G00400 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G00400 vs. NCBI_GenBank
Match: EWM26071.1 (hypothetical protein Naga_100278g4 [Nannochloropsis gaditana]) HSP 1 Score: 724.9 bits (1870), Expect = 1.800e-205 Identity = 352/440 (80.00%), Postives = 393/440 (89.32%), Query Frame = 0 Query: 59 LARRLFQIQDRSLTVLRVLFVIGIPLTIINISFACAYAWLFANQYAYTKDDWQRCLIYPNQGVDVFGNHAEDKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYALFTNMMALLGIIVYREAEPIQPQPQQLSATLLTLIKYIHPHMYDFPDATAKWAPSSCAPAYHLNKWFLIFQIMVVVLVASIFVVVATCAVANYKEGKRWRFQLQGNAYPLGLLVVAFAGYVTCFYAKETVAQLTLDVLSDSNMDNFFVFSKGELDIVSLTMMMTLGAIGVGTCKGDLEKFKLGAFISYIHVVLSYPSILATFHGFNGVTYPFNKDKSLATSFDIWSMDSATGCPAYISTRSSIFARDQGAAHKLCRMCHLSLVGQLIQFCAQHLVVVACLYILYANRDLPAQRLRLGTYVPDYLGGVHVNVSVHKPIAGFRRNHSRFVV 499 LARR FQIQDRSLT LR+LFV+GIPLTIINISFAC YAW+FANQY+YTKDDWQRCL+YPNQ VD G DKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPY+LF N+MA+LGIIVYREAEPIQPQPQQLSATLLTL+KYI P+MY FP A AKWAP+SC+ AY LNKWFLIFQI+VVVL+ SIF+V++TCAVANY+ GKRWRFQL+ N YPLGLLV+AF GYVTCFYAKETVAQLTLDVL++S +++ F FSKGELDIVSLTMMMTLGAIGVGTCKGDLEKFKLGAFISYIHVVLSYPS+LAT H +N VTYP+NKDKSLA +F IWS+D A GCPAY++ +S+IF R A LCRMCHLSL+GQLIQF AQHLVV+ACLYILYANRDLPAQRLRLGTY+PDYLGG+ VNVSV+ PI G++RN SR V Sbjct: 50 LARRYFQIQDRSLTALRILFVVGIPLTIINISFACVYAWIFANQYSYTKDDWQRCLVYPNQAVDPLGGSTADKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYSLFANVMAILGIIVYREAEPIQPQPQQLSATLLTLVKYIQPNMYSFP-AAAKWAPASCSLAYALNKWFLIFQILVVVLMCSIFLVISTCAVANYRIGKRWRFQLEANGYPLGLLVIAFVGYVTCFYAKETVAQLTLDVLNESKLNSIFAFSKGELDIVSLTMMMTLGAIGVGTCKGDLEKFKLGAFISYIHVVLSYPSVLATIHAYNSVTYPYNKDKSLAQAFSIWSLDPAYGCPAYVTAKSAIFERFPKEAETLCRMCHLSLIGQLIQFGAQHLVVIACLYILYANRDLPAQRLRLGTYIPDYLGGLQVNVSVNAPIEGYKRNSSRVAV 488
BLAST of NO06G00400 vs. NCBI_GenBank
Match: EWM26072.1 (hypothetical protein Naga_100278g4 [Nannochloropsis gaditana]) HSP 1 Score: 597.8 bits (1540), Expect = 3.400e-167 Identity = 289/357 (80.95%), Postives = 323/357 (90.48%), Query Frame = 0 Query: 59 LARRLFQIQDRSLTVLRVLFVIGIPLTIINISFACAYAWLFANQYAYTKDDWQRCLIYPNQGVDVFGNHAEDKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYALFTNMMALLGIIVYREAEPIQPQPQQLSATLLTLIKYIHPHMYDFPDATAKWAPSSCAPAYHLNKWFLIFQIMVVVLVASIFVVVATCAVANYKEGKRWRFQLQGNAYPLGLLVVAFAGYVTCFYAKETVAQLTLDVLSDSNMDNFFVFSKGELDIVSLTMMMTLGAIGVGTCKGDLEKFKLGAFISYIHVVLSYPSILATFHGFNGVTYPFNKDKSLATSFDIWSMDSATGCPAYISTRSSIFAR 416 LARR FQIQDRSLT LR+LFV+GIPLTIINISFAC YAW+FANQY+YTKDDWQRCL+YPNQ VD G DKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPY+LF N+MA+LGIIVYREAEPIQPQPQQLSATLLTL+KYI P+MY FP A AKWAP+SC+ AY LNKWFLIFQI+VVVL+ SIF+V++TCAVANY+ GKRWRFQL+ N YPLGLLV+AF GYVTCFYAKETVAQLTLDVL++S +++ F FSKGELDIVSLTMMMTLGAIGVGTCKGDLEKFKLGAFISYIHVVLSYPS+LAT H +N VTYP+NKDKSLA +F IWS+D A GCPAY++ +S+IF R Sbjct: 50 LARRYFQIQDRSLTALRILFVVGIPLTIINISFACVYAWIFANQYSYTKDDWQRCLVYPNQAVDPLGGSTADKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYSLFANVMAILGIIVYREAEPIQPQPQQLSATLLTLVKYIQPNMYSFP-AAAKWAPASCSLAYALNKWFLIFQILVVVLMCSIFLVISTCAVANYRIGKRWRFQLEANGYPLGLLVIAFVGYVTCFYAKETVAQLTLDVLNESKLNSIFAFSKGELDIVSLTMMMTLGAIGVGTCKGDLEKFKLGAFISYIHVVLSYPSVLATIHAYNSVTYPYNKDKSLAQAFSIWSLDPAYGCPAYVTAKSAIFER 405
BLAST of NO06G00400 vs. NCBI_GenBank
Match: XP_005853731.1 (hypothetical protein NGA_0163502 [Nannochloropsis gaditana CCMP526] >XP_005854371.1 hypothetical protein NGA_0163501 [Nannochloropsis gaditana CCMP526] >EKU21986.1 hypothetical protein NGA_0163501 [Nannochloropsis gaditana CCMP526] >EKU22627.1 hypothetical protein NGA_0163502 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 398.7 bits (1023), Expect = 3.000e-107 Identity = 213/357 (59.66%), Postives = 235/357 (65.83%), Query Frame = 0 Query: 59 LARRLFQIQDRSLTVLRVLFVIGIPLTIINISFACAYAWLFANQYAYTKDDWQRCLIYPNQGVDVFGNHAEDKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYALFTNMMALLGIIVYREAEPIQPQPQQLSATLLTLIKYIHPHMYDFPDATAKWAPSSCAPAYHLNKWFLIFQIMVVVLVASIFVVVATCAVANYKEGKRWRFQLQGNAYPLGLLVVAFAGYVTCFYAKETVAQLTLDVLSDSNMDNFFVFSKGELDIVSLTMMMTLGAIGVGTCKGDLEKFKLGAFISYIHVVLSYPSILATFHGFNGVTYPFNKDKSLATSFDIWSMDSATGCPAYISTRSSIFAR 416 LARR FQIQDRSLT LR+LFV+GIPLTIINISFAC YAW+FANQY+YTKDDWQRCL+YPNQ VD G DKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPY+LF NMMA+LGIIVYREAEPIQPQPQQLSATLLTL+KYI P+MY FP A AKWAP+SC+ AY LNKWFLIFQI+VVVL+ GDLEKFKLGAFISYIHVVLSYPS+LAT H +N VTYP+NKDKSLA +F IWS+D A GCPAY++ +S+IF R Sbjct: 50 LARRYFQIQDRSLTALRILFVVGIPLTIINISFACVYAWIFANQYSYTKDDWQRCLVYPNQAVDPLGGSTADKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYSLFANMMAILGIIVYREAEPIQPQPQQLSATLLTLVKYIQPNMYSFP-AAAKWAPASCSLAYALNKWFLIFQILVVVLM------------------------------------------------------------------------------------------------GDLEKFKLGAFISYIHVVLSYPSVLATIHAYNSVTYPYNKDKSLAQAFSIWSLDPAYGCPAYVTAKSAIFER 309
BLAST of NO06G00400 vs. NCBI_GenBank
Match: EWM21737.1 (hypothetical protein Naga_100270g4 [Nannochloropsis gaditana]) HSP 1 Score: 188.3 bits (477), Expect = 6.100e-44 Identity = 128/394 (32.49%), Postives = 202/394 (51.27%), Query Frame = 0 Query: 71 LTVLRVLFVIGIPLTIINISFACAYAWLFANQYAYTKD--DWQRCLIYPNQGVDVFGNHAEDKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYALFTNMMALLGIIVYREAEPIQPQPQQLSATLLTLIKYIHPHMY-DFPDATAKWAPSSCAPAYHLNKWFLIFQIMVVVLVASIFVVVATCAVANYKE---GKRWRFQLQGNAYPLGLLVVAFAGYVTCFYAKETVAQLTLDVLSDSNMDNFFVFSKGELDIVSLTMMMTLGAIGVGTCKGDLEKFKLGAFISYIHVVLSYPSILATFHGFNGVTYPFNKDKSLATSF---DIWSMDSATGCPAYISTRSSIFARDQGAAHKLCRMCHLSLVGQLIQFCAQHLVVVACLYILYAN 456 L +LR LF + +PL+I+ +AC Y W+F N Y +D WQRC++Y N N+ ++A+++ G +F+F+ + FK Y+G++D D+LPY+L LLG +VYR P+ P +L+ TL++L ++ P MY D PDA +C A +N FL F V+VL A+ F + A Y+ + R+ L + L L+ +A A Y+ AKE A TL +L F F + LD V L +++T+ ++ G CK + E FK +F +Y+HV+LSYP +++ F ++ Y F D T F D A ++ ++ ++G CR ++LVGQ QF HL + ACL ++ AN Sbjct: 123 LGLLRKLFYVVMPLSIVASIYACLYGWIFVNTPTYLQDPTSWQRCIVYNT------NNANATPQNFAVSASAFGGMMFIFMGLGFKAGYLGLQDMDLLPYSLTVTCYTLLGQLVYRPVNPVVPAITELTPTLISLASFLRPGMYADVPDAA-----GACQHARRVNVSFLAF---VLVLFAANFCNLLLLLYATYRTRRVPRSSRYLLVWHRPALCLVGLAIAAYIVTIAAKEDAALKTLFLLDKVGHGYLFPFQRPTLDTVGLFLLLTVASVVYGACKQEPESFKWASFTAYVHVLLSYPILISNFQAYH--LYGFWTDAG-CTHFLETDTTHAGGANRQLLFLVAKNKYPETERG----FCRDTRVALVGQCAQFIIMHLAIGACLLVVVAN 495
BLAST of NO06G00400 vs. NCBI_GenBank
Match: EWM26963.1 (hypothetical protein Naga_101509g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 179.9 bits (455), Expect = 2.200e-41 Identity = 100/261 (38.31%), Postives = 152/261 (58.24%), Query Frame = 0 Query: 65 QIQDRSLTVLRVLFVIGIPLTIINISFACAYAWLFANQYAYTKDDWQRCLIYPNQGVDVFGNHAEDKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYALFTNMMALLGIIVYREAEPIQPQPQQLSATLLTLIKYIHPHMY-DFPDATAKWAPSSCAPAYHLNKWFLIFQIMVVVLVASIF-VVVATCAVANYKEGKRWRFQLQGNAYPLGLLVVAFAGYVTCFYAKETVAQLTLDVLSDSNMDNFFVFSKGEL 324 ++ +++ L++L ++ IP + + A YAW+ QY YT +DWQRCL+ PN+G G D+T + +AA++A + VF+I+ F G+ D D+LPYALF + LLG+ VYRE+ PIQP+P+ +SATL+TL K+IHP MY D P + PS C A+H N+ FL+ Q M+++L +F + V T A + +L G L L+ V GY+ AKE VA T+ VL +S + F+F K ++ Sbjct: 15 EVDRKAIFALKILLLVAIPTVMASTILATVYAWIQGRQYGYTVEDWQRCLVSPNKG----GFGVGDQTLFTGSAATFAMKAVVFLILSFNGVNAGLIDHDMLPYALFVSFSGLLGMTVYRESSPIQPEPRVMSATLVTLTKFIHPRMYADLPAYQGQPEPSLCTHAFHFNQAFLVVQYMMLLLGVGLFSIAVYTIA---FSPRDYLDVRLAGTRATLTLVPVIMTGYLLTLLAKEIVAVETMQVLQESQLGYMFMFKKADM 268
BLAST of NO06G00400 vs. NCBI_GenBank
Match: XP_005855162.1 (hypothetical protein NGA_0147800, partial [Nannochloropsis gaditana CCMP526] >EKU21203.1 hypothetical protein NGA_0147800, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 143.3 bits (360), Expect = 2.300e-30 Identity = 103/318 (32.39%), Postives = 161/318 (50.63%), Query Frame = 0 Query: 145 VFVFIIVVFKMAYVGVKDTDILPYALFTNMMALLGIIVYREAEPIQPQPQQLSATLLTLIKYIHPHMY-DFPDATAKWAPSSCAPAYHLNKWFLIFQIMVVVLVASIFVVVATCAVANYKE---GKRWRFQLQGNAYPLGLLVVAFAGYVTCFYAKETVAQLTLDVLSDSNMDNFFVFSKGELDIVSLTMMMTLGAIGVGTCKGDLEKFKLGAFISYIHVVLSYPSILATFHGFNGVTYPFNKDKSLATSF---DIWSMDSATGCPAYISTRSSIFARDQGAAHKLCRMCHLSLVGQLIQFCAQHLVVVACLYILYAN 456 +F+F+ + FK Y+G++D D+LPY+L LLG +VYR P+ P +L+ TL++L ++ P MY D PDA +C A +N FL F V+VL A+ F + A Y+ + R+ L + L L+ +A A Y+ AKE A TL +L F F + LD V L +++T+ ++ G CK + E FK +F +Y+HV+LSYP +++ F ++ Y F D T F D A ++ ++ ++G CR ++LVGQ QF HL + ACL ++ AN Sbjct: 1 MFIFMGLGFKAGYLGLQDMDLLPYSLTVTCYTLLGQLVYRPVNPVVPAITELTPTLISLASFLRPGMYADVPDAA-----GACQHARRVNVSFLAF---VLVLFAANFCNLLLLLYATYRTRRVPRSSRYLLVWHRPALCLVGLAIAAYIVTIAAKEDAALKTLFLLDKVGHGYLFPFQRPTLDTVGLFLLLTVASVVYGACKQEPESFKWASFTAYVHVLLSYPILISNFQAYH--LYGFWTDAG-CTHFLETDTTHAGGANRQLLFLVAKNKYPETERG----FCRDTRVALVGQCAQFIIMHLAIGACLLVVVAN 303
BLAST of NO06G00400 vs. NCBI_GenBank
Match: EWM24397.1 (hypothetical protein Naga_100283g1 [Nannochloropsis gaditana]) HSP 1 Score: 101.7 bits (252), Expect = 7.600e-18 Identity = 55/154 (35.71%), Postives = 89/154 (57.79%), Query Frame = 0 Query: 59 LARRLFQIQDRSLTVLRVLF-VIGIPLTIINISFACAYAWLFANQYAYTKDDWQRCLIYPNQGVDVFGNHAEDKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYALFTNMMALLGIIVYREAEPIQPQPQQLSATLLTLIKYIHPHM 212 L RR + SL +LR++F ++ PL I + F C YA ++A + +Y +DW +CL PN GN D + +A+++AG+ ++ ++V +G++D D L ++ FT ++ LLGI +YRE+ P P +S TL TL KYIHP + Sbjct: 26 LHRRTSKASQESLKLLRIIFPLLVAPLCITSFIFTCLYAHIYAREGSYGPEDWPKCLTVPN-----IGNLHLDNNRFCTSASNFAGQAYLSLLVAAGGLQLGLRDNDYLLFSSFTCIVGLLGITIYRESYPYFLDPHFMSTTLFTLSKYIHPRI 174 The following BLAST results are available for this feature:
BLAST of NO06G00400 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 7
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following gene feature(s) are orthologous to this gene:
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G00400 ID=NO06G00400|Name=NO06G00400|organism=Nannochloropsis oceanica|type=gene|length=4436bpback to top protein sequence of NO06G00400.1 >NO06G00400.1-protein ID=NO06G00400.1-protein|Name=NO06G00400.1|organism=Nannochloropsis oceanica|type=polypeptide|length=485bpback to top protein sequence of NO06G00400.2 >NO06G00400.2-protein ID=NO06G00400.2-protein|Name=NO06G00400.2|organism=Nannochloropsis oceanica|type=polypeptide|length=549bpback to top protein sequence of NO06G00400.3 >NO06G00400.3-protein ID=NO06G00400.3-protein|Name=NO06G00400.3|organism=Nannochloropsis oceanica|type=polypeptide|length=426bpback to top Synonyms
Publications
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