NO06G00320, NO06G00320 (gene) Nannochloropsis oceanica

Overview
NameNO06G00320
Unique NameNO06G00320
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4238
Alignment locationchr6:137395..141632 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:137395..141632 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO06G00320 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G00320.1NO06G00320.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G00320.1NO06G00320.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G00320 ID=NO06G00320|Name=NO06G00320|organism=Nannochloropsis oceanica|type=gene|length=4238bp
CCTTTTATCCTCCCTCCGTCTCTCCTCCTCCTCCTCTCCTCCATGTACGG
CCGCATCACCCGCCGCCAATATCCTACCGCCCGGCGTTGCGTGTCCACAA
ACGACTCCGTCCTCGGGGGCCACCCTCCCTCCCTCTCTCCTCCTCTCCAT
TCTCCTCGATACCGCTCCTCCCTCTGAGGGTCAACCTCGCTCCCGGGCTC
GACAGGGGGAGGAGCCAACGAAAGGGATTTCGCCCATTGTTTAACCGTTT
CCTCGGTGTATTTTCCATAGGCTTCTTCCGGCGTCAGGCCAGCAAGACCC
CACATGCGCTCGTTGAGTTCCCCGGTGGCAGTGGAGGGGAGATATGTGAG
CTGGGAGGAGAGGAGGGCAATCCAGGCAGTTTTGATAGCGCTGAGGGAGG
AAAAGGAGGGAGGAAGGAAAGGTTTGTGTGGGTGAAGTGAAGATCATCAG
AGGTTCAGCTGCATGGAAATACACATCATTCTATCCGGTTTATTTCCCTT
TTACTTTGCTTTCGTCCCTTCGTCCTTCCCTCCTTCTCTCCCTACCGCTT
TAAATAAGATGTGTAAACATGAACAGGCACGATGCCATGCTCCTTAAGCA
CCCGCCCTGCTTCCCTCGCCTCCTCCTCCCCCTTCTCTGTCAGGGGTACA
TCCGTCCATCCTATGTATCTGTTATCTCTGTTCCACGTGGACTCGCCGTG
ACGCAGCAAGACAAGGCGATAAGACCAGGGCACTAGAGGGAAAGAGGGAG
GGAGGGAGGGAGGGAGTGACGGACGGAGGGAGGAAGAATGAATGGGTAGT
CGGTACAGAATAATGTTATTGACGCAAGTGCCCATATTTTGTGCTTGTAC
GGGCCGAGTGATTAAGCATACCCACCAAATGTGGCAGGGATAGACAATTG
GAGGTACGTACCTTCGCTGCCACCCTCGCTGGATGATGAGGGTGAAGATG
AAAATCCTGCTGGGCTTGTATATCTTCCTGCTTCTTTTGGTGCTACCGCT
CCTACCAATGAGACTGATCCTGATGTAGTCGTGGTGGTGCTAGCAGCGAA
GAGAGGGACAAAGGCGCGGACTCTACCGAGGAGCAGGAGCATAATGATGG
TGCCCAAGAAGGAGGAAAGGGGAAAGAGTCCTTGCTTTCTTTTCAGCCGT
TGTGGTGTCGGCTCAATAAGCGCCACGTGCATCCTTGATATGGCGTTTTC
GTGTAGATTCAAGGGGTTGATGATGTGATGGGAAAGGAGATACAGGATCA
TCCCATGATAATTGCATCATGGAGGGTGCGTACTTAGTTGCCCCGAGTTC
GAGTTGCCCCGAGTTGCTTGGTGTTCGATCCGCAGCATCAAAGTGGTTGG
AGGAAATACCACATGCGTGAGCTGTGCACTTGCGCCATCCACGGGTAGTA
TGCTTTTATTAATATGCTTTTACTTATGCGTGCTGTGGTCTTGGTTTCTC
CGAATTCGTGGCATAGGAGGGAAATCGCCTACATGCTTGCTTTTGGATGG
GCCCACCAACGGCTCGGAGGTATTGTAAACATAACCCTAAACTGCGGCCG
CCAGTGTGTTTCACACTCACCCGGACGCCCTGCCCTGCATACACCACTAC
AGCTTCTGCTTCTGCATACCAATGGTGTCGTAAGTCGGTCCCTCTTGCTT
CCCTTCATCGCCTCCCTTCGCGCATCGAAGAGGGCATAGCAGCTCAACTC
CATGCAAGAGCGGAGAGCTGTGGTCGCCATAGTGACAAGCTGCCTCGCCC
TGGCCGTCTGTATCTGGCTCATCCTTGTCCAGCTTGTGCTCACGCTCAAA
CGACGAGGCAGAAGAGGAAGCACTACACCTCGGAGACGTTCTCCCAGTCC
CTTTGTTCGCACTGCAATTTTGGTCCAAGCCACCGCTACTGCCGTGCATG
CCACAGTTATCATTGCCACTGCTTTCCTCAACCTCTTGAACAATCGCTTT
GTTTCTGCCGCATGTATAACCTGCATTGGTGTGGCTCAAACAATCAACGG
CATTCTAGCCTGGGAGCTGTATTTGGTCGTGCACCGCTTTAAGgtgagtt
ggtgggggtggtagtgtctccccaaggatgtgatcaagacctccatttca
aatcaatggcagacctcatcatatgcttccttgccaaccctccttccctc
cctcccctccatccctctcacttactagCCTTCCCCCATCGTCCACCGCG
TCGCCCACCTCTGTATCGCCTTCGTCTTCATCCTCCCTTACCTCGCTCCA
TGGGCCAATGTCGGCATCCGGGGGATGAGTGAGGAAGATGCGGCTGATTT
AGAAATAGAGGACGCGTCCGGAATGCTGACTCTACTCGTGGTAGTGGTGG
TGGCCTTGGCGGTGACCGTCCGTGTATGCTTTGAAATAGGgtgagcgctg
cctcctccgtccctcctcccttcttcactccctccctcctcctccctcac
tcgcttcctccctcccttcacaataaaatttcacattccattcaaataat
catctccttccattctcccatccttccattcttcgctcgactcctcccac
catcgtccagCCTGGTGATCATGATCTGTTGTCGTATCTCGGCGCTTCGC
GCCATTATTCGCATGGATATCCCTAGACCCCAATTGATTGCCCTCAACAC
CATCACCACCGCCACCACCGCCTCCTCCGCCTCCTCCTCACCCTCTCTTC
CTACCTTACGGCCTCCGTTGATCGCCCTCAACACCATCACCGCCACCACC
TCCACCACCTCCTCCTCCTCCTCCTCCTCCTCGTCCCTCCCTCCCATCCT
CTCATTCTCATCACGTGCCTCCTCCTCCCGCACGGCCCCAGTCCTGGTGG
AGGACGAACAACGAGCTCATCAAGCCCATCACCTCTATCTCTCCTTGAAG
ATTCTCTTCTACCTCATTACCTATGGGGCGTTAAGCATCGTGAACAGCAT
TTCCCTCGACGGCGAGGTTCCTCAGAGCACCGTGTTGCAGgtacgtcccc
tccttttttccctcccttctttcctccctccctcctggcttctctgtttc
aatcttcacattttcccccttccactacctttacatctctcatctctttt
tttctctctctgcccccctcctcatttcctctctcccttactccccctca
acagGTTGGACTCTTAATACAGCTCACCATTTGTCTATTTACCTACTTTT
GGCTTGATGCCAACACCTGGGTCCCTCTTCGCCTCCCTCCCTCCTTCCTT
CACTACCTCTATCGCCGTCTTCTCGCTCCGAACGGGCGAGTGCAAGAACG
AGAAGAAGAGGAAGAGGAGGGTGAGGTGATGGAGGTGGAGGATGGCGGGA
TGGCGGTCGATGAGAGACGAAGGAAGGGAAGGAAGGGCCTTACTGCTTCT
GAAAGCAAGAACAAATGGAGAGAAAAGCGACAGCAACTCATGCTGAGGGG
GAAACACAAGAAAGAGGACGAGATGGAGGAAGGGGAGAAAGATGATAAGG
AGGGAGAAGAGCGAGGTGAAATGGGAAAGGAAAGATGCTATACAGCAAGA
GCAGATGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGAGAGGGAATATCC
TGAAGAAACCGATGTTGATACAGTCCTTCCCTCGCGTTCACCGCGGACAC
TTTATCTTGCCTATGCAATCAGCAGCGGTGCAAGGGTCACTGACAAGAGC
AGCTATGGTCAAGGAGGAGGAGGGATAGGTAGATGTGGAAGTGTAGCCTC
TTCAAGAAGTGAAAAAAGTGGAGAATATGGAAAGATGCAGCGGGCCTTGT
TTGAGCCGAAATGGATGGAGGGTCTTGCAGAAAAGGAGGAAGAGGGGACA
GAAGAAGACAGGGGAGGAGGAGGAGGAGGAGGAGGAGGAATGGGAGGTCG
AGACTAAGGGAAAAATTTTGGATTGAAAAATTGTCTGCAGCGTGAAAATG
AAGTCGAAATCGAAAAATGGTGTATATTGACGCTCTTTCATCTCAATTCA
TGTAAGGTTGTAAATGGATGTGTCTCGTTAAGCTTGGAGAGGGTCCTGCC
CCGATCACCACTCTCCCACGGGACTTGTCCACCCCTAATGAAGAAACTTG
TCGTGCCAAAAAGGAAATAACCACGTAGTGGTATGACAAACCAAAGCATT
TTTAAACTTTGATGTGGATACCCGTGATACCTTAACTATCAAGACTGAAA
AAAACATATATAAAGGTTCGTATAACCTTGATAGGAAG
back to top

protein sequence of NO06G00320.1

>NO06G00320.1-protein ID=NO06G00320.1-protein|Name=NO06G00320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=579bp
MQERRAVVAIVTSCLALAVCIWLILVQLVLTLKRRGRRGSTTPRRRSPSP
FVRTAILVQATATAVHATVIIATAFLNLLNNRFVSAACITCIGVAQTING
ILAWELYLVVHRFKPSPIVHRVAHLCIAFVFILPYLAPWANVGIRGMSEE
DAADLEIEDASGMLTLLVVVVVALAVTVRVCFEIGLVIMICCRISALRAI
IRMDIPRPQLIALNTITTATTASSASSSPSLPTLRPPLIALNTITATTST
TSSSSSSSSSLPPILSFSSRASSSRTAPVLVEDEQRAHQAHHLYLSLKIL
FYLITYGALSIVNSISLDGEVPQSTVLQVGLLIQLTICLFTYFWLDANTW
VPLRLPPSFLHYLYRRLLAPNGRVQEREEEEEEGEVMEVEDGGMAVDERR
RKGRKGLTASESKNKWREKRQQLMLRGKHKKEDEMEEGEKDDKEGEERGE
MGKERCYTARADAAAATAAAAAEREYPEETDVDTVLPSRSPRTLYLAYAI
SSGARVTDKSSYGQGGGGIGRCGSVASSRSEKSGEYGKMQRALFEPKWME
GLAEKEEEGTEEDRGGGGGGGGGMGGRD*
back to top
Synonyms
Publications