NO06G00300, NO06G00300 (gene) Nannochloropsis oceanica

Overview
NameNO06G00300
Unique NameNO06G00300
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4905
Alignment locationchr6:127028..131932 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:127028..131932 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO06G00300 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G00300.1NO06G00300.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G00300.1NO06G00300.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G00300 ID=NO06G00300|Name=NO06G00300|organism=Nannochloropsis oceanica|type=gene|length=4905bp
CAGATACAAAAAAGTCGTTGTGTAAGTCTGGAAGCCGCCGCGAGGGGTTG
CCAAGTCTGATAAAGCAATCGATTGATCATGCTCTTCGACGCAGAGCACG
TCGTGCTTTCCCACGCCCTGAAGGAAACCTCTTACCGAAGCCACCAGCTT
GCTGCCTCCCCCTTCTTATCTGCGGAATCTCCACCTTCGTCATTGgtacg
ttaagtgggaatcatacgcctggagtagatagggataactattgtcggag
attgacgtgccctgtctatttttttgcgcagGAGCATTACTTGCTGCCTC
ACCCACCACAGCGGGCCCATGGGGCGCACGAGCAACAGCGCCACCGCCAT
CACCACCATCTCCATCATCATCACAAGCAGTACCAGCGGCCACAGCAACC
ACAGTCACGTCATCGGCCCAACCCACCAAAAGCCTCCGACGCGCCCTCCT
CCTTCTCGCTCATCGTATCGTCATCCCCGTCGGCTTCCTCCTCTCCCGCT
TCTTCTTCTTCCTCGTCTTTGAACGCCATCCCTCCTTTCCCCGCTGCCTG
CAGCTCTTCGTCCTTACCTGTGTCCACCTCTACCTCACCTTCACAATGGT
GTGCAGACAAGGGGATTACTGACAACTGCCGGCGGTATGGGCCGCCTCCT
CGTCCTCTCTCGTCTCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCGACGACAATCAAGGAGCCACAGCAAATTTGAACGTTCTCACG
GCCTCTTGTCTTCTCCGTCTGTCGTTGACGTCTCATCTTCTTCCTTTCCT
TCCCTCCCTTCCCACTCCTCTCGCTCTGCCTCTCCTTTTTCGAGTGGCTG
CGGAGCAGCAGCAGCAGCAGCAACCGCAGCAGCAGCCACTGCTGCACGAG
AAAGAGGGATTAAAGGCCTCCATGCGTCTCCATCATTTGTCGAATACGTG
ATGGGAAAGgtaacgcaggagggagggaaggagggagggagggagggaag
gagagagatctccttgcatgaaccaccaccagagggaggggaggaaggag
ggctctctctttatgattgttctacacgcgttcctccctcagcatacatt
cacacactattccccttctcccccccccccccttttttttctctctctct
acctatccgcccatctatcaatctacctgtcgatcaaaatatattcgtac
ctccatctggttctgaaagAGCGTTTCTTTTAATCCACGTGCGCAAGAGT
TCGACGGTGCCGCCCTTACAACCTCCTCTTCCTCCCTCCCCCCTCTCCGT
ATTGTGGAGGAGGAGAAGAAGGAGAAGGAGGAGGAGGAGGAGGATGAAGA
AGAGGAGGAAAAAGAAGAGGAAGAGGAGGAGGCGGCGGCGGCGGCGGCGG
CGGAGGAGGAGGAGGAGGAGGAGAGAGAGGAGGTGTTGGTAGGAGCATAT
CCAGCGTTTGGTCCTCCCTCCCTCCCCTCTTCCCTCCCTTCCTCCGCTGG
AAACAGCGGCAGTACAGGCAGGAGATGGAGGGAGGAGGGGAGGGAGGGAG
GGAGGGAGGGCGGGTCCCTCTATTCTGGTATGGACAGGAGCAAGGAGGGG
GGAGGGATTAGGCTCGACAGACGGACACAGGAAGAGGTGGGAAAAAAAGC
GCGCGAGGAGAAGGACAGgtaggtggggaggaagggagggaaggaggggt
gcaattagtagagtgtctgcccgaccttcatcttctactccctccctccc
tccctccctccctccctccctccctccctccctccctccctttctctcac
agGGTCTCAGCCTTGAGCCTCGCGCTCTCGTCCCTCGATACCATGAAGAC
TCAGGCAATGGAAGGAAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGGAG
GGAGGAAAGGAGGTAGAGGCCTCGCTCCGATATTGCTTTTAATTTACTTA
CCGGAGAGGAAGACCGTGACTCTTTTGGTGGGTGAGCAGGCGTCGGTGAG
GACAGTCATTAGACAGgtagggaggtagggagggagaaaaggagggaagt
aggtaggtagggagggagggagaaaagaagggagggagggagggagggga
gaaggacagggagagagggagggagggagagaggaaggaaggtggatagg
taggtaggtaggtagggagggagggaggaaaggagggatgattggaaaaa
cgattctgacgatttttaatcatatctctttttaaaacagGCTCTGGCTG
CTGCCGGACCAAAGTATTGTGGACCCGCGCGACAGTTTGAATTGAGgtga
gtagccacccctccctccttccctccctccctccttccctccctccctcc
ttccctccctccctccttccctccctccctccttcttgtacgagctttcc
ttcgcttcctcctaacccaccctcctcatcctccctccttccctccctcc
ttcccttcctcctaacccaccttcctcgccctcccttcttcagGTTCCAC
GATGGCGACGGCGAACCCGATGAGGATCTACCTGCCTTAAATCGgtaaat
actttcgctcgctcgctccctccctccctccctccctccctccctcccaa
cgatcaaattaaccacccacccaccctctctccctccctccctcccttca
gGGATCGAAAAATCAGAAACTTCATCCCCTCCAGTAATTCCTCTTGTTTT
CGAAGCATGGGATGGAGGGGGGGAGGGAGGGAGGGAGTGGGGGAGGAAGG
GAGGGAGGGCGAGAAGAACGTACCGACGTTTTGCCTGTGTCGTTGCGGGG
GAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGGAGAGCCCACGAAATCAGTCGCTGCCTCGACGGC
CGAAGATGGAGAAGCGAAATGgtaaggagggaaaaaagggctgagagccc
ttcctcccctcccctcctccctccctccctcccccctcccctccttatct
tcttctcgacctccctccctttacggcaagctccacatggtcctttgtct
tgtacctgtgaactgaatcctcacaccactctctccctccctccctccct
ccctccctccctccctcccttccttcctccctcccttcctccctcccacc
ctccagCCGGACGATCTCCGTAGTCTTCCCCAGCGGAGCGGTGCTCTCGC
AATCCTTCCCTCCCTCCCTCCTTCACCGGCTTAGTATCAAAGACCTTATC
CAGCTGCTTCTCAGGGGAAATCACgtaaggagtggagggagggagggagg
gagggagggagaaagggagggacacatcaacctgctgtttctttttgctt
cttttctcaatcatggatgaatttacccattggcatatcctccccccttc
cctccctccctccctccctccctccctccctcccttcctccccctttcag
CAATTACAGTTCAGCATGTACCGATACTGCCTCCACTACCCCGGGGAGGA
GGGAGGGAGGGAGGAGGGGAAGGAGGACGAAGGGGAGGAGGAGAATGAGG
AGGGCGAGAGTCGGAGGAGAGGGAGGAAGGGGGGAAGGAAGGGGGACGTT
TCGAGGACATCGGCCTTGTCGTTTTCGTCTTATGTGCTGGAAGAGCGGCT
GCAGCCTCGCCCGGCGCTTGACCCGgtgaggagggagggatggagggggg
gagagagggagggaaaggaagagaagggaagaggaactttcatatttcat
tcactctccatcatctctcattcctcccgccctccctttcgccctccctc
cctccctccctccctccttccagAGCTTGAAACTGATCGACCTCACCAGT
GACCGTCTCGTTCTGAAAAAAAAAATCTACGTCGATGACCCTGCCCCTCC
TTCCCTCCCTCCCTCCCGCCCTTCCTCCCTTCCTATACCCCGTCCCCCTT
CACTCTCTGTTGGACGAGGTGGAGGAAGGGAGAGACGGATGTCCTCGGTT
GTCACTTTTGCCTCTTCCTCCACCTCTTCCTTCCTCCCTCCCTCCCTCCC
TCCCTTGCCTGCTTTCTCATTTTCCTCTTCTTCCTCCTCTCCCTCCTTGT
CGTCGCCCACCTCAGTACCCCGGCGCGACGGAGGGAGGGAGGGAAGGGGA
GAGGGGAGGAAGAAAGGAGGGCCTTTGGACAGGCTTCGGGCGCTGGTGAT
GATGAAGGGGGGAAAAACATGGCTCAAGGAGTGAAGgtgaggaggaggag
gaggaggaggaggaggagggggaggaggaggagggggaggtggagggaag
agacaaggaggaaggaggattgacgcaccatcgtttcaagtacgcgacgg
acgacaaacaccaaaaacgatgcattgagtgactctccgcccgtaggcga
taggcacctaaatgcactttccttcaccaaccacccctcatgcccttccc
ttccaatcccacaatttccttcagCCATAGGAACCACGCTGATTGAGTAG
AGAGGTAAAGGATTAATCGAGGAAATCAAGGACGAGGGATGAGAAAGTCA
AAAACGATGGAAGAAAAGGAAGGAAATGAGACAGCACCCTCCCGTGTAGA
AATCAAAGTCAAGAACAGAGGGAATAAAGCCCTGTAGGTGGGCGTGTTGC
TTTTTGGTCCAGATGTATAGGGAAAATGCTAAATTGATGGTTAGCCCGCT
GTATCCTCTCTTCCCTCTCTTCGTTTAAATTTATTTTTATTTTTTAAGAA
CTTCCCTTCCCCCCCCTTATTGCTACTACTACCACAGCTGCTGCTGCTCC
ATTCCCCCCCCTCGTCCTCTCTACATGCTTCGTCGTCATCTCACTCGCTG
ACACTCATATGTCCCACCTTCCCTCTTTCCCTCCTTCCCCTCCCTCCCTC
CTTCC
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protein sequence of NO06G00300.1

>NO06G00300.1-protein ID=NO06G00300.1-protein|Name=NO06G00300.1|organism=Nannochloropsis oceanica|type=polypeptide|length=863bp
MLFDAEHVVLSHALKETSYRSHQLAASPFLSAESPPSSLEHYLLPHPPQR
AHGAHEQQRHRHHHHLHHHHKQYQRPQQPQSRHRPNPPKASDAPSSFSLI
VSSSPSASSSPASSSSSSLNAIPPFPAACSSSSLPVSTSTSPSQWCADKG
ITDNCRRYGPPPRPLSSQQQQQQQQQQQQQQRRQSRSHSKFERSHGLLSS
PSVVDVSSSSFPSLPSHSSRSASPFSSGCGAAAAAATAAAATAARERGIK
GLHASPSFVEYVMGKSVSFNPRAQEFDGAALTTSSSSLPPLRIVEEEKKE
KEEEEEDEEEEEKEEEEEEAAAAAAAEEEEEEEREEVLVGAYPAFGPPSL
PSSLPSSAGNSGSTGRRWREEGREGGREGGSLYSGMDRSKEGGGIRLDRR
TQEEVGKKAREEKDRVSALSLALSSLDTMKTQAMEGREGGREGGREGGRK
GGRGLAPILLLIYLPERKTVTLLVGEQASVRTVIRQALAAAGPKYCGPAR
QFELRFHDGDGEPDEDLPALNRDRKIRNFIPSSNSSCFRSMGWRGGGREG
VGEEGREGEKNVPTFCLCRCGGEEEEEEEEEEEEEEEEEEEEEGEPTKSV
AASTAEDGEAKCRTISVVFPSGAVLSQSFPPSLLHRLSIKDLIQLLLRGN
HQLQFSMYRYCLHYPGEEGGREEGKEDEGEEENEEGESRRRGRKGGRKGD
VSRTSALSFSSYVLEERLQPRPALDPSLKLIDLTSDRLVLKKKIYVDDPA
PPSLPPSRPSSLPIPRPPSLSVGRGGGRERRMSSVVTFASSSTSSFLPPS
LPPLPAFSFSSSSSSPSLSSPTSVPRRDGGREGRGEGRKKGGPLDRLRAL
VMMKGGKTWLKE*
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Synonyms
Publications