NO06G00290, NO06G00290 (gene) Nannochloropsis oceanica

Overview
NameNO06G00290
Unique NameNO06G00290
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1080
Alignment locationchr6:125243..126322 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:125243..126322 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO06G00290 vs. NCBI_GenBank
Match: EWM30045.1 (hypothetical protein Naga_101600g1 [Nannochloropsis gaditana])

HSP 1 Score: 128.6 bits (322), Expect = 2.100e-26
Identity = 83/206 (40.29%), Postives = 121/206 (58.74%), Query Frame = 0
Query:    1 MRRALSLVALGVTLALTAAETAPTLILTSIKAVDTTRANKDQWSVKGYFNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEFENTLSSPLIAAFGIE---GADEISDINYKCTE--KVGTRATKFLCTPGTAPPTAAPTSGPP 202
            MRR LSL+ALGVTL +TA +      L ++K  + ++  +DQWS+KG  ++P  N + A G  GLT  L + + D ++ T F A +C+LL N +GV CK  GAR+S+KRT+R PK A +   ++ N+ +   YY  SG+FRR +F   L  P++    ++   G+  +  I   C+E  K   R TK  CTPG AP T APT+  P
Sbjct:    1 MRRILSLLALGVTLVMTAGQ---EFTLKNVKVAERSKTARDQWSMKGNLDNPAMNVVPAIGQLGLTVNLLDVSLDPLASTAFAATNCKLLRNGRGVRCKKMGARVSIKRTRR-PKGAKV---KSSNSNSTGGYYGASGMFRRLQF---LQDPVVTPLTVQVVVGSTTLPAIVSTCSERTKGAGRITKITCTPGPAPVTPAPTAASP 196          
BLAST of NO06G00290 vs. NCBI_GenBank
Match: EWM22005.1 (hypothetical protein Naga_100353g3 [Nannochloropsis gaditana])

HSP 1 Score: 119.4 bits (298), Expect = 1.300e-23
Identity = 79/199 (39.70%), Postives = 107/199 (53.77%), Query Frame = 0
Query:    1 MRRALSLVALGVTLALTAAETAPTLILTSIKAVDTTRANKDQWSVKGYFNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEF-ENTLSSPLIAAFGIEGADEISDINYKCTEKVGTRATKFLCTPGTAPPTAAPTS 199
            MRR LSL+ALG+TLALT   T   L L SIK  + TR NKD+WS+KG   DP    +   G +GLT  L +  +DT+    F A DC +  N KG  CK+ GAR+S+ R  + PK   +     +   +   YY VSG FR  +  E+ + SPL A   ++G   +S     C+ + G   T+  C PG   PT APT+
Sbjct:   68 MRRGLSLLALGLTLALT---TGQMLSLKSIKTFERTRMNKDKWSMKGNLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTASFAAGDCMVRKNSKGAKCKMMGARVSI-RASKPPKGVKV-----KTYNSTGGYYSVSGSFRGVQLQEDPVISPLTAELTVQGVGTLSQTLTDCSVR-GAGTTRTTCVPGPIIPTNAPTA 256          
BLAST of NO06G00290 vs. NCBI_GenBank
Match: XP_005855033.1 (hypothetical protein NGA_0415500 [Nannochloropsis gaditana CCMP526] >EKU21331.1 hypothetical protein NGA_0415500 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 119.0 bits (297), Expect = 1.700e-23
Identity = 77/202 (38.12%), Postives = 112/202 (55.45%), Query Frame = 0
Query:    1 MRRALSLVALGVTLALTAAETAPTLILTSIKAVDTTRANKDQWSVKGYFNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEF-ENTLSSPLIAAFGIEGAD-EISDINYKCTEKV--GTRATKFLCTPGTAPPTAAPTS 199
            MRRA  L+ALG+TL +TA +   T  L ++K +D ++  +DQWS+KG  +DP    +   G  GLT  L +    T+  T F A DC+L  N +GV CK  GAR+S+K ++R PK A ++   N N  +   YY  SG+FRR +F ++ +  PL     +       S +   C+EK+    R T+  CTPG  P T APT+
Sbjct:    1 MRRAFFLLALGITLVMTAGQDLFT--LKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRR-PKGANVQ---NSNYNSTGGYYSASGMFRRLQFLQDPIVFPLTVVLNVPSIPFPPSAMVSSCSEKIKGAGRTTRITCTPGPTPVTPAPTT 196          
BLAST of NO06G00290 vs. NCBI_GenBank
Match: EWM22002.1 (hypothetical protein Naga_100353g5 [Nannochloropsis gaditana])

HSP 1 Score: 116.7 bits (291), Expect = 8.400e-23
Identity = 81/196 (41.33%), Postives = 108/196 (55.10%), Query Frame = 0
Query:    1 MRRALSLVALGVTLALTAAETAPTLILTSIKAVDTTRANKDQWSVKGYFNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEF-ENTLSSPLIAAFGIEGADEISDINYKCTEKVGTRATKFLCTPGTAPPTAA 196
            MRR LSL+ALG+TLALT   T   L L SIK  + T+ NKD+WS+K +  DP    +   G +GLT  L +  +DT+    F A DC +  N KG  CK+ GAR+S+ R  + PK     V ++ N+T    YY VSG FRR +  E+ +  PL A   + G   +S     C+ K GT+  K  C PG   PTAA
Sbjct:   80 MRRGLSLLALGLTLALT---TGQMLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSI-RASKPPKG----VGKSHNST--GGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVK-GTKTRKVTCVPG---PTAA 261          
BLAST of NO06G00290 vs. NCBI_GenBank
Match: EWM22004.1 (hypothetical protein Naga_100353g6 [Nannochloropsis gaditana])

HSP 1 Score: 116.7 bits (291), Expect = 8.400e-23
Identity = 81/196 (41.33%), Postives = 108/196 (55.10%), Query Frame = 0
Query:    1 MRRALSLVALGVTLALTAAETAPTLILTSIKAVDTTRANKDQWSVKGYFNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEF-ENTLSSPLIAAFGIEGADEISDINYKCTEKVGTRATKFLCTPGTAPPTAA 196
            MRR LSL+ALG+TLALT   T   L L SIK  + T+ NKD+WS+K +  DP    +   G +GLT  L +  +DT+    F A DC +  N KG  CK+ GAR+S+ R  + PK     V ++ N+T    YY VSG FRR +  E+ +  PL A   + G   +S     C+ K GT+  K  C PG   PTAA
Sbjct:   11 MRRGLSLLALGLTLALT---TGQMLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSI-RASKPPKG----VGKSHNST--GGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVK-GTKTRKVTCVPG---PTAA 192          
BLAST of NO06G00290 vs. NCBI_GenBank
Match: EWM20521.1 (hypothetical protein Naga_100335g8, partial [Nannochloropsis gaditana])

HSP 1 Score: 114.0 bits (284), Expect = 5.400e-22
Identity = 80/201 (39.80%), Postives = 109/201 (54.23%), Query Frame = 0
Query:    1 MRRALSLVALGVTLALTAAETA-PTLILTSIKAVDTTRANKDQWSVKGYFNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEF-ENTLSSPLIAAFGIEGADEISDINYKCTE--KVGTRATKFLCTPGTAPPTAAPT 198
            MR  LSL+ALG+TL  T   TA   L L SI+AVD +  NKD W +KG  NDP    + A G TGLT  L +   D ++   F A DCR+  + +   CK+ GAR+S+KR++R PK    +    ++  +   YY V+G FR   F EN + SPL AA  + G+  +SD    C +  +   R+T   C PG  PP   PT
Sbjct:    1 MRSPLSLLALGITLGSTLVTTAGQDLNLKSIRAVDRSVTNKDTWKMKGNINDPSLTFVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRAACKIRGARVSIKRSRR-PKIKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALRVNGS-VLSDTLISCYDLARKSARSTISQCEPG--PPVPTPT 197          
BLAST of NO06G00290 vs. NCBI_GenBank
Match: EWM30036.1 (hypothetical protein Naga_100179g1 [Nannochloropsis gaditana])

HSP 1 Score: 113.6 bits (283), Expect = 7.100e-22
Identity = 74/197 (37.56%), Postives = 108/197 (54.82%), Query Frame = 0
Query:    1 MRRALSLVALGVTLALTAAETAPTLILTSIKAVDTTRANKDQWSVKGYFNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEF-ENTLSSPLIAAFGIEGAD-EISDINYKCTEKV--GTRATKFLCTPGTAPPT 194
            MRRA  L+ALG+TL +TA +   T  L ++K +D ++  +DQWS+KG  +DP    +   G  GLT  L +    T+  T F A DC+L  N +GV CK  GAR+S+K ++R PK A ++   N N  +   YY  SG+FRR +F ++ +  PL     +       S +   C+EK+    R T+  CTPG  P T
Sbjct:   20 MRRAFFLLALGITLVMTAGQDLFT--LKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRR-PKGAYVQ---NSNYNSTGGYYSASGMFRRLQFLQDPIVFPLTVVLNVPSIPFPPSAMVSSCSEKIKGAGRTTRITCTPGPTPLT 210          
BLAST of NO06G00290 vs. NCBI_GenBank
Match: XP_005852576.1 (hypothetical protein NGA_0721300 [Nannochloropsis gaditana CCMP526] >EKU23255.1 hypothetical protein NGA_0721300 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 112.5 bits (280), Expect = 1.600e-21
Identity = 76/189 (40.21%), Postives = 103/189 (54.50%), Query Frame = 0
Query:    1 MRRALSLVALGVTLALTAAETAPTLILTSIKAVDTTRANKDQWSVKGYFNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEF-ENTLSSPLIAAFGIEGADEISDINYKCTEKVGTRATKFLCTPG 189
            MRR LSL+ALG+TLALT   T   L L SIK  + T+ NKD+WS+KG+  DP    +   G  GLT  L +   DT+    F A DC +  + KG  CK+ GAR+S+ R  + PK     V ++ N+T    Y+ VSG FRR +  E+ +  PL A   + G   +S     C+ K GT+  K  C PG
Sbjct:    1 MRRGLSLLALGLTLALT---TGQMLSLKSIKTFERTQMNKDKWSMKGHLEDPTLAVVSGIGTNGLTVTLLDMAADTLDTASFAAGDCMVRKSSKGARCKMMGARVSI-RASKPPKG----VGKSHNST--GGYFSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVK-GTKTRKVTCVPG 178          
BLAST of NO06G00290 vs. NCBI_GenBank
Match: EWM20105.1 (hypothetical protein Naga_101776g1 [Nannochloropsis gaditana])

HSP 1 Score: 109.8 bits (273), Expect = 1.000e-20
Identity = 68/178 (38.20%), Postives = 106/178 (59.55%), Query Frame = 0
Query:    1 MRRALSLVALGVTLALTAAETAPTLILTSIKAVDTTRANKDQWSVKGYFNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEFENTLSSPLIAAFGIE---GADEISDINYKCTEK 176
            MRR LSL+ALGVTL +TA +      L ++K  + ++  +DQWS+KG  ++P  N + A G  GLT  L + + D ++ T F A +C+LL N +GV CK  GAR+S+KRT+R PK A +   ++ N+ +   YY  SG+FRR +F   L  P++    ++   G+  +  I   C+E+
Sbjct:   37 MRRILSLLALGVTLVMTAGQ---EFTLKNVKVAERSKTARDQWSMKGNLDNPAMNVVPAIGQLGLTVNLLDVSLDPLASTAFAATNCKLLRNGRGVSCKKMGARVSIKRTRR-PKGAKV---KSSNSNSTGGYYGASGMFRRLQF---LQDPVVTPVTVQVKVGSTTLPAIVSTCSER 204          
BLAST of NO06G00290 vs. NCBI_GenBank
Match: EWM26484.1 (Neuraminidase, partial [Nannochloropsis gaditana])

HSP 1 Score: 107.5 bits (267), Expect = 5.100e-20
Identity = 80/201 (39.80%), Postives = 104/201 (51.74%), Query Frame = 0
Query:    1 MRRALSLVALGVTLALTAAETA-PTLILTSIKAVDTTRANKDQWSVKGYFNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEF-ENTLSSPLIAAFGIEGADEISDINYKCTE--KVGTRATKFLCTPGTAPPTAAPT 198
            MR ALSL+ LGVT   T   TA   L L SI+ VD +  NKD W +KG  NDP    + A G TGLT  L +   D ++   F A DCR+  + +   CK+ GAR+S+K T R PK    +    ++  +   YY V+G FR   F EN + SPL AA  I G+  +SD    C +  +   R T   C PG  PP   PT
Sbjct:    1 MRSALSLLVLGVTFGSTLVPTAGQDLNLKSIRTVDRSVTNKDTWKMKGNINDPSLTIVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRATCKIRGARVSIK-TSRRPKVKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALRINGS-VLSDTLTSCYDLARKSGRNTISHCEPG--PPAPTPT 197          
The following BLAST results are available for this feature:
BLAST of NO06G00290 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 17
Match NameE-valueIdentityDescription
EWM30045.12.100e-2640.29hypothetical protein Naga_101600g1 [Nannochloropsi... [more]
EWM22005.11.300e-2339.70hypothetical protein Naga_100353g3 [Nannochloropsi... [more]
XP_005855033.11.700e-2338.12hypothetical protein NGA_0415500 [Nannochloropsis ... [more]
EWM22002.18.400e-2341.33hypothetical protein Naga_100353g5 [Nannochloropsi... [more]
EWM22004.18.400e-2341.33hypothetical protein Naga_100353g6 [Nannochloropsi... [more]
EWM20521.15.400e-2239.80hypothetical protein Naga_100335g8, partial [Nanno... [more]
EWM30036.17.100e-2237.56hypothetical protein Naga_100179g1 [Nannochloropsi... [more]
XP_005852576.11.600e-2140.21hypothetical protein NGA_0721300 [Nannochloropsis ... [more]
EWM20105.11.000e-2038.20hypothetical protein Naga_101776g1 [Nannochloropsi... [more]
EWM26484.15.100e-2039.80Neuraminidase, partial [Nannochloropsis gaditana][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G00290.1NO06G00290.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G00290.1NO06G00290.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G00290 ID=NO06G00290|Name=NO06G00290|organism=Nannochloropsis oceanica|type=gene|length=1080bp
CAGGAAATAAGCCTTTCTTCGCGATACAATATGCGTCGCGCTCTTTCTCT
GGTTGCCCTTGGCGTCACACTCGCCCTCACGGCGGCTGAGACTGCGCCGA
CGTTGATTCTTACCTCCATCAAGGCAGTTGACACGACCAGGGCAAACAAG
GACCAATGGAGTGTCAAGGGCTACTTCAACGATCCTGATGGGAATGCTAT
CCTGGCCTTTGGTGACACTGGCTTGACCGCGCTGCTTGCAAACGGGAACG
AAGACACAGTGAGTGAAACGGACTTTGACGCGGATGATTGCAGACTGCTC
AACAACGATAAGGGAGTCATTTGCAAGGTAACGGGCGCCCGCCTCTCGCT
CAAGAGGACTAAGAGAGTACCCAAGGACGCCATGCTGGAGGTGCAGAGGA
ACCGCAACACGACCACCGCCTCTTCCTACTACAGGGTTTCGGGTGTTTTC
CGCCGTCAGGAGTTCGAAAACACTCTTTCGTCGCCTCTGATTGCTGCCTT
CGGCATTGAAGGCGCAGATGAGATCTCTGATATCAATTATAAGTGCACTG
AGAAAGTAGGAACCAGGGCCACCAAGTTCCTCTGCACGCCTGGCACCGCC
CCGCCTACTGCTGCCCCTACTTCTGGTCCACCCTAGAGGTGGTCGTGTGG
TAGTTAAGCATCCATTTGGCTTCCCACCCTCGCAAGGGACGCTATAAGTC
CTGTTGTGTCTTGTGTACGTGTGTGTCTTGTATACCCTTTTTCAGTGTGG
AAGCCTCAGCTTTCATTCATGATTGACACGTCGGTTTGTCCATGTGCGTG
ACAATGTGTCTGGCTGTCGTGTCGTGTGTATGTGTTGTGTATGTGTTGTG
TATGTGTTGTGTTTTGTATGTGTACATTGTTTTGCTTGAGCACAACTAAG
TTTTGGGGGTGAGCTTCTTGTACTGCAAAGGTTCTGGCCTATTTCGGAGT
TCCCCTTTGTAGCCTTGGGTTCTACTGCATCAAGCTTCCAAACAAGAAAG
AAAATCAGACGCGTATTTGTGACAAAGCTAGTAGAGCTGTGCGAGTAAAC
ACCGCAACAATCAATTTCTTTTGTACAACG
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protein sequence of NO06G00290.1

>NO06G00290.1-protein ID=NO06G00290.1-protein|Name=NO06G00290.1|organism=Nannochloropsis oceanica|type=polypeptide|length=202bp
MRRALSLVALGVTLALTAAETAPTLILTSIKAVDTTRANKDQWSVKGYFN
DPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKV
TGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEFENTLS
SPLIAAFGIEGADEISDINYKCTEKVGTRATKFLCTPGTAPPTAAPTSGP
P*
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Synonyms
Publications