NO06G00260, NO06G00260 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO06G00260 vs. NCBI_GenBank
Match: EWM30045.1 (hypothetical protein Naga_101600g1 [Nannochloropsis gaditana]) HSP 1 Score: 120.9 bits (302), Expect = 4.600e-24 Identity = 77/193 (39.90%), Postives = 114/193 (59.07%), Query Frame = 0 Query: 1 MRRALSLVALGVTLALTAAETAPTLILTSIKAVDTTRANKDQWSVKGYLNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEFENTLSSPLIAAFGIE---GADEISDINYKCTE--KVGTRATKFLCTPG 189 MRR LSL+ALGVTL +TA + L ++K + ++ +DQWS+KG L++P N + A G GLT L + + D ++ T F A +C+LL N +GV CK GAR+S+KRT+R PK A + ++ N+ + YY SG+FRR +F L P++ ++ G+ + I C+E K R TK CTPG Sbjct: 1 MRRILSLLALGVTLVMTAGQ---EFTLKNVKVAERSKTARDQWSMKGNLDNPAMNVVPAIGQLGLTVNLLDVSLDPLASTAFAATNCKLLRNGRGVRCKKMGARVSIKRTRR-PKGAKV---KSSNSNSTGGYYGASGMFRRLQF---LQDPVVTPLTVQVVVGSTTLPAIVSTCSERTKGAGRITKITCTPG 183
BLAST of NO06G00260 vs. NCBI_GenBank
Match: EWM22002.1 (hypothetical protein Naga_100353g5 [Nannochloropsis gaditana]) HSP 1 Score: 117.1 bits (292), Expect = 6.700e-23 Identity = 78/189 (41.27%), Postives = 105/189 (55.56%), Query Frame = 0 Query: 1 MRRALSLVALGVTLALTAAETAPTLILTSIKAVDTTRANKDQWSVKGYLNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEF-ENTLSSPLIAAFGIEGADEISDINYKCTEKVGTRATKFLCTPG 189 MRR LSL+ALG+TLALT T L L SIK + T+ NKD+WS+K +L DP + G +GLT L + +DT+ F A DC + N KG CK+ GAR+S+ R + PK V ++ N+T YY VSG FRR + E+ + PL A + G +S C+ K GT+ K C PG Sbjct: 80 MRRGLSLLALGLTLALT---TGQMLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSI-RASKPPKG----VGKSHNST--GGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVK-GTKTRKVTCVPG 257
BLAST of NO06G00260 vs. NCBI_GenBank
Match: EWM22004.1 (hypothetical protein Naga_100353g6 [Nannochloropsis gaditana]) HSP 1 Score: 117.1 bits (292), Expect = 6.700e-23 Identity = 78/189 (41.27%), Postives = 105/189 (55.56%), Query Frame = 0 Query: 1 MRRALSLVALGVTLALTAAETAPTLILTSIKAVDTTRANKDQWSVKGYLNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEF-ENTLSSPLIAAFGIEGADEISDINYKCTEKVGTRATKFLCTPG 189 MRR LSL+ALG+TLALT T L L SIK + T+ NKD+WS+K +L DP + G +GLT L + +DT+ F A DC + N KG CK+ GAR+S+ R + PK V ++ N+T YY VSG FRR + E+ + PL A + G +S C+ K GT+ K C PG Sbjct: 11 MRRGLSLLALGLTLALT---TGQMLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSI-RASKPPKG----VGKSHNST--GGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVK-GTKTRKVTCVPG 188
BLAST of NO06G00260 vs. NCBI_GenBank
Match: EWM22005.1 (hypothetical protein Naga_100353g3 [Nannochloropsis gaditana]) HSP 1 Score: 115.2 bits (287), Expect = 2.500e-22 Identity = 75/189 (39.68%), Postives = 102/189 (53.97%), Query Frame = 0 Query: 1 MRRALSLVALGVTLALTAAETAPTLILTSIKAVDTTRANKDQWSVKGYLNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEF-ENTLSSPLIAAFGIEGADEISDINYKCTEKVGTRATKFLCTPG 189 MRR LSL+ALG+TLALT T L L SIK + TR NKD+WS+KG L DP + G +GLT L + +DT+ F A DC + N KG CK+ GAR+S+ R + PK + + + YY VSG FR + E+ + SPL A ++G +S C+ + G T+ C PG Sbjct: 68 MRRGLSLLALGLTLALT---TGQMLSLKSIKTFERTRMNKDKWSMKGNLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTASFAAGDCMVRKNSKGAKCKMMGARVSI-RASKPPKGVKV-----KTYNSTGGYYSVSGSFRGVQLQEDPVISPLTAELTVQGVGTLSQTLTDCSVR-GAGTTRTTCVPG 246
BLAST of NO06G00260 vs. NCBI_GenBank
Match: XP_005852576.1 (hypothetical protein NGA_0721300 [Nannochloropsis gaditana CCMP526] >EKU23255.1 hypothetical protein NGA_0721300 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 114.4 bits (285), Expect = 4.300e-22 Identity = 77/189 (40.74%), Postives = 104/189 (55.03%), Query Frame = 0 Query: 1 MRRALSLVALGVTLALTAAETAPTLILTSIKAVDTTRANKDQWSVKGYLNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEF-ENTLSSPLIAAFGIEGADEISDINYKCTEKVGTRATKFLCTPG 189 MRR LSL+ALG+TLALT T L L SIK + T+ NKD+WS+KG+L DP + G GLT L + DT+ F A DC + + KG CK+ GAR+S+ R + PK V ++ N+T Y+ VSG FRR + E+ + PL A + G +S C+ K GT+ K C PG Sbjct: 1 MRRGLSLLALGLTLALT---TGQMLSLKSIKTFERTQMNKDKWSMKGHLEDPTLAVVSGIGTNGLTVTLLDMAADTLDTASFAAGDCMVRKSSKGARCKMMGARVSI-RASKPPKG----VGKSHNST--GGYFSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVK-GTKTRKVTCVPG 178
BLAST of NO06G00260 vs. NCBI_GenBank
Match: EWM30036.1 (hypothetical protein Naga_100179g1 [Nannochloropsis gaditana]) HSP 1 Score: 114.0 bits (284), Expect = 5.700e-22 Identity = 73/192 (38.02%), Postives = 107/192 (55.73%), Query Frame = 0 Query: 1 MRRALSLVALGVTLALTAAETAPTLILTSIKAVDTTRANKDQWSVKGYLNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEF-ENTLSSPLIAAFGIEGAD-EISDINYKCTEKV--GTRATKFLCTPG 189 MRRA L+ALG+TL +TA + T L ++K +D ++ +DQWS+KG L+DP + G GLT L + T+ T F A DC+L N +GV CK GAR+S+K ++R PK A ++ N N + YY SG+FRR +F ++ + PL + S + C+EK+ R T+ CTPG Sbjct: 20 MRRAFFLLALGITLVMTAGQDLFT--LKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRR-PKGAYVQ---NSNYNSTGGYYSASGMFRRLQFLQDPIVFPLTVVLNVPSIPFPPSAMVSSCSEKIKGAGRTTRITCTPG 205
BLAST of NO06G00260 vs. NCBI_GenBank
Match: XP_005855033.1 (hypothetical protein NGA_0415500 [Nannochloropsis gaditana CCMP526] >EKU21331.1 hypothetical protein NGA_0415500 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 113.6 bits (283), Expect = 7.400e-22 Identity = 73/192 (38.02%), Postives = 107/192 (55.73%), Query Frame = 0 Query: 1 MRRALSLVALGVTLALTAAETAPTLILTSIKAVDTTRANKDQWSVKGYLNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEF-ENTLSSPLIAAFGIEGAD-EISDINYKCTEKV--GTRATKFLCTPG 189 MRRA L+ALG+TL +TA + T L ++K +D ++ +DQWS+KG L+DP + G GLT L + T+ T F A DC+L N +GV CK GAR+S+K ++R PK A ++ N N + YY SG+FRR +F ++ + PL + S + C+EK+ R T+ CTPG Sbjct: 1 MRRAFFLLALGITLVMTAGQDLFT--LKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRR-PKGANVQ---NSNYNSTGGYYSASGMFRRLQFLQDPIVFPLTVVLNVPSIPFPPSAMVSSCSEKIKGAGRTTRITCTPG 186
BLAST of NO06G00260 vs. NCBI_GenBank
Match: EWM20521.1 (hypothetical protein Naga_100335g8, partial [Nannochloropsis gaditana]) HSP 1 Score: 112.5 bits (280), Expect = 1.600e-21 Identity = 76/192 (39.58%), Postives = 106/192 (55.21%), Query Frame = 0 Query: 1 MRRALSLVALGVTLALTAAETA-PTLILTSIKAVDTTRANKDQWSVKGYLNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEF-ENTLSSPLIAAFGIEGADEISDINYKCTE--KVGTRATKFLCTPG 189 MR LSL+ALG+TL T TA L L SI+AVD + NKD W +KG +NDP + A G TGLT L + D ++ F A DCR+ + + CK+ GAR+S+KR++R PK + ++ + YY V+G FR F EN + SPL AA + G+ +SD C + + R+T C PG Sbjct: 1 MRSPLSLLALGITLGSTLVTTAGQDLNLKSIRAVDRSVTNKDTWKMKGNINDPSLTFVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRAACKIRGARVSIKRSRR-PKIKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALRVNGS-VLSDTLISCYDLARKSARSTISQCEPG 190
BLAST of NO06G00260 vs. NCBI_GenBank
Match: EWM20105.1 (hypothetical protein Naga_101776g1 [Nannochloropsis gaditana]) HSP 1 Score: 110.9 bits (276), Expect = 4.800e-21 Identity = 69/178 (38.76%), Postives = 107/178 (60.11%), Query Frame = 0 Query: 1 MRRALSLVALGVTLALTAAETAPTLILTSIKAVDTTRANKDQWSVKGYLNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEFENTLSSPLIAAFGIE---GADEISDINYKCTEK 176 MRR LSL+ALGVTL +TA + L ++K + ++ +DQWS+KG L++P N + A G GLT L + + D ++ T F A +C+LL N +GV CK GAR+S+KRT+R PK A + ++ N+ + YY SG+FRR +F L P++ ++ G+ + I C+E+ Sbjct: 37 MRRILSLLALGVTLVMTAGQ---EFTLKNVKVAERSKTARDQWSMKGNLDNPAMNVVPAIGQLGLTVNLLDVSLDPLASTAFAATNCKLLRNGRGVSCKKMGARVSIKRTRR-PKGAKV---KSSNSNSTGGYYGASGMFRRLQF---LQDPVVTPVTVQVKVGSTTLPAIVSTCSER 204
BLAST of NO06G00260 vs. NCBI_GenBank
Match: EWM20135.1 (hypothetical protein Naga_101626g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 106.3 bits (264), Expect = 1.200e-19 Identity = 71/190 (37.37%), Postives = 107/190 (56.32%), Query Frame = 0 Query: 1 MRRALSLVALGVTLALTAAETAPTLILTSIKAVDTTRANKDQWSVKGYLNDPDGNAILAFGDTGLTALLANGNEDTVSETDFDADDCRLLNNDKGVICKVTGARLSLKRTKRVPKDAMLEVQRNRNTTTASSYYRVSGVFRRQEF-ENTLSSPLIAAFGIEGADEISDINYKCTE--KVGTRATKFLCTP 188 MR LSL+ALG+TL +TA + L +IK + +DQWS+KG L++P N + G +GLT L + + ++ F A +C+LL N +GV CK GAR+ +KRT+R PK A + ++ + + YY SG+FRR +F ++T+ +PL + G + I C+E K R TK CTP Sbjct: 1 MRCILSLLALGITLVMTAGQ---EFTLKNIKVAGRFKTARDQWSMKGNLDNPTMNVVPVIGQSGLTVNLLDASLSPLASAAFAATNCKLLRNARGVSCKSMGARVYIKRTRR-PKAAKV---KSSSYNSTGGYYAASGMFRRLQFLQDTVVTPLTVQL-VVGTTTLPAIVSTCSERTKSAGRITKITCTP 182 The following BLAST results are available for this feature:
BLAST of NO06G00260 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 17
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G00260 ID=NO06G00260|Name=NO06G00260|organism=Nannochloropsis oceanica|type=gene|length=633bpback to top protein sequence of NO06G00260.1 >NO06G00260.1-protein ID=NO06G00260.1-protein|Name=NO06G00260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=211bpback to top Synonyms
Publications
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