NO06G00230, NO06G00230 (gene) Nannochloropsis oceanica

Overview
NameNO06G00230
Unique NameNO06G00230
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2416
Alignment locationchr6:93873..96288 +

Link to JBrowse

Properties
Property NameValue
Descriptiontubulin folding cofactor B
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:93873..96288 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-rel_dom
IPR036859CAP-Gly_dom_sf
IPR000626Ubiquitin-like
IPR000938CAP-Gly_domain
Homology
[Close]
BLAST of NO06G00230 vs. NCBI_GenBank
Match: ETI42435.1 (hypothetical protein F443_12434 [Phytophthora parasitica P1569] >ETK82453.1 hypothetical protein L915_12159 [Phytophthora parasitica] >ETL35837.1 hypothetical protein L916_12084 [Phytophthora parasitica] >ETL89077.1 hypothetical protein L917_11919 [Phytophthora parasitica] >ETM42332.1 hypothetical protein L914_11992 [Phytophthora parasitica] >ETO71053.1 hypothetical protein F444_12536 [Phytophthora parasitica P1976] >ETP12149.1 hypothetical protein F441_12420 [Phytophthora parasitica CJ01A1] >ETP40267.1 hypothetical protein F442_12356 [Phytophthora parasitica P10297] >KUF75382.1 Tubulin-folding cofactor B [Phytophthora nicotianae] >KUF90458.1 hypothetical protein AM588_10003099 [Phytophthora nicotianae])

HSP 1 Score: 263.8 bits (673), Expect = 6.800e-67
Identity = 133/261 (50.96%), Postives = 171/261 (65.52%), Query Frame = 0 
Query:   40 IQALRDYLVAGDAVRYDLLPKGVVMVGVTHSNLGMSMPDIRLDLHTSIDSVKEKLYTHCGTKPQHQRLFLKRDSGDSTMLPLSDDSKKLGYYSVESGMCIHVVDDDPYSLSKHGGLEDVSKVEKYTMSEEDYDKRKGTLREWVKEQKAKDEKWKAPXXXXXXXXXXXXXXXXXXXXPPPGPESMEGWKVGQRCECQPGGRRGTIMYMGQVEAAGAGCWVGVQLDEPVGRNDGSTKDGQRYFTCQEKFGTFVRPRNITVGDF 301
            ++ALRDY+ A D  +YD +P+GVV + +THSNL + M DIRLDLH +I  ++ KLY H GTKP    L + R  G S    L DD + LG+YS+E+GM +HVVD DP+SLSK GGLEDVS V+KY +SEEDY+KR+ T+R + +EQ AKD  WK                        PGPE++   KVG RCE QPGGRRG + Y+G++     G WVGVQ DEPVG+ DGS K G  YF C++K+G F+RP N+ VGDF
Sbjct:    5 MRALRDYVTAMDGHQYDNVPEGVVCLLITHSNLQLQMVDIRLDLHGTIGELRHKLYQHTGTKPDAMELLVMRSDG-SVYARLDDDQRMLGFYSLENGMRLHVVDKDPFSLSKGGGLEDVSLVKKYEISEEDYNKREKTVRAYKREQLAKDPNWKPKAMMNVTKPTVDPAAL-------PGPETVVNLKVGDRCEVQPGGRRGQVQYLGEIPEIAPGYWVGVQFDEPVGKGDGSVK-GATYFKCEQKYGGFIRPHNVAVGDF 256
[Close]
BLAST of NO06G00230 vs. NCBI_GenBank
Match: XP_008908769.1 (hypothetical protein PPTG_14027 [Phytophthora parasitica INRA-310] >ETN06267.1 hypothetical protein PPTG_14027 [Phytophthora parasitica INRA-310])

HSP 1 Score: 263.1 bits (671), Expect = 1.200e-66
Identity = 133/261 (50.96%), Postives = 171/261 (65.52%), Query Frame = 0 
Query:   40 IQALRDYLVAGDAVRYDLLPKGVVMVGVTHSNLGMSMPDIRLDLHTSIDSVKEKLYTHCGTKPQHQRLFLKRDSGDSTMLPLSDDSKKLGYYSVESGMCIHVVDDDPYSLSKHGGLEDVSKVEKYTMSEEDYDKRKGTLREWVKEQKAKDEKWKAPXXXXXXXXXXXXXXXXXXXXPPPGPESMEGWKVGQRCECQPGGRRGTIMYMGQVEAAGAGCWVGVQLDEPVGRNDGSTKDGQRYFTCQEKFGTFVRPRNITVGDF 301
            ++ALRDY+ A D  +YD +P+GVV + +THSNL + M DIRLDLH +I  ++ KLY H GTKP    L + R  G S    L DD + LG+YS+E+GM +HVVD DP+SLSK GGLEDVS V+KY +SEEDY+KR+ T+R + +EQ AKD  WK                        PGPE++   KVG RCE QPGGRRG + Y+G++     G WVGVQ DEPVG+ DGS K G  YF C++K+G F+RP N+ VGDF
Sbjct:    5 MRALRDYVTAMDGHQYDNVPEGVVCLLITHSNLQLQMVDIRLDLHGTIGELRHKLYQHTGTKPDAMELLVIRSDG-SVYARLDDDQRMLGFYSLENGMRLHVVDKDPFSLSKGGGLEDVSLVKKYEISEEDYNKREKTVRAYKREQLAKDPNWKPKAMMNVTKPTVDPAAL-------PGPETVVNLKVGDRCEVQPGGRRGQVQYLGEIPEIAPGYWVGVQFDEPVGKGDGSVK-GATYFKCEQKYGGFIRPHNVAVGDF 256
[Close]
BLAST of NO06G00230 vs. NCBI_GenBank
Match: XP_024582048.1 (Alpha-tubulin folding cofactor B [Plasmopara halstedii] >CEG45679.1 Alpha-tubulin folding cofactor B [Plasmopara halstedii])

HSP 1 Score: 262.3 bits (669), Expect = 2.000e-66
Identity = 133/261 (50.96%), Postives = 172/261 (65.90%), Query Frame = 0 
Query:   40 IQALRDYLVAGDAVRYDLLPKGVVMVGVTHSNLGMSMPDIRLDLHTSIDSVKEKLYTHCGTKPQHQRLFLKRDSGDSTMLPLSDDSKKLGYYSVESGMCIHVVDDDPYSLSKHGGLEDVSKVEKYTMSEEDYDKRKGTLREWVKEQKAKDEKWKAPXXXXXXXXXXXXXXXXXXXXPPPGPESMEGWKVGQRCECQPGGRRGTIMYMGQVEAAGAGCWVGVQLDEPVGRNDGSTKDGQRYFTCQEKFGTFVRPRNITVGDF 301
            ++ALR Y+ A D  +YD +P+ VV + +THSNL + M DIRLDLH++I  ++ KLY H G+KP    L + R  G S    L DD+K LG+Y+VE+G+ +H+VD DPYSLS+ GGLEDVS V+KY MSEEDY+KR+ T+R + KEQ AKD  WK                        PGPES+   KVG RCE QPGGR G + Y+G+V     G WVGVQ DEPVG++DGS K G+ YF CQ+K+G FVRP N+T G+F
Sbjct:    5 MRALRQYVTAMDGHQYDNVPETVVCLLITHSNLKLQMVDIRLDLHSTIGELRHKLYQHTGSKPDAMELLIMRSDG-SVHAHLEDDNKMLGFYNVENGLRLHIVDKDPYSLSRRGGLEDVSLVKKYEMSEEDYNKREKTVRAYKKEQLAKDPNWKPKTMMNVSHTAADPITR-------PGPESVANMKVGDRCEVQPGGRLGQVQYLGEVSEIAPGYWVGVQFDEPVGKSDGSVK-GKAYFRCQQKYGGFVRPHNVTNGEF 256
[Close]
BLAST of NO06G00230 vs. NCBI_GenBank
Match: OWZ23251.1 (Tubulin-specific chaperone B [Phytophthora megakarya])

HSP 1 Score: 258.1 bits (658), Expect = 3.700e-65
Identity = 131/261 (50.19%), Postives = 172/261 (65.90%), Query Frame = 0 
Query:   40 IQALRDYLVAGDAVRYDLLPKGVVMVGVTHSNLGMSMPDIRLDLHTSIDSVKEKLYTHCGTKPQHQRLFLKRDSGDSTMLPLSDDSKKLGYYSVESGMCIHVVDDDPYSLSKHGGLEDVSKVEKYTMSEEDYDKRKGTLREWVKEQKAKDEKWKAPXXXXXXXXXXXXXXXXXXXXPPPGPESMEGWKVGQRCECQPGGRRGTIMYMGQVEAAGAGCWVGVQLDEPVGRNDGSTKDGQRYFTCQEKFGTFVRPRNITVGDF 301
            ++ALR Y+ A D  +YD +P+GVV + +THSNL + M DIRLDLH ++  ++ KLY H GTKP    L + R  G S    L +D + LG+YSV +GM +HVVD DP+SLSK GGLEDVS V+KY +SEEDY+KR+ T+R + +EQ AKD  WK                        PGPE++   KVG RCE QPGGRRG + Y+G++     G WVGVQ DEPVG+++GS K G  YFTC++K+G FVRP+N+ VGDF
Sbjct:    5 MRALRAYVTAMDGHQYDNVPEGVVCLLITHSNLKLQMVDIRLDLHGTVGELRHKLYQHTGTKPDAMDLLVMRSDG-SVHARLDEDQRLLGFYSVVNGMRLHVVDKDPFSLSKGGGLEDVSLVQKYEISEEDYNKREKTVRAYKREQLAKDPNWKPKTMMNVTRPAVDPASL-------PGPETVADMKVGDRCEVQPGGRRGQVQYLGEIPEIAPGYWVGVQFDEPVGKSNGSVK-GATYFTCEQKYGGFVRPQNVAVGDF 256
[Close]
BLAST of NO06G00230 vs. NCBI_GenBank
Match: XP_002895417.1 (tubulin-specific chaperone B, putative [Phytophthora infestans T30-4] >EEY56721.1 tubulin-specific chaperone B, putative [Phytophthora infestans T30-4])

HSP 1 Score: 256.1 bits (653), Expect = 1.400e-64
Identity = 129/261 (49.43%), Postives = 171/261 (65.52%), Query Frame = 0 
Query:   40 IQALRDYLVAGDAVRYDLLPKGVVMVGVTHSNLGMSMPDIRLDLHTSIDSVKEKLYTHCGTKPQHQRLFLKRDSGDSTMLPLSDDSKKLGYYSVESGMCIHVVDDDPYSLSKHGGLEDVSKVEKYTMSEEDYDKRKGTLREWVKEQKAKDEKWKAPXXXXXXXXXXXXXXXXXXXXPPPGPESMEGWKVGQRCECQPGGRRGTIMYMGQVEAAGAGCWVGVQLDEPVGRNDGSTKDGQRYFTCQEKFGTFVRPRNITVGDF 301
            ++ALR Y+ A D  +Y+ +P+GVV + +TH+NL + M DIR+DLH +I  ++ KLY H GTKP    L + R  G S    L DD++ LG+YS+E+GM +HVVD DP+SLSK GGLEDVS V+KY +SEEDY+KR+ T+R + KEQ AKD  WK                        PGP+++   KVG RCE QPGGRRG + Y+G++     G WVGV  DEPVG+ DGS K G+ YF C++K+G FVRP N+ VGDF
Sbjct:    5 MRALRSYVTAMDDHQYENMPEGVVCLLITHNNLKLQMVDIRVDLHGTIGELRHKLYQHTGTKPDAMELLVMRSDG-SVYARLDDDARMLGFYSLENGMRLHVVDKDPFSLSKGGGLEDVSLVKKYEISEEDYNKREKTVRAYKKEQLAKDPNWKPKVMMNVTKPAVDPATL-------PGPDTIANMKVGDRCEVQPGGRRGQVHYLGEISEIAPGYWVGVHFDEPVGKGDGSVK-GEIYFKCEQKYGGFVRPYNVAVGDF 256
[Close]
BLAST of NO06G00230 vs. NCBI_GenBank
Match: XP_008618154.1 (hypothetical protein SDRG_13834 [Saprolegnia diclina VS20] >EQC28506.1 hypothetical protein SDRG_13834 [Saprolegnia diclina VS20])

HSP 1 Score: 254.2 bits (648), Expect = 5.400e-64
Identity = 131/265 (49.43%), Postives = 171/265 (64.53%), Query Frame = 0 
Query:   40 IQALRDYLVAGDAVRYDLLPKGVVMVGVTHSNLGMSMPDIRLDLHTSIDSVKEKLYTHCGTKPQHQRLFLKRDSGDSTMLPLSDDSKKLGYYSVESGMCIHVVDDDPYSLSKHGGLEDVSKVEKYTMSEEDYDKRKGTLREWVKEQKAKDEKWKAPXXXXXXXXXXXXXXXXXXXXPPPGPESMEGWKVGQRCECQPGGRRGTIMYMGQVE----AAGAGCWVGVQLDEPVGRNDGSTKDGQRYFTCQEKFGTFVRPRNITVGDF 301
            ++ALR+Y+ A D   Y  +  G+V V +THS+L  S+ DIRLD+H +I  VKEK+Y HCGTKP +  L LK  +G S +  L D+++KLGYY V+ GM +HV D+DP+SLSK GGL+DVS V+KY +SEEDYDKR+ T+R + +EQ AKD  WK P                         ES++G ++G RCE  PGGRRG + +MG V     A G   WVGV  DEPVG+ +G  K G+RYF C EKFG F+RP N+TVGDF
Sbjct:    5 LRALRNYITAKDGYEYTGVADGLVCVHITHSHLQRSIVDIRLDMHATIGEVKEKIYRHCGTKPDYMTLILK--NGSSAVGILDDENRKLGYYPVQHGMTLHVQDNDPFSLSKGGGLDDVSLVQKYEISEEDYDKRQNTVRNYKREQLAKDPNWKPPVLPGASKANRAASEIVF------DAESVKGIEIGNRCEVNPGGRRGRVAFMGTVAELAGAPGESYWVGVVFDEPVGKGNGCAK-GKRYFDCAEKFGGFIRPNNVTVGDF 260
[Close]
BLAST of NO06G00230 vs. NCBI_GenBank
Match: OQS07021.1 (tubulin-specific chaperone B [Thraustotheca clavata])

HSP 1 Score: 253.8 bits (647), Expect = 7.000e-64
Identity = 131/265 (49.43%), Postives = 171/265 (64.53%), Query Frame = 0 
Query:   40 IQALRDYLVAGDAVRYDLLPKGVVMVGVTHSNLGMSMPDIRLDLHTSIDSVKEKLYTHCGTKPQHQRLFLKRDSGDSTMLPLSDDSKKLGYYSVESGMCIHVVDDDPYSLSKHGGLEDVSKVEKYTMSEEDYDKRKGTLREWVKEQKAKDEKWKAPXXXXXXXXXXXXXXXXXXXXPPPGPESMEGWKVGQRCECQPGGRRGTIMYMGQVEAAGAGC----WVGVQLDEPVGRNDGSTKDGQRYFTCQEKFGTFVRPRNITVGDF 301
            ++ALR Y+ A D + Y  +  GVV + +THSNL  +M DIRLD+H++I  VKEK+Y HCGTKP +  L LK  +G S +  L D+++KLGYY V+ GM +HV D+DP+SL+K GGLEDVS V+KY +SEEDYDKR+ T+R + +EQ AKD  WK P                         ES++G+ VG RCE  PGGRRG + Y+G V   G       W+GV  DEPVG+ +G  K G+RYF C EKFG F+RP N+TVGDF
Sbjct:    5 MRALRQYVTAMDGLEYSGVADGVVCMRITHSNLKSAMVDIRLDMHSTIAEVKEKVYRHCGTKPGYMTLILK--NGSSVVGILDDENRKLGYYPVQHGMTLHVQDNDPFSLAKGGGLEDVSLVKKYEISEEDYDKREKTVRNYKREQLAKDPNWKPPVLPGAGASTSSEPVVF-------DAESVKGFSVGNRCEVNPGGRRGRVAYVGTVPELGGSSAESYWIGVVFDEPVGKGNGCAK-GKRYFECSEKFGGFIRPSNVTVGDF 259
[Close]
BLAST of NO06G00230 vs. NCBI_GenBank
Match: XP_008876433.1 (hypothetical protein H310_11508 [Aphanomyces invadans] >ETV94842.1 hypothetical protein H310_11508 [Aphanomyces invadans])

HSP 1 Score: 253.1 bits (645), Expect = 1.200e-63
Identity = 134/265 (50.57%), Postives = 171/265 (64.53%), Query Frame = 0 
Query:   40 IQALRDYLVAGDAVRYDLLPKGVVMVGVTHSNLGMSMPDIRLDLHTSIDSVKEKLYTHCGTKPQHQRLFLKRDSGDSTMLPLSDDSKKLGYYSVESGMCIHVVDDDPYSLSKHGGLEDVSKVEKYTMSEEDYDKRKGTLREWVKEQKAKDEKWKAPXXXXXXXXXXXXXXXXXXXXPPPGPESMEGWKVGQRCECQPGGRRGTIMYMGQV-EAAGA---GCWVGVQLDEPVGRNDGSTKDGQRYFTCQEKFGTFVRPRNITVGDF 301
            ++ALRDY+ A D   Y  +  G+V + +THSNL  ++ DIRLDLH ++  VKEK+Y HCGTKP +  L LK  SG + +  L D+ + LGYY V+ GM +HVVD+DP+SL+K GGLEDVS V+KY +SEEDYDKRK T+R + KEQ AKD  WK P                       GPE++ G +VG RCE  PGGRRG + Y+G V E A +   G WVGV  DEPVG+ +G  K G RY+ C EKFG F+RP N+ VGDF
Sbjct:    5 MRALRDYVTAKDGYEYAEVSDGLVCLHITHSNLRATIVDIRLDLHMTLAQVKEKVYRHCGTKPDYMTLILK--SGSTVIGTLDDERRMLGYYPVQHGMTLHVVDNDPFSLAKGGGLEDVSLVKKYEISEEDYDKRKNTVRNYKKEQLAKDPNWKPPVLMGAGLRGVKNDY---------GPETVAGIEVGMRCEVAPGGRRGRVAYVGVVPELASSEVGGHWVGVVFDEPVGKGNGCVK-GTRYYDCLEKFGGFIRPPNVAVGDF 257
[Close]
BLAST of NO06G00230 vs. NCBI_GenBank
Match: XP_012208868.1 (hypothetical protein SPRG_14350 [Saprolegnia parasitica CBS 223.65] >KDO20412.1 hypothetical protein SPRG_14350 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 247.7 bits (631), Expect = 5.000e-62
Identity = 128/265 (48.30%), Postives = 170/265 (64.15%), Query Frame = 0 
Query:   40 IQALRDYLVAGDAVRYDLLPKGVVMVGVTHSNLGMSMPDIRLDLHTSIDSVKEKLYTHCGTKPQHQRLFLKRDSGDSTMLPLSDDSKKLGYYSVESGMCIHVVDDDPYSLSKHGGLEDVSKVEKYTMSEEDYDKRKGTLREWVKEQKAKDEKWKAPXXXXXXXXXXXXXXXXXXXXPPPGPESMEGWKVGQRCECQPGGRRGTIMYMGQVE----AAGAGCWVGVQLDEPVGRNDGSTKDGQRYFTCQEKFGTFVRPRNITVGDF 301
            ++ALR+Y+ A D   Y  +  G+V V +THS+L  S+ DIRLD+H +I  VKEK+Y HCGTKP +  L LK  +G S +  L D+++KLGYY V+ GM +HV D+DP+SLSK GGL+DVS V+KY +SEEDYDKR+ T+R + +EQ AKD  WK                           ES++G ++G RCE +PGGRRG + ++G V     A G   WVGV  DEPVG+ +G  K G+RYF C EKFG F+RP N+ VGDF
Sbjct:    5 LRALRNYITAKDGYEYTGVADGLVCVHITHSHLQRSIVDIRLDMHATIGEVKEKIYRHCGTKPDYMTLILK--NGSSAVGILDDENRKLGYYPVQHGMTLHVQDNDPFSLSKGGGLDDVSLVQKYEISEEDYDKRQNTVRNYKREQLAKDPNWKPKVLPGASKANRAGSDVVC------DAESVKGIEIGNRCEVKPGGRRGRVAFVGTVAELAGAPGESYWVGVVFDEPVGKGNGCAK-GKRYFDCAEKFGGFIRPNNVIVGDF 260
[Close]
BLAST of NO06G00230 vs. NCBI_GenBank
Match: XP_009530731.1 (hypothetical protein PHYSODRAFT_259289 [Phytophthora sojae] >EGZ13302.1 hypothetical protein PHYSODRAFT_259289 [Phytophthora sojae])

HSP 1 Score: 246.5 bits (628), Expect = 1.100e-61
Identity = 128/261 (49.04%), Postives = 167/261 (63.98%), Query Frame = 0 
Query:   40 IQALRDYLVAGDAVRYDLLPKGVVMVGVTHSNLGMSMPDIRLDLHTSIDSVKEKLYTHCGTKPQHQRLFLKRDSGDSTMLPLSDDSKKLGYYSVESGMCIHVVDDDPYSLSKHGGLEDVSKVEKYTMSEEDYDKRKGTLREWVKEQKAKDEKWKAPXXXXXXXXXXXXXXXXXXXXPPPGPESMEGWKVGQRCECQPGGRRGTIMYMGQVEAAGAGCWVGVQLDEPVGRNDGSTKDGQRYFTCQEKFGTFVRPRNITVGDF 301
            ++ALRDY+ A D  +Y+ +P+GVV + +THSNL + M DIRLDLH +I  ++ K+Y H GTKP    L + R  G S    L DD + LG+YSVE+GM +HVVD DP+SLS+ GGLEDVS V+KY +SEEDY+KR+ T+R + ++Q AKD  WK                      P   P +     VG RCE QPGGRRG + Y+G++     G WVGVQ DEPVG+ +GS K G  YF C++KFG FVRP N+ VGDF
Sbjct:    5 MRALRDYVTAMDGRQYESVPEGVVCLLITHSNLKLQMVDIRLDLHGTIGELRHKVYQHTGTKPDAMELLVMRSDG-SVYARLDDDRRMLGFYSVENGMRLHVVDKDPFSLSRGGGLEDVSLVKKYEISEEDYNKREKTVRAYKRKQLAKDPNWK-------------PKTMMNAARPAADPAA-----VGDRCEVQPGGRRGQVQYLGEIPEIAPGYWVGVQFDEPVGKGNGSVK-GTTYFKCEQKFGGFVRPHNVAVGDF 245
The following BLAST results are available for this feature:
BLAST of NO06G00230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
ETI42435.16.800e-6750.96hypothetical protein F443_12434 [Phytophthora para... [more]
XP_008908769.11.200e-6650.96hypothetical protein PPTG_14027 [Phytophthora para... [more]
XP_024582048.12.000e-6650.96Alpha-tubulin folding cofactor B [Plasmopara halst... [more]
OWZ23251.13.700e-6550.19Tubulin-specific chaperone B [Phytophthora megakar... [more]
XP_002895417.11.400e-6449.43tubulin-specific chaperone B, putative [Phytophtho... [more]
XP_008618154.15.400e-6449.43hypothetical protein SDRG_13834 [Saprolegnia dicli... [more]
OQS07021.17.000e-6449.43tubulin-specific chaperone B [Thraustotheca clavat... [more]
XP_008876433.11.200e-6350.57hypothetical protein H310_11508 [Aphanomyces invad... [more]
XP_012208868.15.000e-6248.30hypothetical protein SPRG_14350 [Saprolegnia paras... [more]
XP_009530731.11.100e-6149.04hypothetical protein PHYSODRAFT_259289 [Phytophtho... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR016ncniR016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G00230.1NO06G00230.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO06G00230.2NO06G00230.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|73985gene_12044Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G00230.1NO06G00230.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO06G00230.2NO06G00230.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G00230 ID=NO06G00230|Name=NO06G00230|organism=Nannochloropsis oceanica|type=gene|length=2416bp
ACATACAGGCACATTTAAAGTACCAGGAAAGGATGCATCCCGGCGTGGCT
CCTCCGAGGAGGCTGCACCAGGACGCACAGgtaggcgaaacgtctaatga
ccatgcagtgctgaaaaagatggagggcagggcatttgtcgcgtctggtg
gtcgagcgaaagagaaggagtaagattattgggagcatgaaaaaacaagc
acgttatcgtgggcatgcattctgccccgttgcctttagagcccttttct
cgttctcaacccttccttcttcttatttattttatccttttcctctcttc
cctatccagGCCCTCCGCGACTACCTCGTGGCAGGTGACGCCGTGCGGTA
TGATTTGCTCCCTAAGGGCGTGGTGATGGTGGGTGTCACGCATTCCAACC
TTGGCATGTCCATGCCCGACATTCGCCTCGATCTGCACACGTCGgtacgt
ccctccttccctcctcccttccttccctccctttctccctggatctcatt
acctctccgcattcccccctctagATCGATAGTGTCAAGGAAAAGCTCTA
CACCCACTGCGGGACCAAGCCTCAACATCAGCGGCTCTTTCTCAAGCGGG
ACTCGGGCGACAGCACCATGCTCCCCCTCAgtacgtatcccctccttccc
tccctccctccctccttccccccttcctccctccctccctccctcccttt
ccccttcctttcctcctccctccccccagttcatctcatctcttcatcat
attatctcttcttacagGCGATGACTCCAAAAAGTTGGGGTATTACTCCG
TAGAAAGCGGCATGTGCATCCACGTCGTCGATGACgtacgtccctccttc
cctccctccctccctccctcccttgctccctccctccctccttttttgtt
caccctctccctccttccctccctccctccttttattaataaacagGACC
CATATTCCCTCTCCAAGCACGGTGGACTGGAAGACGTTAGCAAGgcatgt
ggaaagcctccctccctccctccctccctccctccctccctcctctcgca
tctcatcgcgtcaatctccctccccacctcttccccctccctccctccct
ccctccctccctccttccctccctcagGTGGAGAAATACACCATGTCGGA
GGAAGACTACGACAAACGCAAGGGCACCCTCAGGGAATGGGTTAAGGAGC
AGAAAGCAAAGGACGAGAAGTGGAAGgtaggccctcccctccctccctcc
ctccctccctcctgccctcctcctcttgcgccctccctcctaccctcccc
ctcttgcgccctccctccgttccctcctttctcctgagaggggctctgtg
cctccataccgtaattgtcctccataccgtaattcccctttcttccctcc
cttcccccccttcccctccctccctccctccctccctccctccccagGCG
CCCTGGACCAAGAAAAAGGACGAGGAGGGGAGGGAGGACGGGAGGGAGGG
CGGGAGGGAGGAGCCTCCCCCCGGGCCGGAGTCGATGGAGGGATGGAAAG
TGGGCCAGCGGTGTGAATGTCAGCCAGgtagagggggagggagggaggga
ggaagggagggaggaaggaagggagggagggagggagcatatatcaatcc
atcgtttcctcgtacattatgtcttgactgctttgtaaattccctccctc
cctccctccctccctcccttcagGCGGGCGACGGGGCACAATCATGTACA
TGGGCCAAGTCGAAGCAGCAGGAGCAGGCTGCTGGgtaagccctccctcc
ctccctccctccttcttattcccttcaccaactccctctctccctccctc
cttccctccctccctcagGTCGGCGTCCAGCTGGACGAGCCTGTCGGACG
CAACGATGGGAGCACCAAAGACGGTCAGCGCTACTTCACCTGTCAGgcac
gtgccctccctccctccctccctccctccctccctccctccctccctccc
ttttctaaacatcttcaactcagcgtggcgggtctttttctggctcacac
ttcttctctacctccctccctccctccctccctctgtcacttcctcagGA
AAAGTTTGGGACTTTCGTGCGACCGAGAAACATCACTGTGGGTGATTTTG
CTGAGAGAGGGCTAGAGGAGGAGGAGGAGGAGGTGGAGGCGGCGGAGGAG
GAAGAGGAGGAGATATAAAGAGAGAGTGAAGGAGGGAGGATAGGGTGGAG
AAAGAGGAGGAGGAGGGGAAGGAAGAGGGAGGAAGAAGGGAAGCAGGGAG
GACGCGCAGGGTGTAACCATGCGCCGAAAAGGAGGATGGAAGGAAGGACG
GGAAGGAAGAAAGGAAGGGAGGAGGCAGGGAGGGGAGGAGGGGAATAGCA
GATAAACGATCCTTAT
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protein sequence of NO06G00230.1

>NO06G00230.1-protein ID=NO06G00230.1-protein|Name=NO06G00230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=323bp
MKKQARYRGHAFCPVAFRALFSFSTLPSSYLFYPFPLFPIQALRDYLVAG
DAVRYDLLPKGVVMVGVTHSNLGMSMPDIRLDLHTSIDSVKEKLYTHCGT
KPQHQRLFLKRDSGDSTMLPLSDDSKKLGYYSVESGMCIHVVDDDPYSLS
KHGGLEDVSKVEKYTMSEEDYDKRKGTLREWVKEQKAKDEKWKAPWTKKK
DEEGREDGREGGREEPPPGPESMEGWKVGQRCECQPGGRRGTIMYMGQVE
AAGAGCWVGVQLDEPVGRNDGSTKDGQRYFTCQEKFGTFVRPRNITVGDF
AERGLEEEEEEVEAAEEEEEEI*
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protein sequence of NO06G00230.2

>NO06G00230.2-protein ID=NO06G00230.2-protein|Name=NO06G00230.2|organism=Nannochloropsis oceanica|type=polypeptide|length=298bp
MHPGVAPPRRLHQDAQALRDYLVAGDAVRYDLLPKGVVMVGVTHSNLGMS
MPDIRLDLHTSIDSVKEKLYTHCGTKPQHQRLFLKRDSGDSTMLPLSDDS
KKLGYYSVESGMCIHVVDDDPYSLSKHGGLEDVSKVEKYTMSEEDYDKRK
GTLREWVKEQKAKDEKWKAPWTKKKDEEGREDGREGGREEPPPGPESMEG
WKVGQRCECQPGGRRGTIMYMGQVEAAGAGCWVGVQLDEPVGRNDGSTKD
GQRYFTCQEKFGTFVRPRNITVGDFAERGLEEEEEEVEAAEEEEEEI*
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Synonyms
Publications