NO06G00210, NO06G00210 (gene) Nannochloropsis oceanica

Overview
NameNO06G00210
Unique NameNO06G00210
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length417
Alignment locationchr6:88421..88837 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:88421..88837 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007011SMP
Homology
The following BLAST results are available for this feature:
BLAST of NO06G00210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR016ncniR016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR147ngnoR147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G00210.1NO06G00210.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|617415gene_12042Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G00210.1NO06G00210.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G00210 ID=NO06G00210|Name=NO06G00210|organism=Nannochloropsis oceanica|type=gene|length=417bp
ATGCCTTTTTTTCATCGCGCCCTCTTTCTCCTCCTCCTCGCTACTATCCT
GCAGACCGGCCGAGTCCAAGCCAAGGGAAAGATAGAAAGAGGAATGAGAG
GAGGAGGGAAGATTGGCTTTGCGAATGCAAACAGGAGCAAAGCACCGAAA
CACATCAGTGGAGGGAAGAAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGGA
AGAAGCACATGCCAATGACATCGGAGGCGGCCCGTCGCGTTCAGTCAGCA
GAGGCCCGGGCAACTGGAGGGGGGGTGGAGAAGGGAGGCTTTGCCGCTCG
TGCGCAGTCAGCCGCGGCGATGCATGAAGGGGAGGAAGGTGCGGGAGGAG
GGTCAAGGGGAAAGTGA
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protein sequence of NO06G00210.1

>NO06G00210.1-protein ID=NO06G00210.1-protein|Name=NO06G00210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=139bp
MPFFHRALFLLLLATILQTGRVQAKGKIERGMRGGGKIGFANANRSKAPK
HISGGKKGGGGGGGGGGGGGGGRGGGGGRGGGGKKHMPMTSEAARRVQSA
EARATGGGVEKGGFAARAQSAAAMHEGEEGAGGGSRGK*
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Synonyms
Publications