NO06G00140, NO06G00140 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G00140 vs. NCBI_GenBank
Match: XP_005777116.1 (Deoxyribodipyrimidine photolyase/cryptochrome [Emiliania huxleyi CCMP1516] >EOD24687.1 Deoxyribodipyrimidine photolyase/cryptochrome [Emiliania huxleyi CCMP1516]) HSP 1 Score: 166.4 bits (420), Expect = 1.300e-37 Identity = 92/206 (44.66%), Postives = 127/206 (61.65%), Query Frame = 0 Query: 1 MKYQHVGRDTEGAYAHIKSFCTDAASEGVREVLLVSGSGPKRKLDPAACLERLSKDKQARGSFLSSLRFGVAFNPYLPEME---EEESRFRAKIATGLVSSVWLQLGSDTAALRKGLDFVRIETEGRSPPIRVIGSVVIPSRKFLAMMKFRPWSGVRLSETYLSSVEEANKATKAILNVYKAYGVEPIVESAVKNEADLEQVKNLL 204 +K+ + RD ++FC +AAS VRE+LLVSGSG R D ACL+ L+ + R + GVAFNP+ P+ E +R R K+ TG VS++WLQ+GSD LR+ L F+ E G P +R+ GSV +PSRK LA +KFRPW+GV LS YLSSVE A+ T +L+ Y +GVEP++ESAV++ A+ + L Sbjct: 69 LKFNNDARDPASTLRRFEAFCEEAASLHVREILLVSGSG-SRSFDSLACLKALTLPAERRPA------IGVAFNPFFPDRAARMRERARLRQKLNTGAVSAIWLQIGSDVLLLREALAFL-AELRGVHPALRLYGSVFLPSRKLLAQLKFRPWNGVFLSAEYLSSVEVASTITCRVLDAYATHGVEPLLESAVRSRAEWRAAREQL 266
BLAST of NO06G00140 vs. NCBI_GenBank
Match: XP_022839077.1 (unnamed product [Ostreococcus tauri] >CEF98095.1 unnamed product [Ostreococcus tauri] >OUS47823.1 paired amphipathic helix rep [Ostreococcus tauri]) HSP 1 Score: 148.3 bits (373), Expect = 3.800e-32 Identity = 88/209 (42.11%), Postives = 115/209 (55.02%), Query Frame = 0 Query: 1 MKYQHVGRDTEGAYAHIKSFCTDAASEGVREVLLVSGSGPKRKLDPAACLERLSKD---KQARGSFLSSLRFGVAFNPYLP---EMEEEESRFRAKIATGLVSSVWLQLGSDTAALRKGLDFVRIETEGRSPPIRVIGSVVIPSRKFLAMMKFRPWSGVRLSETYLSSVEEANKATKAILNVYKAYGVEPIVESAVKNEADLEQVKNLL 204 MK ++G + E +KSF AS G LLVSGSG R D L RLS D K+ RGSF F VAFNPY P ++ E R K+ + +V VW Q+G D AL G++ R + + GSV +P++ LA MKFRPW+GV LSE YLSSVE A + TKA L V+ + V P++ES + +AD Q + LL Sbjct: 73 MKNNYLG-NAEARVRRVKSFAKGVASRGGDRALLVSGSG-SRVCDTVEILRRLSSDREWKRERGSF----AFDVAFNPYFPDAADLARERERLALKLKSNMVRGVWFQIGCDLNALEAGIESARAIAGDAGAEVELFGSVFLPTKSLLARMKFRPWAGVYLSEEYLSSVESAERITKAQLEVFARHRVTPLIESPILTDADFAQCQRLL 275
BLAST of NO06G00140 vs. NCBI_GenBank
Match: OLQ09788.1 (ATP-dependent zinc metalloprotease FTSH 10, mitochondrial [Symbiodinium microadriaticum]) HSP 1 Score: 146.4 bits (368), Expect = 1.400e-31 Identity = 83/186 (44.62%), Postives = 118/186 (63.44%), Query Frame = 0 Query: 18 KSFCTDAASEGVREVLLVSGSGPKRKLDPAACLERLSKDKQARGSFLSSLRFGVAFNPYLPEMEEEESRFRAKIATGLVSSVWLQLGSDTAALRKGLDFVRIETEGRSPPIRVIGSVVIPSRKFLAMMKFRPWSGVRLS-ETYLSSVEEANKATKAILNVYKAYGVEPIVESAVKNEADLEQVKNL 203 + F +AA GV+ VLLVSG+G K K D +CL L+ D R S L GVAF+P+ + E E++R + K+++GLV S+WLQ+GSD ALR GL+F+R + IR+ GSV +PSR+ L+ + RPW+GV L+ YL S+E A K T+ IL +Y +GV P+VES V+N + L + L Sbjct: 3227 REFLLEAADVGVQAVLLVSGTGKKPKRDAVSCLHELAAD--LRESQLKLPHLGVAFSPF-EDPEVEQARLKDKLSSGLVDSIWLQIGSDLEALRAGLEFLR----DAAGDIRIYGSVFVPSRQLLSRFRERPWTGVDLTPNNYLESLENAEKVTQQILELYSEFGVLPLVESPVENASALRSMTAL 3405
BLAST of NO06G00140 vs. NCBI_GenBank
Match: XP_005834512.1 (hypothetical protein GUITHDRAFT_137315 [Guillardia theta CCMP2712] >EKX47532.1 hypothetical protein GUITHDRAFT_137315 [Guillardia theta CCMP2712]) HSP 1 Score: 141.0 bits (354), Expect = 6.000e-30 Identity = 81/200 (40.50%), Postives = 112/200 (56.00%), Query Frame = 0 Query: 18 KSFCTDAAS--EGVREVLLVSGSGPKRKLDPAACLERLSKDKQARGSFLSSLRFGVAFNPYLP---EMEEEESRFRAKIATGLVSSVWLQLGSDTAALRKGLDFVRI--ETEGRSPPIRVIGSVVIPSRKFLAMMKFRPWSGVRLSETYLSS-------VEEANKATKAILNVYKAYGVEPIVESAVKNEADLEQVKNLL 204 K+F D S GV LLVSGS LD CL+ L+ +Q GVAFNPY P E E E+ R + K+ATG VS VWLQ GS+ LR+GL F++ + P ++ GS+ +PS+KFLA MKFRPW GV LSE +L S V++A+ I+ +Y+ + VE ++E+A E D +V+ L+ Sbjct: 451 KTFINDVTSPPAGVGSFLLVSGSVVSSSLDSITCLKELAGSRQKHA------EIGVAFNPYFPDVKEREREQQRLKEKVATGCVSHVWLQFGSNMELLREGLRFLQAVRSASSTASPFKIFGSLFVPSKKFLAQMKFRPWKGVFLSEAFLDSVGGRVGLVDKADAVVTEIVTIYREFDVEVLIETACVKEEDFRRVEQLV 644
BLAST of NO06G00140 vs. NCBI_GenBank
Match: XP_005646554.1 (hypothetical protein COCSUDRAFT_53931 [Coccomyxa subellipsoidea C-169] >EIE22010.1 hypothetical protein COCSUDRAFT_53931 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 135.2 bits (339), Expect = 3.300e-28 Identity = 77/188 (40.96%), Postives = 110/188 (58.51%), Query Frame = 0 Query: 20 FCTDAASEGVREVLLVSGSGPKRKLDPAACLERLSKDKQARGSFLSSLRFGVAFNPYLP---EMEEEESRFRAKIATGLVSSVWLQLGSDTAALRKGLDFVRIETEGR-SPPIRVIGSVVIPSRKFLAMMKFRPWSGVRLSETYLSSVEEANKATKAILNVYKAYGVEPIVESAVKNEADLEQVKNLL 204 FC + + LL+SG G KRKLD L+RL A + VAFNPY P E EE R + K+ +GLV ++LQ+G+D L++GLDF++ R P+ + GS+ +PS++ LA M+FRPW+GV LS+ YLS+V++A T ILN Y +GV P+VES + +L Q +LL Sbjct: 87 FCACLSEDKQSSALLISG-GKKRKLDTVEALQRLG----ASACNFAMPPIYVAFNPYFPSKAEAAEERKRMQRKLDSGLVRGIYLQMGTDLKLLKEGLDFLKEAGSTRQDSPMNLYGSIFLPSKRLLAQMRFRPWNGVFLSDEYLSNVDKARSITSDILNSYSQHGVTPLVESNICTSQELRQCLDLL 269
BLAST of NO06G00140 vs. NCBI_GenBank
Match: OLP85092.1 (Retinol dehydrogenase 14 [Symbiodinium microadriaticum]) HSP 1 Score: 134.0 bits (336), Expect = 7.400e-28 Identity = 82/197 (41.62%), Postives = 113/197 (57.36%), Query Frame = 0 Query: 11 EGAYAHIKSFCTDAASEGVREVLLVSG-SGPKRKLDPAACLERLSKDKQARGSFLSSLRFGVAFNPYLP---EMEEEESRFRAKIATGLVSSVWLQLGSDTAALRKGLDFVRIETEGRSPPIRVIGSVVIPSRKFLAMMKFRPWSGVRLSETYLSSVEEANKATKAILNVYKAYGVEPIVESAVKNEADLEQVKNLL 204 E A +++C DAA+ GV VLLV+G GP++ D L++ G + +R GVAFN LP E E E R K+ TGLV+ VWL G D LR G+ FV+ +G + + GS ++PS L M+ RPW+GV+ SE +LSSVE AT L V++ GVEPI+ES VK+EAD+ ++ LL Sbjct: 1195 ENAVEAFRTWCHDAAAVGVSRVLLVTGPRGPRQ--DTVKVLKQF-------GRPVEGIRLGVAFNACLPTDAERELERQRLIQKLRTGLVNDVWLNTGVDEDLLRNGVAFVKSTCDGLNVKPGIFGSAMLPSEGQLQQMRERPWNGVQFSEEFLSSVEGMGTATSRALAVFREMGVEPILESKVKSEADISKLSALL 1382
BLAST of NO06G00140 vs. NCBI_GenBank
Match: WP_038652084.1 (hypothetical protein [Prochlorococcus sp. MIT 0801] >AIQ96895.1 putative Paired amphipathic helix repeat [Prochlorococcus sp. MIT 0801]) HSP 1 Score: 131.7 bits (330), Expect = 3.700e-27 Identity = 75/204 (36.76%), Postives = 112/204 (54.90%), Query Frame = 0 Query: 8 RDTEGAYAHIKSFCTDAASEGVREVLLVSGSGPKRKLDPAACLERLSKDKQARGSFLSSLRFGVAFNPYLPE--MEEEESRFRAKIATGLVSSVWLQLGSDTAALRKGLDF------VRIETEGRSPPIRVIGSVVIPSRKFLAMMKFRPWSGVRLSETYLSSVEEANKATKAILNVYKAYGVEPIVESAVKNEADLEQVKNLL 204 R+ Y F A G ++VLLVSGS + LD + L+ L K+ F + GVAFNPYLP +EE SR K+ +GLVSS+W+Q G+D L+ ++ V + I + GS++IPSR+FLA K+RPW GV S +L S E A+K +LN+YK + P++E+ + + L+++KN+L Sbjct: 79 RNRINTYDSFIYFLQAAKYSGCKQVLLVSGSQKRSTLDSVSALDML---KENSLFFNQDISIGVAFNPYLPSYLFDEEISRLEKKLQSGLVSSIWIQFGTDYKLLKSRIEILSNILSVPTNNHSKVSKISLFGSILIPSRQFLARFKYRPWKGVYCSTEFLESEESAHKIITNLLNIYKLNQICPLIETNISTDKHLDKLKNVL 279
BLAST of NO06G00140 vs. NCBI_GenBank
Match: XP_001417836.1 (predicted protein [Ostreococcus lucimarinus CCE9901] >ABO96129.1 predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 131.0 bits (328), Expect = 6.300e-27 Identity = 82/207 (39.61%), Postives = 113/207 (54.59%), Query Frame = 0 Query: 1 MKYQHVGRDTEGAYAHIKSFCTDAASEGVREVLLVSGSGPKRKLDPAACLERLSKDKQARGSFLSSLRFGVAFNPYLPEMEE----EESRFRAKIATGLVSSVWLQLGSDTAALRKGLDFVRIETEGRSPPIRVIGSVVIPSRKFLAMMKFRPWSGVRLSETYLSSVEEANKATKAILNVYKAYGVEPIVESAVKNEADLEQVKNLL 204 MK Q+ RD + +K+F + + LLVSGSG RK D L RL+ D++ + S+ RF VA+NP+ E + E R K+ GLV VW Q+GSD L +GL+ VR +P + GSV +PS++ LA MKFRPW+GV LS+ YLSSVE A + T A + +G P +ES V + D Q + LL Sbjct: 70 MKNQY-RRDANQSVEAVKAFADAMTARNIDRCLLVSGSG-SRKCDSVEVLRRLAMDREWKRR-ASTFRFDVAYNPHFDEGSDAAAREFERLEKKMRGGLVRGVWFQIGSDVEKLERGLERVR----DLAPDAEIYGSVFLPSKQLLARMKFRPWAGVFLSDEYLSSVERAEEITIAQMACLVRHGATPFIESPVTKDEDWAQCERLL 269
BLAST of NO06G00140 vs. NCBI_GenBank
Match: WP_011376548.1 (hypothetical protein [Prochlorococcus marinus] >ABB50057.1 paired amphipathic helix repeat-like protein [Prochlorococcus marinus str. MIT 9312] >KGF98935.1 putative Paired amphipathic helix repeat [Prochlorococcus marinus str. MIT 9311]) HSP 1 Score: 126.3 bits (316), Expect = 1.500e-25 Identity = 65/202 (32.18%), Postives = 112/202 (55.45%), Query Frame = 0 Query: 3 YQHVGRDTEGAYAHIKSFCTDAASEGVREVLLVSGSGPKRKLDPAACLERLSKDKQARGSFLSSLRFGVAFNPYLP---EMEEEESRFRAKIATGLVSSVWLQLGSDTAALRKGLDFVRIETEGRSPPIRVIGSVVIPSRKFLAMMKFRPWSGVRLSETYLSSVEEANKATKAILNVYKAYGVEPIVESAVKNEADLEQVKN 202 Y ++ E +Y F ++ S E+LL+SGS K+ D L ++ K+K + ++ G+A NPYL + E RF KI+TGL++SVW Q G+D L+ + F I+ + + + + GS++IPS++F+A KFRPW GV +SE YL S+++ N T+ ++ YK + P++E+ + L+ + + Sbjct: 68 YHQYSKNEEKSYYDFLDFLKNSYSNRNYEILLLSGSNKKKNFDSVNVLSKIKKEKVVK------IKLGIAHNPYLKKYYKSPSERDRFERKISTGLINSVWFQYGTDIKVLQNEVAF--IKNKAKYEKLNLFGSLLIPSKQFIARFKFRPWKGVHISEKYLYSLDDFNDFTRELICFYKYNNITPLIETDFSSSEKLDSLNS 261
BLAST of NO06G00140 vs. NCBI_GenBank
Match: WP_032525872.1 (hypothetical protein [Prochlorococcus marinus] >KGF98717.1 putative Paired amphipathic helix repeat [Prochlorococcus marinus str. MIT 9302]) HSP 1 Score: 122.9 bits (307), Expect = 1.700e-24 Identity = 68/195 (34.87%), Postives = 108/195 (55.38%), Query Frame = 0 Query: 8 RDTEGAYAHIKSFCTDAASEGVREVLLVSGSGPKRKLDPAACLERLSKDKQARGSFLSSLRFGVAFNPYLP---EMEEEESRFRAKIATGLVSSVWLQLGSDTAALRKGLDFVRIETEGRSPPIRVIGSVVIPSRKFLAMMKFRPWSGVRLSETYLSSVEEANKATKAILNVYKAYGVEPIVESAVKNEADLEQV 200 ++ E +Y F + S EVLLVSGS K+ D L + KDK + ++ G+A NPYL ++ E RF KI++GL++SVWLQ G+D L+ + + I+ + + GS++IPS++F+A KFRPW GV +SE YLSS+E+ T+ ++ YK + P++E+ + L+ V Sbjct: 73 KNKEKSYQDFLRFLKKSYSNKNYEVLLVSGSNKKKNFDAINVLNNIKKDK------ILKVKLGIAHNPYLKKYYKVSSERERFERKISSGLINSVWLQYGTDIKVLQNEVAY--IKKVANYEKLNLFGSLLIPSKQFIARFKFRPWKGVHISEMYLSSLEDFYDFTRDLVCFYKNNNITPVIETDFSSTEKLDSV 259 The following BLAST results are available for this feature:
BLAST of NO06G00140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G00140 ID=NO06G00140|Name=NO06G00140|organism=Nannochloropsis oceanica|type=gene|length=2596bpback to top protein sequence of NO06G00140.1 >NO06G00140.1-protein ID=NO06G00140.1-protein|Name=NO06G00140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=295bpback to top protein sequence of NO06G00140.2 >NO06G00140.2-protein ID=NO06G00140.2-protein|Name=NO06G00140.2|organism=Nannochloropsis oceanica|type=polypeptide|length=371bpback to top Synonyms
Publications
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