NO06G00130, NO06G00130 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G00130 vs. NCBI_GenBank
Match: EWM29561.1 (glutaredoxin [Nannochloropsis gaditana]) HSP 1 Score: 115.2 bits (287), Expect = 2.000e-22 Identity = 67/112 (59.82%), Postives = 78/112 (69.64%), Query Frame = 0 Query: 58 GTLAMAAPEAIISDAIK-----KPVMVFSKSTCPFCKKAKATLIAEGAKFEVIELDQRDDGPAIQAALAATTGRRTVPNVFVGGKSIGGGDDTKALSDSGKLKAMLQSAGAL 165 GT A EA+ D +K V+VFSK+ CPF AK TL +EGA F V+ELDQR DG IQAALA TGRRTVPNVF+ GKSIGGGDDT AL+ +GK+K ML + GAL Sbjct: 97 GTAVAATAEAM--DFVKTTLRAHKVVVFSKTYCPFASMAKRTLQSEGAVFHVVELDQRSDGGDIQAALAEMTGRRTVPNVFLEGKSIGGGDDTVALARAGKMKEMLSALGAL 206
BLAST of NO06G00130 vs. NCBI_GenBank
Match: AEW90961.1 (glutaredoxin 4H1 [Secale cereale x Triticum turgidum subsp. durum]) HSP 1 Score: 110.5 bits (275), Expect = 4.900e-21 Identity = 64/121 (52.89%), Postives = 79/121 (65.29%), Query Frame = 0 Query: 44 TAPSAIVSTYTRRMGTLAMAAPEAIISDAIKKPVMVFSKSTCPFCKKAKATLIAEGAKFEVIELDQRDDGPAIQAALAATTGRRTVPNVFVGGKSIGGGDDTKALSDSGKLKAMLQSAGAL 165 TA S+ S T +A+A + I++ A PV+VFSKS CPFC + K L GA F+ IELD DGP IQ+ALA TG+RTVPNVF+ GK IGG DDT AL+ GKL A+L AGA+ Sbjct: 3 TAFSSSSSASTPESRAMALAKAKEIVASA---PVVVFSKSYCPFCVQVKKLLTRLGASFKAIELDTESDGPEIQSALAEWTGQRTVPNVFINGKHIGGCDDTIALNKGGKLVALLTEAGAI 120
BLAST of NO06G00130 vs. NCBI_GenBank
Match: AEW90962.1 (glutaredoxin 4H6 [Secale cereale x Triticum turgidum subsp. durum]) HSP 1 Score: 110.5 bits (275), Expect = 4.900e-21 Identity = 64/121 (52.89%), Postives = 79/121 (65.29%), Query Frame = 0 Query: 44 TAPSAIVSTYTRRMGTLAMAAPEAIISDAIKKPVMVFSKSTCPFCKKAKATLIAEGAKFEVIELDQRDDGPAIQAALAATTGRRTVPNVFVGGKSIGGGDDTKALSDSGKLKAMLQSAGAL 165 TA S+ S T +A+A + I++ A PV+VFSKS CPFC + K L GA F+ IELD DGP IQ+ALA TG+RTVPNVF+ GK IGG DDT AL+ GKL A+L AGA+ Sbjct: 3 TAFSSSSSASTPESRAMALAKAKEIVASA---PVVVFSKSYCPFCVQVKKLLTQLGASFKAIELDTESDGPEIQSALAEWTGQRTVPNVFINGKHIGGCDDTIALNKGGKLVALLTEAGAI 120
BLAST of NO06G00130 vs. NCBI_GenBank
Match: XP_005855450.1 (glutaredoxin type i [Nannochloropsis gaditana CCMP526] >EKU20909.1 glutaredoxin type i [Nannochloropsis gaditana CCMP526] >EWM24375.1 glutaredoxin type i [Nannochloropsis gaditana]) HSP 1 Score: 110.5 bits (275), Expect = 4.900e-21 Identity = 59/97 (60.82%), Postives = 68/97 (70.10%), Query Frame = 0 Query: 66 EAIISDAI-KKPVMVFSKSTCPFCKKAKATLIAEGAKFEVIELDQRDDGPAIQAALAATTGRRTVPNVFVGGKSIGGGDDTKALSDSGKLKAMLQSA 162 EA + D I V SKS CPFC +AK+TL + GA E+IELDQR DGPA+Q LA TGRRTVPNVF+GGKSIGG DDT L G+LK +L SA Sbjct: 37 EAFLVDGITSNACFVVSKSYCPFCMRAKSTLASVGADCEIIELDQRADGPALQRVLADMTGRRTVPNVFIGGKSIGGADDTLLLHSKGELKRLLVSA 133
BLAST of NO06G00130 vs. NCBI_GenBank
Match: AEP25125.1 (glutaredoxin [Secale cereale x Triticum turgidum subsp. durum]) HSP 1 Score: 110.2 bits (274), Expect = 6.400e-21 Identity = 63/121 (52.07%), Postives = 79/121 (65.29%), Query Frame = 0 Query: 44 TAPSAIVSTYTRRMGTLAMAAPEAIISDAIKKPVMVFSKSTCPFCKKAKATLIAEGAKFEVIELDQRDDGPAIQAALAATTGRRTVPNVFVGGKSIGGGDDTKALSDSGKLKAMLQSAGAL 165 TA S+ S T +A+A + I++ A PV+VFSKS CPFC + K L GA F+ +ELD DGP IQ+ALA TG+RTVPNVF+ GK IGG DDT AL+ GKL A+L AGA+ Sbjct: 3 TAFSSSSSASTPESRAMALAKAKEIVASA---PVVVFSKSYCPFCVQVKKLLTQLGASFKAVELDTESDGPEIQSALAEWTGQRTVPNVFINGKHIGGCDDTIALNKGGKLVALLTEAGAI 120
BLAST of NO06G00130 vs. NCBI_GenBank
Match: XP_003580104.1 (glutaredoxin-C6 [Brachypodium distachyon] >KQJ83488.1 hypothetical protein BRADI_5g15220v3 [Brachypodium distachyon]) HSP 1 Score: 109.8 bits (273), Expect = 8.300e-21 Identity = 60/114 (52.63%), Postives = 77/114 (67.54%), Query Frame = 0 Query: 51 STYTRRMGTLAMAAPEAIISDAIKKPVMVFSKSTCPFCKKAKATLIAEGAKFEVIELDQRDDGPAIQAALAATTGRRTVPNVFVGGKSIGGGDDTKALSDSGKLKAMLQSAGAL 165 S+ T T+A+A + I++ A PV+VFSKS CPFC K K GA F+ IELD+ DG +Q+ALA TG+RTVPNVF+ GK IGG DDT AL++ GKL A+L AGA+ Sbjct: 7 SSSTPESRTMALAKAKEIVASA---PVVVFSKSYCPFCVKVKQLFTQLGASFKAIELDKESDGAEMQSALAEWTGQRTVPNVFINGKHIGGCDDTVALNNGGKLVALLTEAGAI 117
BLAST of NO06G00130 vs. NCBI_GenBank
Match: XP_020160474.1 (glutaredoxin-C6-like [Aegilops tauschii subsp. tauschii]) HSP 1 Score: 108.6 bits (270), Expect = 1.900e-20 Identity = 60/114 (52.63%), Postives = 75/114 (65.79%), Query Frame = 0 Query: 51 STYTRRMGTLAMAAPEAIISDAIKKPVMVFSKSTCPFCKKAKATLIAEGAKFEVIELDQRDDGPAIQAALAATTGRRTVPNVFVGGKSIGGGDDTKALSDSGKLKAMLQSAGAL 165 S+ T +A+A + I++ A PV+VFSKS CPFC + K GA F+ IELD DGP IQ+ALA TG+RTVPNVF+ GK IGG DDT AL+ GKL A+L AGA+ Sbjct: 8 SSSTPESRAMALAKAKEIVASA---PVVVFSKSYCPFCVQVKKLFTQLGASFKAIELDTESDGPEIQSALAEWTGQRTVPNVFINGKHIGGCDDTVALNKGGKLIALLTEAGAI 118
BLAST of NO06G00130 vs. NCBI_GenBank
Match: BAK01747.1 (predicted protein [Hordeum vulgare subsp. vulgare]) HSP 1 Score: 107.8 bits (268), Expect = 3.200e-20 Identity = 59/114 (51.75%), Postives = 75/114 (65.79%), Query Frame = 0 Query: 51 STYTRRMGTLAMAAPEAIISDAIKKPVMVFSKSTCPFCKKAKATLIAEGAKFEVIELDQRDDGPAIQAALAATTGRRTVPNVFVGGKSIGGGDDTKALSDSGKLKAMLQSAGAL 165 S+ T +A+A + I++ A PV+VFSKS CPFC + K GA F+ IELD DGP +Q+ALA TG+RTVPNVF+ GK IGG DDT AL+ GKL A+L AGA+ Sbjct: 9 SSSTPESRAMALAKAKEIVASA---PVVVFSKSYCPFCVQVKKLFTQLGASFKAIELDTESDGPEMQSALAEWTGQRTVPNVFINGKHIGGCDDTLALNKGGKLVALLTEAGAI 119
BLAST of NO06G00130 vs. NCBI_GenBank
Match: ACF40843.1 (glutaredoxin [Triticum aestivum]) HSP 1 Score: 107.8 bits (268), Expect = 3.200e-20 Identity = 58/105 (55.24%), Postives = 72/105 (68.57%), Query Frame = 0 Query: 60 LAMAAPEAIISDAIKKPVMVFSKSTCPFCKKAKATLIAEGAKFEVIELDQRDDGPAIQAALAATTGRRTVPNVFVGGKSIGGGDDTKALSDSGKLKAMLQSAGAL 165 +A+A + I++ A PV+VFSKS CPFC + K GA F+ IELD DGP IQ+ALA TG+RTVPNVF+ GK IGG DDT AL+ GKL A+L AGA+ Sbjct: 1 MALAKAKEIVASA---PVVVFSKSYCPFCVQVKKLFTQLGASFKAIELDTESDGPEIQSALAEWTGQRTVPNVFINGKHIGGCDDTVALNKGGKLIALLTEAGAI 102
BLAST of NO06G00130 vs. NCBI_GenBank
Match: XP_005835609.1 (hypothetical protein GUITHDRAFT_105774 [Guillardia theta CCMP2712] >EKX48629.1 hypothetical protein GUITHDRAFT_105774 [Guillardia theta CCMP2712]) HSP 1 Score: 107.1 bits (266), Expect = 5.400e-20 Identity = 60/113 (53.10%), Postives = 78/113 (69.03%), Query Frame = 0 Query: 54 TRRMGTLA-MAAPEAIISDAIK-KPVMVFSKSTCPFCKKAKATLIAEGAKFEVIELDQRDDGPAIQAALAATTGRRTVPNVFVGGKSIGGGDDTKALSDSGKLKAMLQSAGAL 165 +++ G LA A+ E + IK VMVFSKS CPFC KAK+TL G K+E +ELD+R DG IQ + + TG R+VP VFVGGK +GGGDD A + SG+L+AML+ AGA+ Sbjct: 39 SKKSGLLACQASAEDLAQKMIKSNKVMVFSKSYCPFCNKAKSTLDGLGVKYEAMELDKRADGSDIQDYMLSLTGARSVPRVFVGGKFVGGGDDVVAKAKSGELQAMLKQAGAM 151 The following BLAST results are available for this feature:
BLAST of NO06G00130 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G00130 ID=NO06G00130|Name=NO06G00130|organism=Nannochloropsis oceanica|type=gene|length=1706bpback to top protein sequence of NO06G00130.1 >NO06G00130.1-protein ID=NO06G00130.1-protein|Name=NO06G00130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=165bpback to top Synonyms
Publications
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