NO06G00090, NO06G00090 (gene) Nannochloropsis oceanica

Overview
NameNO06G00090
Unique NameNO06G00090
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4923
Alignment locationchr6:44151..49073 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:44151..49073 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO06G00090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G00090.1NO06G00090.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G00090.1NO06G00090.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G00090 ID=NO06G00090|Name=NO06G00090|organism=Nannochloropsis oceanica|type=gene|length=4923bp
TTCTTCTTTCGCTGTGGTTGCTTTGACGAGACATGTACCGGGGCACCACG
ACCAGAGCCGCTACTGCACGCACGTTTGACTGTCTTTCTCGTCCCTATCG
ACTACCATGAGTTGTGCTGTATGCTACGCCGCGGCTTATTTTTCGGGGGG
AGAATGATTATATTCATCACAAGGCATATGTCACTAACCGCTAGTCTCTT
CCCTCTATTTTCTCGTTCTAGTGACAGGCAAGCTATTGTATGGACGCCGC
CTCACTTCTACCAGTTGCATCCTTTCTCTCTGAACCCCGATCTCATAAGC
TCGAAGGAGGAACGACTGCTGCAGGACCAGCACAAGGACCTAGAGAGAGA
GTCGCCACGGCCACTGCCATCTCCTTGCCATCGCCTTTCTCTTTGTCCTC
CACCACCTCTTTTCCCGCGTGTCCCGCACCAAGTCGTCCTGTGTGTGTCT
CTATAGACACACACCCGTTTGCCATGGCCCTTGGCACAGACCTCTCCGGA
TCACCACCTCGACAGCCCAGGATCGAAGGGAAGGAGGGAGGTAGGGAGGT
AGGGGAGTGCGCGGAGAAGAAGCAGCAGCAGCGGCCAAAGCAGGAAGGGA
TTGAGGAGGAGGAAGCGGAGGAGGAAGAGGAGGGGAATGAAGATGTGGAG
GAGGAAGAGCAGCAACGACAGGGGGTAGCACCGAGTCCTGCGATGAAAGC
AGTGGGAGTGGCAGCGGCAGCAGCAACAGCAGCAGTAGTAGCCTTAGGAG
CAGGGGGAGGACGAGGAGGAGAGGAGGAGGAGGATACAGCAGCAGCAACA
ACAACAGCAGTAGAAGGAGGAGGAAAGGAAGAAGAAGAAGAAGAAGGAGG
AGGAAAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG
AAGAAGAAGAAGAAGAAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAA
GGAGGAGGAGAACAAGAAGAAGAAGAAGAAGAAGAAGAAAAAGAAGAAGG
AGAAGGAGAAGGAGAAGGAGGAGGAGGAGGAGGAGGAGAAGAAGCGCCCA
GGCTGGCGCGAGGAACgtaagtaccgaattgtggatgcttgcatgataga
cattcgactcagatgccctccctccctccctccctccctccctccctccc
gccttcttcgttgttgctccagCAAGAAGAAAGAGGTGGCGGACATGCGT
CGGCGGCACAAGCAGAAGATCCAGGATATGAGTGCCGAATACGACAGGGG
CATCGAGAAGgttggtagggagggagggagggagggagggctgaatgaaa
aagtacaaccgtatacatgccgtttgtgacggccttcacataatttgttt
tgtttcctccctctctcttcacccgattgattcttattctccctccctcc
ctccctccctcccacagCTCCGCCGGGAGCACCAAACCGAGATGGCCCGC
GTCCGAGAGGCGCGAGATgtgagggaatggggggaaggcgggcgggaggg
agggagggagggagggagggagggagggagggagatttcagtgtgttgag
acgcaagaccaaatgccgatcaacgaggacaggagggagggagggaggga
gggagggagggagggagggaagactcatgcacactgagttcaatttacca
tatgtgttaggactcaaccacctcccttccttccctccctccctccctcc
ccctccacgccctgcagCGCAAGTTTCAAGAATACGACGCCCGCCTCGAG
GAGACGTCGAAGGAGCTCACTCGCCTCAAAGGGCTCCTGATGGTGCACGA
AGCGAATAGCAGCAGCAGCAGCAGCAGCAGTCGTAGTGGTAACAGCAACA
ACAGCAGTCGTAGTGGTAACAGCAGTGATAACAACCGCAGTATCACCCCC
ACCACCAGCAGTGGCACCAACAGAAGCGGCAGCGGCAGCAGCGGCAACCG
CGAAGCATCCCTCCTTCCCTCCCTCCTTCCCTCCTTCCCTCCCTCCTCCT
CCTCAATAGCAGGGATGAATGCCGAGATGAGGGAGGGAGGGAGGGAGGGA
GGGAAAGAGGGAGAGGAGGAGGAGGCGCTCAACTTGCCAGCGCAAGTGAT
GGAGCTAAAGCAGCAGgttagagggagggaggaagggaggaagggaggga
ggaagggagggaggaagggagggagggagggagggagggaggaagggagg
aaggaagggaggaaggaagggaggaaggaagggagggggggagggaggga
gggagggagagagatatggaagtagggagggagagagggcacaaacaagg
ctcctctcttatgtacctccctccccccctccctccctccctccctcccc
cccttcctccctcctcaccatgagctggcctgcatccaggatgacttcgt
gttcgccattcacctcccatttcctccctccctccctccctccctccctc
cctccctccctccctgtagCTGGCCACCGTGAAAGACGAATTGGAGTTTT
CGAACGAGCTCTTCCACGACCTGTCCGTTTATTGTAACGGCCTCAAGAGT
CAGCTCAACGGCGTCAAGGACGTGCTGgtagggagggagggaaggaggga
agaagggaaggagggaaggagggaaggagggagggagggagggagggagg
aagagagggaggcgggcatgatggccaggaagaggtgaagaagccgacag
tcctgacagcccgtccctctctccctcaccctcctccctccctccctccc
tccctccctccctccctccctcagATCAACGTCGGCTCCATTTGCCTGCC
GGACGTGTTGCCCACCTACACCTTCTGCGAGGCCTCCCCCGAGGAGgtga
gggagggcgggcgggagggagggcgggagggcgggagggagggagggagg
gaggtgacagcgtccggtttgcctgaggcatgataaagagcgagatactg
acatccctccctccctccctccctccctccctcagGTGGAACGCGCTCTC
CTAACTGGTCGTGAGGAGCGTGACAAGGAGCTTGCTTCGGCCTTGGATGA
AGTAGAGGAGATGGAGGTGATGGATGAGgtaaggagggagggaaggaagg
agggagggaaggaaggagggaggaagggaaggagggagggagggaaggag
ggagggagggagggagggaaaggtatgagtacttcacgtatgcgcacctg
acgtcgattgggttaagtcttatgacccnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnncccagTCCACCTGGCGCTCCAT
CTCTCTGGCCGTCTCCCGGGAGTTTTACCGATGGATGGTCGCCGTTCGGG
GCCTAAAGGAgtaagctttcctcccctcccttcctcccttcccctcctcc
atcttccttcctccctccctccctccctcccttcctccctccccctcttt
ctctgggtctcctccttagaatgcttgggtctgtcccatcaaatgctaac
caaacccgcccgccctcccgccctccctcccgccctcccttcctagCCCT
CCTCTTCCCCCCTCCTCCTCCTCCTCCTCCTCTTCCGCGTCCTCCCCTGC
CCGCGCCACCTCCCCCTCCCTCTTGGAAGAGGAGAGACTCACCCGTCTCC
CCTCCCAAGAGAGCATGACCTTTATCGACGAGATGATTAAAACGCTCGTG
ATGAAGAACAACACCCTGATGCTAAAAAGCGAGGTCCGCCGgtacgtcac
ctccctccctccctccctccgagaggcgtgtcagcgatcccgaccatatc
ccttgtctgcgcacctccctccctccctccctccctccctccctccctcc
ctccctccctccctccttcccttcccccaaccttcctgtccaacatccct
cccttcttaactgcggccagggctgcctttttcatagccaggtgttgcac
tagatttcatttcgctcctcccctccctccctccctcccgccctctttcc
cttcctccttccgtctttccccttccttcctccctcagTCTCATCAGGGG
CTATCCAGGCCATTTGGAGCGTCTCATCGCCGACGCCTCCGACGAGGAGA
AGCGAATATGGGGCCTTTTCAAgtaagaaagcagggagggagggagggag
ggagggggggtactggaggtgcgtgtgttgggatgaacaagtgctggtcc
agttgactctacttcctcaacatctccctccctccctccctccctccccc
tccctccctccctctctccttccctccatccccctagGGAGTTCATCCTC
GTGGCGGATGATCGCTGGGAAAGCAAGGAGGCGAGAGAAGCCGCAGCCAA
AGAGGTTTTGGCGGCGGAGATGGCAGCAGCAGAGGCAGCCACAGATGGGG
AGGGGGGAGGAAGGGGAGGGAGGGAGAAGAGGAGAAGAGGGTGTGTGGAT
TAATTCGATGAGGCGAATGAGGAGGAAGGAAGGGAGAATGATGGGGAGGG
AAGGAAGTGGTGGTGCCCGGACGACTGGAATTGACATGATATAATATTTA
TCGGGGATCACGCTGGGTGGAGAAAAGGGAGGAGGGAAAAGGAGGGAGAA
GGAGGGGAGGGCCGCGAAGCAGAAGGTGGTGGTTGAGGGAAGGAGGTGGC
TGGTTCAAGAGCGAATGGTGCTACGTTAACTTTGCCCTCGGATGGATACG
ATGAGCTCTTGCCGTAGGGGAATCTGCTGCTGGAGGAAGAGGGATGCTTT
AAAATTAATTCAACTTTTTGTTTAATGAGGAGGTAAGGAAAGAGAAAGAA
GAGAAAGAGACGACGTGAGGGGCCGAGCAAAAAGGCGACGAAAAGAAAAT
AAGAATAGTCCATAGCAAACCCC
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protein sequence of NO06G00090.1

>NO06G00090.1-protein ID=NO06G00090.1-protein|Name=NO06G00090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=720bp
MDAASLLPVASFLSEPRSHKLEGGTTAAGPAQGPRERVATATAISLPSPF
SLSSTTSFPACPAPSRPVCVSIDTHPFAMALGTDLSGSPPRQPRIEGKEG
GREVGECAEKKQQQRPKQEGIEEEEAEEEEEGNEDVEEEEQQRQGVAPSP
AMKAVGVAAAAATAAVVALGAGGGRGGEEEEDTAAATTTAVEGGGKEEEE
EEGGGKEEEEEEEEEEEEEEEEEEEEEGEGEGEGEGEGGGEQEEEEEEEE
KEEGEGEGEGGGGGGGEEAPRLARGTKKKEVADMRRRHKQKIQDMSAEYD
RGIEKLRREHQTEMARVREARDRKFQEYDARLEETSKELTRLKGLLMVHE
ANSSSSSSSSRSGNSNNSSRSGNSSDNNRSITPTTSSGTNRSGSGSSGNR
EASLLPSLLPSFPPSSSSIAGMNAEMREGGREGGKEGEEEEALNLPAQVM
ELKQQLATVKDELEFSNELFHDLSVYCNGLKSQLNGVKDVLINVGSICLP
DVLPTYTFCEASPEEVERALLTGREERDKELASALDEVEEMEVMDESTWR
SISLAVSREFYRWMVAVRGLKDPPLPPSSSSSSSSASSPARATSPSLLEE
ERLTRLPSQESMTFIDEMIKTLVMKNNTLMLKSEVRRLIRGYPGHLERLI
ADASDEEKRIWGLFKEFILVADDRWESKEAREAAAKEVLAAEMAAAEAAT
DGEGGGRGGREKRRRGCVD*
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Synonyms
Publications