NO06G00070, NO06G00070 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G00070 vs. NCBI_GenBank
Match: EWM20456.1 (selenoprotein-like protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 134.8 bits (338), Expect = 2.800e-28 Identity = 63/99 (63.64%), Postives = 83/99 (83.84%), Query Frame = 0
Query: 91 LEASAGKYVRAEISLDEFFLRMIPELQSFLQSKQAKAWKQSGMLAVHFRQGVRPNLQLFSREQTTPGEIVSIAQWTAESITEFIQENLHEEDDEKETLR 190
L S +YVRAEI+LDE+FLR++P L SFL + +A AW+++G+L+VH++ GVRPNLQLF+ QTTPGEIVSI+QWTAES+ EF+ +NLHEEDDE+E R
Sbjct: 1 LPPSLPQYVRAEINLDEYFLRLLPALASFLNTPEAIAWEETGILSVHYQHGVRPNLQLFAAGQTTPGEIVSISQWTAESLKEFLLDNLHEEDDEEEATR 99
BLAST of NO06G00070 vs. NCBI_GenBank
Match: CTP80890.1 (Bm7150 [Brugia malayi]) HSP 1 Score: 77.0 bits (188), Expect = 7.000e-11 Identity = 55/172 (31.98%), Postives = 85/172 (49.42%), Query Frame = 0
Query: 6 KGCCGASPRPSLFFLFLFVALATALRVVPSMASTQRALALETCLEKGFNRETLKCSSCEKLAGAVGKKGEALVQDCQACCEDDDDLEASAGKYVRAEISLDEFFLRMIPELQSFLQSKQAKAWKQSGMLAVHFRQGVRPNLQLFSREQTTPGEI---VSIAQWTAESITEFI 175
K C G + +L LF+ + + +V S L +TC E+GFN E+L+CSSC L + LV DC +CC D E KY RA I + E L P+ ++F++S K W + VH +G P ++L + GE+ ++I +W ++ITEF+
Sbjct: 22 KTCSGTHSSNFMNYLQLFLQIVVMIPLVYS------ELDHQTCQERGFNSESLQCSSCADLPQF---HLDELVDDCNSCCR-KDYAEMEQEKYPRAHIEICECNLGRFPQAEAFVKSNMVKKW--GTCVKVHHVRGTLPTIKLLDAQ----GEVQKTMNIEKWDTDTITEFL 177
BLAST of NO06G00070 vs. NCBI_GenBank
Match: EJW88107.1 (hypothetical protein WUBG_00984 [Wuchereria bancrofti]) HSP 1 Score: 76.3 bits (186), Expect = 1.200e-10 Identity = 46/132 (34.85%), Postives = 72/132 (54.55%), Query Frame = 0
Query: 46 ETCLEKGFNRETLKCSSCEKLAGAVGKKGEALVQDCQACCEDDDDLEASAGKYVRAEISLDEFFLRMIPELQSFLQSKQAKAWKQSGMLAVHFRQGVRPNLQLFSREQTTPGEI---VSIAQWTAESITEFI 175
+TC E+GFN E+L+CSSC L + LV DC +CC +D +E KY RA I + E L P+ ++F++S K W + VH +G P ++L + GE+ ++I +W ++ITEF+
Sbjct: 15 QTCQERGFNSESLQCSSCADLPQF---HLDELVDDCNSCCR-NDYVEMEQAKYPRAYIEICECNLGRFPQAEAFVKSNMVKKW--GTCVKVHHVRGTLPTIKLLDAQ----GEVQKTMNIEKWDTDTITEFL 136
BLAST of NO06G00070 vs. NCBI_GenBank
Match: XP_020303914.1 (selenoprotein [Loa loa] >EFO27372.1 selenoprotein [Loa loa]) HSP 1 Score: 75.1 bits (183), Expect = 2.700e-10 Identity = 57/170 (33.53%), Postives = 86/170 (50.59%), Query Frame = 0
Query: 8 CCGASPRPSLFFLFLFVALATALRVVPSMASTQRALALETCLEKGFNRETLKCSSCEKLAGAVGKKGEALVQDCQACCEDDDDLEASAGKYVRAEISLDEFFLRMIPELQSFLQSKQAKAWKQSGMLAVHFRQGVRPNLQLFSREQTTPGEI---VSIAQWTAESITEFI 175
C GA S++ L LF L L+ V S + Q C ++GFN E+L+CSSC +L LV DC ACC D +E KY RA+I + E L P+ ++F++S K W + VH +G P ++L + GE+ ++I +W ++ITEF+
Sbjct: 3 CPGAFSGRSVYQLQLF--LIVVLQFVYSELNRQ------VCQKRGFNSESLQCSSCAELPQF---HLSELVADCNACCR-KDYVETKQEKYPRAQIEICECNLGRFPQAEAFVKSNMVKKW--GTCVKVHHVRGTLPTIKLLDAQ----GEVQKTMNIEKWDTDTITEFL 154
BLAST of NO06G00070 vs. NCBI_GenBank
Match: XP_001892444.1 (15 kDa selenoprotein precursor [Brugia malayi]) HSP 1 Score: 74.7 bits (182), Expect = 3.500e-10 Identity = 46/132 (34.85%), Postives = 70/132 (53.03%), Query Frame = 0
Query: 46 ETCLEKGFNRETLKCSSCEKLAGAVGKKGEALVQDCQACCEDDDDLEASAGKYVRAEISLDEFFLRMIPELQSFLQSKQAKAWKQSGMLAVHFRQGVRPNLQLFSREQTTPGEI---VSIAQWTAESITEFI 175
+TC E+GFN E+L+CSSC L + LV DC +CC D E KY RA I + E L P+ ++F++S K W + VH +G P ++L + GE+ ++I +W ++ITEF+
Sbjct: 12 QTCQERGFNSESLQCSSCADLPQF---HLDELVDDCNSCCR-KDYAEMEQEKYPRAHIEICECNLGRFPQAEAFVKSNMVKKW--GTCVKVHHVRGTLPTIKLLDAQ----GEVQKTMNIEKWDTDTITEFL 133
BLAST of NO06G00070 vs. NCBI_GenBank
Match: OZC09051.1 (Sep15/SelM redox domain protein [Onchocerca flexuosa]) HSP 1 Score: 73.2 bits (178), Expect = 1.000e-9 Identity = 44/129 (34.11%), Postives = 67/129 (51.94%), Query Frame = 0
Query: 46 ETCLEKGFNRETLKCSSCEKLAGAVGKKGEALVQDCQACCEDDDDLEASAGKYVRAEISLDEFFLRMIPELQSFLQSKQAKAWKQSGMLAVHFRQGVRPNLQLFSREQTTPGEIVSIAQWTAESITEFI 175
+ C E+GFN E+L+CSSC L + LV DC +CC D E KY A I + E L P+ ++F++S K W + VH +G P ++L Q +I++I +W ++ITEF+
Sbjct: 35 QICQERGFNSESLQCSSCADLPQFY---LDRLVADCNSCCR-KDYAETEQKKYPMAHIEICECNLARFPQAEAFVKSSMVKKW--GACVKVHHVRGTLPTIKLLD-AQGEVQKIMNIEKWDTDTITEFL 156
BLAST of NO06G00070 vs. NCBI_GenBank
Match: CAR63555.1 (putative 15 kDa selenoprotein precursor [Angiostrongylus cantonensis]) HSP 1 Score: 72.8 bits (177), Expect = 1.300e-9 Identity = 52/163 (31.90%), Postives = 80/163 (49.08%), Query Frame = 0
Query: 14 RPSLFFLFLFVALATALRVVPSMASTQRALALETCLEKGFNRETLKCSSCEKLAGAVGKKGEALVQDCQACCEDDDDLEASAGKYVRAEISLDEFFLRMIPELQSFLQSKQAKAWKQSGMLAVHFRQGVRPNLQLFSREQTTPGEIVSIAQWTAESITEFIQE 177
R L F+FL V+ A + + LE C GF ETLKCSSCEKL E L DC +CC + +LE KY A + + E L P++++F++ A W G + V +GVRP + L T + ++I +W ++I++F+ +
Sbjct: 2 RVLLNFVFLIVSYAEI---------EEYKIPLEECSSHGFLPETLKCSSCEKLG---SYNLEMLTGDCMSCCAKEKELEHE--KYPMAHVEVCECNLGRFPQVEAFVREDMASQW--GGKVRVRHVRGVRPQIILKDANGVTK-QTLNIEKWDTDTISDFLNQ 147
BLAST of NO06G00070 vs. NCBI_GenBank
Match: EYC15326.1 (hypothetical protein Y032_0037g3458 [Ancylostoma ceylanicum]) HSP 1 Score: 69.3 bits (168), Expect = 1.500e-8 Identity = 50/152 (32.89%), Postives = 78/152 (51.32%), Query Frame = 0
Query: 27 ATALRVVPSMASTQRALALETCLEKGFNRETLKCSSCEKLAGAVGKKGEALVQDCQACC--EDDDDLEASAGKYVRAEISLDEFFLRMIPELQSFLQSKQAKAWKQSGMLAVHFRQGVRPNLQLFSREQTTPGEIVSIAQWTAESITEFIQE 177
A A + S + +L+ E C GF ETLKCS+C KL+ E L+ DC ACC E +D+ E KY A I + E L P++Q+F++ A W G + V +GVRP ++L T + ++I +W ++I +F+ +
Sbjct: 7 ALACFAMASAEVEEYSLSREECRSAGFVPETLKCSTCGKLSKF---NLEMLMSDCMACCTKEQEDEHE----KYPMAHIEVCECNLARFPQVQAFVRENMASHW--GGKVRVRQVRGVRPQIKLKDDAGITK-QTLNIEKWDTDTIKDFLNQ 148
BLAST of NO06G00070 vs. NCBI_GenBank
Match: EYC15327.1 (hypothetical protein Y032_0037g3458 [Ancylostoma ceylanicum]) HSP 1 Score: 69.3 bits (168), Expect = 1.500e-8 Identity = 47/137 (34.31%), Postives = 73/137 (53.28%), Query Frame = 0
Query: 42 ALALETCLEKGFNRETLKCSSCEKLAGAVGKKGEALVQDCQACC--EDDDDLEASAGKYVRAEISLDEFFLRMIPELQSFLQSKQAKAWKQSGMLAVHFRQGVRPNLQLFSREQTTPGEIVSIAQWTAESITEFIQE 177
+L+ E C GF ETLKCS+C KL+ E L+ DC ACC E +D+ E KY A I + E L P++Q+F++ A W G + V +GVRP ++L T + ++I +W ++I +F+ +
Sbjct: 10 SLSREECRSAGFVPETLKCSTCGKLSKF---NLEMLMSDCMACCTKEQEDEHE----KYPMAHIEVCECNLARFPQVQAFVRENMASHW--GGKVRVRQVRGVRPQIKLKDDAGITK-QTLNIEKWDTDTIKDFLNQ 136
BLAST of NO06G00070 vs. NCBI_GenBank
Match: KHN77304.1 (15 kDa selenoprotein [Toxocara canis]) HSP 1 Score: 68.6 bits (166), Expect = 2.500e-8 Identity = 44/131 (33.59%), Postives = 67/131 (51.15%), Query Frame = 0
Query: 44 ALETCLEKGFNRETLKCSSCEKLAGAVGKKGEALVQDCQACCEDDDDLEASAGKYVRAEISLDEFFLRMIPELQSFLQSKQAKAWKQSGMLAVHFRQGVRPNLQLFSREQTTPGEIVSIAQWTAESITEFI 175
+L C + GFN ETL+CSSC +L + LV DC ACC D+ E KY A I + E L P++Q+F++S W + V +G P ++L T + ++I +W ++ITEF+
Sbjct: 28 SLSQCRDAGFNSETLQCSSCNELPQF---HLDQLVDDCNACCTPDES-ENQHEKYPLAHIEICECNLARFPQVQAFVKSDMVNQW--GSHVKVRHVRGTLPTIKLKDVYGETQ-QTMNIEKWDTDTITEFL 151 The following BLAST results are available for this feature:
BLAST of NO06G00070 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G00070 ID=NO06G00070|Name=NO06G00070|organism=Nannochloropsis oceanica|type=gene|length=1460bpback to top protein sequence of NO06G00070.1 >NO06G00070.1-protein ID=NO06G00070.1-protein|Name=NO06G00070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=193bpback to top Synonyms
Publications
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