NO06G00020, NO06G00020 (gene) Nannochloropsis oceanica

Overview
NameNO06G00020
Unique NameNO06G00020
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3266
Alignment locationchr6:2800..6065 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:2800..6065 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO06G00020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G00020.2NO06G00020.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO06G00020.1NO06G00020.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G00020.2NO06G00020.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO06G00020.1NO06G00020.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G00020 ID=NO06G00020|Name=NO06G00020|organism=Nannochloropsis oceanica|type=gene|length=3266bp
AAGGAGTGGGACTGACAGCTATCCACGCGGGGCGCGCTTATACAAAAAGG
AAGCGGCTAGTTTAGAACGGGATGGCGTCATTGTCCAGCGGAAACGCCAA
ACGCCTGAAACCGGCGACTACCCCACCTTGCGGGGCTTATTTTGGTGCTC
ATATTAAGAGAGAAGTAGATGCCATTATGCTGGTGGCAAAGCACGTGATG
GTGATAAAAACCCCAAAAACATAATGAGAAAAAACTTACATAACTTTTTT
GGTGCTCACAATATGTCAATAACTTTTATAAAGACGGCAGTGGGTTTTCT
AGTTGTCGACATGACGAATGAGGGCATCTATTTTATTGCGGCTAAGAGAA
GAAAGTGGGCGCGCGATTAGATCTGCTTACCTTATATATGGTGCCAGAGC
AGCAATGTAATGCTTCAGAAAAGGGAGTAGGCGCCTGGACTTGTTTCCAC
ATATTGAAGTGCTTGCCCTAGGTATCACACATCTCTTTTGCCGCCACTTA
AATGTCAAAACCTCCTGGTCATGACAACAGGCAAGGTGCCTCCATGTCTT
GAGAGCAGgtgcgtgaacaaacgggcgtcaaggcgcccatgtgtcccaac
tcggaccaggagatcaatatctgtgccctcaaactcacatcaaaatcgag
aacgatctaacacattgcaaaatcacccttcttccatttgtggtaccagA
AAAGGCATAGAAGTCGGCATGGCGATGCCCACCATCTTCCGCTCGGACAC
TCTCATTGCCGTCATATTGTCAATTTTAAGTCAATTTTATTGTTGAGAAA
GATTGGAGAGTGGGTAAGCAGAGAAAATAGATAAGAGCCACGTTATTTCT
GACCACATACAATCCTTTTACGATGATTGCACGAATAACGCGCTCTCTAG
CTGCTGCGGGAACTTTCGAGAACTTTAAACCTTGGACTGCAGAAGGCCTG
AACAATGCAAGATTCATTTGGGACCTCTGTCGGCATTATATTTGATCAAA
CAATCCAGGACACCCAAAATAGCGGCCGTGTGCGGCGCATGTCAAATGCC
TATACAACTTCTGAATTTTCCAACCAACCCTTCTCGCCCACGACAGCACA
AATGGCAGGTGAAGCGGGCAGTAGCCTCTGGAGCGACCTTGTGACGACCA
TACTAAGCCTTAAAAACCACCGGGCTACCGAGCCGATGCCACGATCGCCA
CCTTCTACACGCGCGTGAATTTCACGTCCGCCACGGGATCCGCCCAGCCG
GATCTTTCCTTGGGACTGTCCCTGTGTGCCAAGCAGTCAACCTGGCGCAT
GACCTTGATCCAGCGGAATAAAAATGGTGCGGTTATCGATATTATTTACT
GGGATGATACGGTGAACCAGCTTAATAACGATTCTATATTTAGCAGCACA
TGTATCGCCTCTGGCTTATCCTACACTGCAGTTCACTCCCTGGAGATGGA
TACGTACTTTCAAAGATGATTTTAATAATGACGTTGTCAATAATTTTCTG
GACGGCACCCTTACTCACACCGTTGGCACATGGGAAGCAAATTACTACTT
TTATGGAGACTTGGCCATTCAGCTGCGCCTTTAGATTGTTGACTCATTTC
TAGTACGATCCAGTGGGATAGCAAAGCCAGAATATTGAGATCAAGGCTTT
TTCTTCATTAAGATAGACGTATCCGCAAATATCCCCTCCCGCAGTACCCG
TCATACTGCCCACTCCAGTCGGGGAAAGAGTGACCTTGCAATGGACAAAT
TAGATTCGCCGAGGTTGTCAGCCCCGTAATCACGGTAAGTGAGCACAGAA
TGATGTGAGGAGGAAGATATACCCTACCGATGTACCCGCCTTCACTGTAA
TTTCTCTGCCCATTTTACCAGTCCACCCCCAATAGTTCGCGCTGCCGCTA
CTGCTGCCATCTCTATCTCGTCTTCACTCCCATTACTGCTCAATAACTTC
TTTCTCATCGTTCAAGGAACAGACTTTCCCCGCTGTGAACGTCACCGCTG
GCAAGGCGGATCCATTTTATATCCCGCCATGCAATTTTGTCTTCGGCGCC
CCCTTCGTCTACATTTACATTTCTACCGACGCCGTCTTTTCACCTGCAGT
CCTTGTCTGCTTGTTATACGCGACCAGCGCCTTCCCGGAGGACACAAAAC
CACGAATATTTCATTTTATGGGAGAACGGTGGGCAGATGCGACCTTTCGC
GTCAATACACGGCCCAAGTTGTCTGCGTTGAGGCCCAATCTTTCAGTCCT
TTTGCGTTAGGCTCCCTTATCACCACGTCCGATGATTGCGCAGTCAATCG
CACTCGGATTAAAGACAAGCAAAACGAAAAGGATTCCTGGACTTAATCGG
GCCCTACGAGTGTCACGGGTGGCGTGGGCGAAACAGGAGCAATTGGGGCC
ACAGGCGCCCCGGGCACGACAACTGGGGTCACTGGAGGCACGGGCGTGAT
GGGCTCGACTGGATCTACGGATGCCACAGGTGGCACGGTAACAATTGGAG
CAACTGGGGCTACTGGAGGCGTGGGAAGAGAGAGATGGAGGGCTGGAGGG
GATGGATGCGGGGAAGGTGGAGGCGGAGGAAGGCGGAGGAGGGGAGGAGT
GGAGGAGGGGAGGAAGGGAGGAGGCGGAGGCAGAGACGGGCGGGGGGAGA
GAGAGGTGGAAGGAGAGATTGGAGACGATGAAGAAACAGAGGCGCGAGGA
GAGAGACGGAGGGCTAGAGATGGAGGCGGAGAGAGGTGGTAAGAGACAGA
GGCGGGCTAGGAGAGGGAGAGAGAGGTGGAAGGAGGGGATGGAGGCCGAA
AGACGTGTGAGAGGCGGAGGGGAGGAGGAGGAGGGAAAGAGGGAAGGAGG
AGGAGGGAAAGAGGGGAGGAGGGGAGGAGGAGGGGGAGGAGGAGGGGAGA
AGGAGGAGGGGAGAAGAAGGAGGGGAGGAGGAGGAGGGGAAGGAGGAGGG
GGGCTCGGGCGCGATGGGCAGTTTTCGAGCATGACAGCTGCATCATGCGG
TGTATTGGCGTAGAGGGGGCCAGAATTGGTGCACAGCAAACGGCTTTTTA
AACATCATTGTTTCCCTACGGAACTTTTCTTCTTTACTCATAGGTGCTGG
TTGTGTGTATTGTGGCAACTCATCAAAAATGTCTGCGGCAGCATGGCAGA
AGAACATATCTTCGCTTTCTCCATTCGATGAGAAGCTTTATTTACGAACC
AATTATTGCAGAGTTAAGGAAATAGATTTGATCACCACTAGGCGAATAGC
ATTTCCTAAAATTGTA
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protein sequence of NO06G00020.2

>NO06G00020.2-protein ID=NO06G00020.2-protein|Name=NO06G00020.2|organism=Nannochloropsis oceanica|type=polypeptide|length=154bp
MDAGKVEAEEGGGGEEWRRGGREEAEAETGGGRERWKERLETMKKQRREE
RDGGLEMEAERGGKRQRRARRGRERWKEGMEAERRVRGGGEEEEGKREGG
GGKEGRRGGGGGGGGEKEEGRRRRGGGGGEGGGGLGRDGQFSSMTAASCG
VLA*
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protein sequence of NO06G00020.1

>NO06G00020.1-protein ID=NO06G00020.1-protein|Name=NO06G00020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=154bp
MDAGKVEAEEGGGGEEWRRGGREEAEAETGGGRERWKERLETMKKQRREE
RDGGLEMEAERGGKRQRRARRGRERWKEGMEAERRVRGGGEEEEGKREGG
GGKEGRRGGGGGGGGEKEEGRRRRGGGGGEGGGGLGRDGQFSSMTAASCG
VLA*
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Synonyms
Publications