NO06G00010, NO06G00010 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO06G00010 vs. NCBI_GenBank
Match: KKR54111.1 (hypothetical protein UT88_C0003G0007 [Candidatus Woesebacteria bacterium GW2011_GWD2_40_19] >KKR56820.1 hypothetical protein UT96_C0033G0003 [Candidatus Woesebacteria bacterium GW2011_GWC2_40_30] >KKR62776.1 hypothetical protein UU02_C0041G0007 [Candidatus Woesebacteria bacterium GW2011_GWA1_40_43]) HSP 1 Score: 79.7 bits (195), Expect = 4.100e-11 Identity = 49/127 (38.58%), Postives = 70/127 (55.12%), Query Frame = 0
Query: 452 TPTPEGVDVKLTFFNGTTVVGNITFADVTTIGITTVTPKDPGDPTYVVPSEFSLGEPPIYYSIVTTAIISGTTAVCLKFPSDSIP-SNKQPQLMHYEDDRWVDITTAVE--NNAVCGMTQSFSPFAV 576
TP +GV V L +GTT + F+ V T G+TTVT G PS F LG P YY+I TTA +G +C + + S + +LMH+ W +ITT+++ ++ +CG+T SFS FAV
Sbjct: 718 TPVGDGVSVAL---DGTT----LAFSQVNTSGVTTVTTSTSGTQP---PSGFRLGNPATYYNISTTATFTGNITICFSYDDTAFQGSESKLKLMHFNGQNWANITTSLDTTDDIICGVTTSFSDFAV 834
BLAST of NO06G00010 vs. NCBI_GenBank
Match: XP_005852440.1 (elicitin-like protein 6 precursor, partial [Nannochloropsis gaditana CCMP526] >EKU23392.1 elicitin-like protein 6 precursor, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 77.4 bits (189), Expect = 2.000e-10 Identity = 40/92 (43.48%), Postives = 54/92 (58.70%), Query Frame = 0
Query: 503 FSLGEPPIYYSIVTTAIISGTTAVCLKFPSDSIPSNKQPQLMHYEDDRWVDITTAV--ENNAVCGMTQSFSPFAVGYGFPTTLEDLLSVTKV 593
FSLG PP+Y I TTAI G +CL + + P +P+L H+ +D W D+TT V E+ +CG SFSPFA+G TT +S T+V
Sbjct: 1 FSLGNPPVYIFISTTAIFDGDIDLCLPYSKSTFPRGTEPRLFHFINDTWDDVTTEVDSESELLCGRVTSFSPFALGI-VATTDAPSISPTQV 91
BLAST of NO06G00010 vs. NCBI_GenBank
Match: WP_025739800.1 (hypothetical protein [Aquimarina pacifica]) HSP 1 Score: 76.6 bits (187), Expect = 3.500e-10 Identity = 44/128 (34.38%), Postives = 70/128 (54.69%), Query Frame = 0
Query: 450 EPTPTPEGVDVKLTFFNGTTVVGNITFADVTTIGITTVTPKDPGDPTYVVPSEFSLGEPPIYYSIVTTAIISGTTAVCLKFPSDSIPSNKQPQLMHYEDDRWVDITTAVE--NNAVCGMTQSFSPFAV 576
+P TP G V +T + T +TF V ++GIT V+ ++ G + FSL +P I+Y+I TT+ GT +C+++ D L+HYED WV++TT+++ N +CG S SPF +
Sbjct: 418 DPANTPLGTSVAVTEGDAT-----LTFDRVESVGITKVSEQETGP---ALSGNFSLCDPSIFYNITTTSDYEGTITICMQY--DESCEGPDLNLLHYEDGVWVNVTTSIDTTTNTICGNVTSLSPFVI 535
BLAST of NO06G00010 vs. NCBI_GenBank
Match: OGO12509.1 (hypothetical protein A2Y53_01885, partial [Chloroflexi bacterium RBG_16_47_49]) HSP 1 Score: 76.3 bits (186), Expect = 4.600e-10 Identity = 46/126 (36.51%), Postives = 62/126 (49.21%), Query Frame = 0
Query: 454 TPEGVDVKLTFFNGTTVVGNITFADVTTIGITTVTPKDPGDPTYVVPSEFSLGEPPIYYSIVTTAIISGTTAVCLKFPSDSIPSNKQPQLMHYEDDRWVDITTA----VENNAVCGMTQSFSPFAV 576
TP G ++ +T TT++ F +V T G TTVT G P PS F+LG P+YY I TTA+ +G VC + + + L H W +IT A NN +CG T S SPF +
Sbjct: 496 TPAGTNITVTPTPATTLI----FDNVNTTGNTTVTTSGTGAPP---PSGFNLGNQPLYYEITTTALFTGMIKVCFNYDESNYGNENLLSLFHLSGSVWENITIAGYPDTTNNIICGYTTSLSPFII 614
BLAST of NO06G00010 vs. NCBI_GenBank
Match: XP_005853387.1 (hypothetical protein NGA_0694300 [Nannochloropsis gaditana CCMP526] >EKU22974.1 hypothetical protein NGA_0694300 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 74.3 bits (181), Expect = 1.700e-9 Identity = 36/92 (39.13%), Postives = 53/92 (57.61%), Query Frame = 0
Query: 471 VGNITFADVTTIGITTVTPKDPGDPTYVVPSEFSLGEPPIYYSIVTTAIISGTTAVCLKFPSDSIPSNKQPQLMHYEDDRWVDITTAVENNA 563
VG + + + TV P D DP +V PS FSLG PP+Y I TTA+ G A+CL + + P +P+L H+ +D W D+TT V++ +
Sbjct: 18 VGTFSLQMSSARTVVTVIP-DISDPLFVPPSNFSLGNPPVYKFINTTAVFDGDAALCLSYSQSTFPMGTEPRLFHFINDAWEDVTTDVDSES 108
BLAST of NO06G00010 vs. NCBI_GenBank
Match: KKT81992.1 (hypothetical protein UW79_C0012G0002 [Candidatus Yanofskybacteria bacterium GW2011_GWA2_44_9]) HSP 1 Score: 73.2 bits (178), Expect = 3.900e-9 Identity = 46/117 (39.32%), Postives = 63/117 (53.85%), Query Frame = 0
Query: 467 GTTVVG-----NITF-ADVTTIGITTVTPKDPGDPTYVVPSEFSLGEPPIYYSIVTTAIISGTTAVCLKFPSDSIPSNKQPQLMHYEDDRWVDITTAVE--NNAVCGMTQSFSPFAV 576
G+ VVG ITF VT G TTVT G P P+ F LG PP+YYSI TTA + VC+ + S +L H + W ++TT+++ +N +CG+T SFS FA+
Sbjct: 318 GSPVVGPLSGVTITFVGGVTQEGQTTVTTSGTGQPP---PTGFKLGTPPVYYSISTTATFTAPVEVCINWIEGQFNSENNLKLWHSDGVVWTNVTTSLDTASNIICGLTNSFSDFAI 431
BLAST of NO06G00010 vs. NCBI_GenBank
Match: OGN15243.1 (hypothetical protein A3B99_02045 [Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_02_FULL_44_12b]) HSP 1 Score: 73.2 bits (178), Expect = 3.900e-9 Identity = 46/117 (39.32%), Postives = 63/117 (53.85%), Query Frame = 0
Query: 467 GTTVVG-----NITF-ADVTTIGITTVTPKDPGDPTYVVPSEFSLGEPPIYYSIVTTAIISGTTAVCLKFPSDSIPSNKQPQLMHYEDDRWVDITTAVE--NNAVCGMTQSFSPFAV 576
G+ VVG ITF VT G TTVT G P P+ F LG PP+YYSI TTA + VC+ + S +L H + W ++TT+++ +N +CG+T SFS FA+
Sbjct: 305 GSPVVGPLSGVTITFVGGVTQEGQTTVTTSGTGQPP---PTGFKLGTPPVYYSISTTATFTAPVEVCINWIEGQFNSENNLKLWHSDGVVWTNVTTSLDTASNIICGLTNSFSDFAI 418
BLAST of NO06G00010 vs. NCBI_GenBank
Match: OGN26905.1 (hypothetical protein A2925_01380 [Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_01_FULL_44_22]) HSP 1 Score: 73.2 bits (178), Expect = 3.900e-9 Identity = 46/117 (39.32%), Postives = 63/117 (53.85%), Query Frame = 0
Query: 467 GTTVVG-----NITF-ADVTTIGITTVTPKDPGDPTYVVPSEFSLGEPPIYYSIVTTAIISGTTAVCLKFPSDSIPSNKQPQLMHYEDDRWVDITTAVE--NNAVCGMTQSFSPFAV 576
G+ VVG ITF VT G TTVT G P P+ F LG PP+YYSI TTA + VC+ + S +L H + W ++TT+++ +N +CG+T SFS FA+
Sbjct: 706 GSPVVGPLSGVTITFVGGVTQEGQTTVTTSGTGQPP---PTGFKLGTPPVYYSISTTATFTAPVEVCINWIEGQFNSENNLKLWHSDGVVWTNVTTSLDTASNIICGLTNSFSDFAI 819
BLAST of NO06G00010 vs. NCBI_GenBank
Match: PKK82978.1 (hypothetical protein CVT49_10970 [candidate division Zixibacteria bacterium HGW-Zixibacteria-1]) HSP 1 Score: 72.0 bits (175), Expect = 8.600e-9 Identity = 56/165 (33.94%), Postives = 82/165 (49.70%), Query Frame = 0
Query: 420 PWITSYKDDPGKDTLPGFWPIDILLGAPAGEPTPTPEGVDVKLTFFNGTTVVGNITFADVTTIGITTVTPKDPG---DPTYVVPSEFSLGEPPIYYSIVTTAIISGTTAVCLKFPSDSIPSNKQP--QLMHYEDDRWVDITTAVE--NNAVCGMTQSFSPFAVGY 578
PWI Y D G D AGE TPEG +V + G +V ++TF DV T G T +T G ++P++ PIYY+I TTA SG VC+ + + +++ +L+HY+ W DIT + + +N +CG ++S SPF VGY
Sbjct: 1023 PWI--YNPDQGGDC------------TFAGE---TPEGTNVIVPL--GLSV--DLTFGDVLTAGTTEMTMSYTGPGVSGLQIIPADL-----PIYYNITTTAGYSGLIEVCVDYDDAGMSPSQENMLRLIHYDGTDWADITASADTASNTICGTSESLSPFVVGY 1161
BLAST of NO06G00010 vs. NCBI_GenBank
Match: WP_104060153.1 (carboxypeptidase regulatory-like domain-containing protein [Arthrobacter sp. 4R501]) HSP 1 Score: 72.0 bits (175), Expect = 8.600e-9 Identity = 56/135 (41.48%), Postives = 65/135 (48.15%), Query Frame = 0
Query: 458 VDVKLTFFNGTTVVGNI----------TFADVTTIGITTVTPKDPGDPTYVVPSEFSLGEPPIYYSIVTTAIISGT--TAVCLKFPSDSIPSNKQ--PQLMHYEDDRWVDIT-TAVENNA-VCGMTQSFSPFAVG 577
VD LT F VV + FADV T GITTVT GD Y SL PP+YY I TTA+ S VC+ F + ++ + L HY W DIT TA+ VCG T SFSPFAVG
Sbjct: 327 VDPSLTIFGTDVVVAPVDNDGRTDVALKFADVGTPGITTVTRLGSGD-AYPDGGFSSLTNPPLYYDIETTAVFSPALGVLVCITFDTSAMTEEQAAGQHLYHYVGGAWADITDTALSGTGKVCGRTTSFSPFAVG 460 The following BLAST results are available for this feature:
BLAST of NO06G00010 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 18
Pagesback to topRelationships
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO06G00010 ID=NO06G00010|Name=NO06G00010|organism=Nannochloropsis oceanica|type=gene|length=2626bpback to top protein sequence of NO06G00010.1 >NO06G00010.1-protein ID=NO06G00010.1-protein|Name=NO06G00010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=736bpback to top Synonyms
Publications
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