NO06G00010, NO06G00010 (gene) Nannochloropsis oceanica

Overview
NameNO06G00010
Unique NameNO06G00010
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2626
Alignment locationchr6:155..2780 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:155..2780 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence
IPR006626PbH1
Homology
BLAST of NO06G00010 vs. NCBI_GenBank
Match: KKR54111.1 (hypothetical protein UT88_C0003G0007 [Candidatus Woesebacteria bacterium GW2011_GWD2_40_19] >KKR56820.1 hypothetical protein UT96_C0033G0003 [Candidatus Woesebacteria bacterium GW2011_GWC2_40_30] >KKR62776.1 hypothetical protein UU02_C0041G0007 [Candidatus Woesebacteria bacterium GW2011_GWA1_40_43])

HSP 1 Score: 79.7 bits (195), Expect = 4.100e-11
Identity = 49/127 (38.58%), Postives = 70/127 (55.12%), Query Frame = 0
Query:  452 TPTPEGVDVKLTFFNGTTVVGNITFADVTTIGITTVTPKDPGDPTYVVPSEFSLGEPPIYYSIVTTAIISGTTAVCLKFPSDSIP-SNKQPQLMHYEDDRWVDITTAVE--NNAVCGMTQSFSPFAV 576
            TP  +GV V L   +GTT    + F+ V T G+TTVT    G      PS F LG P  YY+I TTA  +G   +C  +   +   S  + +LMH+    W +ITT+++  ++ +CG+T SFS FAV
Sbjct:  718 TPVGDGVSVAL---DGTT----LAFSQVNTSGVTTVTTSTSGTQP---PSGFRLGNPATYYNISTTATFTGNITICFSYDDTAFQGSESKLKLMHFNGQNWANITTSLDTTDDIICGVTTSFSDFAV 834          
BLAST of NO06G00010 vs. NCBI_GenBank
Match: XP_005852440.1 (elicitin-like protein 6 precursor, partial [Nannochloropsis gaditana CCMP526] >EKU23392.1 elicitin-like protein 6 precursor, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 77.4 bits (189), Expect = 2.000e-10
Identity = 40/92 (43.48%), Postives = 54/92 (58.70%), Query Frame = 0
Query:  503 FSLGEPPIYYSIVTTAIISGTTAVCLKFPSDSIPSNKQPQLMHYEDDRWVDITTAV--ENNAVCGMTQSFSPFAVGYGFPTTLEDLLSVTKV 593
            FSLG PP+Y  I TTAI  G   +CL +   + P   +P+L H+ +D W D+TT V  E+  +CG   SFSPFA+G    TT    +S T+V
Sbjct:    1 FSLGNPPVYIFISTTAIFDGDIDLCLPYSKSTFPRGTEPRLFHFINDTWDDVTTEVDSESELLCGRVTSFSPFALGI-VATTDAPSISPTQV 91          
BLAST of NO06G00010 vs. NCBI_GenBank
Match: WP_025739800.1 (hypothetical protein [Aquimarina pacifica])

HSP 1 Score: 76.6 bits (187), Expect = 3.500e-10
Identity = 44/128 (34.38%), Postives = 70/128 (54.69%), Query Frame = 0
Query:  450 EPTPTPEGVDVKLTFFNGTTVVGNITFADVTTIGITTVTPKDPGDPTYVVPSEFSLGEPPIYYSIVTTAIISGTTAVCLKFPSDSIPSNKQPQLMHYEDDRWVDITTAVE--NNAVCGMTQSFSPFAV 576
            +P  TP G  V +T  + T     +TF  V ++GIT V+ ++ G     +   FSL +P I+Y+I TT+   GT  +C+++  D         L+HYED  WV++TT+++   N +CG   S SPF +
Sbjct:  418 DPANTPLGTSVAVTEGDAT-----LTFDRVESVGITKVSEQETGP---ALSGNFSLCDPSIFYNITTTSDYEGTITICMQY--DESCEGPDLNLLHYEDGVWVNVTTSIDTTTNTICGNVTSLSPFVI 535          
BLAST of NO06G00010 vs. NCBI_GenBank
Match: OGO12509.1 (hypothetical protein A2Y53_01885, partial [Chloroflexi bacterium RBG_16_47_49])

HSP 1 Score: 76.3 bits (186), Expect = 4.600e-10
Identity = 46/126 (36.51%), Postives = 62/126 (49.21%), Query Frame = 0
Query:  454 TPEGVDVKLTFFNGTTVVGNITFADVTTIGITTVTPKDPGDPTYVVPSEFSLGEPPIYYSIVTTAIISGTTAVCLKFPSDSIPSNKQPQLMHYEDDRWVDITTA----VENNAVCGMTQSFSPFAV 576
            TP G ++ +T    TT++    F +V T G TTVT    G P    PS F+LG  P+YY I TTA+ +G   VC  +   +  +     L H     W +IT A      NN +CG T S SPF +
Sbjct:  496 TPAGTNITVTPTPATTLI----FDNVNTTGNTTVTTSGTGAPP---PSGFNLGNQPLYYEITTTALFTGMIKVCFNYDESNYGNENLLSLFHLSGSVWENITIAGYPDTTNNIICGYTTSLSPFII 614          
BLAST of NO06G00010 vs. NCBI_GenBank
Match: XP_005853387.1 (hypothetical protein NGA_0694300 [Nannochloropsis gaditana CCMP526] >EKU22974.1 hypothetical protein NGA_0694300 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 74.3 bits (181), Expect = 1.700e-9
Identity = 36/92 (39.13%), Postives = 53/92 (57.61%), Query Frame = 0
Query:  471 VGNITFADVTTIGITTVTPKDPGDPTYVVPSEFSLGEPPIYYSIVTTAIISGTTAVCLKFPSDSIPSNKQPQLMHYEDDRWVDITTAVENNA 563
            VG  +    +   + TV P D  DP +V PS FSLG PP+Y  I TTA+  G  A+CL +   + P   +P+L H+ +D W D+TT V++ +
Sbjct:   18 VGTFSLQMSSARTVVTVIP-DISDPLFVPPSNFSLGNPPVYKFINTTAVFDGDAALCLSYSQSTFPMGTEPRLFHFINDAWEDVTTDVDSES 108          
BLAST of NO06G00010 vs. NCBI_GenBank
Match: KKT81992.1 (hypothetical protein UW79_C0012G0002 [Candidatus Yanofskybacteria bacterium GW2011_GWA2_44_9])

HSP 1 Score: 73.2 bits (178), Expect = 3.900e-9
Identity = 46/117 (39.32%), Postives = 63/117 (53.85%), Query Frame = 0
Query:  467 GTTVVG-----NITF-ADVTTIGITTVTPKDPGDPTYVVPSEFSLGEPPIYYSIVTTAIISGTTAVCLKFPSDSIPSNKQPQLMHYEDDRWVDITTAVE--NNAVCGMTQSFSPFAV 576
            G+ VVG      ITF   VT  G TTVT    G P    P+ F LG PP+YYSI TTA  +    VC+ +      S    +L H +   W ++TT+++  +N +CG+T SFS FA+
Sbjct:  318 GSPVVGPLSGVTITFVGGVTQEGQTTVTTSGTGQPP---PTGFKLGTPPVYYSISTTATFTAPVEVCINWIEGQFNSENNLKLWHSDGVVWTNVTTSLDTASNIICGLTNSFSDFAI 431          
BLAST of NO06G00010 vs. NCBI_GenBank
Match: OGN15243.1 (hypothetical protein A3B99_02045 [Candidatus Yanofskybacteria bacterium RIFCSPHIGHO2_02_FULL_44_12b])

HSP 1 Score: 73.2 bits (178), Expect = 3.900e-9
Identity = 46/117 (39.32%), Postives = 63/117 (53.85%), Query Frame = 0
Query:  467 GTTVVG-----NITF-ADVTTIGITTVTPKDPGDPTYVVPSEFSLGEPPIYYSIVTTAIISGTTAVCLKFPSDSIPSNKQPQLMHYEDDRWVDITTAVE--NNAVCGMTQSFSPFAV 576
            G+ VVG      ITF   VT  G TTVT    G P    P+ F LG PP+YYSI TTA  +    VC+ +      S    +L H +   W ++TT+++  +N +CG+T SFS FA+
Sbjct:  305 GSPVVGPLSGVTITFVGGVTQEGQTTVTTSGTGQPP---PTGFKLGTPPVYYSISTTATFTAPVEVCINWIEGQFNSENNLKLWHSDGVVWTNVTTSLDTASNIICGLTNSFSDFAI 418          
BLAST of NO06G00010 vs. NCBI_GenBank
Match: OGN26905.1 (hypothetical protein A2925_01380 [Candidatus Yanofskybacteria bacterium RIFCSPLOWO2_01_FULL_44_22])

HSP 1 Score: 73.2 bits (178), Expect = 3.900e-9
Identity = 46/117 (39.32%), Postives = 63/117 (53.85%), Query Frame = 0
Query:  467 GTTVVG-----NITF-ADVTTIGITTVTPKDPGDPTYVVPSEFSLGEPPIYYSIVTTAIISGTTAVCLKFPSDSIPSNKQPQLMHYEDDRWVDITTAVE--NNAVCGMTQSFSPFAV 576
            G+ VVG      ITF   VT  G TTVT    G P    P+ F LG PP+YYSI TTA  +    VC+ +      S    +L H +   W ++TT+++  +N +CG+T SFS FA+
Sbjct:  706 GSPVVGPLSGVTITFVGGVTQEGQTTVTTSGTGQPP---PTGFKLGTPPVYYSISTTATFTAPVEVCINWIEGQFNSENNLKLWHSDGVVWTNVTTSLDTASNIICGLTNSFSDFAI 819          
BLAST of NO06G00010 vs. NCBI_GenBank
Match: PKK82978.1 (hypothetical protein CVT49_10970 [candidate division Zixibacteria bacterium HGW-Zixibacteria-1])

HSP 1 Score: 72.0 bits (175), Expect = 8.600e-9
Identity = 56/165 (33.94%), Postives = 82/165 (49.70%), Query Frame = 0
Query:  420 PWITSYKDDPGKDTLPGFWPIDILLGAPAGEPTPTPEGVDVKLTFFNGTTVVGNITFADVTTIGITTVTPKDPG---DPTYVVPSEFSLGEPPIYYSIVTTAIISGTTAVCLKFPSDSIPSNKQP--QLMHYEDDRWVDITTAVE--NNAVCGMTQSFSPFAVGY 578
            PWI  Y  D G D               AGE   TPEG +V +    G +V  ++TF DV T G T +T    G       ++P++      PIYY+I TTA  SG   VC+ +    +  +++   +L+HY+   W DIT + +  +N +CG ++S SPF VGY
Sbjct: 1023 PWI--YNPDQGGDC------------TFAGE---TPEGTNVIVPL--GLSV--DLTFGDVLTAGTTEMTMSYTGPGVSGLQIIPADL-----PIYYNITTTAGYSGLIEVCVDYDDAGMSPSQENMLRLIHYDGTDWADITASADTASNTICGTSESLSPFVVGY 1161          
BLAST of NO06G00010 vs. NCBI_GenBank
Match: WP_104060153.1 (carboxypeptidase regulatory-like domain-containing protein [Arthrobacter sp. 4R501])

HSP 1 Score: 72.0 bits (175), Expect = 8.600e-9
Identity = 56/135 (41.48%), Postives = 65/135 (48.15%), Query Frame = 0
Query:  458 VDVKLTFFNGTTVVGNI----------TFADVTTIGITTVTPKDPGDPTYVVPSEFSLGEPPIYYSIVTTAIISGT--TAVCLKFPSDSIPSNKQ--PQLMHYEDDRWVDIT-TAVENNA-VCGMTQSFSPFAVG 577
            VD  LT F    VV  +           FADV T GITTVT    GD  Y      SL  PP+YY I TTA+ S      VC+ F + ++   +     L HY    W DIT TA+     VCG T SFSPFAVG
Sbjct:  327 VDPSLTIFGTDVVVAPVDNDGRTDVALKFADVGTPGITTVTRLGSGD-AYPDGGFSSLTNPPLYYDIETTAVFSPALGVLVCITFDTSAMTEEQAAGQHLYHYVGGAWADITDTALSGTGKVCGRTTSFSPFAVG 460          
The following BLAST results are available for this feature:
BLAST of NO06G00010 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 18
Match NameE-valueIdentityDescription
KKR54111.14.100e-1138.58hypothetical protein UT88_C0003G0007 [Candidatus W... [more]
XP_005852440.12.000e-1043.48elicitin-like protein 6 precursor, partial [Nannoc... [more]
WP_025739800.13.500e-1034.38hypothetical protein [Aquimarina pacifica][more]
OGO12509.14.600e-1036.51hypothetical protein A2Y53_01885, partial [Chlorof... [more]
XP_005853387.11.700e-939.13hypothetical protein NGA_0694300 [Nannochloropsis ... [more]
KKT81992.13.900e-939.32hypothetical protein UW79_C0012G0002 [Candidatus Y... [more]
OGN15243.13.900e-939.32hypothetical protein A3B99_02045 [Candidatus Yanof... [more]
OGN26905.13.900e-939.32hypothetical protein A2925_01380 [Candidatus Yanof... [more]
PKK82978.18.600e-933.94hypothetical protein CVT49_10970 [candidate divisi... [more]
WP_104060153.18.600e-941.48carboxypeptidase regulatory-like domain-containing... [more]

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Relationships

The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO06G00010.1NO06G00010.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO06G00010.1NO06G00010.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO06G00010 ID=NO06G00010|Name=NO06G00010|organism=Nannochloropsis oceanica|type=gene|length=2626bp
CTCAAAACACAGGAAAAAATCTTGACCCATGATGATCATTACTTGGCGTA
ATCAGCCTCTGGGCCTTTTGCTTGTCGGTGCGGTGATCTCCTACGGAAGT
CTTGCATGCGACCTAAATGTTCCTAATCAATATCTCTCAGTCGGTCTCGC
TGTCTCTAGTGCATCCAATGGCGATGTTATCTGTGTGGCACCAGGAGTCT
ATAATGATGCTTACTTTGACCTTGCCACCAAGGGATTGACACTGAAAGGG
GCCCAAGCGGGCGTCGATGCTCGTACTCGCCCGGCCAAACATTGGTCGGA
AGGGGACTCTTACCCCGCAGAAGAAACAGTGTTTACCCACAATGGAGGTC
ACTTTTTCACTATTGCTAGGGGGATAGGTGCGACTGTTGATGGCATATTC
ATGCCTAATATGGGACGCCGTGCAATGGATGATAATTTCGGCAGACAATC
CGACGTGGTCAGTTTGACAGTCAAAAATAGCATTTTCAAGTCCACCGAGA
CTTACACGGGTAATCAAAATGGCAATGTTCAATTTGCGGCAGGCTTCGAT
GCATCAGCGAACAACGTGACCTTTGAACGTAATTACATTGAGACATTTAC
CACTACCTTCCTGTACGCACCCTCGCCGAGATGTAACGATTGGATAATCA
AAGACAATGAGATCGTGAGCTACTATTTCGCGTTTGGCCCATTTGCCGGG
GACCGAGATGGCTTTCCTGGTGGGTTTGTGATACAGGGAAACAATTTTAA
GGGAACCATTCCTGGTAATCCTCCTCCTCGAGCAGATTCTCCTGAGGGAT
ATGATGCCCTAGCATTTAATGCTGTCCTGGGTAATGCGATTATCACAGAA
AATACATTCGACAAGATTATCCGCGGTCTTGGGTCAGTTTGGTTATACGA
CGCCATTGTTCACGGGAACAATTTGACAGATAATTATTTGAGTGCTTTAG
CACTCTGGAGCAGTGATACTTCGAACCCACCCAAGCCCCCTTCAAGCAAT
GTTATTATCTCGAACAATATTATTGAATACAATGGCACGCCTCAAGGCGA
TGACGAAAATTTTTTATCAAACGGAATTTTCATCAACCGCAATGCTGGTG
GAGTCTTACGTGTCAATGCTTCCACTATACATATTAACGATAATCGCCTT
ACCAATTTGGGCATCAGTGGTACCTCGCAAGTATGGGCGATCCTGCAAAA
TGGGGTGGACAACGCCCAAGCCAAAACAAACTTCTGGGGATCGAGCCCAA
GTGACATAAATGTGCGAGGAAATGTGGTAACATCTCCGTGGATTACCTCG
TACAAGGACGATCCCGGCAAGGACACCCTTCCCGGCTTCTGGCCTATCGA
CATTCTTCTAGGTGCTCCAGCTGGTGAGCCTACTCCCACACCAGAGGGAG
TCGATGTAAAATTGACATTTTTCAATGGTACTACTGTTGTCGGGAACATC
ACATTCGCTGATGTGACTACCATCGGGATCACGACCGTGACCCCCAAGGA
CCCTGGTGATCCGACGTATGTAGTACCTTCCGAGTTCAGTCTGGGAGAAC
CCCCAATTTATTATTCCATCGTCACTACAGCCATAATTTCGGGTACCACT
GCCGTCTGTTTAAAGTTCCCGTCGGATTCTATTCCCTCCAATAAGCAGCC
TCAACTTATGCATTACGAGGACGATCGATGGGTTGATATTACAACAGCTG
TTGAAAACAACGCTGTCTGCGGCATGACTCAGTCTTTTAGTCCATTTGCC
GTAGGATACGGTTTTCCAACAACACTGGAAGATCTCCTAAGCGTCACGAA
GGTCACCTTTGTCAACAATAAGAAATGGAATTTACATGGATACTTAAATC
TAGATGAGGCGCCCGATATTCTGGCCAGTATTAATGCGGAAGGACTTTCC
TGCACTGTCATGGATTCGGAAGGAGAGGTAATTGATGCATTTGCGACCGC
GACATTCGGGGGAAGTGATTGTCGTCCCAGGTCTGGGCGGAAGGAGATGG
CATGTATTCGAAAGGGCGTGGGAACCACCACCTTCATACGAATGAAAGGG
TCTGCTGTCTACAAAATAATTGTCAGGATTCGCAATAAAACTACACTGGT
ACTCCCAAGGACGTCCGAGACACCACTTCAGGTAAAACTCACCATACCTG
GCTCTACAACGGCCTATCTGGATGATACTGTCGGTAATTGCACCACTAGG
GGGAAAGGACGAGTTCTCAAATGCCGCGGATCGTAAAACTCAATATCCTT
TCCTCCGCAACTAATAATCGACATCATTTAATCCTTGAATGTCACTGTCA
TGTGACCAGAATCAAATATTGTCTCCAAAATCCACTCAGCGAATTGTGAA
TGCCTTCTTTATTGCATAACAAAGTATCCTCCCAAGAATTACTCATTTCC
TCTCCGGGACATCCTCAAATTATGTTATGTAATCGCCTCCCTATTTACCA
AGGTAACCTCCAACGATCTTGATTATTATTATTGCCTTACAATTATTATC
TCTCCAAGAGACATTGAATTTCCCTCAAGGACCCCCTAGATCTATTAAGT
CGATTTGATTTATCTATCATCAAGATTGTATCCAACAATATCTTAAAAGA
AGGAATTCCAACGACCAACAGTACGG
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protein sequence of NO06G00010.1

>NO06G00010.1-protein ID=NO06G00010.1-protein|Name=NO06G00010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=736bp
MMIITWRNQPLGLLLVGAVISYGSLACDLNVPNQYLSVGLAVSSASNGDV
ICVAPGVYNDAYFDLATKGLTLKGAQAGVDARTRPAKHWSEGDSYPAEET
VFTHNGGHFFTIARGIGATVDGIFMPNMGRRAMDDNFGRQSDVVSLTVKN
SIFKSTETYTGNQNGNVQFAAGFDASANNVTFERNYIETFTTTFLYAPSP
RCNDWIIKDNEIVSYYFAFGPFAGDRDGFPGGFVIQGNNFKGTIPGNPPP
RADSPEGYDALAFNAVLGNAIITENTFDKIIRGLGSVWLYDAIVHGNNLT
DNYLSALALWSSDTSNPPKPPSSNVIISNNIIEYNGTPQGDDENFLSNGI
FINRNAGGVLRVNASTIHINDNRLTNLGISGTSQVWAILQNGVDNAQAKT
NFWGSSPSDINVRGNVVTSPWITSYKDDPGKDTLPGFWPIDILLGAPAGE
PTPTPEGVDVKLTFFNGTTVVGNITFADVTTIGITTVTPKDPGDPTYVVP
SEFSLGEPPIYYSIVTTAIISGTTAVCLKFPSDSIPSNKQPQLMHYEDDR
WVDITTAVENNAVCGMTQSFSPFAVGYGFPTTLEDLLSVTKVTFVNNKKW
NLHGYLNLDEAPDILASINAEGLSCTVMDSEGEVIDAFATATFGGSDCRP
RSGRKEMACIRKGVGTTTFIRMKGSAVYKIIVRIRNKTTLVLPRTSETPL
QVKLTIPGSTTAYLDDTVGNCTTRGKGRVLKCRGS*
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Synonyms
Publications