NO05G05420, NO05G05420 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G05420 vs. NCBI_GenBank
Match: EWM27855.1 (thioesterase superfamily member 4 [Nannochloropsis gaditana]) HSP 1 Score: 299.3 bits (765), Expect = 1.300e-77 Identity = 161/231 (69.70%), Postives = 183/231 (79.22%), Query Frame = 0 Query: 57 TLRTSFPVLFAQLAAATAAVVAAISLPSPSLCETAHAGTEERRGERKAMREDGGKGEATSSATCNPSLFEHHDRVDTKLHRAYPEFLKFHLIHETLRGKEKIDGYEVYKDRRDDSIVAYARLGKLLSGHPDIIHGGSIAALLDNTMGVAFFAAKRGNGFTANLTINYKRPITCGTEVKVLARVEKVEGRKVFLRAEIRDAKDEAILYTEAKSLFITSQSPLLKGPKKIDIS 288 T +SF +L + A + A I+ TA A +E + ++ + GG T+ T +HDRVDTKLHRAYPEFL++HLIHETLRGKEKI+GYEVYKDRRDDSIVA+ARLGKLLSGHPDIIHGGSIAALLDNTMGVAFFAA +GNGFTANLTINYKRPI CGTE+KVLARVE++EGRKVFLRAEIRDAKDEA+LYTEA SLFITSQSPLL GPKK+DIS Sbjct: 52 TQNSSFSILLKTVVAGSFVGAAFIA------GHTAGASCDEVKSPQE-VNNVGGGAPVTAPYTVT-FASNYHDRVDTKLHRAYPEFLQYHLIHETLRGKEKIEGYEVYKDRRDDSIVAFARLGKLLSGHPDIIHGGSIAALLDNTMGVAFFAANKGNGFTANLTINYKRPIICGTEIKVLARVERIEGRKVFLRAEIRDAKDEAVLYTEATSLFITSQSPLLTGPKKVDIS 274
BLAST of NO05G05420 vs. NCBI_GenBank
Match: XP_005852768.1 (thioesterase superfamily member 4 [Nannochloropsis gaditana CCMP526] >EKU23063.1 thioesterase superfamily member 4 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 297.7 bits (761), Expect = 3.800e-77 Identity = 161/231 (69.70%), Postives = 182/231 (78.79%), Query Frame = 0 Query: 57 TLRTSFPVLFAQLAAATAAVVAAISLPSPSLCETAHAGTEERRGERKAMREDGGKGEATSSATCNPSLFEHHDRVDTKLHRAYPEFLKFHLIHETLRGKEKIDGYEVYKDRRDDSIVAYARLGKLLSGHPDIIHGGSIAALLDNTMGVAFFAAKRGNGFTANLTINYKRPITCGTEVKVLARVEKVEGRKVFLRAEIRDAKDEAILYTEAKSLFITSQSPLLKGPKKIDIS 288 T +SF +L + A + A I+ TA A +E + ++ + GG T+ T +HDRVDTKLHRAYPEFL++HLIHETLRGKEKI+GYEVYKDRRDDSIVA+ARLGKLLSGHPDIIHGGSIAALLDNTMGVAFFAA +GNGFTANLTINYKRPI CGTE+KVLARVE+ EGRKVFLRAEIRDAKDEA+LYTEA SLFITSQSPLL GPKK+DIS Sbjct: 52 TQNSSFSILLKTVVAGSFVGAAFIA------GHTAGASCDEVKSPQE-VNNVGGGAPVTAPYTVT-FASNYHDRVDTKLHRAYPEFLQYHLIHETLRGKEKIEGYEVYKDRRDDSIVAFARLGKLLSGHPDIIHGGSIAALLDNTMGVAFFAANKGNGFTANLTINYKRPIICGTEIKVLARVERFEGRKVFLRAEIRDAKDEAVLYTEATSLFITSQSPLLTGPKKVDIS 274
BLAST of NO05G05420 vs. NCBI_GenBank
Match: XP_004349120.1 (hypothetical protein CAOG_02370 [Capsaspora owczarzaki ATCC 30864] >KJE91205.1 hypothetical protein CAOG_002370 [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 96.3 bits (238), Expect = 1.700e-16 Identity = 51/129 (39.53%), Postives = 73/129 (56.59%), Query Frame = 0 Query: 147 LIHETLRGKEKIDGYEVYKDRRDDSIVAYARLGKLLSGHPDIIHGGSIAALLDNTMGVAFFAAKRGNGFTANLTINYKRPITCGTEVKVLARVEKVEGRKVFLRAEIRDAKDEAILYTEAKSLFITSQS 276 L E L G K + E+Y + D V +LG + GHPD IHGG+I D T+G F G G+TANL INY++P+ + V A V++VEGRKVFL A + D ++Y +A +LF+ ++ Sbjct: 228 LTFEALYGPGKFENVEMYHNPTDLQFVGMFKLGNRICGHPDTIHGGAIGVAFDETLGWLFMLT-AGVGYTANLNINYRKPLPALHTIVVKAHVDRVEGRKVFLHATLEDL--HGLVYADAAALFVVPRN 353
BLAST of NO05G05420 vs. NCBI_GenBank
Match: ORX95267.1 (Thioesterase/thiol ester dehydrase-isomerase [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 96.3 bits (238), Expect = 1.700e-16 Identity = 53/127 (41.73%), Postives = 79/127 (62.20%), Query Frame = 0 Query: 147 LIHETLRGKEKID-GYEVYKDRRDDSIVAYARLGKLLSGHPDIIHGGSIAALLDNTMGVAFFAAKRG-NGFTANLTINYKRPITCGTEVKVLARVEKVEGRKVFLRAEIRDAKDEAILYTEAKSLFI 272 L TL+GK+K+ ++++ +++S+V LGK L GH IIHGG +A LLD + F + G NG TANL INY++P+ V + ARV KVEGRK ++ A+++D K ++ EA +LFI Sbjct: 126 LTRYTLKGKDKLALDPVIFRNDKENSLVIVTHLGKALCGHKGIIHGGLLATLLDEGLAATVFPSMPGKNGVTANLNINYRKPVLADQFVSINARVTKVEGRKGWVEAQVKDMKGNVLV--EASALFI 250
BLAST of NO05G05420 vs. NCBI_GenBank
Match: XP_003479092.1 (LOW QUALITY PROTEIN: acyl-coenzyme A thioesterase THEM4 [Cavia porcellus]) HSP 1 Score: 92.8 bits (229), Expect = 1.800e-15 Identity = 60/150 (40.00%), Postives = 86/150 (57.33%), Query Frame = 0 Query: 132 DTKLHRAYPEFLKFHLIHETLRGKEKI-----DG----YEVYKDRRDDSIVAYARLGKLLSGHPDIIHGGSIAALLDNTMGVAFFAAKRGNGFTANLTINYKRPITCGTEVKVLARVEKVEGRKVFLRAEIRDAKDEAILYTEAKSLFIT 273 D K H P+ LK E + G + DG Y ++ + ++ +V + + G L G P HGG+IAA++D T+G F A RG TANL INYKRPI + V + ++++KVEGRKVF+ ++R K+E LY+EA LFIT Sbjct: 86 DFKTHYVDPKLLK----EEQMPGAQLFTRSFEDGLGFEYVMFCNDVENRVVCFFQGGPHLQGMPGFTHGGAIAAIIDATVGTCAFRA-RGIVMTANLNINYKRPIPLXSVVVINSQLDKVEGRKVFVSCDVRSVKEET-LYSEATGLFIT 229
BLAST of NO05G05420 vs. NCBI_GenBank
Match: XP_007428866.1 (PREDICTED: acyl-coenzyme A thioesterase THEM4 isoform X1 [Python bivittatus] >XP_015743660.1 PREDICTED: acyl-coenzyme A thioesterase THEM4 isoform X1 [Python bivittatus]) HSP 1 Score: 91.7 bits (226), Expect = 4.100e-15 Identity = 63/180 (35.00%), Postives = 93/180 (51.67%), Query Frame = 0 Query: 105 MREDGGKGEATSSATCNPSLFEHHDRVDTKLHRAYPEFLKFHLIHETLRGKEKIDGYEVYKDRRDDSIVAYARLGKLLSGHPDIIHGGSIAALLDNTMGVAFFAAKRGNGFTANLTINYKRPITCGTEVKVLARVEKVEGRKVFLRAEIRDAKDEAILYTEAKSLFITSQSPLLKGPKKI 285 M +DG + S + E H+R + + R L I E G E Y ++ + + +V ++LG L G HGGS+A LLD+T+G R TANL+INYK P+ G+ V +R++K+EGRK+F+ EIR A D IL+ EA +LFI +S +L K + Sbjct: 71 MTKDGSWQKLPSYRSFYEHFPEGHERCELQKRR---NRLFLRSIDEEGMGFE----YVMFLNATEKRMVCLSQLGPYLEGPSGFAHGGSLATLLDSTLGGCAICVNR-RVLTANLSINYKNPVALGSVVLAESRLDKIEGRKIFVSGEIRSA-DRQILHAEATALFIQLESSILPQEKTV 241
BLAST of NO05G05420 vs. NCBI_GenBank
Match: OXV11181.1 (hypothetical protein Egran_01054 [Elaphomyces granulatus]) HSP 1 Score: 91.7 bits (226), Expect = 4.100e-15 Identity = 58/148 (39.19%), Postives = 83/148 (56.08%), Query Frame = 0 Query: 131 VDTKLHRAYPEFLKFH-LIHETLRGKEKI--DGYEVYKDRRDDSIVAYARLGKLLSGHPDIIHGGSIAALLDNTMGVAFFAA-KRGNGFTANLTINYKRPITCGTEVKVLARVEKVEGRKVFLRAEIR---DAKDEAILYTEAKSLFI 272 V+++ H PE L+ LI TL G KI Y + ++ S V+ LG +SGHPDI+HGG +A +LD MG+ F A G G TANL I+YKRP+ T + A KV GRK ++ I + +E +++ EAK+LF+ Sbjct: 140 VESRPHLKIPEGLRSRTLIAGTLAGSNKIVVPPYS-WSEKAGKSTVSIYYLGSDISGHPDIVHGGLLATILDEGMGICCFGALPSGFGVTANLNIDYKRPVPTNTYAVLKAETVKVAGRKAWVEGRIESLPEKGEEPVVFVEAKALFV 286
BLAST of NO05G05420 vs. NCBI_GenBank
Match: ORX92776.1 (Thioesterase/thiol ester dehydrase-isomerase, partial [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 90.9 bits (224), Expect = 7.000e-15 Identity = 50/131 (38.17%), Postives = 79/131 (60.31%), Query Frame = 0 Query: 147 LIHETLRGKEKIDGYE-VYKDRRDDSIVAYARLGKLLSGHPDIIHGGSIAALLDNTMGVAFFAAKRGN-GFTANLTINYKRPITCGTEVKVLARVEKVEGRKVFLRAEIRDAKDEAILYTEAKSLFITSQS 276 L+ TL G+ K++ +++ + +V LG L GH I+HGG +A+LLD+T+G G+ GFTANL+INY+RP V + VEKVEGRK F++ + D KD ++ ++++LFI+ +S Sbjct: 2 LLWNTLHGEGKLELEPLIFRSADEKKVVMIVYLGSKLCGHKGIVHGGMLASLLDDTLGRTIIPNLPGSVGFTANLSINYRRPTFADDFVVIKTEVEKVEGRKGFVKGHVEDTKDNVLV--DSQALFISPKS 130
BLAST of NO05G05420 vs. NCBI_GenBank
Match: XP_008618768.1 (hypothetical protein SDRG_14419 [Saprolegnia diclina VS20] >EQC27835.1 hypothetical protein SDRG_14419 [Saprolegnia diclina VS20]) HSP 1 Score: 89.7 bits (221), Expect = 1.600e-14 Identity = 47/126 (37.30%), Postives = 70/126 (55.56%), Query Frame = 0 Query: 146 HLIHETLRGKEKIDGYEVYKDRRDDSIVAYARLGKLLSGHPDIIHGGSIAALLDNTMGVAFFAAKRGNGFTANLTINYKRPITCGTEVKVLARVEKVEGRKVFLRAEIRDAKDEAILYTEAKSLFI 272 H IH + K + + VY D ++ G+ L GH I+HGG I+ + D G + GFTANL +N+++P+ T V +E++EGRKV+L+A+++DA E YTEA SLFI Sbjct: 63 HYIHSLSDIQGKYEEFMVYGDVAKTQTISLVHFGEKLCGHTGIVHGGCISTVCDELFGWTMYWIMDKAGFTANLNVNFRKPLPAQTLAIVTTELERIEGRKVYLKAKVQDA--EGNTYTEATSLFI 186
BLAST of NO05G05420 vs. NCBI_GenBank
Match: ORX47679.1 (Thioesterase/thiol ester dehydrase-isomerase [Hesseltinella vesiculosa]) HSP 1 Score: 89.7 bits (221), Expect = 1.600e-14 Identity = 52/131 (39.69%), Postives = 77/131 (58.78%), Query Frame = 0 Query: 151 TLRGKEK-IDGYEVYKDRRDDSIVAYARLGKLLSGHPDIIHGGSIAALLDNTMG-VAFFAAKRGNGFTANLTINYKRPITCGTEVKVLARVEKVEGRKVFLRAEIRDAKDEAILYTEAKSLFITSQSPLLK 280 +LRGK K + V+ ++ + LGK L GH I+HGG +A LLD + VA + GFTANL I+Y+RP+T V + +++KVEGRK F+RA I D + + EA SL+++ +SPL + Sbjct: 59 SLRGKGKLVVSPAVFYNKDQTEVTVVTHLGKQLCGHDGIVHGGMLATLLDEVLAFVAMPSLPNKVGFTANLNIDYRRPVTSHQWVVLKGQLDKVEGRKAFVRAWIEDL-EGTTKFVEATSLYVSPKSPLAR 188 The following BLAST results are available for this feature:
BLAST of NO05G05420 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G05420 ID=NO05G05420|Name=NO05G05420|organism=Nannochloropsis oceanica|type=gene|length=1569bpback to top protein sequence of NO05G05420.2 >NO05G05420.2-protein ID=NO05G05420.2-protein|Name=NO05G05420.2|organism=Nannochloropsis oceanica|type=polypeptide|length=216bpback to top protein sequence of NO05G05420.1 >NO05G05420.1-protein ID=NO05G05420.1-protein|Name=NO05G05420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=288bpback to top Synonyms
Publications
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