NO05G05390, NO05G05390 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO05G05390 vs. NCBI_GenBank
Match: EWM27858.1 (major facilitator superfamily mfs_1 [Nannochloropsis gaditana]) HSP 1 Score: 597.4 bits (1539), Expect = 5.100e-167 Identity = 328/472 (69.49%), Postives = 366/472 (77.54%), Query Frame = 0 Query: 94 MTNRRTVAALGKIRGGASSKAKVPPSSQALAQADAKKRS-IPSSSSPATGSKTSKEAELDLGPPSTLTLKNAPPALRMLNGVFVRTDWDHNGRAHYEKVMTQDEVALAMENSSSSEEKQVVHLYWHGSQWVLHLDLDPALNYDSYLGYCKVNHRDPGRTDRLWLLREKKKWVPSPALRVHVVGRHYEGEEXXXXXXXXXXXXXXXXXXPRLVPVFVAFFLDAIGTGLASPLLPFYIMSLGANAFQLGLVLAFNYLAQTMGCIVMGSISDKYGRRQVMLCCLVASFVSLSLVARAKTLPQVAFGRVIGGMFGGFVPLAQSAVADLVPVEGRAKFLGRIQACMGAGFVAGPALGLLGSRVFELDSRGILKRAAILPAVSFCYASVFIKETKASVLLDRARRSQGNIGSSTSXXXXXTTARPTPLSTPMDENVAFPILPVRLLVLNGFLLMYAFSVETVYAMFIKVREEGVGKGE 565 MT R+ + L ++RGGAS A+V PS ADAKKR + SSSSP G+ + DLGPPSTLT KNAP +LRM+NGVF+RT WDHNGRAHYEKVMT +E+ LA E S +EE++VVHLYWHGSQWVLHLDLDPALNYD+YLGYCKVN RDPGRTDR WLLRE KKW+P+ +LRVHV GR YE E PRLVPVF+AFFLDA+GTGLASPLLPFYIMSLGANAFQLGLVLAFNYLAQT+GCIVMGSISD+ GRRQVMLCCL+ASFVSLSLVARAKTLPQVA GRVIGGMFGGFVPLAQSAVADLVPVEGRAKFLGRIQACMGAGFVAGP LGLLGSR LDSRGILKRAAILPA++F Y VFIKETK +V +DR + + + +S + + P L + P PVRLL+LNGFLLMYAFSVETVYAMFIK + G GE Sbjct: 91 MTGRQGI-HLARMRGGASRAARVSPS----PAADAKKRQPVASSSSPKDGALSE-----DLGPPSTLTFKNAPSSLRMINGVFIRTAWDHNGRAHYEKVMTSEEMTLAQELSVFAEERRVVHLYWHGSQWVLHLDLDPALNYDNYLGYCKVNSRDPGRTDRSWLLRENKKWLPATSLRVHVPGRQYEKRE---ESASAAAALASIPTPPRLVPVFIAFFLDAVGTGLASPLLPFYIMSLGANAFQLGLVLAFNYLAQTIGCIVMGSISDRCGRRQVMLCCLMASFVSLSLVARAKTLPQVAIGRVIGGMFGGFVPLAQSAVADLVPVEGRAKFLGRIQACMGAGFVAGPLLGLLGSRGLHLDSRGILKRAAILPALAFSYGLVFIKETKDAVAIDRTFQKKDSSAASLA-------SSPPSLPKAKGAGWSIPSFPVRLLILNGFLLMYAFSVETVYAMFIK---DNFGYGE 539
BLAST of NO05G05390 vs. NCBI_GenBank
Match: WP_054521828.1 (MFS transporter [Thermanaerothrix daxensis] >KPL82356.1 MFS transporter [Thermanaerothrix daxensis]) HSP 1 Score: 110.5 bits (275), Expect = 1.900e-20 Identity = 67/190 (35.26%), Postives = 107/190 (56.32%), Query Frame = 0 Query: 302 RLVPVFVAFFLDAIGTGLASPLLPFYIMSLGANAFQLGLVLAFNYLAQTMGCIVMGSISDKYGRRQVMLCCLVASFVSLSLVARAKTLPQVAFGRVIGGMFGGFVPLAQSAVADLVPVEGRAKFLGRIQACMGAGFVAGPAL-GLLGSRVFELDSRGILKRAAILPAVSFCYASVFIKETKASVLLDRAR 491 RL +F+ F+D +G GL PLLP+Y + GA F++GL++A AQ +G ++G +SD+ GRR V+L + + V L+A A++L + R++ G GG + +AQ+ ++D+ RA+ LG I A G GF+ GPAL GLL F + + G AA L ++F ++ E+ + AR Sbjct: 7 RLSSIFLIVFIDLLGFGLILPLLPYYAETFGATDFEVGLLVAVYAAAQFVGTPLLGRLSDRVGRRPVLLISIAGNLVGFVLLALAQSLEMLFVARILAGFTGGNISVAQAYISDVTDARSRARGLGLIGAAFGLGFIIGPALGGLLSQWGFAVPALG----AAALSLINFLLVVAWLPESLTAQARQDAR 192
BLAST of NO05G05390 vs. NCBI_GenBank
Match: OLC59785.1 (hypothetical protein AUH89_05490, partial [Ktedonobacter sp. 13_1_40CM_4_52_4]) HSP 1 Score: 109.8 bits (273), Expect = 3.200e-20 Identity = 61/137 (44.53%), Postives = 85/137 (62.04%), Query Frame = 0 Query: 308 VAFFLDAIGTGLASPLLPFYIMSLGANAFQLGLVLAFNYLAQTMGCIVMGSISDKYGRRQVMLCCLVASFVSLSLVARAKTLPQVAFGRVIGGMFGGFVPLAQSAVADLVPVEGRAKFLGRIQACMGAGFVAGPALG 445 + F+D G GL PLLPF+ LGANA +GL+L LAQ + ++GS+SD+YGRR V++ L +S +L A A TLP + R IGG+ + AQ+ V+D+ P + RA+ +G I A +G GFV GPALG Sbjct: 14 LTIFIDFTGFGLVIPLLPFWAEHLGANAVGVGLILTIYALAQFIFTPILGSLSDRYGRRPVIIASLTIEAISFALSALANTLPFLLIARFIGGLGASNIGSAQAVVSDVTPPKERARGMGLIGAAIGLGFVVGPALG 150
BLAST of NO05G05390 vs. NCBI_GenBank
Match: WP_097645037.1 (MFS transporter [Chloroflexi bacterium Kir15-3F] >PDW02118.1 hypothetical protein CJ255_15660 [Chloroflexi bacterium Kir15-3F]) HSP 1 Score: 107.8 bits (268), Expect = 1.200e-19 Identity = 65/195 (33.33%), Postives = 107/195 (54.87%), Query Frame = 0 Query: 303 LVPVFVAFFLDAIGTGLASPLLPFYIMSLGANAFQLGLVLAFNYLAQTMGCIVMGSISDKYGRRQVMLCCLVASFVSLSLVARAKTLPQVAFGRVIGGMFGGFVPLAQSAVADLVPVEGRAKFLGRIQACMGAGFVAGPALGLLGSRVFELDSRGILKRAAILPAVSFCYASVFIKETKASVLLDRARRSQGNIG 498 L+ +F+ F+D +G G+ PLLPFY +GA+ Q+GL++ AQ + +MG++SD++GRR++++ + + ++ A TLP + GR +GG+ G + +AQ+ ++D+ + RA+ L I A G GFV GP +G L + E AA + A+S A +F+KE RRS G G Sbjct: 6 LLVIFLVVFVDLLGFGIILPLLPFYAEDMGASEVQVGLLMMIYSAAQMVAAPIMGNLSDRFGRRRLLIVSQIGTVAGFLILGLATTLPMLFVGRFVGGIMAGSITVAQAYISDVTDEQNRARGLALIGAAFGLGFVLGPVIGGL---LAEFGYHVPALLAAGVAALSLILALIFLKEPP-------QRRSSGRGG 190
BLAST of NO05G05390 vs. NCBI_GenBank
Match: PIR26186.1 (tetracycline resistance MFS efflux pump [Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23] >PJA18142.1 tetracycline resistance MFS efflux pump [Deltaproteobacteria bacterium CG_4_10_14_0_2_um_filter_43_8] >PJC65206.1 tetracycline resistance MFS efflux pump [Deltaproteobacteria bacterium CG_4_9_14_0_2_um_filter_42_21]) HSP 1 Score: 107.8 bits (268), Expect = 1.200e-19 Identity = 68/189 (35.98%), Postives = 106/189 (56.08%), Query Frame = 0 Query: 302 RLVPVFVAFFLDAIGTGLASPLLPFYIMSLGANAFQLGLVLAFNYLAQTMGCIVMGSISDKYGRRQVMLCCLVASFVSLSLVARAKTLPQVAFGRVIGGMFGGFVPLAQSAVADLVPVEGRAKFLGRIQACMGAGFVAGPALGLL------GSRVFELDSRGILKRAAILPAVSFCYASVFIKETKASV 485 +L+ VF+ F+D +G G+ P+LP+Y S GA+A+ +G+++ Q + + GS+SDK GRR VML CLV +SL ++ A +L + R+ G+FG V A + +AD+ +E RAK +G I A G GF+ GPA+G + G+ F AAI +SF +A +KE + S+ Sbjct: 4 KLLIVFLVVFIDLLGFGIIIPILPYYADSFGASAYDVGMLMVCYSAMQFLFSPLWGSLSDKVGRRPVMLFCLVGMMLSLVVLGFAPSLMWLYIARIFSGIFGANVSTASAYIADVTTIEDRAKGMGLIGAAFGLGFLVGPAVGGMLSKWGYGTAAF---------AAAIFSGLSFLFALWKLKEPQLSM 183
BLAST of NO05G05390 vs. NCBI_GenBank
Match: PHY11442.1 (tetracycline resistance MFS efflux pump [Acidobacterium sp.]) HSP 1 Score: 107.1 bits (266), Expect = 2.100e-19 Identity = 61/148 (41.22%), Postives = 90/148 (60.81%), Query Frame = 0 Query: 303 LVPVFVAFFLDAIGTGLASPLLPFYIMSLGANAFQLGLVLAFNYLAQTMGCIVMGSISDKYGRRQVMLCCLVASFVSLSLVARAKTLPQVAFGRVIGGMFGGFVPLAQSAVADLVPVEGRAKFLGRIQACMGAGFVAGPALGLLGSRV 451 LV +F+ F+D +G G+ PLLPFY S GA+A +GL+ L Q + + G SDK GR+ ++L L+ S +S +A A +LP + R+IGG+ G +P AQ+ +AD+ E RAK +G + A G GF+ GPA+G L SR+ Sbjct: 4 LVIIFITVFIDLLGFGIIIPLLPFYAESFGASALTIGLLGTSFSLMQFVFSPIWGRWSDKIGRKPIILLGLMGSCLSYLTLALATSLPMLFVARIIGGIAGANIPTAQAYIADVTTPENRAKGMGMVGAAFGLGFIFGPAIGGLLSRI 151
BLAST of NO05G05390 vs. NCBI_GenBank
Match: WP_007980722.1 (tetracycline resistance MFS efflux pump [Haladaptatus paucihalophilus] >EFW91634.1 multidrug resistance protein [Haladaptatus paucihalophilus DX253] >SHL22340.1 Predicted arabinose efflux permease, MFS family [Haladaptatus paucihalophilus DX253]) HSP 1 Score: 106.7 bits (265), Expect = 2.700e-19 Identity = 92/270 (34.07%), Postives = 136/270 (50.37%), Query Frame = 0 Query: 303 LVPVFVAFFLDAIGTGLASPLLPFYIMSLGANAFQLGLVLAFNYLAQTMGCIVMGSISDKYGRRQVMLCCLVASFVSLSLVARAKTLPQVAFGRVIGGMFGGFVPLAQSAVADLVPVEGRAKFLGRIQACMGAGFVAGPALGLLGSRVFELDSRGILKRAAILPAV---------SFCYASVFIKETKASVLLDRARRSQGNIGSSTSXXXXXTTARPTPLSTPMDENVAFPILPVRLLVLNGFLLMYAFSVETVYAMFIKVREEGVGKG 564 L VF F+D +G G+ P++P Y GAN F +GL+LA + Q + V+G +SD+ GRR ++L L S V+ +L A++L + R++ G GG + AQ+ +AD+ P E RAK LG I A G GFV GPALG +F D+ L R +LPAV SF A++ + L+ R++ + T T R + L+ D AF + LV + FLL AFS ++ +MF+ E+ G G Sbjct: 10 LATVFAIVFVDLLGFGILIPIIPLYAEHFGANEFVVGLLLASYSVMQFLFAPVLGRLSDERGRRPILLLSLFGSVVAWTLFGLAESLLVLFVARILAGAMGGNIATAQAYIADITPPEDRAKGLGLIGAAFGLGFVFGPALG----GIFSSDAALSLAR-NVLPAVVPVNQFSLPSFAAAAICGLNLVVAALVLPETRTKRDSDEET------TDERQSRLARLAD---AFADPALAGLVASFFLLSLAFS--SMESMFVLFTEQQYGFG 263
BLAST of NO05G05390 vs. NCBI_GenBank
Match: WP_069451350.1 (MFS transporter [Haladaptatus sp. W1] >ODR81051.1 MFS transporter [Haladaptatus sp. W1]) HSP 1 Score: 106.7 bits (265), Expect = 2.700e-19 Identity = 92/270 (34.07%), Postives = 136/270 (50.37%), Query Frame = 0 Query: 303 LVPVFVAFFLDAIGTGLASPLLPFYIMSLGANAFQLGLVLAFNYLAQTMGCIVMGSISDKYGRRQVMLCCLVASFVSLSLVARAKTLPQVAFGRVIGGMFGGFVPLAQSAVADLVPVEGRAKFLGRIQACMGAGFVAGPALGLLGSRVFELDSRGILKRAAILPAV---------SFCYASVFIKETKASVLLDRARRSQGNIGSSTSXXXXXTTARPTPLSTPMDENVAFPILPVRLLVLNGFLLMYAFSVETVYAMFIKVREEGVGKG 564 L VF F+D +G G+ P++P Y GAN F +GL+LA + Q + V+G +SD+ GRR ++L L S V+ +L A++L + R++ G GG + AQ+ +AD+ P E RAK LG I A G GFV GPALG +F D+ L R +LPAV SF A++ + L+ R++ + T T R + L+ D AF + LV + FLL AFS ++ +MF+ E+ G G Sbjct: 10 LATVFAIVFVDLLGFGILIPIIPLYAEHFGANEFVVGLLLASYSVMQFLFAPVLGRLSDERGRRPILLLSLFGSVVAWTLFGLAESLLVLFVARILAGAMGGNIATAQAYIADITPPEDRAKGLGLIGAAFGLGFVFGPALG----GIFSSDAALSLAR-NVLPAVVPVNQFSLPSFAAAAICGLNLVVAALVLPETRTKRDSDEET------TDERQSRLARLAD---AFADPALAGLVASFFLLSLAFS--SMESMFVLFTEQQYGFG 263
BLAST of NO05G05390 vs. NCBI_GenBank
Match: WP_052050471.1 (MFS transporter [Leptolyngbya sp. KIOST-1]) HSP 1 Score: 106.3 bits (264), Expect = 3.500e-19 Identity = 57/144 (39.58%), Postives = 86/144 (59.72%), Query Frame = 0 Query: 301 PRLVPVFVAFFLDAIGTGLASPLLPFYIMSLGANAFQLGLVLAFNYLAQTMGCIVMGSISDKYGRRQVMLCCLVASFVSLSLVARAKTLPQVAFGRVIGGMFGGFVPLAQSAVADLVPVEGRAKFLGRIQACMGAGFVAGPALG 445 PRLV +F+ D +G L P+LPF + ++AF LG++++ +AQ + V+G++SD+YGRR VML C++ + +S + A TL + F R++ G+ GG AQ+ +AD+ P E RAK G A G GF GPA G Sbjct: 14 PRLVFIFITILFDKLGESLIFPILPFLVGRFQSDAFTLGMLVSSYAIAQFIAIPVIGALSDRYGRRPVMLVCVLGTAISYFIFGFATTLWMLFFSRILDGVTGGVAATAQAYIADISPPEDRAKNFGITGAAFGLGFTLGPAAG 157
BLAST of NO05G05390 vs. NCBI_GenBank
Match: OLC17662.1 (hypothetical protein AUH38_05340 [Deltaproteobacteria bacterium 13_1_40CM_68_24] >OLC74593.1 hypothetical protein AUH83_09480 [Deltaproteobacteria bacterium 13_1_40CM_4_68_19] >OLD10971.1 hypothetical protein AUI90_00045 [Deltaproteobacteria bacterium 13_1_40CM_3_69_14] >OLD45787.1 hypothetical protein AUI48_11130 [Chloroflexi bacterium 13_1_40CM_2_68_14] >OLE63484.1 hypothetical protein AUG04_05010 [Deltaproteobacteria bacterium 13_1_20CM_2_69_21]) HSP 1 Score: 106.3 bits (264), Expect = 3.500e-19 Identity = 90/269 (33.46%), Postives = 132/269 (49.07%), Query Frame = 0 Query: 306 VFVAFFLDAIGTGLASPLLPFYIMSLGANAFQLGLVLAFNYLAQTMGCIVMGSISDKYGRRQVMLCCLVASFVSLSLVARAKTLPQVAFGRVIGGMFGGFVPLAQSAVADLVPVEGRAKFLGRIQACMGAGFVAGPALG--------LLGSRVFELDSRGI-LKRAAILPAVSFCYASVFIKETKASVLLDRARRSQGNIGSSTSXXXXXTTARPTPLSTPMDENVAFPILPVRLLVLNGFLLMYAFS-VETVYAMFIKVREEGVGKGE 565 +FV FLD +G G+ P L +Y+ S GA A +GL+++ LAQ + V G +SD+ GRR ++L L S +L A TL + GRV+ G+FG +P AQ+AVAD+ + RA+ +G I A +G GF+ GPALG +L +FE + + +A L A + A+ F+ E S+ DR G S + T R +RLLVL FL M F+ +E +FI E +G G+ Sbjct: 14 LFVTVFLDLVGFGIIIPFLAYYVESFGARAAVVGLLMSSYSLAQFLFAPVWGRVSDRVGRRPILLLGLTGSVAGFTLFGLAGTLGLLFVGRVLMGIFGATIPTAQAAVADVTAPQDRARGMGLIGAAIGLGFILGPALGGVLSNLSSVLRLPLFEHNPYALPCLASAALAAFNLIAAAFFLPE---SLPHDRRGSHSGEGFSRIAILSRGLTDR-----------------RLRLLVLVYFLFMLGFTMMEATLTLFI---ERRIGAGD 259 The following BLAST results are available for this feature:
BLAST of NO05G05390 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G05390 ID=NO05G05390|Name=NO05G05390|organism=Nannochloropsis oceanica|type=gene|length=4764bpback to top protein sequence of NO05G05390.1 >NO05G05390.1-protein ID=NO05G05390.1-protein|Name=NO05G05390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=727bpback to top protein sequence of NO05G05390.2 >NO05G05390.2-protein ID=NO05G05390.2-protein|Name=NO05G05390.2|organism=Nannochloropsis oceanica|type=polypeptide|length=634bpback to top protein sequence of NO05G05390.3 >NO05G05390.3-protein ID=NO05G05390.3-protein|Name=NO05G05390.3|organism=Nannochloropsis oceanica|type=polypeptide|length=634bpback to top Synonyms
Publications
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