NO05G05220, NO05G05220 (gene) Nannochloropsis oceanica
|
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO05G05220 vs. NCBI_GenBank
Match: CBN80135.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 107.1 bits (266), Expect = 2.900e-19 Identity = 56/149 (37.58%), Postives = 87/149 (58.39%), Query Frame = 0
Query: 592 ASALANKNQAQNRVLLEGNVELWLPSRFLGSLYKSWVPFHLVLYAGTKEIRLYQSSIPSAWGIIPLHEKGTLELRLLEKIECPTDPQWGGRRFDLVVRASSSAAVDAKYPGLGVYPGDEKRATHTARYNFRSQTAQNRLLWVSLITAVL 741
A ++ + +LLEG+++ + P G W + VLYA E+R Y++ +AWG IPL E+G++ LRL+ KIE P+D ++ G RFDLVV ++++PGL + PG E R T + F + AQ RLLWV++I A++
Sbjct: 673 AGVSETRHSTKQGILLEGDLQKFSPESMRG---VRWHKRYFVLYACACELRYYRTHAEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYRGCRFDLVVLHKG----ESRHPGLHIRPGQESRVRTTKTFKFNAADAQQRLLWVTVIEALM 814
BLAST of NO05G05220 vs. NCBI_GenBank
Match: CCA21733.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 80.5 bits (197), Expect = 2.900e-11 Identity = 64/266 (24.06%), Postives = 116/266 (43.61%), Query Frame = 0
Query: 538 RTYWRRNKEDSDRQALQSRTVDPALRAVM--DGLDHLSGTPRPQLQGLLLTAQDNAASALANKNQAQNRVLLEGNV-----------------------ELWLPSRFLGSL--YKSWVPFHLVLYAGTKEIRLYQSSIPSAWGIIPLHEKGTLELRLLEKIECPTDPQWGGRRFDLVVRASSSAAVDAKY---------PGL-----GVYPGDEKRATHTARYNFRSQTAQNRLLWVSLITAVLDSCSAPPSSSSRERTLTLAPHD 763
R + N+ D +A +S A+R +M D +D+ + P+ + ++ T Q++A + + + N A + G++ E WL + + K W P + V+YA T E+R Y + SAWG+IPL E G++ RL++ +E + P++ G RFD+ R S Y PG+ G+ GD+ +++ T Y+ + + Q LW S + +++ P + R H+
Sbjct: 189 RALLQENETARDLEAGESILQRKAIRTIMEKDNVDNSAAKPQALARHVVKTWQNSALTPIGHGNPAGSPKASSGSIRGIARQDKTLDARAGNSASGVILEGWLRQKQRRGVKGLKKWNPRYYVVYA-TNEVRYYADMVASAWGVIPLQEIGSISARLMQNVEKLSHPKYKGCRFDITCRNSWGTHYADDYVSPDGASILPGIHPNEDGIAKGDKTKSS-TRVYSLIADSPQTASLWASTLNSLMTQNQFSPKAKVRRNKSNQVKHE 452
BLAST of NO05G05220 vs. NCBI_GenBank
Match: CCI42843.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 80.1 bits (196), Expect = 3.700e-11 Identity = 59/197 (29.95%), Postives = 92/197 (46.70%), Query Frame = 0
Query: 585 LTAQDNAASALANKNQAQNRVLLEGNVELWLPSRFLGSL--YKSWVPFHLVLYAGTKEIRLYQSSIPSAWGIIPLHEKGTLELRLLEKIECPTDPQWGGRRFDLVVRAS---------SSAAVDAKYPGLGVYP-----GDEKRATHTARYNFRSQTAQNRLLWVSLITAVLDSCSAPPSSSSRERTLTLAPHDPAP 766
+T Q+ A A K ++N V+LEG WL + + K W + V+YA T EIR Y + SAWG IPL+E G++ RL++ +E + P++ G RFD+ R S S + PG+ Y GD +++ T Y+ + + Q LWVS+I +++ P R+ AP
Sbjct: 251 ITGQNKTLGAFAGK--SENGVVLEG----WLRQKQRRGVKGLKKWNSRYYVVYAETNEIRYYADLVASAWGSIPLNEIGSISARLIQNVEKLSHPKYKGCRFDIKCRNSWGTHYADDYVSHDSSSSLPGIRPYENGDTIGDSTKSS-TRVYSLIADSPQTASLWVSMIASLILPSPGSPKGEVRDHISNRVGDKSAP 440
BLAST of NO05G05220 vs. NCBI_GenBank
Match: OQS04462.1 (hypothetical protein THRCLA_03310 [Thraustotheca clavata]) HSP 1 Score: 76.6 bits (187), Expect = 4.100e-10 Identity = 49/149 (32.89%), Postives = 73/149 (48.99%), Query Frame = 0
Query: 605 VLLEGNVELWLPSRFLGSL--YKSWVPFHLVLYAGTKEIRLYQSSIPSAWGIIPLHEKGTLELRLLEKIECPTDPQWGGRRFDLVVRASSSAAVDAKYPGLG----------VYPGDEKRATHTAR-YNFRSQTAQNRLLWVSLITAVL 741
VLLEG WL + + K W + VLYA E+R Y + S WG IPL E G++ LRL+++I P+ P++ G RFD+ R+SSS D L P K +R Y+ + + Q +LWV+ + ++L
Sbjct: 190 VLLEG----WLRQKQRRGIRGLKKWNSRYFVLYAKVHELRYYSDVVQSGWGPIPLGEIGSISLRLIQRISKPSHPKYKGCRFDITCRSSSSGVPDLDDDPLSSDDEAKKASPKQPPKIKTTPKASRVYSLIADSPQTTVLWVNTLDSLL 334
BLAST of NO05G05220 vs. NCBI_GenBank
Match: XP_009833246.1 (hypothetical protein H257_08874 [Aphanomyces astaci] >ETV77459.1 hypothetical protein H257_08874 [Aphanomyces astaci]) HSP 1 Score: 73.2 bits (178), Expect = 4.600e-9 Identity = 68/229 (29.69%), Postives = 102/229 (44.54%), Query Frame = 0
Query: 526 PRDSEAASLITGRTYWRRNKEDSDRQALQSRTVDPALRAVMDGLDHLSGTPRPQLQGLLLTAQDNAASAL--ANKNQAQNRVLLEGNVELWLPSRFLGSL--YKSWVPFHLVLYAGTKEIRLYQSSIPSAWGIIPLHEKGTLELRLLEKIECPTDPQWGGRRFDLVVRASSSAAV---DAKYPGLGVYPGDEK-----RATHTARYNF--RSQTAQNRLLWVSLITAVL 741
P DS + G RR+ S R L++ + D L + P Q +L A AL A + VLLEG WL + L K+W + VL+ E+R Y + S WG IPL+E G + LR +++I P+ P++ G RFD+ R S+ A D GL V GDE+ + T A F S + Q+ + WV+++ ++L
Sbjct: 180 PPDSAPVASSAGPVLQRRH---SSRMILRASSTDTPLAPTPE------DEPDDAFQLNVLHALSPGRGALGGAIPGVPGSGVLLEG----WLRQKQRRGLRGLKAWNSRYFVLFKNPNEMRYYTDVVQSGWGPIPLNELGCISLRSIQRISKPSHPKYKGCRFDITCRLPSTTAATTGDYDVDGL-VSSGDERDKPASKTTPRATREFCLVSDSPQSTVTWVAMLDSLL 394
BLAST of NO05G05220 vs. NCBI_GenBank
Match: XP_009833247.1 (hypothetical protein, variant [Aphanomyces astaci] >ETV77460.1 hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 73.2 bits (178), Expect = 4.600e-9 Identity = 68/229 (29.69%), Postives = 102/229 (44.54%), Query Frame = 0
Query: 526 PRDSEAASLITGRTYWRRNKEDSDRQALQSRTVDPALRAVMDGLDHLSGTPRPQLQGLLLTAQDNAASAL--ANKNQAQNRVLLEGNVELWLPSRFLGSL--YKSWVPFHLVLYAGTKEIRLYQSSIPSAWGIIPLHEKGTLELRLLEKIECPTDPQWGGRRFDLVVRASSSAAV---DAKYPGLGVYPGDEK-----RATHTARYNF--RSQTAQNRLLWVSLITAVL 741
P DS + G RR+ S R L++ + D L + P Q +L A AL A + VLLEG WL + L K+W + VL+ E+R Y + S WG IPL+E G + LR +++I P+ P++ G RFD+ R S+ A D GL V GDE+ + T A F S + Q+ + WV+++ ++L
Sbjct: 180 PPDSAPVASSAGPVLQRRH---SSRMILRASSTDTPLAPTPE------DEPDDAFQLNVLHALSPGRGALGGAIPGVPGSGVLLEG----WLRQKQRRGLRGLKAWNSRYFVLFKNPNEMRYYTDVVQSGWGPIPLNELGCISLRSIQRISKPSHPKYKGCRFDITCRLPSTTAATTGDYDVDGL-VSSGDERDKPASKTTPRATREFCLVSDSPQSTVTWVAMLDSLL 394
BLAST of NO05G05220 vs. NCBI_GenBank
Match: XP_008874835.1 (hypothetical protein H310_10275 [Aphanomyces invadans] >ETV96572.1 hypothetical protein H310_10275 [Aphanomyces invadans]) HSP 1 Score: 68.6 bits (166), Expect = 1.100e-7 Identity = 45/149 (30.20%), Postives = 71/149 (47.65%), Query Frame = 0
Query: 605 VLLEGNVELWLPSRFLGSL--YKSWVPFHLVLYAGTKEIRLYQSSIPSAWGIIPLHEKGTLELRLLEKIECPTDPQWGGRRFDLVVRASSS--AAVDAKYPGLGVYPGDEKRATHTAR---------YNFRSQTAQNRLLWVSLITAVL 741
VLLEG WL + + KSW + VL+ E+R Y + S WG IPL E G + LR +++I P+ P++ G RFD+ R S+ A+ Y GDE + A+ + S + Q + WV+++ ++L
Sbjct: 271 VLLEG----WLRQKQRRGIRGLKSWNSRYFVLFKNPNEMRYYSDVVQSGWGPIPLGELGCISLRSIQRISKPSHPKYKGCRFDITCRLPSATIASNTGDYDEGVFSSGDEDKKDKPAKTTPKAATREFCLVSDSPQTTVTWVTMLDSLL 415
BLAST of NO05G05220 vs. NCBI_GenBank
Match: XP_008874836.1 (hypothetical protein, variant [Aphanomyces invadans] >ETV96573.1 hypothetical protein, variant [Aphanomyces invadans]) HSP 1 Score: 68.6 bits (166), Expect = 1.100e-7 Identity = 45/149 (30.20%), Postives = 71/149 (47.65%), Query Frame = 0
Query: 605 VLLEGNVELWLPSRFLGSL--YKSWVPFHLVLYAGTKEIRLYQSSIPSAWGIIPLHEKGTLELRLLEKIECPTDPQWGGRRFDLVVRASSS--AAVDAKYPGLGVYPGDEKRATHTAR---------YNFRSQTAQNRLLWVSLITAVL 741
VLLEG WL + + KSW + VL+ E+R Y + S WG IPL E G + LR +++I P+ P++ G RFD+ R S+ A+ Y GDE + A+ + S + Q + WV+++ ++L
Sbjct: 271 VLLEG----WLRQKQRRGIRGLKSWNSRYFVLFKNPNEMRYYSDVVQSGWGPIPLGELGCISLRSIQRISKPSHPKYKGCRFDITCRLPSATIASNTGDYDEGVFSSGDEDKKDKPAKTTPKAATREFCLVSDSPQTTVTWVTMLDSLL 415
BLAST of NO05G05220 vs. NCBI_GenBank
Match: XP_009520466.1 (hypothetical protein PHYSODRAFT_482775 [Phytophthora sojae] >EGZ25178.1 hypothetical protein PHYSODRAFT_482775 [Phytophthora sojae]) HSP 1 Score: 65.9 bits (159), Expect = 7.300e-7 Identity = 36/89 (40.45%), Postives = 51/89 (57.30%), Query Frame = 0
Query: 605 VLLEGNVELWLPSRFLGSL--YKSWVPFHLVLYAGTKEIRLYQSSIPSAWGIIPLHEKGTLELRLLEKIECPTDPQWGGRRFDLVVRAS 692
VLLEG WL + + K W + VLYA + E+R Y + SAWG IPL E G++ LRL+++I + P++ G RFD+ R S
Sbjct: 324 VLLEG----WLRQKQRRGIKGLKKWNSRYFVLYARSNEVRYYADVVQSAWGPIPLGEIGSISLRLIQRIGKLSHPKYKGCRFDITCRNS 408
BLAST of NO05G05220 vs. NCBI_GenBank
Match: ETI46803.1 (hypothetical protein F443_08882 [Phytophthora parasitica P1569]) HSP 1 Score: 65.9 bits (159), Expect = 7.300e-7 Identity = 36/89 (40.45%), Postives = 51/89 (57.30%), Query Frame = 0
Query: 605 VLLEGNVELWLPSRFLGSL--YKSWVPFHLVLYAGTKEIRLYQSSIPSAWGIIPLHEKGTLELRLLEKIECPTDPQWGGRRFDLVVRAS 692
VLLEG WL + + K W + VLYA + E+R Y + SAWG IPL E G++ LRL+++I + P++ G RFD+ R S
Sbjct: 375 VLLEG----WLRQKQRRGIKGLKKWNSRYFVLYAWSNEVRYYADVVQSAWGPIPLGEIGSISLRLIQRIGKLSHPKYKGCRFDITCRNS 459 The following BLAST results are available for this feature:
BLAST of NO05G05220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G05220 ID=NO05G05220|Name=NO05G05220|organism=Nannochloropsis oceanica|type=gene|length=2915bpback to top protein sequence of NO05G05220.1 >NO05G05220.1-protein ID=NO05G05220.1-protein|Name=NO05G05220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=874bpback to top Synonyms
Publications
|