NO05G05040, NO05G05040 (gene) Nannochloropsis oceanica

Overview
NameNO05G05040
Unique NameNO05G05040
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1507
Alignment locationchr5:1314243..1315749 +

Link to JBrowse

Properties
Property NameValue
DescriptionPyruvate kinase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:1314243..1315749 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf
IPR009737Suc_Fer-like
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0005488binding
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0008152metabolic process
Homology
BLAST of NO05G05040 vs. NCBI_GenBank
Match: EWM27895.1 (pyruvate kinase [Nannochloropsis gaditana])

HSP 1 Score: 307.4 bits (786), Expect = 5.500e-80
Identity = 148/237 (62.45%), Postives = 178/237 (75.11%), Query Frame = 0
Query:   67 VNPEATMAGTVKLYDRHVFVLDPVRGHELWPTHVEESSFLLIADYKKAQKALTAAA-GAAGTVGKMFTLKFTVAEALGHALAAPSDEENPAITFKDHGLHTVLLFSPTAPSLAIRGLTKADIPTLVKLLVTKENYSAALPSALPSQVIIQPLPGKDLFVCAHASRDIRCKTCGPRLVGWLKEEAIKAAKSGSGEDEVRIWPSSHVGGHMHAGNVLVFPSGDWYGQVNDPAKAQLVLE 303
            +N  A MAGTV+ YDRHVF+LDP RGHE WPT++EES FLL+ADY +AQ+AL  AA   +G   + +TLKF VAEAL H L APSD+E+    FKD GLHT+L+FSP  PSLA+RGLTKADIP LVKLL +  +Y   LP+ALP+ V +Q L GKD+FVCAHASRD RCK CGP LV WL+EE         G+D+VR+WPSSHVGGH HA N LVFP GDWYG+VN   KA+++LE
Sbjct:   51 INDAAPMAGTVRRYDRHVFILDPFRGHENWPTYLEESRFLLVADYMQAQRALLMAAHSRSGEQERAWTLKFNVAEALNHPLGAPSDDEDAINAFKDRGLHTILIFSPCTPSLAVRGLTKADIPALVKLLHSVADYPTTLPTALPTHVAVQNLAGKDIFVCAHASRDARCKACGPPLVKWLREEV-----DMRGKDQVRVWPSSHVGGHAHAANALVFPGGDWYGRVNSKEKAKILLE 282          
BLAST of NO05G05040 vs. NCBI_GenBank
Match: XP_012204604.1 (hypothetical protein SPRG_10258 [Saprolegnia parasitica CBS 223.65] >KDO24724.1 hypothetical protein SPRG_10258 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 120.6 bits (301), Expect = 9.600e-24
Identity = 77/257 (29.96%), Postives = 127/257 (49.42%), Query Frame = 0
Query:   72 TMAGTVKLYDRHVFVLDPVRGHELWPTHVEESSFLLIADYKKAQKALTAAAGAAGTVGKMFTLKFTVAEALGHALAAPSDEENPAITFKDHGLHTVLLFSPTAPSLAIRGLTKADIPTLVKLLVTKENYSAALPSALPSQVIIQPLPGKDLFVCAHASRDIRCKTCGPRLVGWLKEEAIKAAKSGSGEDEVRIWPSSHVGGHMHAGNVLVFPSGDWYGQVNDPAKAQLVLEKKGVEDD---LKKLWRGRIGLNQMQQ 326
            ++AG+V+ + RH+ +L+P    E WP  +E++  +L A      K  T                  +  ++ H  A  ++  + A+T      H  L+F     +L +R +   D+P + + L+ +E    AL + L     + PL GK +FVCAHA+RD RC   GP+L+ W++ +            E + + +SH GGH  AGN +V P G+WYG VN  ++  L    +G+  D   +  LWRGR+GL++  Q
Sbjct:   11 SIAGSVQNHRRHLILLEPSLSAEAWPKKIEQTDHILAAYSAITDKVNTKECA-------------QLVVSVAHPGATNANATSDAMT------HDALVF---PDNLRLRNIRAEDVPFVAESLLQEEIDLGALQARL----TVAPLQGKHVFVCAHANRDFRCACAGPKLIEWIEIDI----------PEWQAYATSHYGGHRFAGNCIVHPDGEWYGHVN--SRDALEQVHRGITTDSPVVADLWRGRLGLSKADQ 229          
BLAST of NO05G05040 vs. NCBI_GenBank
Match: XP_008617022.1 (hypothetical protein SDRG_12718 [Saprolegnia diclina VS20] >EQC29470.1 hypothetical protein SDRG_12718 [Saprolegnia diclina VS20])

HSP 1 Score: 120.2 bits (300), Expect = 1.200e-23
Identity = 77/257 (29.96%), Postives = 129/257 (50.19%), Query Frame = 0
Query:   72 TMAGTVKLYDRHVFVLDPVRGHELWPTHVEESSFLLIADYKKAQKALTAAAGAAGTVGKMFTLKFTVAEALGHALAAPSDEENPAITFKDHGLHTVLLFSPTAPSLAIRGLTKADIPTLVKLLVTKENYSAALPSALPSQVIIQPLPGKDLFVCAHASRDIRCKTCGPRLVGWLKEEAIKAAKSGSGEDEVRIWPSSHVGGHMHAGNVLVFPSGDWYGQVNDPAKAQLVLEKKGVEDD---LKKLWRGRIGLNQMQQ 326
            ++AG+V  + RH+ +L+P    E WP  +E++  +L A Y      +     A   V            ++ H  A  +D    A T      H  L+F     ++ +R +   D+  + + L+ ++        AL ++V + PL GK +FVCAHA+RD RC   GP+L+ W++++            E + + +SH GGH  AGN +V P+G+WYG VN  ++  L    +G++DD   +  LWRGR+GL++  Q
Sbjct:   11 SIAGSVLSHRRHLILLEPSLSAEAWPKKIEQTDHIL-ATYSAITDKINTKERAQLVV------------SVAHPGATNADATPDAAT------HDALVF---PENIRLRNIRAEDVTFVTETLLQED----VDMDALQARVTVAPLQGKHVFVCAHANRDFRCACAGPKLIEWIEKDI----------PEWQAYATSHYGGHRFAGNCIVHPNGEWYGHVN--SRDALDQVHRGIKDDSPVVADLWRGRLGLSKADQ 229          
BLAST of NO05G05040 vs. NCBI_GenBank
Match: XP_008861035.1 (hypothetical protein H310_00156 [Aphanomyces invadans] >ETW09624.1 hypothetical protein H310_00156 [Aphanomyces invadans])

HSP 1 Score: 119.0 bits (297), Expect = 2.800e-23
Identity = 83/256 (32.42%), Postives = 124/256 (48.44%), Query Frame = 0
Query:   72 TMAGTVKLYDRHVFVLDPVRGHELWPTHVEESSFLLIADYKKAQKALTAAAGAAGTVGKMFTLKFTVAEALGHALAAPSDEENPAITFKDHGLHTVLLFSPTAPSLAIRGLTKADIPTLVKLLVTKENYSAALPSALPSQVIIQPLPGKDLFVCAHASRDIRCKTCGPRLVGWLKEEAIKAAKSGSGEDEVRIWPSSHVGGHMHAGNVLVFPSGDWYGQVNDPAKAQLVLEKKGVEDD--LKKLWRGRIGLNQMQQ 326
            +MAG+V+ Y R + VLDP R  E WP  VEES+  +I+ Y               TV  + T K      L  A A P  ++    +      H VL+F     +L I G+  +D+  L   L+     +  LP  L S++ +  + G  +FVCAHA RD RC   GP+L+ W +       K  S E    I+  SH GGH  AGN +V+P G WYG +N P+   ++++   V+    +  LWRG +  ++ +Q
Sbjct:   23 SMAGSVQFYRRQLIVLDPQRDAEAWPKKVEESTTHVISKYH-------------NTVAPLNTEKSPTKLIL--ATAYPYGDDPAVESASSTDTHDVLVF---PDNLRISGVCDSDVDFLALHLLED---TLDLP-LLRSRLSVSEMSGHHVFVCAHAKRDFRCACAGPKLLEWFQ------TKRPSNETWT-IYACSHFGGHRFAGNCIVYPEGHWYGLMNHPSDVDILVQAITVDKQPVVPSLWRGCVNTSKAKQ 249          
BLAST of NO05G05040 vs. NCBI_GenBank
Match: XP_009830210.1 (hypothetical protein H257_06623 [Aphanomyces astaci] >ETV80286.1 hypothetical protein H257_06623 [Aphanomyces astaci])

HSP 1 Score: 118.2 bits (295), Expect = 4.700e-23
Identity = 79/261 (30.27%), Postives = 121/261 (46.36%), Query Frame = 0
Query:   72 TMAGTVKLYDRHVFVLDPVRGHELWPTHVEESSFLLIADYKKAQKALTAAAGAAGTVGKMFTLKFTVAEALGHALAAPSDEENPAITFKDHG-----LHTVLLFSPTAPSLAIRGLTKADIPTLVKLLVTKENYSAALPSALPSQVIIQPLPGKDLFVCAHASRDIRCKTCGPRLVGWLKEEAIKAAKSGSGEDEVRIWPSSHVGGHMHAGNVLVFPSGDWYGQVNDPAKAQLVLEKKGVEDD--LKKLWRGRIGLNQMQQ 326
            +MAG+V+ Y R +FV+D  R  E WP  +E+SS  +I+ Y    + L  A      +                 +AA    E  A T  D       +H VL+F     ++ I G+  +D+  +   L+ +    A+L S L    ++  L G  +FVCAH  RD RC   GP+L+ W + +            +  ++ SSH GGH  AGN +++P G WYG VNDP+    V+    V+    +  LWRG I  ++  Q
Sbjct:   26 SMAGSVQYYRRQMFVVDNNRNAEAWPKKLEDSSSHVISKYHHVVEPLNHAKNPKQLI-----------------MAAAYPVEQAADTIDDASYTSIDVHDVLVF---PDNIRIAGVRDSDVSFVATHLLDEVVDLASLRSRL----VVSELQGHHVFVCAHTQRDFRCACAGPKLIEWFQAKR---------PQDWTVFASSHYGGHRFAGNCIIYPEGHWYGLVNDPSDVDSVVHAVTVDKQPVVPSLWRGCINASKATQ 253          
BLAST of NO05G05040 vs. NCBI_GenBank
Match: XP_009527452.1 (hypothetical protein PHYSODRAFT_559259 [Phytophthora sojae] >EGZ18394.1 hypothetical protein PHYSODRAFT_559259 [Phytophthora sojae])

HSP 1 Score: 116.3 bits (290), Expect = 1.800e-22
Identity = 78/262 (29.77%), Postives = 124/262 (47.33%), Query Frame = 0
Query:   75 GTVKLYDRHVFVLDPVR-GHELWPTHVEESSFLLIADYKKAQKALTAAAGAAGTVGKMFTLKFTVAEALGHALAAPSDEENPAITFKDHGLHTVLLFSPTAPSLAIRGLTKADIPTLVKLLVTKENYSAALPSALPSQVI--IQPLPGKDLFVCAHASRDIRCKTCGPRLVGWLKEEAIKAAKSGSGEDEVRIWPSSHVGGHMHAGNVLVFPSGDWYGQVNDPAKAQLVLEKKGVEDDLK--KLWRGRIGLNQMQQDELVSE 332
            G+ + Y RH  +++P       WP  +E S   +++ Y     AL    G      K   L  T A       +    E   +    + G H VL+F      + +  +  + I TLV   + K+     +P  L  + +   +   G  + VC HA+RD RC   GP L+ WLK  A +A K       + +W SSH GGH +A   +V+PSGDW+G +N+  KA+ +++    ED L+  +LWRGR+GL +++  + V E
Sbjct:   69 GSARSYQRHYVIVEPQNTDPNAWPAKLERSPEHILSSY---MGALAKVYGWDVMKVKKSPLMVTAAIPYTGVCSGGMKEVEESTEDAEEGAHDVLVF---PDGVRVHNVVPSKISTLVSNSLKKD---LDMPKLLEQENLQYTRIEEGYHMMVCGHAARDERCGCKGPELLEWLKSSASEANK------PLNLWTSSHYGGHRYAAACIVYPSGDWFGLLNEKDKAKGMIDAMNDEDPLRLFELWRGRMGLTELEMHQAVKE 315          
BLAST of NO05G05040 vs. NCBI_GenBank
Match: OQR99909.1 (hypothetical protein THRCLA_06341 [Thraustotheca clavata])

HSP 1 Score: 116.3 bits (290), Expect = 1.800e-22
Identity = 78/260 (30.00%), Postives = 124/260 (47.69%), Query Frame = 0
Query:   72 TMAGTVKLYDRHVFVLDPVRGHELWPTHVEESSFLLIADYKKAQKALTAAAGAAGTVGKMFTLKFTVAEALGHALAAPSDEENPAITFKDHGLHTVLLFSPTAPSLAIRGLTKADIPTLVKLLVTKENYSAALPSALPSQVIIQPLPGKDLFVCAHASRDIRCKTCGPRLVGWLKEEAIKAAKSGSGEDEVRIWPSSHVGGHMHAGNVLVFPSGDWYGQVNDPAKAQ----LVLEKKGVEDDLKKLWRGRIGLNQMQQDE 328
            ++AG+V+ + RH+ +L+     E WP  +E+S  +L ADY K  +   +   A   V            ++ H  A  +  E P         H  L+F     ++ +  +  A++P +   L+ ++        +L   V + PL G  +FVCAHA+RD RC   GP+L+ W++          S   +  ++  SH GGH +AGN +V P G+WYG VN     Q     + +KK +  D   LWRGRIGL++  Q E
Sbjct:   10 SIAGSVQKHRRHLILLESKLSAEAWPKRIEQSQHIL-ADYHKVIEPFNSKEFAKLVV------------SVAHPGATNTPHEKPT--------HEALVF---PENIRLSDIAPAEVPFVANALLEEK----VDIESLKQIVTVTPLSGNHVFVCAHANRDFRCACAGPKLIEWME----------SDTPDWNVYACSHFGGHRYAGNCIVQPDGEWYGHVNSREALQQIHKAIKDKKPIVPD---LWRGRIGLSKDDQLE 228          
BLAST of NO05G05040 vs. NCBI_GenBank
Match: XP_020675479.1 (uncharacterized protein LOC110094554 [Dendrobium catenatum])

HSP 1 Score: 116.3 bits (290), Expect = 1.800e-22
Identity = 89/266 (33.46%), Postives = 131/266 (49.25%), Query Frame = 0
Query:   72 TMAGTVKLYDRHVFVLDPVRGHELWPTHVEESSFLLIADYKKAQKALTAAAGAAGTVGKMFTLKFTVAEALGHALAAPSDEENPAITFKDHGLHTVLLFSPTAPSLAIRGLTKADIPTLVKLLVTKENYSAALPSALPSQVIIQPLPGKDLFVCAHASRDIRCKTCGPRLVGWLKEEAIKAAKSGSGEDEVRIWPSSHVGGHMHAGNVLVFP-------SGDWYGQVNDPAKAQLVLEKKGVEDDLKKLWRGRIGLNQMQQDELVS 331
            ++ GTV+LYDRHVF+    +  E W  +VE       A   +  + L AA  A     K  TL  T+  A   + ++  D               VL+F      +  R LT AD+   V+L++ K+  +  LP A      ++ L G  +FVCAH SRD RC  CGP L+   KEE          ED+V + P SH+GGH +AGNV++F        SG+WYG V+  A   L+ ++ G  + +  LWRG++GL+  +Q +  S
Sbjct:   91 SLVGTVQLYDRHVFLRH--KSPEFWLPNVES------AKSDRLPQLLAAALKARKGDMKKKTL-LTICGATDISDSSEGD---------------VLIF---PDRIGYRRLTDADVDNFVELVLVKD--TEWLPGA------VETLSGSYIFVCAHGSRDQRCGVCGPILIEKFKEEIYLRGL----EDQVFVSPCSHIGGHKYAGNVIIFSQSKTGEVSGNWYGYVSPDAIPMLLEQQIGKGEIIDHLWRGQMGLSVDEQKKAQS 317          
BLAST of NO05G05040 vs. NCBI_GenBank
Match: OQR97329.1 (hypothetical protein ACHHYP_12126 [Achlya hypogyna])

HSP 1 Score: 115.5 bits (288), Expect = 3.100e-22
Identity = 80/264 (30.30%), Postives = 124/264 (46.97%), Query Frame = 0
Query:   72 TMAGTVKLYDRHVFVLDPVRGHELWPTHVEESSFLLIADYKKAQKALTAAAGAAGTVGKMFTLKFTVAEA-LGHALAAPSDEENPAITFKDHGLHTVLLFSPTAPSLAIRGLTKADIPTLVKLLVTKENYSAALPSALPSQVIIQPLPGKDLFVCAHASRDIRCKTCGPRLVGWLKEEAIKAAKSGSGEDEVRIWPSSHVGGHMHAGNVLVFPSGDWYGQVNDPAKAQLVLEKKGVEDD---LKKLWRGRIGLNQMQQDELVSE 332
            ++AG+V+ + RH+ +L+P    E WP  +E+S  +L   ++   K           V      K  V+ A  G   +APS          D   H  L+F        IR    AD   +V   + +++       AL     +  L GK +FVCAHA+RD RC   GP+L+ W++++            E  ++ +SH GGH  AGN +V P G+WYG VN     Q V  + G++     +  LWRGR+GL++ QQ +  S+
Sbjct:   11 SVAGSVQNHRRHLILLEPSLSAEAWPKKIEQSDHILAKYHEVTDK-----------VNSKEHAKLVVSVAHRGATNSAPS---------PDPTTHDALVFPENIHLHNIR----ADSVHVVAQALIEDDVDI---DALSEHASVTALEGKHVFVCAHANRDFRCACAGPKLIDWIEKDI----------PEWTVYATSHYGGHRFAGNCIVHPDGEWYGHVNSREALQQV--QAGIDSKAPIVADLWRGRLGLSKAQQLDAYSK 235          
BLAST of NO05G05040 vs. NCBI_GenBank
Match: OVA07238.1 (Sucraseferredoxin-like [Macleaya cordata])

HSP 1 Score: 114.8 bits (286), Expect = 5.200e-22
Identity = 87/264 (32.95%), Postives = 132/264 (50.00%), Query Frame = 0
Query:   70 EATMAGTVKLYDRHVFVLDPVRGHELWPTHVEESSFLLIADYKKAQKALTAAAGAAGTVGKMFTLKFTVAEALGHALAAPSDEENPAITFKDHGLHTVLLFSPTAPSLAIRGLTKADIPTLVKLLVTKENYSAALPSALPSQVIIQPLPGKDLFVCAHASRDIRCKTCGPRLVGWLKEEAIKAAKSGSGEDEVRIWPSSHVGGHMHAGNVLVFP-------SGDWYGQVNDPAKAQLVLEKK-GVEDDLKKLWRGRIGLNQMQQ 326
            ++ + GTV++YDRHVF+    +  ++WP HVE       A++ +  + L+AA  A     K  T + T+ E  GH     S+ +             +L+F      +  R LT  D+ T V+ ++ K+  S  LP         + L G  +FVC+H SRD RC  CGP LV   KEE       G    +V + P SH+GGH +AGNV++F        +G WYG V  P    L+LE+  G  + + +LWRG++GL++  Q
Sbjct:   72 QSPLVGTVQIYDRHVFLC--YKNPQVWPPHVE------AAEFDRLPRLLSAALLARKVEMKKQT-RLTICE--GHDGTETSNGD-------------ILIF---PDMVRYRRLTHFDVDTFVEEVLVKD--SEWLPGT------PETLSGSYVFVCSHGSRDRRCGVCGPALVSRFKEEIDVRGLQG----QVSVSPCSHIGGHKYAGNVIIFSPNNDGVVTGHWYGYVT-PDDVPLLLEQHIGKGEIIDRLWRGQMGLSEEDQ 295          
The following BLAST results are available for this feature:
BLAST of NO05G05040 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27895.15.500e-8062.45pyruvate kinase [Nannochloropsis gaditana][more]
XP_012204604.19.600e-2429.96hypothetical protein SPRG_10258 [Saprolegnia paras... [more]
XP_008617022.11.200e-2329.96hypothetical protein SDRG_12718 [Saprolegnia dicli... [more]
XP_008861035.12.800e-2332.42hypothetical protein H310_00156 [Aphanomyces invad... [more]
XP_009830210.14.700e-2330.27hypothetical protein H257_06623 [Aphanomyces astac... [more]
XP_009527452.11.800e-2229.77hypothetical protein PHYSODRAFT_559259 [Phytophtho... [more]
OQR99909.11.800e-2230.00hypothetical protein THRCLA_06341 [Thraustotheca c... [more]
XP_020675479.11.800e-2233.46uncharacterized protein LOC110094554 [Dendrobium c... [more]
OQR97329.13.100e-2230.30hypothetical protein ACHHYP_12126 [Achlya hypogyna... [more]
OVA07238.15.200e-2232.95Sucraseferredoxin-like [Macleaya cordata][more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR078ncniR078Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003344NSK003344Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G05040.1NO05G05040.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|585340gene_3321Nannochloropsis oceanica (N. oceanica CCMP1779)gene
jgi.p|Nanoce1779_2|611491gene_10603Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100197g3gene2667Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G05040.1NO05G05040.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G05040 ID=NO05G05040|Name=NO05G05040|organism=Nannochloropsis oceanica|type=gene|length=1507bp
ACATCATACTGTGTATCCCTTGCTTCCTTTTACAACTCTTTGGTACAAAT
CCTAGAGACTGCAAACCGCCAAGAACGGGGATAAGGCGCGAGCCGTCTCG
TCGGCATCATCTCAGTCACAGCACCACCCACGGCCAGGCGAAAACGTCCT
CGCCTGTAGCGTTCAATGCTCTCCGCGACTTACTGCTGTTGTGTAATGCT
CACCATCAGCGTTGCTGCTCGGGCCTCCTTGTCCACCAACACCATGAGAC
GAACACTCCTTCTTCGTCCGTCGTCCCTTGCCACTGCCGCCTTTACAACT
ACCACCACTACCACCACCACCAACCCCACGATAAGGCGGCGTCGTCTCCT
TCGCCGTCGGGCCGTCAACCCCGAAGCAACCATGGCTGGTACTGTCAAGT
TGTATGATCGACATgtacgttttggatattccttttctcgtcctttggga
tttgtttccggcgctaagcctcccattcacatacatagGTCTTCGTCTTG
GATCCCGTGCGTGGCCACGAGCTCTGGCCGACGCACGTGGAAGAGTCGTC
TTTCTTGCTGATCGCCGACTACAAGAAAGCACAAAAAGCGCTCACGGCGG
CGGCCGGCGCCGCGGGGACGGTTGGGAAAATGTTCACGCTTAAATTCACC
GTCGCCGAGGCCTTGGGCCATGCGTTGGCCGCCCCCAGTGATGgtatgtg
aactggatctgttaaactcaacgattcctctctggaaatgatccctcgcg
catctagttcttcggggggatgggaggtaggaggggagaaagctaagacc
gagacacatcaatcaactggaccgtatcaccaagcacttacatttttcgc
tcacttaatgccataatcatccatccttattcttcagAGGAAAATCCGGC
AATAACCTTCAAAGACCATGGCCTGCACACAGTGCTCCTTTTCTCGCCCA
CGGCCCCCTCCCTCGCCATCCGCGGTCTCACGAAAGCTGACATTCCAACC
CTGGTCAAGCTCCTCGTCACTAAGGAGAACTACTCAGCCGCCCTTCCTTC
AGCCCTTCCTTCGCAGGTCATTATCCAACCTCTACCCGGCAAGGATCTAT
TTGTTTGCGCGCATGCCTCGCGGGACATTCGGTGCAAGACCTGTGGGCCA
CGGCTGGTGGGGTGGTTGAAAGAAGAGGCTATCAAAGCGGCGAAATCGGG
GTCTGGAGAAGACGAAGTAAGGATCTGGCCATCGTCGCATGTGGGAGGAC
ACATGCACGCGGGAAATGTCTTGGTTTTCCCCAGCGGGGATTGGTATGGC
CAGGTGAATGACCCTGCAAAGGCCCAGTTGGTGCTGGAGAAGAAGGGCGT
GGAGGACGACCTGAAAAAGTTGTGGCGGGGTCGCATAGGACTGAATCAAA
TGCAGCAGGACGAGCTTGTGTCTGAAGGCAATTAAAAAAGAATGGACATG
TGATGAAAGAAAGCAAGAGAACCAAATGGGTGGCGCCACTCGAGGTCCGG
GAAATAG
back to top

protein sequence of NO05G05040.1

>NO05G05040.1-protein ID=NO05G05040.1-protein|Name=NO05G05040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=334bp
MLSATYCCCVMLTISVAARASLSTNTMRRTLLLRPSSLATAAFTTTTTTT
TTNPTIRRRRLLRRRAVNPEATMAGTVKLYDRHVFVLDPVRGHELWPTHV
EESSFLLIADYKKAQKALTAAAGAAGTVGKMFTLKFTVAEALGHALAAPS
DEENPAITFKDHGLHTVLLFSPTAPSLAIRGLTKADIPTLVKLLVTKENY
SAALPSALPSQVIIQPLPGKDLFVCAHASRDIRCKTCGPRLVGWLKEEAI
KAAKSGSGEDEVRIWPSSHVGGHMHAGNVLVFPSGDWYGQVNDPAKAQLV
LEKKGVEDDLKKLWRGRIGLNQMQQDELVSEGN*
back to top
Synonyms
Publications