NO05G04600, NO05G04600 (gene) Nannochloropsis oceanica

Overview
NameNO05G04600
Unique NameNO05G04600
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4173
Alignment locationchr5:1198193..1202365 +

Link to JBrowse

Properties
Property NameValue
DescriptionRieske (2fe-2s) domain protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:1198193..1202365 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:00515372 iron, 2 sulfur cluster binding
GO:0016491oxidoreductase activity
GO:00515372 iron, 2 sulfur cluster binding
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0055114oxidation-reduction process
Vocabulary: INTERPRO
TermDefinition
IPR036922Rieske_2Fe-2S_sf
IPR017941Rieske_2Fe-2S
IPR006843PAP/fibrillin_dom
Homology
BLAST of NO05G04600 vs. NCBI_GenBank
Match: EWM28030.1 (rieske (2fe-2s) domain protein [Nannochloropsis gaditana])

HSP 1 Score: 1114.4 bits (2881), Expect = 0.000e+0
Identity = 589/837 (70.37%), Postives = 642/837 (76.70%), Query Frame = 0
Query:  135 TSNLSSLSDEISSKFQSLFGTMASF-----IGQDAAAXXXXXXXXXXXXXXXXXXXXXXXXXPGSPSTTTISFLEPRTPAELAAATLANPCDSALPTFTSTPPSTTSRRPPSLSATDAALGKVPDPVNENIARISSKVPNTWLAVCHSADLKKKELKKVWVDEKPICLFRTSSGEVKAISDICLHRAAALSDGWLDGDLVVCPYHAYKFDGEGKLRYIPGVDEGMLAKNKRTARTVWYKTYEQGGLVYIFPDAMRAGAIEQHVKPFLIPEAEDPSFRVVEGVCEIKASANLVVENLLDMLHISYVHSFGNMQEPLPFEENYEYFFDDEASQLLPYARTTFKYRAGPTSISKVVGKIQEVVVENEFHLPYTTVTRVKFGQDVKTIYVVAVPVEDGLTVVHYKLYRNFMYVHPRDESIVNKGLDQFFQSVMRLTLNEDKDILESLYQEHQEGYVLSRYDKPLKIFRKTMKEFMEASRAREGMAERRALEMELLRLIERTERGRRATRGQHATILSIVKGLEKGFARQFEREEGNMGEVVIEDSAVNGTWHLVYANPGDLSALPPASEEEEMGRQQWQKGRKRVLRPVPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPSXXXXXXXXXXXXXXXXXXXRSPREAEDVLLYSEEGSARLQERLRSAGGERYLLDFTPSKGRPLWADTDESTQTIDTANNLLSNTAVYQGLLGITTKVELNGVLSTPGIG---KGGREGKERDGAGKGHRQDVQFTSAKVDVGGFQVMFPHMDVFGISGWLDTTFVDEHIRICRGNRGSVFVLTRRPLVAPGKVGKEEI 964
            +S+  SL DEI +KF+SLF  +AS         + A                           GSPSTTT+SF +    A++AAA L +PCDSALP                    D ALGKVP+PVNENIARISSKVPNTWLAVCHS+ LKKKELKK+WVD+KPICLFR +SGEVKAISDICLHRAAALSDGWLDGDLVVCPYHAYKFDGEGKLRYIPGVDEGMLAKNKRTARTVWYKT EQGGL+Y+FPDAMRAGAIEQHVKPFLIPE  DPSFRVVEGV EIKASANLVVENLLDMLHISYVHSFGNMQEPLPF ENY+YFFDDEASQLLPYARTTFKYRAGPTSISKVVG+++EVVVENEFHLPYTTVTRVKFG+DVKTIYVVAVPVEDGLTVVHYKLYRNFMYVHP+DES VNKGLD FFQSVMRLTLNEDK+ILESLYQEHQ GYVLSRYDKPLKI+RK +KEFMEAS++RE +AERRALEMELLRLIE TERGR+ATRGQH+ ILSIV+GLE+GFARQF+ EEG  GEVVIEDSAVNGTWHLVYANPGDL++LPP  E++E   ++ +  R + LRP  D                                                                       RSPRE +DVLLYSEE SARLQERLRSAGGERYLLDFTPSKGRPLW DTDESTQTIDT+ NLLSNTAVYQGLLGITTKVELNG++STP  G   KG   G +  G  KGHRQDVQFTSAKVDVGGF+V FPHMDVFG++GWLDTTFVDEHIRICRGNRGS+FVLTRRPL     VGK E+
Sbjct:  152 SSSTPSLHDEILTKFKSLFEGIASIDTHAESTHEEAVATLAATALAKTKGGAGGRGGSSLVTLGSPSTTTVSFPDQSRAADVAAAALQSPCDSALPAVVPKSXXXXXXXXXXXXXXDVALGKVPEPVNENIARISSKVPNTWLAVCHSSSLKKKELKKIWVDDKPICLFRAASGEVKAISDICLHRAAALSDGWLDGDLVVCPYHAYKFDGEGKLRYIPGVDEGMLAKNKRTARTVWYKTLEQGGLIYLFPDAMRAGAIEQHVKPFLIPEEVDPSFRVVEGVAEIKASANLVVENLLDMLHISYVHSFGNMQEPLPFSENYDYFFDDEASQLLPYARTTFKYRAGPTSISKVVGQVKEVVVENEFHLPYTTVTRVKFGKDVKTIYVVAVPVEDGLTVVHYKLYRNFMYVHPQDESPVNKGLDHFFQSVMRLTLNEDKEILESLYQEHQAGYVLSRYDKPLKIYRKALKEFMEASKSREFLAERRALEMELLRLIECTERGRKATRGQHSMILSIVQGLERGFARQFKDEEGGNGEVVIEDSAVNGTWHLVYANPGDLASLPPDDEQKE---EEQRSLRMQDLRPALDATATAAAGPYPWRTMTPRQQQRMTREARERMQQA----------------EEKGGSAHSLPAAEPASKPLPRSPRETDDVLLYSEEKSARLQERLRSAGGERYLLDFTPSKGRPLWVDTDESTQTIDTSKNLLSNTAVYQGLLGITTKVELNGIISTPAGGQKNKGDALGVKDGGRNKGHRQDVQFTSAKVDVGGFKVTFPHMDVFGVNGWLDTTFVDEHIRICRGNRGSIFVLTRRPLTV-AAVGKGEV 968          
BLAST of NO05G04600 vs. NCBI_GenBank
Match: XP_005855718.1 (rieske (2fe-2s) domain protein [Nannochloropsis gaditana CCMP526] >EKU20640.1 rieske (2fe-2s) domain protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1112.1 bits (2875), Expect = 0.000e+0
Identity = 588/837 (70.25%), Postives = 641/837 (76.58%), Query Frame = 0
Query:  135 TSNLSSLSDEISSKFQSLFGTMASF-----IGQDAAAXXXXXXXXXXXXXXXXXXXXXXXXXPGSPSTTTISFLEPRTPAELAAATLANPCDSALPTFTSTPPSTTSRRPPSLSATDAALGKVPDPVNENIARISSKVPNTWLAVCHSADLKKKELKKVWVDEKPICLFRTSSGEVKAISDICLHRAAALSDGWLDGDLVVCPYHAYKFDGEGKLRYIPGVDEGMLAKNKRTARTVWYKTYEQGGLVYIFPDAMRAGAIEQHVKPFLIPEAEDPSFRVVEGVCEIKASANLVVENLLDMLHISYVHSFGNMQEPLPFEENYEYFFDDEASQLLPYARTTFKYRAGPTSISKVVGKIQEVVVENEFHLPYTTVTRVKFGQDVKTIYVVAVPVEDGLTVVHYKLYRNFMYVHPRDESIVNKGLDQFFQSVMRLTLNEDKDILESLYQEHQEGYVLSRYDKPLKIFRKTMKEFMEASRAREGMAERRALEMELLRLIERTERGRRATRGQHATILSIVKGLEKGFARQFEREEGNMGEVVIEDSAVNGTWHLVYANPGDLSALPPASEEEEMGRQQWQKGRKRVLRPVPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPSXXXXXXXXXXXXXXXXXXXRSPREAEDVLLYSEEGSARLQERLRSAGGERYLLDFTPSKGRPLWADTDESTQTIDTANNLLSNTAVYQGLLGITTKVELNGVLSTPGIG---KGGREGKERDGAGKGHRQDVQFTSAKVDVGGFQVMFPHMDVFGISGWLDTTFVDEHIRICRGNRGSVFVLTRRPLVAPGKVGKEEI 964
            +S+  SL DEI +KF+SLF  +AS         + A                           GSPSTTT+SF +    A++AA  L +PCDSALP                    D ALGKVP+PVNENIARISSKVPNTWLAVCHS+ LKKKELKK+WVD+KPICLFR +SGEVKAISDICLHRAAALSDGWLDGDLVVCPYHAYKFDGEGKLRYIPGVDEGMLAKNKRTARTVWYKT EQGGL+Y+FPDAMRAGAIEQHVKPFLIPE  DPSFRVVEGV EIKASANLVVENLLDMLHISYVHSFGNMQEPLPF ENY+YFFDDEASQLLPYARTTFKYRAGPTSISKVVG+++EVVVENEFHLPYTTVTRVKFG+DVKTIYVVAVPVEDGLTVVHYKLYRNFMYVHP+DES VNKGLD FFQSVMRLTLNEDK+ILESLYQEHQ GYVLSRYDKPLKI+RK +KEFMEAS++RE +AERRALEMELLRLIE TERGR+ATRGQH+ ILSIV+GLE+GFARQF+ EEG  GEVVIEDSAVNGTWHLVYANPGDL++LPP  E++E   ++ +  R + LRP  D                                                                       RSPRE +DVLLYSEE SARLQERLRSAGGERYLLDFTPSKGRPLW DT+ESTQTIDT+ NLLSNTAVYQGLLGITTKVELNG++STP  G   KG   G E  G  KGHRQDVQFTSAKVDVGGF+V FPHMDVFG++GWLDTTFVDEHIRICRGNRGS+FVLTRRPL     VGK E+
Sbjct:  129 SSSTPSLHDEILTKFKSLFEGIASIDTHADSTHEEAIATLAATALAKTKGGAGGRGGSSLVTLGSPSTTTVSFPDQSRAADVAATALQSPCDSALPAAVPKSXXXXXXXXXXXXXXDVALGKVPEPVNENIARISSKVPNTWLAVCHSSSLKKKELKKIWVDDKPICLFRAASGEVKAISDICLHRAAALSDGWLDGDLVVCPYHAYKFDGEGKLRYIPGVDEGMLAKNKRTARTVWYKTLEQGGLIYLFPDAMRAGAIEQHVKPFLIPEEVDPSFRVVEGVAEIKASANLVVENLLDMLHISYVHSFGNMQEPLPFSENYDYFFDDEASQLLPYARTTFKYRAGPTSISKVVGQVKEVVVENEFHLPYTTVTRVKFGKDVKTIYVVAVPVEDGLTVVHYKLYRNFMYVHPQDESPVNKGLDHFFQSVMRLTLNEDKEILESLYQEHQAGYVLSRYDKPLKIYRKALKEFMEASKSREFLAERRALEMELLRLIECTERGRKATRGQHSMILSIVQGLERGFARQFKDEEGGNGEVVIEDSAVNGTWHLVYANPGDLASLPPDDEQKE---EEQRSLRMQDLRPALDATATAAAGPYPWRTMTPRQQQRMTREARERMQQA----------------EEKGGSAHSLPAAEPASKPLPRSPRETDDVLLYSEEKSARLQERLRSAGGERYLLDFTPSKGRPLWVDTEESTQTIDTSKNLLSNTAVYQGLLGITTKVELNGIISTPAGGQKNKGDALGVEDGGRNKGHRQDVQFTSAKVDVGGFKVTFPHMDVFGVNGWLDTTFVDEHIRICRGNRGSIFVLTRRPLTV-AAVGKGEV 945          
BLAST of NO05G04600 vs. NCBI_GenBank
Match: CBN75826.1 (Rieske (2Fe-2S) domain protein [Ectocarpus siliculosus])

HSP 1 Score: 228.4 bits (581), Expect = 9.400e-56
Identity = 193/716 (26.96%), Postives = 266/716 (37.15%), Query Frame = 0
Query:  265 SKVPNTWLAVCHSADLKKKELKKVWVDEKPICLFRTSSGEVKAISDICLHRAAALSDGWLDGDLVVCPYHAYKFDGEGKLRYIPGVDEGMLAKNKRTARTVWYKTYEQGGLVYIFPDAMRAGAIEQHVKPFLIPEAEDPSFRVVEGVCEIKASANLVVENLLDMLHISYVHSFGNMQEPLPFEENYEYFFDDEASQLLPYARTTFKYRAGPTSISKVVGKIQEVVVENEFHLPYTTVTRVKFGQD-VKTIYVVAVPVEDGLTVVHYKLYRNFMYVHPRDESIVNKGLDQFFQSVMRLTLNEDKDILESLYQEHQEGYVLSRYDKPLKIFRKTMKEFMEASRAREGMAERRALEMELLRLIERTERGRRATRGQHATILSIVKGLEKGFARQFEREEGNMGEVVIED--------------------------SAVNGTWHLVY-ANPGDLSALPPASEEEEMGRQQWQKGRKRVLRPVPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPSXXXXXXXXXXXXXXXXXXXRSPREAEDVLLYSEEGSARLQERLRSAGGERYLLDFTPSKGRPLWADTDESTQTIDTANNLLSNTAVYQGLLGITTKVELNGVLSTPGIGKGGREGKERDGAGKGHRQDVQFTSAKVDVGGFQVMFPHMDVFGISGWLDTTFVDEHIRICRGNRGSVFVLTRRPL 953
            ++VPN WLAV HS+D+K  E+KKV VD  PI L+RTS+G V A SD+C+HR A+L+ GW+  D +VCP                                                                                                                                                          +VVV+NEFHLPY  V RV FG + +KTI   AVP  DG T +H+KLYRNF   HP DE  +NK  D  F  +M LTL EDK+I+E++Y E+Q G++ +RYD+ +  +RK +  F   +  R       +L+MELL  I R+ERG  +TRG  + IL +++ LE   A                                            +V G WHL + +N G           EE  ++ W                                                                                      P + E + +            L+ AG E  L D+  + GRPLWADT ES Q IDT    L+N AVY+G  G TT V+L+ V+              +D A    R  V F  A V+VGG +V FPH+  F  +GW++TT++++ IRI RGN+GS+FVLTR+P+
Sbjct:  172 TRVPNLWLAVAHSSDVKAGEVKKVEVDGVPIALWRTSTGSVSAQSDVCIHRGASLARGWIANDRLVCP---------------------------------------------------------------------------------------------------------------------------------------------------------SQVVVKNEFHLPYRAVIRVYFGSNSLKTIEATAVPRADGETTLHWKLYRNFAITHPLDEGPINKAGDFLFGQMMDLTLKEDKEIIENIYPEYQRGFMNARYDQQMLQYRKAITNFQATAAERANTQLETSLQMELLNRISRSERGLASTRGDRSAILDLIRRLEDVQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNALRESVEGEWHLEFVSNDGG----------EEGAQEGWDLASS-------------------------------------------------------------------------------TDPEKKERLAV------------LKEAGSEALLFDWKET-GRPLWADTSESVQIIDTKARTLTNRAVYKGWSGFTTTVQLDAVIE-----------PLKDEAS---RLMVGFRKAIVNVGGMKVTFPHLQRFSPTGWMETTYLNQGIRIARGNKGSIFVLTRQPV 618          
BLAST of NO05G04600 vs. NCBI_GenBank
Match: XP_011399380.1 (Vanillate O-demethylase oxygenase subunit [Auxenochlorella protothecoides] >KFM26448.1 Vanillate O-demethylase oxygenase subunit [Auxenochlorella protothecoides])

HSP 1 Score: 141.7 bits (356), Expect = 1.200e-29
Identity = 128/431 (29.70%), Postives = 194/431 (45.01%), Query Frame = 0
Query:  193 GSPSTTTI---SFLEPRTPAELAAATLANPCDSALPTFTSTPPSTTSRRPPSLSATDAALGKVPDPVNENIARISSK----------VPNTWLAVCHSADLKKKELKKVWVDEKPICLFR-TSSGEVKAISDICLHRAAALSDGWL----DGDLVVCPYHAYKFDGEGKLRYIP-GVDEGMLAKNKRTARTVWYKTYEQGGLVYIFPDAMRAGAIEQHVKPFLIPEAEDPSFRVVEGVCEIKASANLVVENLLDMLHISYVH--SFGNMQEPLPFEENYEYFFDDEASQLLPYARTTFKYRAGPTSISKVVGKIQEVVVENEFHLPYTTVTRVKFGQDVK-TIYVVAVPVEDGLTVVHYKLYRNFMYVHPRDESIVNKGLDQFFQSVMRLTLNEDKDILESLYQEHQEGYVLSRYDKPLKIFRKTMKEFME 602
            G+ ST T+   + +EP T  +LA +TL  P             ++  R PP   AT   L + P    E  A ++ +          + N W AV  SA++  KE  KV +  + + LFR  +SG+V+A+ ++C HR A LS GWL     G  VVCPYH +  DG G L+ +P  +++G     KR+   V Y   E+GG V++F  + R    E+   P+ IPE +D  +R V    E + +   V EN +DM HI Y+H  SFGN   P           D + +        TF     P +    + ++ EV V     LP T+V     G  +  T +V  VP+    +V  + L R       R      +  D   +  MR  L+EDK ++E L  +        R D P   FRK  +++++
Sbjct:  134 GTKSTATVDAEAMVEPAT--KLATSTLVEPMPRGGTVVRPQGENSVVRAPPRKPATSVPLPRAPSSAEEMAAGVAKRARELRDRSGYLKNMWYAVALSANVGSKEPVKVQLCGREMVLFRDATSGDVQALDNVCPHRGAPLSSGWLSEKESGTCVVCPYHGWALDGAGALKDVPAAMNKGEWP--KRSLMNV-YDVEEKGGFVWLFYGSRRMPVNERPPIPY-IPELDDGGWRAVYEEMEFECNHFGVFENAIDMAHIHYLHGDSFGNADAP--------EIKDMQVASDAYGITATFTITNKPVNAFWSMFQVPEVFVTARVFLPSTSVVTFTLGAGLSFTTFVNTVPLTATRSVNRFALIRRL--ASDRTGLFNARIWDGMARDAMRKILSEDKAMVEQLRYDLLPAEYSVRADLPQVAFRKLRQQYVD 548          
BLAST of NO05G04600 vs. NCBI_GenBank
Match: XP_013903980.1 (hypothetical protein MNEG_2999 [Monoraphidium neglectum] >KIZ04961.1 hypothetical protein MNEG_2999 [Monoraphidium neglectum])

HSP 1 Score: 121.3 bits (303), Expect = 1.600e-23
Identity = 126/433 (29.10%), Postives = 178/433 (41.11%), Query Frame = 0
Query:  195 PSTTTISFLEPRTPAELAAATLANPCDSALPTFTSTPPSTTSRRPPSLSATDAALGKVPDPVNENIARISSKVPNTWLAVCHSADLKKKELKKVWVDEKPICLFR-TSSGEVKAISDICLHRAAALSDGWLDGD------LVVCPYHAYKFDGEGKLRYIPGVDEGMLAKNKRTARTVWYKTYEQGGLVYIFPDAMRAGAIEQHVKP----FLIPEAEDPSFRVVEGVCEIKASANLVVENLLDMLHISYVH--SFGNMQEPLPFEENYEYFFDDEASQLLPY-ARTTFKYRAGP-TSISKVVGKIQEVVVENEFHLPYTTVTRVKFGQDVKTI-YVVAVPVEDGLTVVHYKLYRNFMYVHPRDESIVNKGLDQFFQSVMRLTLNEDKDILESLYQEHQEGYVLSRYDKPLKIFRKTMKEFMEAS-RAREGMA 611
            P+T   +   PR+PA LA    A                    +P  L     A G +     E I R  S + N W A   S+DL       V +    I LFR   +GEV  + D C HR A LS G +  D       VVCPYH + FD EG+LR +P  + G   K    +    Y   EQGG V++F      G + + ++P      +PE  DP +  V G  E       V EN +DM HI Y+H  SFGN  +P              A++  PY   + F+    P   + +       V V  +  LP T+   +     V  I +V  VP+ +  ++  + L RNFM           +G D + ++ M   L EDK ++E L+ E  E       D P   FRK   E+M     +R G+A
Sbjct:  272 PATKAKAQPTPRSPAALAERRRA-----------------AGLKPGQLDPAVLAPGGLSRREKELIDR-KSYLKNFWYAAAISSDLGDDTPLGVDILGGRITLFRDQETGEVLCVDDWCPHRGAPLSGGKVKQDPSTGHTCVVCPYHGWAFDAEGRLRDVPSAEPGRWPKRPLLSS---YPVVEQGGFVWLF-----FGDLPEDLRPPIPGSFVPELNDPKWHAVYGEIEFDCGHWGVFENAIDMAHIHYLHSDSFGNSSQP--------RIHGMTATRPSPYNVESQFRIHNKPMNKLWEWTNTGDSVPVTAKAMLPSTSAVTIDLAHGVSMITFVNTVPISENKSINRFALIRNFMGW---------EGFDDYARNQMFKILGEDKVMVEKLHPEALEHEYSLSPDGPQVAFRKLRDEWMRLGYGSRHGIA 661          
BLAST of NO05G04600 vs. NCBI_GenBank
Match: WP_104900281.1 (aromatic ring-hydroxylating dioxygenase subunit alpha [Nostoc sp. 'Peltigera membranacea cyanobiont N6'] >AVH65205.1 Rieske (2Fe-2S) domain-containing ring-hydroxylating dioxygenase [Nostoc sp. 'Peltigera membranacea cyanobiont N6'])

HSP 1 Score: 119.0 bits (297), Expect = 8.000e-23
Identity = 97/311 (31.19%), Postives = 143/311 (45.98%), Query Frame = 0
Query:  269 NTWLAVCHSADLKKKELKKVWVDEKPICLFRTSSGEVKAISDICLHRAAALSDGWLDGDLVVCPYHAYKFDGEGKLRYIPGVDEGM-LAKNKRTARTVWYKTYEQGGLVYIFPDAMRAGAIEQHVKPFL--IPEAEDPSFRVVEGVCEIKASANLVVENLLDMLHISYVH--SFGNMQEPLPFEENYEYFFDDEASQLLPYARTTFKYRAGPTSISKVVGKIQ-EVVVENEFHLPYTTVTRVKFGQDVKTIYVVAVPVEDGLTVVHYKLYRNFMYVHPRDESIVNKGLDQFFQSVMRLTLNEDKDILESLY 574
            N W A   SA + KK  K+V +  +    +R + G++ A+ D C HR AALS GW+  D + CPYHA+KF  +GK   IP    G+ + KN   AR   Y   E+ G ++IF      G + +  +P +  +PE EDPS + +    E+ A     +EN +DM H+S +H  SFGN        E+YE    D         R    Y       + V   ++  V V   F++P  T   V FG+     + V VPV+D  T+     +R+F         +     D  FQ      + EDK ++ES Y
Sbjct:    4 NFWYACEFSAAVTKKP-KQVRIFNQKFVFYRNAKGQLIALQDRCPHRGAALSLGWVKDDCIHCPYHAWKFQADGKCINIPANQPGIPIPKN---ARVDSYPVQEKYGFIWIF-----YGDLPEEERPPIPPLPEFEDPSLQKIFFEYELNAHYTRTLENDMDMSHVSIIHSKSFGNGFALEQKMEDYELNVGDWEGHAKVNVR---DYTKAKDLFAFVFRPLKANVKVTLGFYMPNITRLVVDFGRGKLVNFTVHVPVDDRTTITKRIQFRSF---------LTFPWADGIFQRAAYKVVMEDKGVVESEY 293          
BLAST of NO05G04600 vs. NCBI_GenBank
Match: WP_069069099.1 (aromatic ring-hydroxylating dioxygenase subunit alpha [Nostoc sp. KVJ20] >ODG98895.1 (2Fe-2S)-binding protein [Nostoc sp. KVJ20])

HSP 1 Score: 115.5 bits (288), Expect = 8.900e-22
Identity = 93/318 (29.25%), Postives = 145/318 (45.60%), Query Frame = 0
Query:  269 NTWLAVCHSADLKKKELKKVWVDEKPICLFRTSSGEVKAISDICLHRAAALSDGWLDGDLVVCPYHAYKFDGEGKLRYIPGVDEGM-LAKNKRTARTVWYKTYEQGGLVYIFPDAMRAGAIEQHVKPFL--IPEAEDPSFRVVEGVCEIKASANLVVENLLDMLHISYVH--SFGN----MQEPLPFEENYEYFFDDEASQLLPYART----TFKYRAGPTSISKVVGKIQEVVVENEFHLPYTTVTRVKFGQDVKTIYVVAVPVEDGLTVVHYKLYRNFMYVHPRDESIVNKGLDQFFQSVMRLTLNEDKDILESLY 574
            N W A   SA +  K  K+V +  + +  +R   G++ A+ D C HR AALS GW+  D + CPYHA+KF  +GK   IP    G+ + KN   AR   Y   E+ G +++F      G + +  +P +  +PE EDPS + +    E+ A     +EN +DM H+S +H  SFGN     Q+   +E N   +       +  Y +      F +R    ++   +G          F++P  T   V FG+     + V VPV+D  T+     +R+F         +     D  FQ      + EDK ++ES Y
Sbjct:    4 NFWYACEFSAAVTNKP-KQVRILNQKLVFYRNGKGQLIALQDRCPHRGAALSLGWVKDDCIHCPYHAWKFQADGKCIKIPANQPGIPIPKN---ARVDSYPIQEKYGFIWLF-----YGDLPEEERPPIPPLPEFEDPSLQKIFFEYELNAHYTRTLENDMDMSHVSIIHSKSFGNGFALEQKMEDYELNVGEWEGHAKVDVRDYTKAKDLFAFVFRPLKANVKVTLG----------FYMPNITRLVVDFGRGKLVNFTVHVPVDDRTTITKRIQFRSF---------LTFPWADGIFQRAAYKVVMEDKGVVESEY 293          
BLAST of NO05G04600 vs. NCBI_GenBank
Match: WP_029924788.1 (aromatic ring-hydroxylating dioxygenase subunit alpha [Nocardia otitidiscaviarum])

HSP 1 Score: 113.6 bits (283), Expect = 3.400e-21
Identity = 88/276 (31.88%), Postives = 132/276 (47.83%), Query Frame = 0
Query:  269 NTWLAVCHSADLKKKELKKVWVDEKPICLFRTSSGEVKAISDICLHRAAALSDGWLDGDLVVCPYHAYKFDGEGKLRYIPGVDEGMLAKNKRTARTVWYKTYEQGGLVYIFPDAMRAGAIEQHVKPFL--IPEAEDPSFRVVEGVCEIKASANLVVENLLDMLHISYVH--SFGNMQEP-LP----FEENYEYFFDDEASQLLPYARTTFKYRAGPTSISKVVGKIQEVVVENEFHLPYTTVTRVKFGQDVKTIYVVAVPVEDGLTVVHYKLYRNF 536
            N W A+   AD   ++ +KV    +   LFRT SG V  +SD+C+HR  ALS G +  D + CPYH ++++ EG    IP   E    K  R AR   Y T E+ G+V+ F      G + +  +P +  IPE +DP FRVV+   EI A+    +EN++D  H  +VH  SFGN  +P +P     + ++    D + S  LP        R  P        + + V V N ++LP      ++       +Y   +P+    T+V    YRNF
Sbjct:    4 NFWYAL-EFADRIGRQPRKVTCLGQDFVLFRTRSGTVTCLSDLCVHRGGALSMGTVTDDCIACPYHGWQYNSEGVCVKIPANAEE--RKIPRKARIDAYPTVERYGMVWAF-----LGDLPEAERPPIPVIPEHDDPEFRVVQFEMEIDANYERALENVVDAAHTPFVHGTSFGNPDKPEIPDFRIRQTDWSAEADIQLSPPLPTGLWGLLARRRP--------RPESVTVTNAWYLPNIVKLHIRLPIGDMLLYDFNIPLSQERTLVKILGYRNF 263          
BLAST of NO05G04600 vs. NCBI_GenBank
Match: WP_031458625.1 (aromatic ring-hydroxylating dioxygenase subunit alpha [Chloroflexus sp. MS-G])

HSP 1 Score: 113.6 bits (283), Expect = 3.400e-21
Identity = 95/362 (26.24%), Postives = 161/362 (44.48%), Query Frame = 0
Query:  269 NTWLAVCHSADLKKKELKKVWVDEKPICLFRTSSGEVKAISDICLHRAAALSDGWLDGDLVVCPYHAYKFDGEGKLRYIPGVDEGMLAKNKRTARTVWYKTYEQGGLVYIFPDAMRAGAIEQHVKPFL--IPEAEDPSFRVVEGVCEIKASANLVVENLLDMLHISYVH--SFGNMQEP-LPFEENYEYFFDDEAS-QLLPYART-----TFKYRAGPTSISKVVGKIQEVVVENEFHLPYTTVTRVKFGQDVKTIYVVAVPVEDGLTVVHYKLYRNFMYVHPRDESIVNKGLDQFFQSV--------------MRLTLNEDKDILESLYQEHQEGYVLSRYDKPLKIFRKTMKEFMEASRA 606
            N W  +  S  +K K + +V   E+   ++RTS G+   +SD+C+HR  ALSDGW+ GD +VCPYH +++  +G    IP   + +  K    AR   Y T E+ G ++ F      G + +  +P L  +P  +DP F+V+ G  E        +EN LD+ H  +VH  +FGN +EP +P  E   + +  EA+  L P  R       F Y+     +    G          F +P  T+  V     +  ++   +PV++  T+  +   R F   +  D   + + L  F Q                +   L+   D+++  Y+  ++ Y+    DK  +I  + +K+     RA
Sbjct:    4 NFWWPLEFSHVVKDKPV-RVTALEQEFVIYRTSDGKAHVLSDLCVHRGGALSDGWISGDCIVCPYHGWEYKADGACAKIPAHPDLVPPKK---ARVDAYPTVERYGYIWAF-----LGDLPEAERPPLPELPHFDDPRFKVIRGKFEWPVYYERALENSLDIAHAPFVHGGAFGNREEPEVPDYEVILHPYGAEATVTLKPPKRNMKGLWNFLYKEDRPDVKTRTG----------FWMPCITLLEVNLPLGLMVLFNCHIPVDEYTTITKWTQMRTFFKGNWADGDALKRVLKIFNQDYPVVLAQRPELLPYDIGAELSVKSDVIQIAYRRMRQKYI----DKGWQIDVRRIKQEYGRQRA 342          
BLAST of NO05G04600 vs. NCBI_GenBank
Match: WP_094349644.1 (aromatic ring-hydroxylating dioxygenase subunit alpha [Nostoc sp. 'Peltigera membranacea cyanobiont' 210A] >OYD94561.1 (2Fe-2S)-binding protein [Nostoc sp. 'Peltigera membranacea cyanobiont' 210A])

HSP 1 Score: 113.6 bits (283), Expect = 3.400e-21
Identity = 91/318 (28.62%), Postives = 144/318 (45.28%), Query Frame = 0
Query:  269 NTWLAVCHSADLKKKELKKVWVDEKPICLFRTSSGEVKAISDICLHRAAALSDGWLDGDLVVCPYHAYKFDGEGKLRYIPGVDEGM-LAKNKRTARTVWYKTYEQGGLVYIFPDAMRAGAIEQHVKPFL--IPEAEDPSFRVVEGVCEIKASANLVVENLLDMLHISYVH--SFGN----MQEPLPFEENYEYFFDDEASQLLPYART----TFKYRAGPTSISKVVGKIQEVVVENEFHLPYTTVTRVKFGQDVKTIYVVAVPVEDGLTVVHYKLYRNFMYVHPRDESIVNKGLDQFFQSVMRLTLNEDKDILESLY 574
            N W A C  +     + K+V +  +    +R + G++ A+ D C HR AALS GW+  D + CPYHA+KF  +GK   IP    G+ + KN   AR   Y   E+ G +++F      G + +  +P +  +PE EDPS + +    E+ A     +EN +DM H+S +H  SFGN     Q+   +E N   +       +  Y +      F +R    ++   +G          F++P  T   V FG+     + V VPV+D  T+     +R+F         +     D  FQ      + EDK ++ES Y
Sbjct:    4 NFWYA-CEFSTAVTTKPKQVRILNQKFVFYRNAKGQLIALQDRCPHRGAALSLGWVKDDCIHCPYHAWKFQADGKCINIPANQPGIPIPKN---ARVDSYPIQEKYGFIWLF-----YGDLPEEERPPIPPLPEFEDPSLQKIFFEYELNAHYTRTLENDMDMSHVSIIHSKSFGNGFALEQKMEDYELNVGEWEGHAKVNVRDYTKAKDLFAFVFRPLKANVKVTLG----------FYMPNITRLVVDFGRGKLVNFTVHVPVDDRTTITKRIQFRSF---------LTFPWADGIFQRAAYKVVMEDKGVVESEY 293          
The following BLAST results are available for this feature:
BLAST of NO05G04600 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28030.10.000e+070.37rieske (2fe-2s) domain protein [Nannochloropsis ga... [more]
XP_005855718.10.000e+070.25rieske (2fe-2s) domain protein [Nannochloropsis ga... [more]
CBN75826.19.400e-5626.96Rieske (2Fe-2S) domain protein [Ectocarpus silicul... [more]
XP_011399380.11.200e-2929.70Vanillate O-demethylase oxygenase subunit [Auxenoc... [more]
XP_013903980.11.600e-2329.10hypothetical protein MNEG_2999 [Monoraphidium negl... [more]
WP_104900281.18.000e-2331.19aromatic ring-hydroxylating dioxygenase subunit al... [more]
WP_069069099.18.900e-2229.25aromatic ring-hydroxylating dioxygenase subunit al... [more]
WP_029924788.13.400e-2131.88aromatic ring-hydroxylating dioxygenase subunit al... [more]
WP_031458625.13.400e-2126.24aromatic ring-hydroxylating dioxygenase subunit al... [more]
WP_094349644.13.400e-2128.62aromatic ring-hydroxylating dioxygenase subunit al... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003396NSK003396Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G04600.1NO05G04600.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|565034gene_3276Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100008g117gene2622Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G04600.1NO05G04600.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G04600 ID=NO05G04600|Name=NO05G04600|organism=Nannochloropsis oceanica|type=gene|length=4173bp
ATGCCCTTTTCCCCGTCTTCTTCCTCATCCTCATCCTTCCTCGTCGTTGC
CGCCGCCAGTGCGGTTGCCGCCACTGCCCTGTGCGCCTCCTCTGCTTTGA
GCTGCAGTAGCGGCAGCAGCACCGTGCAGGCCTTCCTGATGCCCTCCCTC
ACCATCTCGTCAACAATCACGTCGCGCCATCGTCATCAACACCAGCGCAT
CCCTCTTCCTGCTATCACCATGAGAAGAAGAGACATCCCTTCTTCCTCCT
CCTCCTCCTCGCTACAAGCAATCAGCCCTTTCCAGGAGCACTATCAAGGC
AACGAAAATAAAAACAATAACGACGATGAAGACGAGGATGAAGCCAAGGC
TGCTCTGACCCACGGCAGCAAAACGGCCACGGGTAAAGGCAGCAGCAGCC
GTACCAGTAACCTATCTTCCCTCAGCGACGAAATAAGCAGCAAGTTCCAA
TCCCTATTTGGTACTATGGCGAGCTTCATCGGACAGGACGCCGCTGCTGC
TACTGTTTCCGCTGCTGCTCTCGCCAAGACCAAGGGTGGGGCCGGTGGCC
GTGGACGCAGCGCCACCATCACGCCTGGCAGCCCTTCTACCACCACAATC
TCCTTCCTCGAGCCCCGCACCCCCGCGGAGCTTGCCGCTGCTACCCTCGC
AAATCCGTGCGATAGTGCCTTGCCTACCTTTACTTCTACCCCTCCTTCCA
CCACCTCCCGGCGTCCTCCCTCCCTCTCGGCGACAGACGCTGCGCTAGGC
AAGGTCCCCGATCCTGTTAATGAAAATATTGCAAGGATTTCGAGCAAAGT
GCCAAACACCTGGCTGGCTGTCTGTCATTCCGCAGATCTGAAGAAGAAGG
AGCTGAAAAAGGTGTGGGTGGACGAGAAACCCATCTGCTTGTTCCGGACC
TCGAGTGGGGAAGTGAAGGCCATCAGTGACATCTGCCTGCACCGGGCTGC
TGCCTTGTCGGATGGGTGGTTGGATGGTGACCTTGTAGTATGCCCTTACC
ACGCGTATAAATTTGACGGGGAGGGGAAGTTGAGATATATCCCCGGGGTA
GACGAGGGTATGCTGGCGAAGAATAAACGGACGGCGAGGACCGTATGGTA
TAAGACCTACGAGCAGGGGGGGTTGGTGTATATCTTCCCCGATGCCATGA
GGGCAGGGGCGATCGAGCAGCACGTGAAGCCTTTCCTCATACCCGAAGCA
GAGGATCCGTCGTTTCGGGTGGTGGAAGGCGTGTGTGAGATCAAGGCGAG
CGCGAATTTGGTGGTTGAGAACTTGCTTGATATGCTTCACATTTCTTACG
TACACTCGTTTGGTAACATGCAGGAACCGCTGCCATTTGAGGAGAATTAT
GAATACTTTTTTGACGACGAGGCGTCCCAATTGCTGCCATACGCGAGGAC
GACCTTCAAATACCGGGCAGGGCCAACGAGCATCAGTAAAGTGGTGGGGA
AAATTCAGGAGGTGGTGGTGGAGAATGAGTTCCACTTGCCCTACACCACC
GTGACGCGCGTCAAGTTCGGCCAGGACGTCAAGACGATCTACGTGGTGGC
TGTGCCTGTTGAGGACGGGTTGACGGTAGTCCACTACAAGCTGTATCGAA
ATTTCATGTATGTTCACCCAAGGGACGAGTCAATTGTGAATAAAGGCCTG
GATCAGTTTTTCCAGTCTGTCATGCGCTTGACCCTGAATGAGGATAAGGA
TATATTGGAGTCGTTGTACCAGGAGCACCAGGAGGGTTATGTCCTGAGTA
GATATGATAAGCCCTTGAAGATTTTTAGGAAGACGATGAAGGAGTTTATG
GAGGCGAGCAGGGCGAGGGAGGGTATGGCGGAAAGGCGGGCATTGGAGAT
GGAGTTGTTAAGATTGATAGAACGGACGGAGAGGGGGAGGAGGGCCACCC
GGGGTCAGCATGCAACGATTTTGTCGATTGTCAAGGGGTTGGAGAAGGGC
TTTGCACGCCAGTTTGAGAGGGAGGAAGGGAACATGGGCGAGGTCGTGAT
TGAGGACAGTGCTGTAAACGGGACCTGGCATCTGGTCTATGCGAATCCGG
GTGACCTGTCTGCCCTTCCTCCCGCCTCCGAGGAGGAGGAAATGGGGAGG
CAGCAATGGCAGAAGGGCAGGAAGAGGGTGTTGCGGCCGGTGCCGGATGC
CACGGCTGCAGCTGCTGCTAGTGCTCGACGCCTTATGACCCCCGCGCAGC
AACAGGCAGCCTCCCGGCAACAGCGCAAGCAGCAGCAGCAGCAGCAGCAG
GTAGAGGAAGATGGATCTACCTCTCCTCCTTATTCGTCTCATCACTTTCC
TTCTCCTCCATCTCCTACCCCTGTCCCTGTTTCTACTGCTACAACTGCTG
CTGCTGCTCCTCGCTCTCCGCGTGAGGCTGAAGATGTCTTGTTATATTCC
GAAGAGGGATCTGCGCGGTTGCAGGAACGCCTGCGCTCAGCGGGTGGAGA
GAGATATTTGCTTGACTTTACCCCGAGTAAAGGCCGGCCATTGTGGGCGG
ATACGGACGAAAGCACGCAAACGATCGACACGGCTAACAATTTATTGAGC
AATACGGCGGTTTACCAAGGGCTGCTGGGTATCACGACGAAGGTGGAATT
GAACGGCGTGTTGTCCACACCGGGAATAGGAAAGGGAGGGAGGGAGGGGA
AGGAGAGAGATGGGGCAGGAAAAGGGCATAGACAGGATGTACAGTTTACG
TCGGCGAAGGTGGATGTCGGGGGTTTTCAGGTGATGTTCCCTCATATGGA
CGTATTTGGGATAAGTGGTTGGTTGGACACAACATTTGTGGATGAGCATA
TAAGGATTTGTCGGGGAAATCGCGGATCAGTTTTCGTGTTGACGCGTCGG
CCGTTGGTTGCTCCAGGCAAGGTGGGAAAGGAGGAGATTTAGGGAAGACG
ATTTTGTAATATTGTTTATTTTACCTCTGTTTTAACTCATTGTAGAATTG
ATTTCGGTGCTGTGTCCGTGCGTTTGTTCGCAATTGTATCTGCGGCTGGT
TATGCTGTTACTGCGGTAGTCGCGTGGTAATGTAATAAGTGGGAAAAGTG
GCCTACATGCTTGTGAAAATATTGATTTGGTTTGTGACTACTCTGTTGCA
GCTGCCTGCCGACGGATGTGGGGGCAGAGAGGAAGGGAGGGAGGTATGGA
GGGAGGGAAAGAGAGAGTGAAACATAGACCCATTTCCAGGAAAAGTTCAA
ACGATGACAATGATGGAGTCGAAAAGCACGCTGTTTGACAGAGCAGGGAG
AAAGGAGAAAGAGAAGAGGTGTGTACAAAGTTTGCGTCAAGACATGATGA
AAGGAGGGAAGGACAGCGGATGTTGATTAGAGCGGTGATGTGGCCCTGAG
AAACAAAGAGAGTAAATGAAGAGCCATCAGGGGTTAGATAATCATACACA
TTAGAACATTACAAATTGATTTGTGAATGGAAAGAGCGGAAGCTTAAGAG
AACAAGCAAGTAAGGAGGACGGAGAGAAGAGCGAAGGGTATACATAGAGA
TATATTTGTCATTTCCGTTTACGAGTGGTGAGGGTCGATCAAATTATGCT
TCCCTCCCCCTTTGTTTGTCTGTGTGTGTAATGTGAATGTGTGTGCAAAG
GAAACCCTTGCAGGCAACAAAGACAGGGAGAAGGCAGGACCGCCAGTGTT
TGATGACAATTGAGAAAGAAGCTTTCGACCTTGTATGTGCAGAGCTCTGA
TGTAGAAAACAGTCTTTGCGAGAGATGTGCTCATGTTTCTATACTCTATT
TAGCGGCGGCGGCAGCAGCAGTAGCAGCAGCAGCAGCGGCAAAGGGAGAG
AGTAAGAGGAGAAAGAGAGCGAGCATCAATCAATGGCCAAATATGTCTAA
CAATCCAGCATCGTTAATAATGAATATCATCAAGACATGGCTGGAGAGAG
GACAGCACCGAGAGGCAAAGAAAAAACGCTCGTCCAAGAGAAAGAGATAG
AAAGTGGAGGAATATGCACAGTCTGCGTAGATCAAGGATTAAGAGGGGTA
GAGGGCATTTCGGCCCCTTCGCCTACTTCTTCCACAACGCGTAACGTGAC
GCTTGAAGGTTGTTATTATTGTATCTTTATTTGTCCAGTCCAACTCCCTC
CCAAAGAGAAGAAAAAGAATAATAATAATGAAGACACAGGAAAAAAGAAG
TGAGACGAGAAGGATGCAAATAC
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protein sequence of NO05G04600.1

>NO05G04600.1-protein ID=NO05G04600.1-protein|Name=NO05G04600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=964bp
MPFSPSSSSSSSFLVVAAASAVAATALCASSALSCSSGSSTVQAFLMPSL
TISSTITSRHRHQHQRIPLPAITMRRRDIPSSSSSSSLQAISPFQEHYQG
NENKNNNDDEDEDEAKAALTHGSKTATGKGSSSRTSNLSSLSDEISSKFQ
SLFGTMASFIGQDAAAATVSAAALAKTKGGAGGRGRSATITPGSPSTTTI
SFLEPRTPAELAAATLANPCDSALPTFTSTPPSTTSRRPPSLSATDAALG
KVPDPVNENIARISSKVPNTWLAVCHSADLKKKELKKVWVDEKPICLFRT
SSGEVKAISDICLHRAAALSDGWLDGDLVVCPYHAYKFDGEGKLRYIPGV
DEGMLAKNKRTARTVWYKTYEQGGLVYIFPDAMRAGAIEQHVKPFLIPEA
EDPSFRVVEGVCEIKASANLVVENLLDMLHISYVHSFGNMQEPLPFEENY
EYFFDDEASQLLPYARTTFKYRAGPTSISKVVGKIQEVVVENEFHLPYTT
VTRVKFGQDVKTIYVVAVPVEDGLTVVHYKLYRNFMYVHPRDESIVNKGL
DQFFQSVMRLTLNEDKDILESLYQEHQEGYVLSRYDKPLKIFRKTMKEFM
EASRAREGMAERRALEMELLRLIERTERGRRATRGQHATILSIVKGLEKG
FARQFEREEGNMGEVVIEDSAVNGTWHLVYANPGDLSALPPASEEEEMGR
QQWQKGRKRVLRPVPDATAAAAASARRLMTPAQQQAASRQQRKQQQQQQQ
VEEDGSTSPPYSSHHFPSPPSPTPVPVSTATTAAAAPRSPREAEDVLLYS
EEGSARLQERLRSAGGERYLLDFTPSKGRPLWADTDESTQTIDTANNLLS
NTAVYQGLLGITTKVELNGVLSTPGIGKGGREGKERDGAGKGHRQDVQFT
SAKVDVGGFQVMFPHMDVFGISGWLDTTFVDEHIRICRGNRGSVFVLTRR
PLVAPGKVGKEEI*
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Synonyms
Publications