NO05G04500, NO05G04500 (gene) Nannochloropsis oceanica

Overview
NameNO05G04500
Unique NameNO05G04500
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3177
Alignment locationchr5:1167675..1170851 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:1167675..1170851 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0000776kinetochore
GO:0000776kinetochore
Vocabulary: Biological Process
TermDefinition
GO:0051382kinetochore assembly
GO:0051382kinetochore assembly
Vocabulary: Molecular Function
TermDefinition
GO:0019237centromeric DNA binding
GO:0019237centromeric DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR011051RmlC_Cupin
IPR028386CENP-C/Mif2/cnp3
Homology
BLAST of NO05G04500 vs. NCBI_GenBank
Match: EWM27956.1 (hypothetical protein Naga_100008g107 [Nannochloropsis gaditana])

HSP 1 Score: 546.2 bits (1406), Expect = 1.800e-151
Identity = 477/750 (63.60%), Postives = 513/750 (68.40%), Query Frame = 0
Query:    1 MASLEAMMPNQARQSTPGDKEKMVKYRASQAANASGIASKLKDIQGRRTGLVIHDRVSKDSEGFEDIDAFWELASTGADELSERGXXXXXXXXXXXXXXXXXXXXXXXXRYSRESNGLELGLDSTPGGGSTMGRRSSGVSSLGMPLSDDVSMAKRGGGRGMNRRSTLPAEAIAAARS-RRSSILSTTSSSLPASSTPLSLDGSLPARSDEEDGAERDDSTPASLPARATGAAATAAAVPRRRLDFLRNQKGSLGGSAAVLRPSGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQERFRRLRLSEYNREMGGKSLLQ---GEEGGEGGIGERRSTRRKVQPLQFWRNERVLYAVESTEGVDE--SRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAGKMSKRGKIVEGEERGREDGLGVMDPEKVYKKHPGHVYVKDGSGKGKVWDERKALRATRRVVIREEQVVMRPLENEEEEGVALEAGHAFRVLQVARSADDREAHEPSLLGYPGWVAGHMSLMPRKGKDPENVGPCSQVFHVLDCEKNSLELAVGELGEEA--FSEGMATRFLLGKGDTFYLPPMNVYRLFNHSKRGKARVFWTIVKPWS 743
            MASLEA+MP  A+     DKE++ KYRA QA N   +A  LKDIQGRRTGLVI +R+SKDSEGFEDIDAFWE+AS G DE S RG                        RYSR+S GL LGLDS PG     GRRSS  SSLG PLS+DV  AK+       R S+LPAEA+AAARS RRSS LS  SSS  A STPLS DG  P  +   +G   DD TPA L A    A  +    P RRLDFL +QK SLGG A VL                   XXXXXXXXXXXXXXXXXXXXX  XXXXXXXXXXXXXXXXXXXXXXXXX             XXXXXXXXXXXXXXXXXXXXXXXXXX                XXXXXXXXXXXXXXXXXX                           QERFRRLRLSEYNREMGGKSLLQ   GE GGEG +GERRSTRRKVQPLQFW+NERVLYAVESTEGVDE    XXXXXXXX                    XXXXXXXXXXX       KRGK  EG+E  RE   G MDPE+VYKKHP + YVKDG GKG+VWDERKALR TRRVV+R +QVVMRPLENEEE+GVALEAGHAFRVLQVARS +DR AHEPSL GYPGWVAGHM+LMPRKGKDPENVGPCSQVFHVL CEKN+LELAVGELGE+A  F+E  ATRFLLG GD+F+LPPMNVY+L+NHSKRG A+VFWTIVKPWS
Sbjct:    1 MASLEAIMPTTAKTPFGADKEELAKYRAGQALNHKAVAPILKDIQGRRTGLVIDNRISKDSEGFEDIDAFWEMASQG-DESSLRG----------ARRSDRRATNLSVGRYSRDSQGLALGLDSLPGEDG--GRRSS-ASSLGAPLSEDVVSAKKN-----LRSSSLPAEAVAAARSRRRSSTLSYESSSPMAGSTPLS-DG--PGLTVSPEGMAEDDHTPAGLSA---AARLSNIKAPSRRLDFLLSQKESLGGGAVVL---------------GQREXXXXXXXXXXXXXXXXXXXXXGTXXXXXXXXXXXXXXXXXXXXXXXXXVDDWGAGGADEYLXXXXXXXXXXXXXXXXXXXXXXXXXXLVGTKEKKKGKTVAREXXXXXXXXXXXXXXXXXXRAPESERDTEVSSYEDEGEDKEERRKTQERFRRLRLSEYNREMGGKSLLQEGSGEGGGEGPVGERRSTRRKVQPLQFWKNERVLYAVESTEGVDERXXXXXXXXXXXREEAVDCMAMKEVLVANQTPXXXXXXXXXXXXXXXXXXKRGKGEEGKEVQRE-AWGEMDPERVYKKHPNYTYVKDGQGKGRVWDERKALRTTRRVVMRVDQVVMRPLENEEEDGVALEAGHAFRVLQVARSREDRAAHEPSLAGYPGWVAGHMTLMPRKGKDPENVGPCSQVFHVLACEKNALELAVGELGEDAFKFNEEAATRFLLGPGDSFHLPPMNVYKLYNHSKRGPAKVFWTIVKPWS 709          
BLAST of NO05G04500 vs. NCBI_GenBank
Match: XP_002289049.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED94485.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 117.5 bits (293), Expect = 2.100e-22
Identity = 89/288 (30.90%), Postives = 125/288 (43.40%), Query Frame = 0
Query:  456 GGIGERRSTRRKVQPLQFWRNERVLYAVESTEGVDESRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAGKMSKRGKIVEGEERGREDGLGVMDPEKVYKKHPGHVYVKDGSGKGKVWDERKALRATRRVVIR--EEQVVMRPLENEEEEGVALEAGHAFRVLQVARSADDREAHEPSLLGYPGWVAGHMSLMPRKGKDPENVGPCSQVFHVLDCEKNSLELAVGELGEE--AFSEGMATRFLLGKGDTFYLPPMNVYRLFNHSKRGKARVFWTIVK 740
            GG   RRS R + +PLQFW+NE+++Y  ++  G+                                       XXXX                  G  +     DP+ + KK     Y  +    G +W E        +VV R         PL N  ++  +   G A +   V    DD          +PG+++G++ L PR  KD E VG CSQVF+V DC+ NSLE A+ +   +   F+   A R+LL KGD F +PP NVYR+ NHSK  KA +FWTI+K
Sbjct:  529 GGTEIRRSHRARFKPLQFWKNEKLIYEAQNESGL-------LGEAMGDMPVVSGVHKAKPTPYKERKVTVKPKXXXXXXXXXXXXXXXXXXXXXDGGPNAKNPFDPKTLGKK-----YQLNNGEHGSIWSETLEDTTESKVVSRLDNRSFSKLPLSNTRKKKESKVVGFASQAFHVPTDQDDL---------FPGYISGNVVLPPRGIKDAEGVGLCSQVFNVGDCQPNSLEFALADPTNQDGEFNAKTAQRYLLSKGDMFQIPPGNVYRIENHSKTDKACLFWTIIK 795          
BLAST of NO05G04500 vs. NCBI_GenBank
Match: EJK76486.1 (hypothetical protein THAOC_01743, partial [Thalassiosira oceanica])

HSP 1 Score: 108.6 bits (270), Expect = 9.900e-20
Identity = 108/298 (36.24%), Postives = 146/298 (48.99%), Query Frame = 0
Query:  456 GGIGERRSTRRKVQPLQFWRNERVLYAVESTEG-VDESRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAGKMSKRGKIVEGEERGREDGLGVMDPEKVYKKHPGHVYVKDGSGKGKVWDERKALRATRRVVIREE--QVVMRPLENEEEEGVALEAGHAFRVLQVARSADDREAHEPSLLGYPGWVAGHMSLMPRKGKDPENVGPCSQVFHVLDCEKNSLELAV----GELGEEAFSEGMATRFLLGKGDTFYLPPMNVYRLFNHSKRGKARVFWTIVKPWSVEEG 747
            GG   RRS R + +PL FW+NE+++Y  +   G + E+                     XXXXXXXXXXXXXXXXXXX                   RE      D + + KK+     ++ G   G VW E        +VV R +       PL ++ ++  +   G A +   V    DD          +PG++AG++ + PR  KD E VG CSQVF+V DC+ NS+E A+    G+ GE  F    A R+LL KGD F +PP NVYR+ NHSK  +A +FWTIVK     EG
Sbjct:  324 GGSRLRRSRRARFKPLDFWKNEKLVYKPQREPGLLGEAMGDMPVVAGVMHALPTPYRERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREP----FDDKSLRKKYK----IRTGE-SGHVWSETLENTLPAKVVSRLDGRSFSKLPLCSDRKKRESKVVGFASQAFHVQTDDDDL---------FPGYIAGNVVMPPRGIKDAEGVGLCSQVFNVGDCQPNSVEFALADPNGQDGE--FDPRTAQRYLLSKGDMFQIPPGNVYRIENHSKTDRATLFWTIVKCTGKAEG 601          
BLAST of NO05G04500 vs. NCBI_GenBank
Match: EJK45242.1 (hypothetical protein THAOC_36151, partial [Thalassiosira oceanica])

HSP 1 Score: 107.8 bits (268), Expect = 1.700e-19
Identity = 66/165 (40.00%), Postives = 90/165 (54.55%), Query Frame = 0
Query:  581 GKVWDERKALRATRRVVIREE--QVVMRPLENEEEEGVALEAGHAFRVLQVARSADDREAHEPSLLGYPGWVAGHMSLMPRKGKDPENVGPCSQVFHVLDCEKNSLELAV----GELGEEAFSEGMATRFLLGKGDTFYLPPMNVYRLFNHSKRGKARVFWTIVK 740
            G VW E        +VV R +       PL ++ ++  +   G A +   V    DD          +PG++AG++ L PR  KD E VG CSQVF+V DC+ NS+E A+    G+ GE  F    A R+LL KGD F +PP NVYR+ NHS+  +A +FWTIVK
Sbjct:  231 GHVWSETLENTLPTKVVSRLDGRSFSKLPLSSDRKKRESKVVGFASQAFHVQTDDDDL---------FPGYIAGNVVLPPRGIKDAEGVGLCSQVFNVGDCQPNSVEFALADPNGQDGE--FDPRTAQRYLLSKGDMFQIPPGNVYRIENHSRSDRATLFWTIVK 384          
BLAST of NO05G04500 vs. NCBI_GenBank
Match: OEU13237.1 (hypothetical protein FRACYDRAFT_189267 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 105.1 bits (261), Expect = 1.100e-18
Identity = 82/292 (28.08%), Postives = 122/292 (41.78%), Query Frame = 0
Query:  459 GERRSTRRKVQPLQFWRNERVLYAVESTEGVDESRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAGKMSKRGKIVEGEERGREDGLGVMDPEKVYKKHPGHVYVKDGSGKGKVWDERKALRATRRVV-----IREEQVVMRPLENEEEEGVALEAGHAFRVLQVARSADDREAHEPSLLGYPGWVAGHMSLMPRKGKDPENVGPCSQVFHVLDCEKNSLELAVGELGEE--AFSEGMATRFLLGKGDTFYLPPMNVYRLFNHSKRGKARVFWTIVKPWSV 744
            G RRS R KV+PLQ+WRNE++ Y   + +G                                            A A K  K+      +   +E+        K YK H G         +  +WD+     A ++VV     +    + +     + E  V  +A  AF +      +DD +        Y G++ G++ L P+  KD E+VGPC+Q F V  C+  ++E+A G+  E         A RFLLG GD F +PP N YRL NHS+     + WTI++P SV
Sbjct:  252 GSRRSKRAKVKPLQYWRNEKMEYGAHNEDG------------YIGEAFGNMPVVTGIQKALPTPYKKRKQPKNNAGAKKNGKKPVSSNAKGNDQEEEFNSKKLRKRYKFHDGE--------EAYLWDDVTDDTADQKVVAYASSMEGNDLPISKKRRKVEGKVTGKAAQAFNI-----PSDDND-------DYVGYIMGNLVLPPKGIKDSESVGPCAQTFTVCHCQSKAVEVAYGDPDEPDGELDPATAQRFLLGPGDMFRVPPGNCYRLENHSETTDCLLTWTIIRPRSV 511          
BLAST of NO05G04500 vs. NCBI_GenBank
Match: CBN74465.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 97.4 bits (241), Expect = 2.300e-16
Identity = 81/292 (27.74%), Postives = 121/292 (41.44%), Query Frame = 0
Query:  459 GERRSTRRKVQPLQFWRNERVLYAVESTEGVDESRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAGKMSKRGKIVEGEERGR-----EDGLGVMDPEKVYKKHPGHVY-VKDGSGKGKVWDERKALRATRRVVIREEQVVMRPLENEEEEGVALE-AGHAFRVLQVARSADDREAHEPSLLGYPGWVAGHMSLMPRKGKDPENVGPCSQVFHVLDCEKNSLELAVG----ELGEEAFSEGMATRFLLGKGDTFYLPPMNVYRLFNHSKRGKARVFWTIVK 740
            G RRS R++V PL+FWR + + Y      GVDE                                           +    KRG   EG++R R     ++ +  + P KV +      + + +   K  VWDE  A   TR+VV+    +V   +    +     E  G A +   V              +G   W+ G + L P   KD E+V   +Q++ V + + ++LE+A+     +     F    A RFLL  GD FY+P  NVYRL NHS R KA ++WTI+K
Sbjct:  563 GVRRSGRQRVAPLKFWRGDNIQY------GVDEK-------------------------GLQVAEGIVKGPALPEPSSPSRKRGS--EGKKRRRPPAVKDEHMSPLSPSKVSEMRKSKKFKLMEKDQKCLVWDEETAAFKTRQVVMSSSNLVSHDVTATHQRAPGKEKIGQAAQAFLVGPE-----------VGISEWLTGRLELPPGAIKDSEHVALSTQIYVVAEGQPDALEIAIAMPSKKTKRTTFDAKTAQRFLLSPGDHFYVPVNNVYRLENHSDRAKAVIYWTIIK 810          
BLAST of NO05G04500 vs. NCBI_GenBank
Match: XP_002185184.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC43316.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 93.6 bits (231), Expect = 3.300e-15
Identity = 74/283 (26.15%), Postives = 115/283 (40.64%), Query Frame = 0
Query:  461 RRSTRRKVQPLQFWRNERVLYAVESTEGVDESRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAGKMSKRGKIVEGEERGREDGLGVMDPEKVYKKHPGHVYVKDGSGKGKVWDERKALRATRRVVIREEQVVMR--PLENEEEEGVALEAGHAFRVLQVARSADDREAHEPSLLGYPGWVAGHMSLMPRKGKDPENVGPCSQVFHVLDCEKNSLELAVGELGEE--AFSEGMATRFLLGKGDTFYLPPMNVYRLFNHSKRGKARVFWTIVK 740
            RRS R + +PL FW+NER++Y     +  DE                                         +      K+ ++ E      E+     D  K+ KK     Y         +WD+    +   + V   +++  R  PL     +      G A +   +    D           Y G++ G+++L P+  KDPE+VGPC+Q F V+  +K ++E+A G   EE     +  A RFLLG  D F +PP N YRL NHSK  +  + WTI++
Sbjct:  402 RRSRRARTKPLDFWKNERIVYGPNDFDD-DE----------YVGVKNMPVPIAFSLAQPTPYKKRKAPVWIDSDKAIALKKHRVAESSAVSIEE--EPFDSSKLRKK-----YDYMNGQDANLWDDGTHEQVFTKAVAFHDELEERKLPLSKLRAKSDGKVVGRAAQAFNIHTECD-----------YVGYIMGNLTLPPKAIKDPESVGPCAQTFTVVSGQKGAIEIAYGAPSEEEGLLDDQTAQRFLLGPRDMFRIPPGNCYRLQNHSKTSECYMTWTIIR 655          
BLAST of NO05G04500 vs. NCBI_GenBank
Match: XP_002184047.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44225.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 93.6 bits (231), Expect = 3.300e-15
Identity = 74/283 (26.15%), Postives = 115/283 (40.64%), Query Frame = 0
Query:  461 RRSTRRKVQPLQFWRNERVLYAVESTEGVDESRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAGKMSKRGKIVEGEERGREDGLGVMDPEKVYKKHPGHVYVKDGSGKGKVWDERKALRATRRVVIREEQVVMR--PLENEEEEGVALEAGHAFRVLQVARSADDREAHEPSLLGYPGWVAGHMSLMPRKGKDPENVGPCSQVFHVLDCEKNSLELAVGELGEE--AFSEGMATRFLLGKGDTFYLPPMNVYRLFNHSKRGKARVFWTIVK 740
            RRS R + +PL FW+NER++Y     +  DE                                         +      K+ ++ E      E+     D  K+ KK     Y         +WD+    +   + V   +++  R  PL     +      G A +   +    D           Y G++ G+++L P+  KDPE+VGPC+Q F V+  +K ++E+A G   EE     +  A RFLLG  D F +PP N YRL NHSK  +  + WTI++
Sbjct:  402 RRSRRARTKPLDFWKNERIVYGPNDFDD-DE----------YVGVKNMPVPIAFSLAQPTPYKKRKAPVWIDSDKAIALKKHRVAESSAVSIEE--EPFDSSKLRKK-----YDYMNGQDANLWDDGTHEQVFTKAVAFHDELEERKLPLSKLRAKSDGKVVGRAAQAFNIHTEGD-----------YVGYIMGNLTLPPKAIKDPESVGPCAQTFTVVSGQKGAIEIAYGAPSEEEGLLDDETAQRFLLGPRDMFRIPPGNCYRLQNHSKTSECYMTWTIIR 655          
BLAST of NO05G04500 vs. NCBI_GenBank
Match: XP_012196321.1 (hypothetical protein SPRG_02355 [Saprolegnia parasitica CBS 223.65] >KDO32654.1 hypothetical protein SPRG_02355 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 93.6 bits (231), Expect = 3.300e-15
Identity = 55/160 (34.38%), Postives = 81/160 (50.62%), Query Frame = 0
Query:  581 GKVWDERKALRATRRVVIREEQVVMRPLENEEEEGVALEAGHAFRVLQVARSADDREAHEPSLLGYPGWVAGHMSLMPRKGKDPENVGPCSQVFHVLDCEKNSLELAVGELGEEAFSEGMATRFLLGKGDTFYLPPMNVYRLFNHSKRGKARVFWTIVKP 741
            G++WDE  A   T +++ R     + PL  E+     + +G A +   V  S              P W++G + L P   K  E+VG C+QVF V+ C+  +LE+A G     AF +  A+RF LG GD FY+P  N Y L NHS   +A + + I+KP
Sbjct:  422 GELWDEASATSKTVKMIGRYGTADLFPLPAED----GVPSGFACQTFNVVGST-----------SVPTWISGRVLLPPGAVKASESVGSCAQVFVVIGCQPMALEVAFGHPSSPAFDDATASRFTLGPGDEFYVPANNAYFLRNHSTSVEAELRFMILKP 566          
BLAST of NO05G04500 vs. NCBI_GenBank
Match: OQR93404.1 (hypothetical protein THRCLA_08449 [Thraustotheca clavata])

HSP 1 Score: 91.7 bits (226), Expect = 1.200e-14
Identity = 41/100 (41.00%), Postives = 61/100 (61.00%), Query Frame = 0
Query:  647 PGWVAGHMSLMPRKGKDPENVGPCSQVFHVLDCEKNSLELAVGELGEEAFSEGMATRFLLGKGDTFYLPPMNVYRLFNHSKRGKARVFWTIVKPWSVEEG 747
            P WV+G + + P   K PE+VG C+Q+F V+ C+  +LE+A G   +  F +  A RF L  GD FY+P  N Y + NHSK  +A + +TI+KP   ++G
Sbjct:  580 PSWVSGRLLMPPLAVKQPESVGSCTQLFVVVSCQPGALEVAYGHPSDPTFIDSTALRFTLSPGDEFYVPTNNAYYVRNHSKTVEAELRFTILKPKIFKDG 679          
The following BLAST results are available for this feature:
BLAST of NO05G04500 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27956.11.800e-15163.60hypothetical protein Naga_100008g107 [Nannochlorop... [more]
XP_002289049.12.100e-2230.90predicted protein [Thalassiosira pseudonana CCMP13... [more]
EJK76486.19.900e-2036.24hypothetical protein THAOC_01743, partial [Thalass... [more]
EJK45242.11.700e-1940.00hypothetical protein THAOC_36151, partial [Thalass... [more]
OEU13237.11.100e-1828.08hypothetical protein FRACYDRAFT_189267 [Fragilario... [more]
CBN74465.12.300e-1627.74conserved unknown protein [Ectocarpus siliculosus][more]
XP_002185184.13.300e-1526.15predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_002184047.13.300e-1526.15predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_012196321.13.300e-1534.38hypothetical protein SPRG_02355 [Saprolegnia paras... [more]
OQR93404.11.200e-1441.00hypothetical protein THRCLA_08449 [Thraustotheca c... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL085nonsL085Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003407NSK003407Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G04500.1NO05G04500.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|585138gene_3266Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100008g107gene2613Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G04500.1NO05G04500.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G04500 ID=NO05G04500|Name=NO05G04500|organism=Nannochloropsis oceanica|type=gene|length=3177bp
ATGGCGTCCCTCGAGGCCATGATGCCTAACCAGGCCAGACAGTCCACTCC
TGGCGACAAAGAAAAGATGGTGAAGTACCGGGCCTCTCAAGCCGCCAACG
CCAGTGGTATCGCCTCTAAGCTCAAGGATATCCAAGGGAGACGTACGGGG
TTGGTAATTCATGATCGAGTGAGCAAGGACTCGGAGGGTTTCGAAGACAT
CGATGCATTTTGGGAGCTCGCTTCAACGGGTGCTGATGAGCTTTCGGAAA
GAGGCAGCAGCGCCGGAGGGAGGGCTGCCCGTCGTGCAGCCGCGGGAGCA
GGCAATGGAGGAGGAAACAGTGTGGGGAGATATTCACGTGAGAGTAATGG
GTTAGAGCTGGGGCTAGATTCGACCCCAGGTGGGGGAAGTACGATGGGAA
GGAGGAGCAGTGGTGTGAGTAGTTTGGGCATGCCGCTGAGTGATGATGTG
TCGATGGCGAAGCGAGGAGGAGGTAGAGGGATGAACCGACGATCTACCCT
GCCGGCTGAGGCCATTGCGGCGGCTCGCTCTCGACGAAGCAGTATACTGT
CGACCACCTCGTCATCTCTCCCTGCTTCCTCCACCCCTCTTTCGCTTGAT
GGTTCCTTGCCGGCCCGCAGCGACGAGGAAGACGGGGCGGAAAGGGACGA
CAGCACCCCTGCCAGCCTCCCGGCTCGAGCTACGGGTGCCGCTGCGACAG
CTGCTGCTGTCCCTCGTCGTCGGTTGGACTTTCTTCGCAACCAGAAGGGA
AGCCTGGGAGGGTCTGCAGCTGTGCTGCGGCCTAGTGGCGGGAAGGAGAG
AGGGAGGGAGGGCGGACAGGATTCGGGGGAGGAAAGCGAGGCGCCGACCG
AGGAGGAGTTCCAGGGGGAGGAAGACGCGGAAGCGGCAGCAGCAGCTGCA
GCGGCGGTGGCGGCACGACGAAGGAGTAGCATGGGAGGGGAAGAGGGAGG
GGGTTTTGATGGTGACTGGGCGGCCGGGGGGAGTGATGATTATATGGGGG
AAGAGGACGAGGAGGGAAGGAGGGAAGAAAGGATTGACGGAGAGAGTCCT
GTGAAAGGGACGGAGGAGGAGGAGGAGGAAAAGGAGAAGGCAGCGGCGGC
AGCTAAGATCAAGAAGGAGAAGAAAGGAGCAGCTGCTGCGGCCGCGGCGG
TCAAGAAAAAAGCGACAGCAGAGAAGAGGAAGAAACAAAACAAAGAGAAG
CCTAGGAATGAGTCAGACACGGAATTGTCGTCCTATGAGGAGGATGGGGG
CGAGGACGGAGAGGAACGCCGCAAAACCCAGGAGCGATTTCGACGCCTGC
GCTTGTCCGAGTACAACCGTGAGATGGGGGGAAAAAGTTTGCTGCAGGGA
GAGGAAGGGGGAGAGGGGGGAATAGGGGAGCGAAGGTCGACGAGGAGAAA
GGTGCAGCCATTGCAGTTCTGGAGGAATGAGCGGGTGCTGTATGCCGTGG
AGAGCACGGAGGGTGTGGATGAGAGTAGGAGGAAGGAGGGCGGGAGGGAG
GGCGGGGTGGATTGCATGATGATGAAGGAGGTGGTGGTGGCAAATGATAC
GCCAGTGGCGAGGAGGAGGAGGAAGAGAAAGGGAGGGAAGTCGACCGCCA
CTGCTGGGAAGATGAGCAAGCGTGGGAAGATCGTTGAAGGGGAGGAGAGA
GGGAGGGAGGACGGGTTGGGGGTGATGGACCCCGAGAAGGTTTACAAGAA
ACACCCGGGCCATGTGTATGTGAAGGATGGTAGCGGGAAGGGCAAGGTGT
GGGACGAGCGGAAGGCGCTCCGGGCGACACGAAGGGTGGTGATCCGGGAG
GAGCAGGTGGTGATGCGACCCTTGGAGAACGAGGAGGAGGAGGGGGTCGC
TTTGGAAGCTGGGCATGCTTTTAGGGTGTTGCAGGTGGCTCGGTCCGCGG
ATGATCGAGAGGCGCATGAACCGTCGTTGCTAGGATACCCGGGGTGGGTC
GCAGGGCACATGTCCCTGATGCCGAGGAAGGGTAAAGACCCCGAAAACGT
TGGTCCGTGCTCTCAAGTGTTCCATGTCTTGGATTGCGAGAAGAATTCGT
TGGAGCTGGCGGTGGGGGAGTTGGGGGAGGAGGCGTTCAGTGAAGGGATG
GCGACGAGATTTCTTCTGGGGAAGGGGGATACGTTCTACTTGCCGCCGAT
GAACGTGTACCGGTTGTTCAATCATTCGAAGCGGGGGAAGGCCAGGGTGT
TTTGGACGATCGTGAAGCCCTGGAGCGTGGAGGAAGGGGAGGGAGGAAGG
GGGGGAGGGGCCGATTCCCAGAGTCAGAGTCAGGAGGTGATGCGGATGGA
GGAGGAGGGAAAGAAGGAGGTGCCTGCGCCAGTGGCGGTGAAGCGGGCGA
GGAAATCGTCTGTGGCACCGACGCCGGTGGGAAAGAGGGAGAAGGGGAAG
AGAGATTCCTCCATTGCTACGGCGACCAAGTCGGGAAAGGGGGCAAGAAA
GAGTAGTATGGCAGCATCGGCAGCGGCGGCAACGGCGGCAAGCGCAAGTG
AGTGCGAAGAGGAGGAAGAGGAAGAGGAGGAGGAAGTGGCAGAGCCGAGC
GGGGAGGAGAGCGGAAGTGAGCAGGGGGTGGAGGCAAGTGAGAGTGAGTC
GTCGGACTCGGAGATGTCAGAGTAAGGAGAAAGAGGTATAGGAGGCGAGG
AATGCTAGCATTGCAAGAAATTGCTGTCTTGTTTGTCCAATATATATTTA
TTTATTCTTCCCTGTCGATCGAAATGCGTGAGTGATGGGGGAGAGGGGAT
TTCCTTTGTTGTAAGTCAAGCGGAGGAAGAAGCGACGACGGGGGCAGGAG
GACGATGAGAACGACTTTTATACGAATGAGTGTGTGCGTATCGCTGGATT
TCCCACCTTCGTTTCGAAAGGGACACAGAATGCAGAAAGCGGAAATCGGA
GAGGAAAAGAGAGGAGGAAAAAAAAGATGAGCATGGACGGATATGAAAAA
CGGAGGGACATTAGAAATAAAAGAAAATGGCCAAGCTCAAAAAGAGGTCC
AGCGACCGACGGGAAACGTCCACCAAGAAGAAGCAGCAGCAGCAGTGGCA
GCAGCAGCAGCAGCACCAGCAGCAGCAGCACCACCACCACCTCGATCAAC
ATTCACAGAGACGAGACTGAGACACCAAGAAGAGACTACGAACAAGAAAA
GAAGAAAAGAAACATAGATGGAAATAA
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protein sequence of NO05G04500.1

>NO05G04500.1-protein ID=NO05G04500.1-protein|Name=NO05G04500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=875bp
MASLEAMMPNQARQSTPGDKEKMVKYRASQAANASGIASKLKDIQGRRTG
LVIHDRVSKDSEGFEDIDAFWELASTGADELSERGSSAGGRAARRAAAGA
GNGGGNSVGRYSRESNGLELGLDSTPGGGSTMGRRSSGVSSLGMPLSDDV
SMAKRGGGRGMNRRSTLPAEAIAAARSRRSSILSTTSSSLPASSTPLSLD
GSLPARSDEEDGAERDDSTPASLPARATGAAATAAAVPRRRLDFLRNQKG
SLGGSAAVLRPSGGKERGREGGQDSGEESEAPTEEEFQGEEDAEAAAAAA
AAVAARRRSSMGGEEGGGFDGDWAAGGSDDYMGEEDEEGRREERIDGESP
VKGTEEEEEEKEKAAAAAKIKKEKKGAAAAAAAVKKKATAEKRKKQNKEK
PRNESDTELSSYEEDGGEDGEERRKTQERFRRLRLSEYNREMGGKSLLQG
EEGGEGGIGERRSTRRKVQPLQFWRNERVLYAVESTEGVDESRRKEGGRE
GGVDCMMMKEVVVANDTPVARRRRKRKGGKSTATAGKMSKRGKIVEGEER
GREDGLGVMDPEKVYKKHPGHVYVKDGSGKGKVWDERKALRATRRVVIRE
EQVVMRPLENEEEEGVALEAGHAFRVLQVARSADDREAHEPSLLGYPGWV
AGHMSLMPRKGKDPENVGPCSQVFHVLDCEKNSLELAVGELGEEAFSEGM
ATRFLLGKGDTFYLPPMNVYRLFNHSKRGKARVFWTIVKPWSVEEGEGGR
GGGADSQSQSQEVMRMEEEGKKEVPAPVAVKRARKSSVAPTPVGKREKGK
RDSSIATATKSGKGARKSSMAASAAAATAASASECEEEEEEEEEEVAEPS
GEESGSEQGVEASESESSDSEMSE*
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Synonyms
Publications