NO05G04380, NO05G04380 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO05G04380
Unique Name	NO05G04380
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	5723
Alignment location	chr5:1125797..1131519 +

Link to JBrowse

Properties


Property Name	Value
Description	nuclear factor Y, subunit B1

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr5	genome	chr5:1125797..1131519 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046982	protein heterodimerization activity
GO:0005515	protein binding
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009072	Histone-fold
IPR003958	CBFA_NFYB_domain

Vocabulary: **Biological Process**
Term	Definition
GO:0009058	biosynthetic process
GO:0006139	nucleobase-containing compound metabolic process

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Homology

[Close]

BLAST of NO05G04380 vs. NCBI_GenBank
Match: EWM28041.1 (ccaat-box binding factor hap3 [Nannochloropsis gaditana])

HSP 1 Score: 193.7 bits (491), Expect = 7.600e-46
Identity = 97/98 (98.98%), Postives = 97/98 (98.98%), Query Frame = 0

Query:  104 VREQDRYLPIANISRIMKKSLPANAKIAKDAKETVQECVSEFISFITSEASDKCQQEKRKTINGDDLLWAMSTLGFDKYVEPLKLYLVKYRESVKGGE 202
            VREQDRYLPIANISRIMKKSLPANAKIAKDAKETVQECVSEFISFITSEASDKCQQEKRKTINGDDLLWAMSTLGFDKYVEPLK YLVKYRESVKGGE
Sbjct:   21 VREQDRYLPIANISRIMKKSLPANAKIAKDAKETVQECVSEFISFITSEASDKCQQEKRKTINGDDLLWAMSTLGFDKYVEPLKHYLVKYRESVKGGE 118

[Close]

BLAST of NO05G04380 vs. NCBI_GenBank
Match: XP_002177535.1 (histone-like transcription factor [Phaeodactylum tricornutum CCAP 1055/1] >EEC51998.1 histone-like transcription factor [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 178.3 bits (451), Expect = 3.300e-41
Identity = 87/96 (90.62%), Postives = 92/96 (95.83%), Query Frame = 0

Query:  104 VREQDRYLPIANISRIMKKSLPANAKIAKDAKETVQECVSEFISFITSEASDKCQQEKRKTINGDDLLWAMSTLGFDKYVEPLKLYLVKYRESVKG 200
            +REQDRYLPIANI+RIMK +LP NAKIAKD+KETVQECVSEFISFITSEASDKC QEKRKTINGDDLLWAMSTLGFDKYVEPLKLYL KYRE+VKG
Sbjct:   19 IREQDRYLPIANIARIMKNTLPENAKIAKDSKETVQECVSEFISFITSEASDKCLQEKRKTINGDDLLWAMSTLGFDKYVEPLKLYLSKYREAVKG 114

[Close]

BLAST of NO05G04380 vs. NCBI_GenBank
Match: OEU20809.1 (histone-fold-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 177.2 bits (448), Expect = 7.300e-41
Identity = 86/96 (89.58%), Postives = 92/96 (95.83%), Query Frame = 0

Query:  104 VREQDRYLPIANISRIMKKSLPANAKIAKDAKETVQECVSEFISFITSEASDKCQQEKRKTINGDDLLWAMSTLGFDKYVEPLKLYLVKYRESVKG 200
            +REQDRYLPIANI+RIMK +LP NAKIAKD+KETVQECVSEFISFITSEASDKC QEKRKTINGDDLLWAMSTLGFDKYVEPLKLYL KYRE+V+G
Sbjct:   25 IREQDRYLPIANIARIMKNTLPENAKIAKDSKETVQECVSEFISFITSEASDKCLQEKRKTINGDDLLWAMSTLGFDKYVEPLKLYLSKYREAVRG 120

[Close]

BLAST of NO05G04380 vs. NCBI_GenBank
Match: GBG33799.1 (Nuclear transcription factor Y subunit B [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 177.2 bits (448), Expect = 7.300e-41
Identity = 88/96 (91.67%), Postives = 91/96 (94.79%), Query Frame = 0

Query:  104 VREQDRYLPIANISRIMKKSLPANAKIAKDAKETVQECVSEFISFITSEASDKCQQEKRKTINGDDLLWAMSTLGFDKYVEPLKLYLVKYRESVKG 200
            VREQDRYLPIANISRIMKKSLP NAKIAKDAKETVQECVSEFISFITSEASDK QQEKRKTI GDD+LWAMSTLGFD YVEPLK+YL +YRESVKG
Sbjct:    8 VREQDRYLPIANISRIMKKSLPPNAKIAKDAKETVQECVSEFISFITSEASDKVQQEKRKTITGDDVLWAMSTLGFDNYVEPLKVYLARYRESVKG 103

[Close]

BLAST of NO05G04380 vs. NCBI_GenBank
Match: CBN79369.1 (histone-like transcription factor [Ectocarpus siliculosus])

HSP 1 Score: 175.6 bits (444), Expect = 2.100e-40
Identity = 86/95 (90.53%), Postives = 92/95 (96.84%), Query Frame = 0

Query:  104 VREQDRYLPIANISRIMKKSLPANAKIAKDAKETVQECVSEFISFITSEASDKCQQEKRKTINGDDLLWAMSTLGFDKYVEPLKLYLVKYRESVK 199
            +REQDR+LPIANISRIMKKSLP NAKIAKDAKETVQECVSEFI FITSEASDKC+QEKRKTING+DLLWAMSTLGFDKYV+PLK+YL KYRESVK
Sbjct:   12 LREQDRFLPIANISRIMKKSLPDNAKIAKDAKETVQECVSEFICFITSEASDKCKQEKRKTINGEDLLWAMSTLGFDKYVDPLKIYLSKYRESVK 106

[Close]

BLAST of NO05G04380 vs. NCBI_GenBank
Match: XP_002525186.1 (PREDICTED: nuclear transcription factor Y subunit B-10 [Ricinus communis] >EEF37152.1 ccaat-binding transcription factor subunit A, putative [Ricinus communis])

HSP 1 Score: 175.3 bits (443), Expect = 2.800e-40
Identity = 87/105 (82.86%), Postives = 95/105 (90.48%), Query Frame = 0

Query:  104 VREQDRYLPIANISRIMKKSLPANAKIAKDAKETVQECVSEFISFITSEASDKCQQEKRKTINGDDLLWAMSTLGFDKYVEPLKLYLVKYRE-------SVKGGE 202
            VREQDRYLPIANISRIMKK+LPAN KIAKDAKETVQECVSEFISFITSEASDKCQ+EKRKTINGDDLLWAM+TLGF+ Y++PLK+YL +YRE       SVKGGE
Sbjct:   32 VREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREMEGDTKGSVKGGE 136

[Close]

BLAST of NO05G04380 vs. NCBI_GenBank
Match: XP_008783683.1 (PREDICTED: nuclear transcription factor Y subunit B-like isoform X1 [Phoenix dactylifera] >XP_008783684.1 PREDICTED: nuclear transcription factor Y subunit B-like isoform X1 [Phoenix dactylifera] >XP_008783685.1 PREDICTED: nuclear transcription factor Y subunit B-like isoform X1 [Phoenix dactylifera])

HSP 1 Score: 174.9 bits (442), Expect = 3.600e-40
Identity = 88/105 (83.81%), Postives = 95/105 (90.48%), Query Frame = 0

Query:  104 VREQDRYLPIANISRIMKKSLPANAKIAKDAKETVQECVSEFISFITSEASDKCQQEKRKTINGDDLLWAMSTLGFDKYVEPLKLYLVKYRE-------SVKGGE 202
            VREQDR+LPIANISRIMKK+LPANAKIAKDAKETVQECVSEFISFITSEASDKCQ+EKRKTINGDDLLWAM+TLGF+ Y+EPLKLYL KYRE       S KGG+
Sbjct:   28 VREQDRFLPIANISRIMKKALPANAKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKLYLQKYREMEGDSKLSAKGGD 132

[Close]

BLAST of NO05G04380 vs. NCBI_GenBank
Match: XP_008783687.1 (PREDICTED: nuclear transcription factor Y subunit B-like isoform X2 [Phoenix dactylifera])

HSP 1 Score: 174.9 bits (442), Expect = 3.600e-40
Identity = 88/105 (83.81%), Postives = 95/105 (90.48%), Query Frame = 0

Query:  104 VREQDRYLPIANISRIMKKSLPANAKIAKDAKETVQECVSEFISFITSEASDKCQQEKRKTINGDDLLWAMSTLGFDKYVEPLKLYLVKYRE-------SVKGGE 202
            VREQDR+LPIANISRIMKK+LPANAKIAKDAKETVQECVSEFISFITSEASDKCQ+EKRKTINGDDLLWAM+TLGF+ Y+EPLKLYL KYRE       S KGG+
Sbjct:   28 VREQDRFLPIANISRIMKKALPANAKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKLYLQKYREMEGDSKLSAKGGD 132

[Close]

BLAST of NO05G04380 vs. NCBI_GenBank
Match: XP_008783688.1 (PREDICTED: nuclear transcription factor Y subunit B-like isoform X3 [Phoenix dactylifera])

HSP 1 Score: 174.9 bits (442), Expect = 3.600e-40
Identity = 88/105 (83.81%), Postives = 95/105 (90.48%), Query Frame = 0

Query:  104 VREQDRYLPIANISRIMKKSLPANAKIAKDAKETVQECVSEFISFITSEASDKCQQEKRKTINGDDLLWAMSTLGFDKYVEPLKLYLVKYRE-------SVKGGE 202
            VREQDR+LPIANISRIMKK+LPANAKIAKDAKETVQECVSEFISFITSEASDKCQ+EKRKTINGDDLLWAM+TLGF+ Y+EPLKLYL KYRE       S KGG+
Sbjct:   28 VREQDRFLPIANISRIMKKALPANAKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKLYLQKYREMEGDSKLSAKGGD 132

[Close]

BLAST of NO05G04380 vs. NCBI_GenBank
Match: XP_008783689.1 (PREDICTED: nuclear transcription factor Y subunit B-like isoform X4 [Phoenix dactylifera])

HSP 1 Score: 174.9 bits (442), Expect = 3.600e-40
Identity = 88/105 (83.81%), Postives = 95/105 (90.48%), Query Frame = 0

Query:  104 VREQDRYLPIANISRIMKKSLPANAKIAKDAKETVQECVSEFISFITSEASDKCQQEKRKTINGDDLLWAMSTLGFDKYVEPLKLYLVKYRE-------SVKGGE 202
            VREQDR+LPIANISRIMKK+LPANAKIAKDAKETVQECVSEFISFITSEASDKCQ+EKRKTINGDDLLWAM+TLGF+ Y+EPLKLYL KYRE       S KGG+
Sbjct:   28 VREQDRFLPIANISRIMKKALPANAKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKLYLQKYREMEGDSKLSAKGGD 132

The following BLAST results are available for this feature:

BLAST of NO05G04380 vs. NCBI_GenBank

BLAST of NO05G04380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM28041.1	7.600e-46	98.98	ccaat-box binding factor hap3 [Nannochloropsis gad...	[more]
XP_002177535.1	3.300e-41	90.63	histone-like transcription factor [Phaeodactylum t...	[more]
OEU20809.1	7.300e-41	89.58	histone-fold-containing protein [Fragilariopsis cy...	[more]
GBG33799.1	7.300e-41	91.67	Nuclear transcription factor Y subunit B [Aurantio...	[more]
CBN79369.1	2.100e-40	90.53	histone-like transcription factor [Ectocarpus sili...	[more]
XP_002525186.1	2.800e-40	82.86	PREDICTED: nuclear transcription factor Y subunit ...	[more]
XP_008783683.1	3.600e-40	83.81	PREDICTED: nuclear transcription factor Y subunit ...	[more]
XP_008783687.1	3.600e-40	83.81	PREDICTED: nuclear transcription factor Y subunit ...	[more]
XP_008783688.1	3.600e-40	83.81	PREDICTED: nuclear transcription factor Y subunit ...	[more]
XP_008783689.1	3.600e-40	83.81	PREDICTED: nuclear transcription factor Y subunit ...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL085	nonsL085	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR092	ncniR092	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR117	ngnoR117	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK003419	NSK003419	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO05G04380.1	NO05G04380.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|585079	gene_3253	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100008g90	gene2599	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO05G04380.1	NO05G04380.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO05G04380 ID=NO05G04380|Name=NO05G04380|organism=Nannochloropsis oceanica|type=gene|length=5723bp
AGTACAAGACGTGTGTTCCTTTTTACTTTTCGTTTTTGCCTTGATGCATC
CCTTGCCTTCTTTTTCATCTATAAACACTCAATTAAACCGAAGGCGTCCA
TCCTGGCGACGGCGGGTCTTGCCGCTCCTGCAACGGGTATCTTCCTCCTC
CAAAATTCCTTCCCTCTCCCCAACTATGTCCCCGCTCTTCCCCCCGTCCT
CCCCCCTTTCCCCCGCGATGATGATAAGAGGACATTTGCAGATTACTCCG
CATGGTGGCGCGCAACTGATCCTGCGAAGACATATGTATGACCGGCCTTC
CGTCCCCAGGCGCCAATACGACAATTCTTCCCGCTGCCGCCTCGCCCATG
AAACACTCCTCCACACTATCGTATTGCTGCCAGACTCTGGTCAATTTCGA
GGCTCCCGTATGCGTGAGCACGTATCCTCTTCGTGACACATACGCTTCTT
TCGGTAATGCCGATGCATGCGTTCCCACCTTAAATCGATGCTTCGCCTTC
TGCACCCCCGAGGGCAAGACAAACGACAAGGCAAGCACATCCCACGGGAA
GGGCCTAAATCGCAGTTCCAACAACAAGGATCGGAGCTCCGCCCCCAACA
AAGGAGATCCCACAACGTCTCCTTCCAAAACCACGATTTCTGAGGGCTTT
TTGTTGGGGTAGTCCAACTCATCCATCCGACTATTACTAAACATGTGCCA
AATCTCCACATGCTCCCACCCGCCCTCAGCCGTCCACGCCGCCCGTTTCA
TATCCTCTCCCCCACCCATCTCTTCCCCTTCCCCCTTCTCCCCTACACCG
CGGTTCCCTCTCCCACCCGCGACGTGGAGTGTGTTGTGTGTCATCTGATC
CAAGACGCTTGCGCTAGCCACGCGTATGGACAAATCGTGCAATATACCTT
GTAATTCTATCTCAGCCTGCTGCTCGATCGAAGTCGAGCACGGAAAGGAC
GACGACGTAGAGGACACAGCGGAAGACGAACAAAGAATGGCGCAGCAATG
CGGGCGCTGTTGGTTGTAAACGACGGTGCGAAGGAGGTGGATGGGGAGGA
GGGCGTCCCGTGCCTCGGCAGGGAGGGACTGAAACCAAGAAATGACAGGC
TTGAGCTCACCCACATTCACCCCCGGTAGATCCGCCAACCCCTTACTTGC
CCACAGACGAGTTGCTTGGTACCGTCGGCGTCGCTTCCGCTCTTCCTTGT
CCTGCTGGTGCTGCTGGTGCTGCGGTTGGTCCTCCTCCTGCCATTCCGGA
TGGAGGTCCTCAGCAGCCAGCACCTCCGAAAAGCACAATAACAAGCGGCG
CAGCATTCCCCCCTCCTTCCGTTCGATTGCGTCTCGAAAAGTCACTTCTC
GCGCCAACCCTGCTAAGAGCCGCATCATCCCTGGTGGGGTAGTCAGCTCC
CCCGTAGCGTACTCCTGCAATACGTTCGCCTCCATCCACTGCAGAGACTG
CACACTCGCCAGCAGCACCAAGGCGCGGACAAGCTCCTCTGTCTCCGCTT
CCTTTTTCGCCTTCTTCCCTTCTTCTTCAACCTCCTCTTCCTCCACTTCA
TCGTCCTCGTCCTCGTCCATGAGTAACAATTTGGCCTTGAATTCTTCCGC
GAGCTCCTCCGGAGCCTCCACCCCGTCGTCATCCGCGTCCTTGTTTTTCC
TCTCCCTCCCCATCACATACCGGGAAAACCCCTCATAGGCCATCTCAGCC
ACCCATGCCTTGGCCTCCGTCTCCCCGTCGACACCACAAGTAGCGGCAGC
AGAAGCAATATCAGTGGCAGCTGTAGCAGTACTATCAGCAACAGCCAAAG
TCATGGGGACAGCGGCCGCAGCCGATGAGGAGGAGGAGGAAGAAGGCAAC
TTTCTACTGCCGCTGCTACTGCTACTCCCACCTTTCAGGGTATCCCGCTG
GTGCTTGTACGCCTCATGAAAACAAACCAGCAGGGCCCTCGCCATCACCC
CCTCCTTCTCCCCCAACACCGCCGGCCACAGATGGAAGAACGCAGCTAAC
GGTCCCAGTGACGCCAGCTTTCCGTTCAACAGAAAGATGTCATACACCAA
TGCGCGGACTCTCTGTAGCAGCCTGAGCTCTTTACACAAACAGGTAAACA
ATGCAGCAGCCGCAAACCCATCACGTTGCCGGCGGAAAGCAAATTCTTTC
TCCCTCTCCCTCTCATGATCCGTTTCTGTCTGTGACTTTCGCCCTTGCCG
GTGACCGCCGCTGATATCGCCATCCTCCTTCCCTTCCTTCTGCTCCTTAT
CCTCTTCCTGCTTTTCCTCCTCTTCCTCGTCTTGCTCCTTTTCCTCCTCT
TCCTTCTCCTCCTCAATACCCCCGTCCCCGCCCTCCTTCCCTCCCTCCGC
TACCTCCCCCTTTGCTGGCTTGTACAACTGCTGCAGCAATTCATCCAGTA
TCAACTCCACAAAATAGGCTCCGTAATCTTTCTCTTCACACAACCGCAAT
ACTACCCCCGCAGCCAGCCCCACCAGCCTCCCCGCCTCGCTATTCTTGTA
TACTGGGTCCTGCAACCAATACCCCTCCCTGTCCCTCCTCAGCGCTTGAG
ACATCTTCCTCTTGTAAGTGACCAAAATCCGATGACAAGCCATCTGCGGC
GCAATGTGTGCCGCCTCCCGTAACAGTAAAACCATGCGCTCCACGCCCAT
ATTCATTTTGTCCTCCGTCAACGATGGCAACTCCCGACAAAACACATAAC
GATCCAACGCCAGTTGAGTAAACTTCGATTCAGCGAACGGACGGTCCTTC
ACCATGCCCCATAACAAAGCTACTTCCTCTAGGATGGTCGATGTCCCTCC
TTCCCCCTCCTGACCTTGTCTTCCTTTTCGTCCTCCTGGCTCTTCTCCAA
ATTCTTCTTCCTTCTCTTCCTCCTCTTCCTCATCTCGCTCTTCTTCTTCT
TGCTCTCCGTCCCCATCGCCTTCGTGCTGATCTTTGACTGCAGCCTCAAC
GGTTTGCTCTTCTCGTTCCTTATCTGCTTCCTTCTGCTTCTCTTTCTTGG
CAATACTGGTAGTAGGGGTGCTTTGGGAAGCGCTTATGCTTTTGGTGGTG
GCAGCCTCTCGTTGACTGCTCTTACTCGTACTTTTCTTGAGACTCAAAAT
ATCGGTGGCTTTGAAACTCTTGGTTAATTCTTGCTCTTGTGGATTCTGTG
TGGAAGGACGGGAGAGAAGGAGGGTGGGTGGGAGGAAGGGCGTGAGTCGT
CCTCCGTTGTCCGACAGATAGTGGGCAAGGAGGTAGGGAGGAGAGGACAA
AGAGACGACAAGAGAAGAATTCGTGGGGAGAAACCATTGGGGATCAGCAT
ACGCTCGGGACTGTAAACATCACACATTCAAGCCGTACACACTGATACAG
AGGAAGAGACTGACATACTGTGGGAGGCTTCGTTGCCGCCTTGGCTTTCT
TGTTGCCGCTGCCCCCTCTGCCGCCGCAACCATCGCCCTCCACATCCATG
GCCCTATTTCCATCACAAGCATCGTCGCGGTCCGCACGTTTCCGCTTGCC
AGGGACCGGCAGACCATGCGCCTCGAGCGTGTCCTCGAGTTCTTCTACCC
GCTCTTCTGTGGCGGCCAGCTTGCTTTCTAAGTCAGCAATGTGCTCCTTT
TGGGACTTGATAGTCTTGACGGCGTTGGCCATGGCGGCCTTGTACCGCTC
TTCGTTGGTACCCGCCATCGTCTTTGGTAATGTGCGGGCTGGGTGTTGTC
TGTTGGGGTTGGTTGAGAATGGCTTTGTGGTGACAGGAATACATAAAGGG
GTGGGAGGCTAAAATCCAAGGACCACACTGAAGAATCACAGCGCTTACGC
AATCTCCATGACAACACCGTGCTAATGCTCATCATGGTTGTCTGGGAGTG
GCTGCGTGAATGAAGGACAGACTGAGAGCTAACACCACAAGCAAAATACA
ATGCGCATCATGTCTCATATGTGACCATCGAGTCGACTTTTCTCGCTCCC
ACGATCGCTCATGTAGATGCCTTTCCCCCCCCTTAACCACTTGGCACCTT
TCCATCTCCCCTTCCAGGCCCTTCAAAACGACCTGGTCAAACAGATGGTG
ACAATGCCGTGGCCTGTAGACGATGCGCATGGCTGGCGGAGTCTCGGCAA
AGACCCTATGAAGAAGCAAGAACAGAATAATGACCCTCACGCACCCCCCC
TCCAACAGCACAGGCAGGCTCACTCGAGCGGGAAAAGGAGGTGCACAGCT
ATGGAAGAAACGGGTGGCTACGAAATGGGCGGAGGCGGAGGAGGTGGCGC
CGGAGGGGGCGGGGGAGGGGATGAGGTCAGGGAGCAGGACCGATACTTGC
CCATAGCCAACATCAGTCGAATCATGAAGAAGTCTCTGgtgagtgcttta
cgttgcgggtagtgagtgctcatctttgttgcagttttttaagcggagtg
gaccgagaatgaagagcgtgcgcttgtatttttggatcttgtcccctcgt
tacaatcccccgtatctccccatctcacacgcttttgcttccttccatac
cccttctccacagCCCGCCAATGCCAAGATCGCCAAGGACGCCAAGGAAA
CTGTACAAGAATGTGTTTCAGAATTCATCTCCTTCATCACGTCGGAAGCC
AGTGACAAATGTCAACAAGAGAAACGCAAGACTATCAACGGCGACGACCT
TCTTTGGGCCATGAGCACCCTTGGCTTTGATAAATACGTCGAGCCCCTTA
AGCTCTACCTGGTGAAGTATCGTGAATCCGTCAAAGGTGGCGAAAAATCA
GATGGAGGGAAAAAAGGCAAGGCTGGAGGGGAGGAGGCGAGCGCGTCGGT
TACCACGGGCAGCAGTGCAGCGGCGCCTGTCACCGCGAGTGCTTCAGGTA
GTGGTGGAGGAGGAGCGGGCATGGTGATGAGCGGGTCAGCATCGGAACAA
GCAACAGTGCAGCAACAGCAACAGCAACAACACGCAGCTTACCAACTGCC
GCCTGTAGGGCAAGAGCAGCAGCCCGCTCCGTCTTCGGGGCCTTAAGGGT
GTTAAATTTTTGTATGTTTGTTGGTGTTTGACTGCTCGTGTGCAGATGAG
AGTAAGGAGAGAGGACAAGAGTGTCTACGTGCTTTTGTATGTTGGAACTA
GGTAGCGATGTTCAGCAAGGGATCGATTTCTATATCCGTCATGTGTCTAT
AGAAGGCCAGGACGGGAAAAGGAAAAGAGAGAAAGGAGAGAGGGCGACCA
AAAGAAGGAAAGGCTAGGATAGTTGTGGATAATGCTTCTCCGCGAAACGG
CAGAGAAGAGGATTGACACAGAGGAAAATGACAACACCATTAAAAGTTGG
TGACAAAATATGCCTGCAAATAACCACAAGAATTGGTCGAAAGGGAAAAA
GCAGCACAAGCACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCATCATAATTGTCACACCATCATCATGAGCATCAACAGCAGCAACA
GCCGTCGCAACAGCGACAGCAACACATTCGGAGAGTCATGGAAGGATAGG
CAAACGACAAACAGGGAGAACCATAGGACGTGCTGTAGATGCCAACACTA
AAGAGAGATATCGTGTGAGGTTTGCAGAAGAGAAGAAAAGAAAATTCCAG
CCGCTATCCCTTCAAGAAATGGGAGGAAAGACTTCAAAACCCCGTAACCC
ACGTACCTACTCGCTCACTTAATTAAACAGCAGCAGCAACTCAAAAAATA
ATGAGGAGAAATCACACTACAAG

protein sequence of NO05G04380.1

>NO05G04380.1-protein ID=NO05G04380.1-protein|Name=NO05G04380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=285bp
MPFPPLNHLAPFHLPFQALQNDLVKQMVTMPWPVDDAHGWRSLGKDPMKK
QEQNNDPHAPPLQQHRQAHSSGKRRCTAMEETGGYEMGGGGGGGAGGGGG
GDEVREQDRYLPIANISRIMKKSLPANAKIAKDAKETVQECVSEFISFIT
SEASDKCQQEKRKTINGDDLLWAMSTLGFDKYVEPLKLYLVKYRESVKGG
EKSDGGKKGKAGGEEASASVTTGSSAAAPVTASASGSGGGGAGMVMSGSA
SEQATVQQQQQQQHAAYQLPPVGQEQQPAPSSGP*

Synonyms

Publications