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Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr5 | genome | chr5:1125797..1129959 - |
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003684 | damaged DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006289 | nucleotide-excision repair |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR004583 | DNA_repair_Rad4 |
Homology
BLAST of NO05G04370 vs. NCBI_GenBank
Match: EWM28004.1 (hypothetical protein Naga_100008g91 [Nannochloropsis gaditana]) HSP 1 Score: 885.2 bits (2286), Expect = 2.100e-253 Identity = 565/935 (60.43%), Postives = 658/935 (70.37%), Query Frame = 0
Query: 166 EGGTSTILEEVALLWGMVKDRPFAESKFTQLALDRYVFCRELPSLTEDKMNMGVERMVLLLREAAHIAPQMACHRILVTYKRKMSQALRRDREGYWLQDPVYKNSEAGRLVGLAAGVVLRLCEEKDYGAYFVELILDELLQQLYKPAKGEVAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXI--------SGGHRQGRK--SXXXXXXXXXXXXXXXXXXXXXXFAAAALFTCLCKELRLLQRVRALVYDIFLLNGKLASLGPLAAFFHLWPAVLGEKEGVMARALLVCFHEAYKHQRDTLKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATCGVDGETEAKAWVAEMAYEGFSRYVMGRERKNKDADDDGVEAPEELAEEFKAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVRALVLLASVQSLQWMEANVLQEYATGELTTPPGMMRLLAGLAREVTFRDAIERKEGGMLRRLLLCFSEVLAAEDLHPE---------WQEEXXXXXXXXXXXXXXXXXXXXXXATRLWASKGLADLPGVNVGELKPVISWFQSLPAEARDALLPIHLLRTVVYNQQRPHCCAILCSSSAVSSTSSSFPCS-----TSIEQQAEIELQGILHDLSIRVASASVLDQMTHNTLHVAGGRGNR----GVGEKGEGEEMGGGE-DMKRAAWTAEGGWEHVEIWHMFSNSRMDELDYPNKKPSEIVVLEGDVVGSPLLGAELRSLLLELRFRPFPWDVLALSFVLPSGVQKAKHRFKVGTHASALPKEAYVSRRGYVLTHTGASKLTRVWQQYDSVEECFMGEAAAGRIVVLAPGDGRPVIHMSSQDQLRATMRSNL--QMSSYHHRGGKGGGRGEERGHSWGEGRNFGGGRYPLQERQDPPSPGWTP 1070
EGG +T+LEEV LLWGMVKDRPFAESKFTQLALDRYVFCRE+PSLTE KM+ GVERMVLLLREA+ + PQMACHRILVTYKR+M+QALR+DR GYWLQDPVY+N+EAGRL+G+AA VVLRLC+E+DYGAYF+EL+LDELLQQLYK K ++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXI SG G K + XXXXXXXXXX FAAAAL LCKE L R RA+VYD+ LLNG+LA LGPL+AFFH WPAVLG+ +GVMAR LLVCFHEAYKHQRD LK + ++G EA AWVAEMAY+GFSRYVMGR+RK K AD++GVEAPE LAEE K VRALVLLASV L+W E +LQE+ATGEL PPGMMRL+A LAREVTFR A+ERK G M RRLLLCFSE+L AED E XXXXXXXXXXXXXXXXXXXX + +LWASKGLAD+PGVNV ELKPVISW +LP E R+A +P HLLRTV YN+QRPHCCAI+ + + S P + TS EQ A++E+QG+LHDLS+RVAS +VL++MT +TL V+ G+ R G + EG E D+KRA W A+GGWEHV IWHM++NSRMDELDYPNKKPSEIV+LEGDVVGSPL+GAELRS L ELR+RP+PWDVLALSF LP K +HRFK+GTHAS+LPKEAY+SRRGY+LTHTGA+KL+RVWQ+YDSVE+C MGEAAAGR+V+LAPGDGRPVIHMSS D+++A +R + H +GG+GG G +G W G ++RQ+PPSPG+ P
Sbjct: 245 EGGATTLLEEVGLLWGMVKDRPFAESKFTQLALDRYVFCREMPSLTESKMDAGVERMVLLLREASLVPPQMACHRILVTYKRRMAQALRKDRHGYWLQDPVYRNAEAGRLLGVAAAVVLRLCDERDYGAYFMELVLDELLQQLYKVVKDMGSQGRYAGGGEPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGELKERSKSGEIPPGEKGSTRAETDHXXXXXXXXXXRRQRDGFAAAALLVNLCKETGGLGRARAVVYDVCLLNGRLAPLGPLSAFFHSWPAVLGDPDGVMARTLLVCFHEAYKHQRDALKA-----CALARGEGKKGPAPSKPAAEVPMTLAGWGGQAEGPGTKEGSIRAMEGSMEALAWVAEMAYDGFSRYVMGRKRKEKGADEEGVEAPEVLAEELLQKLAVRRVEEGAEVDGSRPVDVERMEAQTEES---VRALVLLASVLPLEWTERRILQEFATGELDVPPGMMRLIASLAREVTFRGAVERKTGDMGRRLLLCFSEMLTAEDTTLEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQSVKLWASKGLADIPGVNVAELKPVISWIATLPWEDRNACVPKHLLRTVQYNRQRPHCCAIVRPFAGGTGRGSGRPLAPVLAPTSSEQLADLEVQGVLHDLSLRVASMAVLNEMTRHTLKVSRGKKARRNMDGRKDGAEGXXXXEEESDLKRATWVADGGWEHVAIWHMYANSRMDELDYPNKKPSEIVILEGDVVGSPLMGAELRSYLTELRYRPYPWDVLALSFSLPGPEVKTRHRFKIGTHASSLPKEAYMSRRGYILTHTGAAKLSRVWQEYDSVEDCLMGEAAAGRLVLLAPGDGRPVIHMSSADKIQANLRIETLGRRRGGHAKGGQGGYGG--KGTPWSYGT-------VAKDRQNPPSPGYVP 1162
The following BLAST results are available for this feature:
Relationships
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO05G04370 ID=NO05G04370|Name=NO05G04370|organism=Nannochloropsis oceanica|type=gene|length=4163bp
CTGTGCTGTTGGAGGGGGGGTGCGTGAGGGTCATTATTCTGTTCTTGCTT
CTTCATAGGGTCTTTGCCGAGACTCCGCCAGCCATGCGCATCGTCTACAG
GCCACGGCATTGTCACCATCTGTTTGACCAGGTCGTTTTGAAGGGCCTGG
AAGGGGAGATGGAAAGGTGCCAAGTGGTTAAGGGGGGGGAAAGGCATCTA
CATGAGCGATCGTGGGAGCGAGAAAAGTCGACTCGATGGTCACATATGAG
ACATGATGCGCATTGTATTTTGCTTGTGGTGTTAGCTCTCAGTCTGTCCT
TCATTCACGCAGCCACTCCCAGACAACCATGATGAGCATTAGCACGGTGT
TGTCATGGAGATTGCGTAAGCGCTGTGATTCTTCAGTGTGGTCCTTGGAT
TTTAGCCTCCCACCCCTTTATGTATTCCTGTCACCACAAAGCCATTCTCA
ACCAACCCCAACAGACAACACCCAGCCCGCACATTACCAAAGACGATGGC
GGGTACCAACGAAGAGCGGTACAAGGCCGCCATGGCCAACGCCGTCAAGA
CTATCAAGTCCCAAAAGGAGCACATTGCTGACTTAGAAAGCAAGCTGGCC
GCCACAGAAGAGCGGGTAGAAGAACTCGAGGACACGCTCGAGGCGCATGG
TCTGCCGGTCCCTGGCAAGCGGAAACGTGCGGACCGCGACGATGCTTGTG
ATGGAAATAGGGCCATGGATGTGGAGGGCGATGGTTGCGGCGGCAGAGGG
GGCAGCGGCAACAAGAAAGCCAAGGCGGCAACGAAGCCTCCCACAGTATg
tcagtctcttcctctgtatcagtgtgtacggcttgaatgtgtgatgttta
cagtcccgagcgtatgctgatccccaatggtttctccccacgaattcttc
tcttgtcgtctctttgtcctctcctccctacctccttgcccactatctgt
cggacaacggaggacgactcacgcccttcctcccacccaccctccttctc
tcccgtccttccacacagAATCCACAAGAGCAAGAATTAACCAAGAGTTT
CAAAGCCACCGATATTTTGAGTCTCAAGAAAAGTACGAGTAAGAGCAGTC
AACGAGAGGCTGCCACCACCAAAAGCATAAGCGCTTCCCAAAGCACCCCT
ACTACCAGTATTGCCAAGAAAGAGAAGCAGAAGGAAGCAGATAAGGAACG
AGAAGAGCAAACCGTTGAGGCTGCAGTCAAAGATCAGCACGAAGGCGATG
GGGACGGAGAGCAAGAAGAAGAAGAGCGAGATGAGGAAGAGGAGGAAGAG
AAGGAAGAAGAATTTGGAGAAGAGCCAGGAGGACGAAAAGGAAGACAAGG
TCAGGAGGGGGAAGGAGGGACATCGACCATCCTAGAGGAAGTAGCTTTGT
TATGGGGCATGGTGAAGGACCGTCCGTTCGCTGAATCGAAGTTTACTCAA
CTGGCGTTGGATCGTTATGTGTTTTGTCGGGAGTTGCCATCGTTGACGGA
GGACAAAATGAATATGGGCGTGGAGCGCATGGTTTTACTGTTACGGGAGG
CGGCACACATTGCGCCGCAGATGGCTTGTCATCGGATTTTGGTCACTTAC
AAGAGGAAGATGTCTCAAGCGCTGAGGAGGGACAGGGAGGGGTATTGGTT
GCAGGACCCAGTATACAAGAATAGCGAGGCGGGGAGGCTGGTGGGGCTGG
CTGCGGGGGTAGTATTGCGGTTGTGTGAAGAGAAAGATTACGGAGCCTAT
TTTGTGGAGTTGATACTGGATGAATTGCTGCAGCAGTTGTACAAGCCAGC
AAAGGGGGAGGTAGCGGAGGGAGGGAAGGAGGGCGGGGACGGGGGTATTG
AGGAGGAGAAGGAAGAGGAGGAAAAGGAGCAAGACGAGGAAGAGGAGGAA
AAGCAGGAAGAGGATAAGGAGCAGAAGGAAGGGAAGGAGGATGGCGATAT
CAGCGGCGGTCACCGGCAAGGGCGAAAGTCACAGACAGAAACGGATCATG
AGAGGGAGAGGGAGAAAGAATTTGCTTTCCGCCGGCAACGTGATGGGTTT
GCGGCTGCTGCATTGTTTACCTGTTTGTGTAAAGAGCTCAGGCTGCTACA
GAGAGTCCGCGCATTGGTGTATGACATCTTTCTGTTGAACGGAAAGCTGG
CGTCACTGGGACCGTTAGCTGCGTTCTTCCATCTGTGGCCGGCGGTGTTG
GGGGAGAAGGAGGGGGTGATGGCGAGGGCCCTGCTGGTTTGTTTTCATGA
GGCGTACAAGCACCAGCGGGATACCCTGAAAGGTGGGAGTAGCAGTAGCA
GCGGCAGTAGAAAGTTGCCTTCTTCCTCCTCCTCCTCATCGGCTGCGGCC
GCTGTCCCCATGACTTTGGCTGTTGCTGATAGTACTGCTACAGCTGCCAC
TGATATTGCTTCTGCTGCCGCTACTTGTGGTGTCGACGGGGAGACGGAGG
CCAAGGCATGGGTGGCTGAGATGGCCTATGAGGGGTTTTCCCGGTATGTG
ATGGGGAGGGAGAGGAAAAACAAGGACGCGGATGACGACGGGGTGGAGGC
TCCGGAGGAGCTCGCGGAAGAATTCAAGGCCAAATTGTTACTCATGGACG
AGGACGAGGACGATGAAGTGGAGGAAGAGGAGGTTGAAGAAGAAGGGAAG
AAGGCGAAAAAGGAAGCGGAGACAGAGGAGCTTGTCCGCGCCTTGGTGCT
GCTGGCGAGTGTGCAGTCTCTGCAGTGGATGGAGGCGAACGTATTGCAGG
AGTACGCTACGGGGGAGCTGACTACCCCACCAGGGATGATGCGGCTCTTA
GCAGGGTTGGCGCGAGAAGTGACTTTTCGAGACGCAATCGAACGGAAGGA
GGGGGGAATGCTGCGCCGCTTGTTATTGTGCTTTTCGGAGGTGCTGGCTG
CTGAGGACCTCCATCCGGAATGGCAGGAGGAGGACCAACCGCAGCACCAG
CAGCACCAGCAGGACAAGGAAGAGCGGAAGCGACGCCGACGGTACCAAGC
AACTCGTCTGTGGGCAAGTAAGGGGTTGGCGGATCTACCGGGGGTGAATG
TGGGTGAGCTCAAGCCTGTCATTTCTTGGTTTCAGTCCCTCCCTGCCGAG
GCACGGGACGCCCTCCTCCCCATCCACCTCCTTCGCACCGTCGTTTACAA
CCAACAGCGCCCGCATTGCTGCGCCATTCTTTGTTCGTCTTCCGCTGTGT
CCTCTACGTCGTCGTCCTTTCCGTGCTCGACTTCGATCGAGCAGCAGGCT
GAGATAGAATTACAAGGTATATTGCACGATTTGTCCATACGCGTGGCTAG
CGCAAGCGTCTTGGATCAGATGACACACAACACACTCCACGTCGCGGGTG
GGAGAGGGAACCGCGGTGTAGGGGAGAAGGGGGAAGGGGAAGAGATGGGT
GGGGGAGAGGATATGAAACGGGCGGCGTGGACGGCTGAGGGCGGGTGGGA
GCATGTGGAGATTTGGCACATGTTTAGTAATAGTCGGATGGATGAGTTGG
ACTACCCCAACAAAAAGCCCTCAGAAATCGTGGTTTTGGAAGGAGACGTT
GTGGGATCTCCTTTGTTGGGGGCGGAGCTCCGATCCTTGTTGTTGGAACT
GCGATTTAGGCCCTTCCCGTGGGATGTGCTTGCCTTGTCGTTTGTCTTGC
CCTCGGGGGTGCAGAAGGCGAAGCATCGATTTAAGGTGGGAACGCATGCA
TCGGCATTACCGAAAGAAGCGTATGTGTCACGAAGAGGATACGTGCTCAC
GCATACGGGAGCCTCGAAATTGACCAGAGTCTGGCAGCAATACGATAGTG
TGGAGGAGTGTTTCATGGGCGAGGCGGCAGCGGGAAGAATTGTCGTATTG
GCGCCTGGGGACGGAAGGCCGGTCATACATATGTCTTCGCAGGATCAGTT
GCGCGCCACCATGCGGAGTAATCTGCAAATGTCCTCTTATCATCATCGCG
GGGGAAAGGGGGGAGGACGGGGGGAAGAGCGGGGACATAGTTGGGGAGAG
GGAAGGAATTTTGGAGGAGGAAGATACCCGTTGCAGGAGCGGCAAGACCC
GCCGTCGCCAGGATGGACGCCTTCGGTTTAATTGAGTGTTTATAGATGAA
AAAGAAGGCAAGGGATGCATCAAGGCAAAAACGAAAAGTAAAAAGGAACA
CACGTCTTGTACT back to topprotein sequence of NO05G04370.1 >NO05G04370.1-protein ID=NO05G04370.1-protein|Name=NO05G04370.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1072bp
MVCRSLASGNVRTATMLVMEIGPWMWRAMVAAAEGAAATRKPRRQRSLPQ
YNPQEQELTKSFKATDILSLKKSTSKSSQREAATTKSISASQSTPTTSIA
KKEKQKEADKEREEQTVEAAVKDQHEGDGDGEQEEEERDEEEEEEKEEEF
GEEPGGRKGRQGQEGEGGTSTILEEVALLWGMVKDRPFAESKFTQLALDR
YVFCRELPSLTEDKMNMGVERMVLLLREAAHIAPQMACHRILVTYKRKMS
QALRRDREGYWLQDPVYKNSEAGRLVGLAAGVVLRLCEEKDYGAYFVELI
LDELLQQLYKPAKGEVAEGGKEGGDGGIEEEKEEEEKEQDEEEEEKQEED
KEQKEGKEDGDISGGHRQGRKSQTETDHEREREKEFAFRRQRDGFAAAAL
FTCLCKELRLLQRVRALVYDIFLLNGKLASLGPLAAFFHLWPAVLGEKEG
VMARALLVCFHEAYKHQRDTLKGGSSSSSGSRKLPSSSSSSSAAAAVPMT
LAVADSTATAATDIASAAATCGVDGETEAKAWVAEMAYEGFSRYVMGRER
KNKDADDDGVEAPEELAEEFKAKLLLMDEDEDDEVEEEEVEEEGKKAKKE
AETEELVRALVLLASVQSLQWMEANVLQEYATGELTTPPGMMRLLAGLAR
EVTFRDAIERKEGGMLRRLLLCFSEVLAAEDLHPEWQEEDQPQHQQHQQD
KEERKRRRRYQATRLWASKGLADLPGVNVGELKPVISWFQSLPAEARDAL
LPIHLLRTVVYNQQRPHCCAILCSSSAVSSTSSSFPCSTSIEQQAEIELQ
GILHDLSIRVASASVLDQMTHNTLHVAGGRGNRGVGEKGEGEEMGGGEDM
KRAAWTAEGGWEHVEIWHMFSNSRMDELDYPNKKPSEIVVLEGDVVGSPL
LGAELRSLLLELRFRPFPWDVLALSFVLPSGVQKAKHRFKVGTHASALPK
EAYVSRRGYVLTHTGASKLTRVWQQYDSVEECFMGEAAAGRIVVLAPGDG
RPVIHMSSQDQLRATMRSNLQMSSYHHRGGKGGGRGEERGHSWGEGRNFG
GGRYPLQERQDPPSPGWTPSV* back to top
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